MD10G1126100.v1.1

Plant mobile domain

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
20609606 .. 20614805
5200 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1126100.v1.1.491

Sequence Viewer

Length: 2817 bp
ATGGCTCCAAAGGGAATAAATGCAGATGGTCAAATTTGTACCCAGCGAGCTGTTGATAAGGTCGGGAAAGAGTTTGCCGCGGGTCTAGGGTATAAGCGTTCTTCTCCATTGGCTTCACTTAACTACAACTTTTCTTTCAGTGATCCCCCTACCTGGTTTCTTCCTTCCAAAGTGAACTCTGGTCATCTTGATTTTATTCCGGAAGATGGTACTATCAAGGTTGGTCGGCATCAGGGCGATTTATTTCAGGCTTATACTCTGATGAAAGTGAATAATGAGGCTGATGGAGACACCAAGTTTAAAGTTGATCCAAATTTTTTTCCGCTTTTACACAGAATGATCCGAGAAAAGACAGATTGGGGTTTGAGTGTGAAGGTCACAGGTTGTGCTACTTTTCAAGTTGGTGTGCTGGAGTGGACAGAGACTATTTTACGAACTTATGCAAGTGTGCTGCGTCAAGCAAATATTTATGGTGCTGTGGCAGTGTCCCGTTATCCTTACAAATACTCCTCTAATGTATGGAAAGCTTTCTGTGAGCTATGGGGGCCTTTAACCAACACCTTCCACCAGGGAAATGGGGAAATGAGCATTTCATTATATGACTTAAAGGTGATAGGTGGTTTACCAATTCTCGGTGCTCCTTATGAAGAGTTTGTTCCTCCAAATGATGACCTGTACAAGAAAGAGGCTTACCCGTCTACTCTTCCTGAACTTTTGAGAATTCATTCCCAATTGTGCAAATTTTATGGGCAGAAACATATATTTTGGAATCAATGGTTGGACCATTTTTATCGAGGAAAAATAGTTTATGCGGGCTATGGTGAGAAAAATCAGCGGATGTCCCCGAATGAGCAAAAGATTTTTAAAGCCCGAGGAATCTTGTTGGAAGTCACAAAAGAAGGGGCCTTGGCTGCATTTTTGGTATTCTGGCTTTGTAGATTTGTTTTGCCATTAAAGGGCGGTAAAGTGAGACCCGAGACTTTTCCCATGGCTTGTTTAATGGCGCAGGGTTCTAAAGTCTCTCTTGCGCCAACTGTTCTTGGCTATATTTATCGCGGCCTTGGGGATATCGTTTCTTGTCCGAGGGGACCTGGCTTCACATATATTTCCATGCCGGTTCACTATATTGTCGGTTGGCTAGGGGAGCATTTTCCATTTTTATACCGATCTCGTCCTGATAGTGATTTTCCTAAGGGTTATCCTCAATTAGCGAGATATGCGGGTATTGAACCCAGGGAGGTCAATATATCTCATGCGAGGTTTATCTTTCGGAGCGACAAATCTGTTATTTATCGCCCAACTGTTTTTGTGGAAGAGAAAGGTTGCTCTTTGATGGATAGTGAAGACCTATCTGATGATTATTTTGAATTTTTGGTCTGTGTTCGCACTGCAAAGCTTCCTGTCAGAATTGGTGAACACCTTTGGCTAGAACCATATTTTCCTAACAGATTTGCTCGTCAATTTGGCTTTGATCAAGGAGTTCCAATGAACAATTTAGCATTTGGTGTTTCTAGTAGACAAAATTGCAGTGTTGAAGCTATGTTCGAAGCGCAGACGGTGCTTCTTAAAAGGAACACCGGATCTCTTTTTTATGTTCCATGTTCAACACATCAAGGGATCTGTACCTATTGGTATTGTAAGTGGTGGAGGACTTCTTGTGTAACATATCTTGGGATTTCTTTGGCTGATATTTATGCTATCTTCAATAAGCGTCCTCTTAATAAAAAGACAGTTTTTAGTGTGTCAGTTCTGAGAGACATAACTCCAGGTTTGAGAAAAGAGTTTTTGCTTTCCGAGGTGGGATTTGATAAGTCTCCTGGCTTGCAAGCAGTTGGTCAGAGTTCTAGCCTTTCTAAAAATAAGAATACAATGGCTGACCAGGAATGCAAGGTTATCTCGGAGTCTTCTTCACCAGGATCTTCTTTAGGGAGTAGCCATGATGTGAATTTTAAGCGTGCTCGTTATGAGAATTCTGATGGTCCTGGTGGTGTGGATATTGAAACTGTGACTGCTGCAGATAATTTTACTCCAGAAATTATCCCTGGAAACTTAAGTACACCATCTGTGAAGGTAACGAACCAGCCTTGTAGGGGAAAGTCAGCTGCCTATCTGTCAAATGAAGTTGCACCATCATCCTTGCAAGAAGTGACGGCATCCATCCATGCTTTGTTTGGCTCGGAGGTGAGCAATTTTAGGCAAGGATATATTATTAGTGAAGTAGAGAATATTTTTGTCAAGCTTTCCTCTTGCAACTCACCTACAGAAATTCTTGGCTGCCATGAGGAAGTGAATTTGGTGCTTGATGTTTTGGTTCCCATCATTAACATTTTGGAATCTGGTCGAACAGAGCTCGAGTGGTTTGTCAAAACCGTTCGCCATATTTTTGCATGTGCTTCACAAATTTCTGATAATGCCAAGATTATTGATCAAGGTAATCATATTCGCGATTTGCTTCATTGTCATGATGAGTGTTTGTCAACTAAGAAGGCCTTCGAGTCCGAGTTAAACAAATCCATTCAGGAGCTTAAGAAAATTGAAGCTGAGGAACTGCCTGTTAAAGAAGCAGAGGAGATCGCTCGTGTTCTTCGCCAGCAATATGATTCTGGAAAACATGCTGTCAAACGTCGAGTGAGTGATCTTAAAGCTTCTATTGAGCGACAAAAGAAATTGGATGTGGAGCTTCGTCAGTCTCGAGCTGATACAAATGAAGGGCTCCTTCCGGATGTTGAGCGTGCTGAAGTTTTGAACAAATCTGCAGAAGAAAGAATCTTGAACTCGATTGCCTCCCTGCTCCACTTTTGCAGTAAACCGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

939

Amino Acids

105.43

Weight (kDa)

7.9

Isoelectric Point (pI)

45.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 156 - 550 5.1e-38 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000253)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28912 FvH4_3g31370 FvH4_3g31371 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_6g28991 FvH4_7g16740 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610
malus_domestica MD10G1126100.v1.1 MD10G1312700.v1.1
rosa_chinensis RchiOBHm_Chr6g0276621
rosa_laevigata RLG00000023327 RLG00000023328
rosa_multiflora Rmu_co8195922.1_g000001 Rmu_co8303105.1_g000001 Rmu_co8385689.1_g000001 Rmu_sc0000385.1_g000010 Rmu_sc0000594.1_g000002 Rmu_sc0000857.1_g000010 Rmu_sc0001016.1_g000053 Rmu_sc0001468.1_g000028 Rmu_sc0001548.1_g000047 Rmu_sc0001548.1_g000048 Rmu_sc0002281.1_g000026 Rmu_sc0002281.1_g000027 Rmu_sc0002281.1_g000028 Rmu_sc0002478.1_g000001 Rmu_sc0002513.1_g000014 Rmu_sc0002662.1_g000017 Rmu_sc0003936.1_g000040 Rmu_sc0004084.1_g000047 Rmu_sc0005529.1_g000005 Rmu_sc0005529.1_g000006 Rmu_sc0005728.1_g000010 Rmu_sc0005747.1_g000017 Rmu_sc0005747.1_g000018 Rmu_sc0006385.1_g000001 Rmu_sc0006550.1_g000019 Rmu_sc0006803.1_g000033 Rmu_sc0007102.1_g000011 Rmu_sc0011018.1_g000001 Rmu_sc0011452.1_g000014 Rmu_sc0011805.1_g000001 Rmu_sc0011805.1_g000002 Rmu_sc0012566.1_g000001 Rmu_sc0013807.1_g000007 Rmu_sc0015817.1_g000001 Rmu_sc0015930.1_g000011 Rmu_sc0018873.1_g000003 Rmu_sc0020929.1_g000001
