Rmu_sc0002478.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002478.1
OG0000253
Physical Location & Seq
Reverse (-)
2 .. 3346
3345 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002478.1_g000001.1.cds

Sequence Viewer

Length: 2348 bp
atgtggcaaacatttactgctcggcttcattatatgtatgttgtgttccttcaagcacctgggagcaagtttgcagcaacatactctgatagttattgtttaaaggggtgtaaagctttgtctctgtcacttttcatgcgtgtcttcttcttcttcaattattctctccatcagtcttttcgagttcttgacagaggcattgtacatgtacatgctgcaggtgcaagtgaagacaggatctttgacagcgaaagccatttccttgctgggatttggttgttggaagcactccaagagaacgtcaagggtaaattcttttctccagacaccaattttatgttttgtgtggttgatgttctggctggtgtgttctttgcgtggcttattttgaggccatttgttgtgctgaggtggagaggaaggcagagggtaatggatgcacatggacatatatgtactgaacgagcacttaacaagcgcgggcaggaagccatagagggtccagagtataggcggtcttcaccattgcgttccatacaagttgatgcctcagtgaaagacaaaatgacatgggtcagcgaagtgcgagtgcattctgggtatctcacattcagtcatgattctgaagatcaagccataaagacttgccgctcctactgtgctgtatttccagctcgcacccttgagaaagttaataatgaagaggatggagattccttcattcaccaagagaacttttatcctgttctttataaaatgttgagagacaaacaagactggggagttcatctctactttcggggtcgttctacctttgagcctggagtgatggaatggacagaattaatattagatcatttcacggggaagctggaccaggcaggaatatatggtgccgttggtgtttctcgcttcccctatcattattgtgggaacacatggagagcattttgcgaactttggagccctttgactaacaccttacaccatgggaatggagagatgagtgcgtccctttatgatttgaagcttattggtggtcttcccattatgggtgtcccatatgaagaattcattcctgcaaataaagaattacatcgtaatgggagatatccgtataccattgttgaacttctgcgaatacattctgaattgagcgcacccaatagcaagacttatgtttcctggaggcaatggcttgctcatttttatcggggacgcttggtatacgccgcctatggtgagactacatatcggggagatcaaatgcaacaaaatatgttcatgggtagaaaaccagctctggatatttcaaaagaaggagaacttgctgcttttctagcattttggctcagccggggggtcaaggtttctcttgcaccatcagttttaggctatatttatcatggccttggtgagtttgtgactgatccgagagggcctaaagagtctcgaggctgccttcctgttcattacgtgatcggttggttaggagagcactttacttgtttgtatagacgccgagctgcaagtgacatacccgcacgtcaccctcatttggccaggtatgcaggtgttgacgctgagaacttagacattacctctgctagactcgctttcagaagtaatgaatctgttgattatcgtccaagtccatacaatgaacagaaaggttgctttttgcttgatgacaaaagcctgttagatgaacaatttgagttcctagtctgcatacgctctaccttgctacccgtgaggatgggtattgatctttggctggaaccatactacccaaataggtttgcacggcagtttggttttgaccagggagttccatcaaacaagttattatttgctgttgagaaaagaagacagtgttgcattgaagatctagcaaaagcacagcatatacttcttagagctaataccagtgcccgtttttacatcccacgttctacttataatggatcttgcacttggatgtattgtagatggtggatgagggcatgtgctccatatttgggccgatccgtgtctgctgtttatttgaccctaaggaagcaacctttggagaaaagaagtaatgtctttgtgataaaatctttgagagaagtctcttatagtctgcgaaaagaagttttgttgacagatattgaggaagcagattcaaccacccactttaggaaatcttcctctacaggagacaagaaaaggaaaagagattgtaccaggtctgataattcagggggaaggaacctcaagcaagcgcataaagatgaacgtagtgattttgatgatgttattgccgataatgctaacaatcttcagaagaaacatgttctagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

782

Amino Acids

90.25

Weight (kDa)

8.92

Isoelectric Point (pI)