rosa_roxburghii Rroxscaffold_2G00081310 Rroxscaffold_2G00111790 Rroxscaffold_5G00349530 Rroxscaffold_5G00356270 Rroxscaffold_5G00356280 Rroxscaffold_5G00356290
rosa_rugosa Rorug01G0056400 Rorug01G0056500 Rorug02G0247000 Rorug03G0271700 Rorug04G0157900 Rorug05G0221700 Rorug05G0251400 Rorug05G0251400 Rorug06G0087300 Rorug07G0221900 Rorug07G0221900
rosa_samantha Rh1AG073200 Rh1AG073300 Rh1AG124600 Rh1AG124700 Rh1BG091900 Rh1CG031600 Rh1CG072100 Rh1CG072200 Rh1CG118800 Rh1CG276600 Rh1CG276700 Rh1DG077300 Rh2BG192000 Rh2BG330900 Rh2BG331000 Rh2BG517700 Rh2BG517800 Rh2CG188300 Rh2DG120800 Rh2DG323900 Rh2DG420700 Rh2DG433000 Rh2DG529400 Rh2DG529500 Rh3DG358100 Rh3DG358200 Rh4BG129700 Rh4BG129800 Rh4BG129900 Rh4BG166400 Rh4CG032000 Rh4DG024800 Rh4DG039500 Rh5AG223400 Rh5BG244500 Rh5BG244600 Rh5BG244700 Rh5CG363000 Rh5CG366900 Rh6AG117500 Rh6AG188600 Rh6AG188700 Rh6AG188800 Rh6BG111400 Rh6BG140800 Rh6BG178800 Rh6DG124100 Rh6DG210000 Rh7AG441200 Rh7BG296800 Rh7BG413900 Rh7BG414000 Rh7BG452400 Rh7DG234000 Rh7DG234100
rosa_wichuraiana Rw2G019410 Rw5G042140 Rw7G019590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 698, 1516
AccII CGCG 3 cut(s) 80, 1056, 2445
AccIII TCCGGA 2 cut(s) 199, 2719
AciI CCGC 8 cut(s) 78, 80, 323, 812, 835, 960, 1056, 1220
AclWI GGATC 6 cut(s) 137, 302, 334, 1588, 1625, 1924
AcuI CTGAAG 1 cut(s) 2757
AfaI GTAC 5 cut(s) 40, 211, 677, 1624, 2056
AfiI CCNNNNNNNGG 5 cut(s) 153, 206, 632, 956, 2090
AflII CTTAAG 2 cut(s) 2050, 2525
AjuI GAANNNNNNNTTGG 2 cut(s) 761, 793
Alw21I GWGCWC 3 cut(s) 640, 1960, 2352
Alw26I GTCTC 8 cut(s) 282, 416, 964, 971, 1024, 1749, 1818, 2694
AlwI GGATC 6 cut(s) 137, 302, 334, 1588, 1625, 1924
Ama87I CYCGRG 4 cut(s) 870, 974, 2351, 2691
Aor13HI TCCGGA 2 cut(s) 199, 2719
AoxI GGCC 4 cut(s) 545, 903, 1057, 2487
ApeKI GCWGC 5 cut(s) 451, 911, 2012, 2102, 2274
Asp700I GAANNNNTTC 3 cut(s) 527, 724, 2489
AspLEI GCGC 3 cut(s) 1006, 1030, 1552
AspS9I GGNCC 5 cut(s) 545, 781, 903, 1088, 1979
AsuHPI GGTGA 6 cut(s) 622, 833, 1424, 1902, 2194, 2247
AsuII TTCGAA 1 cut(s) 1545
AvaI CYCGRG 4 cut(s) 870, 974, 2351, 2691
AvaII GGWCC 3 cut(s) 781, 1088, 1979
AxyI CCTNAGG 1 cut(s) 1191
BanII GRGCYC 2 cut(s) 2352, 2715
BauI CACGAG 1 cut(s) 2577
BbsI GAAGAC 2 cut(s) 1350, 1896
Bbv12I GWGCWC 3 cut(s) 640, 1960, 2352
BbvCI CCTCAGC 1 cut(s) 2541
BbvI GCAGC 5 cut(s) 438, 898, 1999, 2089, 2261
BccI CCATC 9 cut(s) 20, 200, 278, 1327, 1970, 2068, 2137, 2165, 2324
BceAI ACGGC 1 cut(s) 2166
BclI TGATCA 2 cut(s) 1471, 2425
BcoDI GTCTC 8 cut(s) 282, 416, 964, 971, 1024, 1749, 1818, 2694
BfaI CTAG 5 cut(s) 86, 1139, 1427, 1512, 1845
BfmI CTRYAG 3 cut(s) 2013, 2259, 2754
BfrI CTTAAG 2 cut(s) 2050, 2525
BisI GCNGC 7 cut(s) 78, 452, 912, 1057, 2013, 2103, 2275
BlsI GCNGC 7 cut(s) 79, 453, 913, 1058, 2014, 2104, 2276
Bme18I GGWCC 3 cut(s) 781, 1088, 1979
BmeT110I CYCGRG 4 cut(s) 870, 974, 2351, 2691
BmgT120I GGNCC 5 cut(s) 545, 781, 903, 1088, 1979
BmiI GGNNCC 6 cut(s) 6, 546, 904, 1089, 2313, 2714
BmsI GCATC 2 cut(s) 238, 2162
BpiI GAAGAC 2 cut(s) 1350, 1896
BpmI CTGGAG 3 cut(s) 431, 1749, 2013
Bpu10I CCTNAGC 1 cut(s) 2541
Bpu14I TTCGAA 1 cut(s) 1545
BsaI GGTCTC 1 cut(s) 964
BsaWI WCCGGW 4 cut(s) 199, 1577, 2719, 2809
BsaXI ACNNNNNCTCC 2 cut(s) 491, 521
Bsc4I CCNNNNNNNGG 5 cut(s) 153, 206, 632, 956, 2090
Bse118I RCCGGY 1 cut(s) 1114
Bse21I CCTNAGG 1 cut(s) 1191
BseAI TCCGGA 2 cut(s) 199, 2719
BseGI GGATG 6 cut(s) 843, 2132, 2153, 2157, 2677, 2728
BseLI CCNNNNNNNGG 5 cut(s) 153, 206, 632, 956, 2090
BseMII CTCAG 2 cut(s) 1742, 2532
BseRI GAGGAG 2 cut(s) 499, 2582
BseXI GCAGC 5 cut(s) 438, 898, 1999, 2089, 2261
BseYI CCCAGC 1 cut(s) 42
Bsh1236I CGCG 3 cut(s) 80, 1056, 2445
BshFI GGCC 4 cut(s) 547, 905, 1059, 2489
BsiHKAI GWGCWC 3 cut(s) 640, 1960, 2352
BsiHKCI CYCGRG 4 cut(s) 870, 974, 2351, 2691
BsiSI CCGG 5 cut(s) 200, 1115, 1578, 2720, 2810
BslFI GGGAC 3 cut(s) 472, 826, 1101
BslI CCNNNNNNNGG 5 cut(s) 153, 206, 632, 956, 2090
BsmAI GTCTC 8 cut(s) 282, 416, 964, 971, 1024, 1749, 1818, 2694
BsmFI GGGAC 3 cut(s) 472, 826, 1101
BsmI GAATGC 1 cut(s) 1889
BsnI GGCC 4 cut(s) 547, 905, 1059, 2489
Bso31I GGTCTC 1 cut(s) 964
BsoBI CYCGRG 4 cut(s) 870, 974, 2351, 2691
Bsp119I TTCGAA 1 cut(s) 1545
Bsp1286I GDGCHC 4 cut(s) 640, 1960, 2352, 2715
Bsp13I TCCGGA 2 cut(s) 199, 2719
Bsp1407I TGTACA 1 cut(s) 675
Bsp19I CCATGG 1 cut(s) 987
Bsp68I TCGCGA 1 cut(s) 2445
BspACI CCGC 8 cut(s) 78, 80, 323, 812, 835, 960, 1056, 1220
BspANI GGCC 4 cut(s) 547, 905, 1059, 2489
BspCNI CTCAG 2 cut(s) 1743, 2533
BspEI TCCGGA 2 cut(s) 199, 2719
BspFNI CGCG 3 cut(s) 80, 1056, 2445
BspHI TCATGA 1 cut(s) 2461
BspLI GGNNCC 6 cut(s) 6, 546, 904, 1089, 2313, 2714
BspMAI CTGCAG 2 cut(s) 2017, 2758
BspPI GGATC 6 cut(s) 137, 302, 334, 1588, 1625, 1924
BspT104I TTCGAA 1 cut(s) 1545
BspTI CTTAAG 2 cut(s) 2050, 2525
BspTNI GGTCTC 1 cut(s) 964
BsrFI RCCGGY 1 cut(s) 1114
BsrGI TGTACA 1 cut(s) 675
BssAI RCCGGY 1 cut(s) 1114
BssSI CACGAG 1 cut(s) 2577
BssT1I CCWWGG 3 cut(s) 906, 987, 1060
Bst2BI CACGAG 1 cut(s) 2577
Bst4CI ACNGT 6 cut(s) 1036, 1303, 1558, 1732, 2005, 2371
Bst6I CTCTTC 3 cut(s) 642, 708, 1308
BstAFI CTTAAG 2 cut(s) 2050, 2525
BstAPI GCANNNNNTGC 1 cut(s) 1558
BstAUI TGTACA 1 cut(s) 675
BstBI TTCGAA 1 cut(s) 1545
BstC8I GCNNGC 7 cut(s) 48, 814, 1823, 1827, 1956, 2591, 2733
BstDEI CTNAG 4 cut(s) 1191, 1751, 2481, 2541
BstDSI CCRYGG 2 cut(s) 78, 987
BstF5I GGATG 6 cut(s) 843, 2132, 2153, 2157, 2677, 2728
BstFNI CGCG 3 cut(s) 80, 1056, 2445
BstHHI GCGC 3 cut(s) 1006, 1030, 1552
BstMAI GTCTC 8 cut(s) 282, 416, 964, 971, 1024, 1749, 1818, 2694
BstMWI GCNNNNNNNGC 5 cut(s) 544, 911, 1144, 1217, 1558
BstNSI RCATGY 2 cut(s) 2391, 2615
BstSFI CTRYAG 3 cut(s) 2013, 2259, 2754
BstUI CGCG 3 cut(s) 80, 1056, 2445
BstV1I GCAGC 5 cut(s) 438, 898, 1999, 2089, 2261
BstV2I GAAGAC 2 cut(s) 1350, 1896
BstX2I RGATCY 3 cut(s) 1580, 1617, 1916
BstXI CCANNNNNNTGG 1 cut(s) 575
BstYI RGATCY 3 cut(s) 1580, 1617, 1916
Bsu36I CCTNAGG 1 cut(s) 1191
BsuRI GGCC 4 cut(s) 547, 905, 1059, 2489
BtgI CCRYGG 2 cut(s) 78, 987
BtsCI GGATG 6 cut(s) 843, 2132, 2153, 2157, 2677, 2728
BtsI GCAGTG 3 cut(s) 489, 1386, 1534
BtsIMutI CAGTG 4 cut(s) 145, 489, 1386, 1534
BtuMI TCGCGA 1 cut(s) 2445
Cac8I GCNNGC 7 cut(s) 48, 814, 1823, 1827, 1956, 2591, 2733
CciI TCATGA 1 cut(s) 2461
CfoI GCGC 3 cut(s) 1006, 1030, 1552
Cfr10I RCCGGY 1 cut(s) 1114
Cfr13I GGNCC 5 cut(s) 545, 781, 903, 1088, 1979
Cfr42I CCGCGG 1 cut(s) 81
CseI GACGC 2 cut(s) 443, 1700
CsiI ACCWGGT 1 cut(s) 152
Csp6I GTAC 5 cut(s) 39, 210, 676, 1623, 2055
CviQI GTAC 5 cut(s) 39, 210, 676, 1623, 2055
DdeI CTNAG 4 cut(s) 1191, 1751, 2481, 2541
DraI TTTAAA 2 cut(s) 301, 865
Eam1104I CTCTTC 3 cut(s) 642, 708, 1308
EarI CTCTTC 3 cut(s) 642, 708, 1308
Ecl136II GAGCTC 1 cut(s) 2350
Eco130I CCWWGG 3 cut(s) 906, 987, 1060
Eco147I AGGCCT 1 cut(s) 2489
Eco24I GRGCYC 2 cut(s) 2352, 2715
Eco31I GGTCTC 1 cut(s) 964
Eco32I GATATC 1 cut(s) 1069
Eco47I GGWCC 3 cut(s) 781, 1088, 1979
Eco53kI GAGCTC 1 cut(s) 2350
Eco57I CTGAAG 1 cut(s) 2757
Eco81I CCTNAGG 1 cut(s) 1191
Eco88I CYCGRG 4 cut(s) 870, 974, 2351, 2691
EcoICRI GAGCTC 1 cut(s) 2350
EcoO109I RGGNCCY 3 cut(s) 545, 903, 1088
EcoRI GAATTC 2 cut(s) 720, 1969
EcoRV GATATC 1 cut(s) 1069
EcoT14I CCWWGG 3 cut(s) 906, 987, 1060
EcoT38I GRGCYC 2 cut(s) 2352, 2715
ErhI CCWWGG 3 cut(s) 906, 987, 1060
FalI AAGNNNNNCTT 6 cut(s) 1008, 1040, 2474, 2506, 2700, 2732
FaqI GGGAC 3 cut(s) 472, 826, 1101
FauI CCCGC 3 cut(s) 73, 805, 1213
FbaI TGATCA 2 cut(s) 1471, 2425
FblI GTMKAC 2 cut(s) 698, 1516
Fnu4HI GCNGC 7 cut(s) 78, 452, 912, 1057, 2013, 2103, 2275
FokI GGATG 6 cut(s) 850, 2119, 2140, 2144, 2684, 2735
FriOI GRGCYC 2 cut(s) 2352, 2715
Fsp4HI GCNGC 7 cut(s) 78, 452, 912, 1057, 2013, 2103, 2275
FspBI CTAG 5 cut(s) 86, 1139, 1427, 1512, 1845
GlaI GCGC 3 cut(s) 1005, 1029, 1551
GluI GCNGC 7 cut(s) 78, 452, 912, 1057, 2013, 2103, 2275
GsaI CCCAGC 1 cut(s) 46
GsuI CTGGAG 3 cut(s) 431, 1749, 2013
HaeIII GGCC 4 cut(s) 547, 905, 1059, 2489
HapII CCGG 5 cut(s) 200, 1115, 1578, 2720, 2810
HgaI GACGC 2 cut(s) 443, 1700
HhaI GCGC 3 cut(s) 1006, 1030, 1552
Hin6I GCGC 3 cut(s) 1004, 1028, 1550
HinP1I GCGC 3 cut(s) 1004, 1028, 1550
HincII GTYRAC 1 cut(s) 2478
HindII GTYRAC 1 cut(s) 2478
HindIII AAGCTT 4 cut(s) 525, 1394, 2237, 2643
HinfI GANTC 7 cut(s) 769, 876, 1901, 2333, 2495, 2600, 2766
HpaII CCGG 5 cut(s) 200, 1115, 1578, 2720, 2810
HphI GGTGA 6 cut(s) 622, 833, 1424, 1902, 2194, 2247
Hpy99I CGWCG 1 cut(s) 2628
HpyAV CCTTC 9 cut(s) 174, 367, 571, 893, 2062, 2479, 2500, 2702, 2726
HpyCH4III ACNGT 6 cut(s) 1036, 1303, 1558, 1732, 2005, 2371
HpyCH4IV ACGT 1 cut(s) 2623
HpyF10VI GCNNNNNNNGC 5 cut(s) 544, 911, 1144, 1217, 1558
HpyF3I CTNAG 4 cut(s) 1191, 1751, 2481, 2541
HpySE526I ACGT 1 cut(s) 2623
HspAI GCGC 3 cut(s) 1004, 1028, 1550
Kpn2I TCCGGA 2 cut(s) 199, 2719
Ksp22I TGATCA 2 cut(s) 1471, 2425
KspI CCGCGG 1 cut(s) 81
LmnI GCTCC 8 cut(s) 10, 643, 1144, 1272, 2521, 2677, 2718, 2796
Lsp1109I GCAGC 5 cut(s) 438, 898, 1999, 2089, 2261
LweI GCATC 2 cut(s) 238, 2162
MabI ACCWGGT 1 cut(s) 152
MaeI CTAG 5 cut(s) 86, 1139, 1427, 1512, 1845
MaeII ACGT 1 cut(s) 2623
MaeIII GTNAC 6 cut(s) 376, 889, 1660, 2005, 2071, 2146
MfeI CAATTG 1 cut(s) 731
MflI RGATCY 3 cut(s) 1580, 1617, 1916
MhlI GDGCHC 4 cut(s) 640, 1960, 2352, 2715
MlyI GAGTC 2 cut(s) 1910, 2504
MmeI TCCRAC 2 cut(s) 759, 864
MroI TCCGGA 2 cut(s) 199, 2719
MroXI GAANNNNTTC 3 cut(s) 527, 724, 2489
MslI CAYNNNNRTG 1 cut(s) 2460
MspA1I CMGCKG 3 cut(s) 80, 835, 2102
MspCI CTTAAG 2 cut(s) 2050, 2525
MspI CCGG 5 cut(s) 200, 1115, 1578, 2720, 2810
MunI CAATTG 1 cut(s) 731
Mva1269I GAATGC 1 cut(s) 1889
MvnI CGCG 3 cut(s) 80, 1056, 2445
MwoI GCNNNNNNNGC 5 cut(s) 544, 911, 1144, 1217, 1558
NcoI CCATGG 1 cut(s) 987
NlaIV GGNNCC 6 cut(s) 6, 546, 904, 1089, 2313, 2714
NmuCI GTSAC 4 cut(s) 376, 889, 2005, 2146
NruI TCGCGA 1 cut(s) 2445
NspI RCATGY 2 cut(s) 2391, 2615
NspV TTCGAA 1 cut(s) 1545
PaeR7I CTCGAG 2 cut(s) 2351, 2691
PagI TCATGA 1 cut(s) 2461
PasI CCCWGGG 1 cut(s) 1233
PceI AGGCCT 1 cut(s) 2489
PcsI WCGNNNNNNNCGW 1 cut(s) 2689
PctI GAATGC 1 cut(s) 1889
PdmI GAANNNNTTC 3 cut(s) 527, 724, 2489
PfeI GAWTC 5 cut(s) 769, 876, 2333, 2600, 2766
PkrI GCNGC 7 cut(s) 79, 453, 913, 1058, 2014, 2104, 2276
PleI GAGTC 2 cut(s) 1909, 2503
PpsI GAGTC 2 cut(s) 1909, 2503
PpuMI RGGWCCY 1 cut(s) 1088
Psp124BI GAGCTC 1 cut(s) 2352
Psp5II RGGWCCY 1 cut(s) 1088
PspFI CCCAGC 1 cut(s) 42
PspN4I GGNNCC 6 cut(s) 6, 546, 904, 1089, 2313, 2714
PspPI GGNCC 5 cut(s) 545, 781, 903, 1088, 1979
PspPPI RGGWCCY 1 cut(s) 1088
PspXI VCTCGAGB 1 cut(s) 2351
PstI CTGCAG 2 cut(s) 2017, 2758
PsuI RGATCY 3 cut(s) 1580, 1617, 1916
PvuII CAGCTG 1 cut(s) 2102
RruI TCGCGA 1 cut(s) 2445
RsaI GTAC 5 cut(s) 40, 211, 677, 1624, 2056
RsaNI GTAC 5 cut(s) 39, 210, 676, 1623, 2055
RseI CAYNNNNRTG 1 cut(s) 2460
SacI GAGCTC 1 cut(s) 2352
SacII CCGCGG 1 cut(s) 81
SatI GCNGC 7 cut(s) 78, 452, 912, 1057, 2013, 2103, 2275
Sau96I GGNCC 5 cut(s) 545, 781, 903, 1088, 1979
SchI GAGTC 2 cut(s) 1910, 2504
SduI GDGCHC 4 cut(s) 640, 1960, 2352, 2715
SexAI ACCWGGT 1 cut(s) 152
SfaNI GCATC 2 cut(s) 238, 2162
SfcI CTRYAG 3 cut(s) 2013, 2259, 2754
Sfr274I CTCGAG 2 cut(s) 2351, 2691
Sfr303I CCGCGG 1 cut(s) 81
SfuI TTCGAA 1 cut(s) 1545
SgrBI CCGCGG 1 cut(s) 81
SinI GGWCC 3 cut(s) 781, 1088, 1979
SlaI CTCGAG 2 cut(s) 2351, 2691
SmiMI CAYNNNNRTG 1 cut(s) 2460
SmlI CTYRAG 4 cut(s) 2050, 2351, 2525, 2691
SmoI CTYRAG 4 cut(s) 2050, 2351, 2525, 2691
SseBI AGGCCT 1 cut(s) 2489
SsiI CCGC 8 cut(s) 78, 80, 323, 812, 835, 960, 1056, 1220
SspI AATATT 2 cut(s) 466, 2227
SspMI CTAG 5 cut(s) 86, 1139, 1427, 1512, 1845
SstI GAGCTC 1 cut(s) 2352
StuI AGGCCT 1 cut(s) 2489
StyI CCWWGG 3 cut(s) 906, 987, 1060
TaaI ACNGT 6 cut(s) 1036, 1303, 1558, 1732, 2005, 2371
TaiI ACGT 1 cut(s) 2626
TaqI TCGA 8 cut(s) 793, 1545, 2341, 2352, 2493, 2626, 2692, 2777
TatI WGTACW 2 cut(s) 675, 2054
TauI GCSGC 2 cut(s) 80, 1059
TfiI GAWTC 5 cut(s) 769, 876, 2333, 2600, 2766
TscAI CASTG 4 cut(s) 145, 489, 1393, 1534
TseFI GTSAC 4 cut(s) 376, 889, 2005, 2146
TseI GCWGC 5 cut(s) 451, 911, 2012, 2102, 2274
Tsp45I GTSAC 4 cut(s) 376, 889, 2005, 2146
TspDTI ATGAA 8 cut(s) 278, 582, 660, 713, 1502, 2133, 2444, 2721
TspRI CASTG 4 cut(s) 145, 489, 1393, 1534
Vha464I CTTAAG 2 cut(s) 2050, 2525
VpaK11BI GGWCC 3 cut(s) 781, 1088, 1979
XceI RCATGY 2 cut(s) 2391, 2615
XcmI CCANNNNNNNNNTGG 2 cut(s) 572, 2168
XhoI CTCGAG 2 cut(s) 2351, 2691
XmiI GTMKAC 2 cut(s) 698, 1516
XmnI GAANNNNTTC 3 cut(s) 527, 724, 2489
XspI CTAG 5 cut(s) 86, 1139, 1427, 1512, 1845
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.