51.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000253)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28912 FvH4_3g31370 FvH4_3g31371 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_6g28991 FvH4_7g16740 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610
malus_domestica MD10G1126100.v1.1 MD10G1312700.v1.1
rosa_chinensis RchiOBHm_Chr6g0276621
rosa_laevigata RLG00000023327 RLG00000023328
rosa_multiflora Rmu_co8195922.1_g000001 Rmu_co8303105.1_g000001 Rmu_co8385689.1_g000001 Rmu_sc0000385.1_g000010 Rmu_sc0000594.1_g000002 Rmu_sc0000857.1_g000010 Rmu_sc0001016.1_g000053 Rmu_sc0001468.1_g000028 Rmu_sc0001548.1_g000047 Rmu_sc0001548.1_g000048 Rmu_sc0002281.1_g000026 Rmu_sc0002281.1_g000027 Rmu_sc0002281.1_g000028 Rmu_sc0002478.1_g000001 Rmu_sc0002513.1_g000014 Rmu_sc0002662.1_g000017 Rmu_sc0003936.1_g000040 Rmu_sc0004084.1_g000047 Rmu_sc0005529.1_g000005 Rmu_sc0005529.1_g000006 Rmu_sc0005728.1_g000010 Rmu_sc0005747.1_g000017 Rmu_sc0005747.1_g000018 Rmu_sc0006385.1_g000001 Rmu_sc0006550.1_g000019 Rmu_sc0006803.1_g000033 Rmu_sc0007102.1_g000011 Rmu_sc0011018.1_g000001 Rmu_sc0011452.1_g000014 Rmu_sc0011805.1_g000001 Rmu_sc0011805.1_g000002 Rmu_sc0012566.1_g000001 Rmu_sc0013807.1_g000007 Rmu_sc0015817.1_g000001 Rmu_sc0015930.1_g000011 Rmu_sc0018873.1_g000003 Rmu_sc0020929.1_g000001
rosa_roxburghii Rroxscaffold_2G00081310 Rroxscaffold_2G00111790 Rroxscaffold_5G00349530 Rroxscaffold_5G00356270 Rroxscaffold_5G00356280 Rroxscaffold_5G00356290
rosa_rugosa Rorug01G0056400 Rorug01G0056500 Rorug02G0247000 Rorug03G0271700 Rorug04G0157900 Rorug05G0221700 Rorug05G0251400 Rorug05G0251400 Rorug06G0087300 Rorug07G0221900 Rorug07G0221900
rosa_samantha Rh1AG073200 Rh1AG073300 Rh1AG124600 Rh1AG124700 Rh1BG091900 Rh1CG031600 Rh1CG072100 Rh1CG072200 Rh1CG118800 Rh1CG276600 Rh1CG276700 Rh1DG077300 Rh2BG192000 Rh2BG330900 Rh2BG331000 Rh2BG517700 Rh2BG517800 Rh2CG188300 Rh2DG120800 Rh2DG323900 Rh2DG420700 Rh2DG433000 Rh2DG529400 Rh2DG529500 Rh3DG358100 Rh3DG358200 Rh4BG129700 Rh4BG129800 Rh4BG129900 Rh4BG166400 Rh4CG032000 Rh4DG024800 Rh4DG039500 Rh5AG223400 Rh5BG244500 Rh5BG244600 Rh5BG244700 Rh5CG363000 Rh5CG366900 Rh6AG117500 Rh6AG188600 Rh6AG188700 Rh6AG188800 Rh6BG111400 Rh6BG140800 Rh6BG178800 Rh6DG124100 Rh6DG210000 Rh7AG441200 Rh7BG296800 Rh7BG413900 Rh7BG414000 Rh7BG452400 Rh7DG234000 Rh7DG234100
rosa_wichuraiana Rw2G019410 Rw5G042140 Rw7G019590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 753, 1962
AarI CACCTGC 2 cut(s) 209, 1562
Acc36I ACCTGC 2 cut(s) 209, 1562
AccB1I GGYRCC 1 cut(s) 893
AccBSI CCGCTC 1 cut(s) 651
AccI GTMKAC 2 cut(s) 1118, 1227
AccII CGCG 1 cut(s) 480
AciI CCGC 5 cut(s) 480, 514, 649, 1233, 1542
AclWI GGATC 4 cut(s) 245, 1424, 1975, 2022
AcoI YGGCCR 1 cut(s) 1560
AcsI RAATTY 2 cut(s) 311, 1070
AcuI CTGAAG 2 cut(s) 645, 2309
AcyI GRCGYC 1 cut(s) 1519
AfaI GTAC 4 cut(s) 204, 210, 457, 2227
AfiI CCNNNNNNNGG 4 cut(s) 1052, 1558, 2021, 2181
AflIII ACRYGT 2 cut(s) 205, 2335
AgsI TTSAA 7 cut(s) 53, 157, 1027, 1130, 1314, 1886, 2169
AjiI CACGTC 1 cut(s) 1547
AjnI CCWGG 7 cut(s) 58, 820, 876, 1184, 1562, 1824, 2228
AjuI GAANNNNNNNTTGG 2 cut(s) 2051, 2083
AluBI AGCT 7 cut(s) 116, 674, 871, 1030, 1301, 1526, 1922
AluI AGCT 7 cut(s) 116, 674, 871, 1030, 1301, 1526, 1922
Alw21I GWGCWC 3 cut(s) 469, 1500, 2014
Alw26I GTCTC 6 cut(s) 126, 759, 1238, 1455, 2119, 2196
AlwI GGATC 4 cut(s) 245, 1424, 1975, 2022
Ama87I CYCGRG 1 cut(s) 1452
AoxI GGCC 5 cut(s) 392, 1408, 1439, 1560, 2023
ApeKI GCWGC 5 cut(s) 74, 215, 1331, 1458, 1526
ApoI RAATTY 2 cut(s) 311, 1070
ArsI GACNNNNNNTTYG 2 cut(s) 224, 256
AseI ATTAAT 1 cut(s) 845
Asp700I GAANNNNTTC 2 cut(s) 1074, 1144
AspLEI GCGC 3 cut(s) 480, 1160, 2269
AspS9I GGNCC 4 cut(s) 500, 874, 1439, 2023
AsuC2I CCSGG 1 cut(s) 1358
AsuHPI GGTGA 5 cut(s) 513, 716, 1253, 1427, 1541
AvaI CYCGRG 1 cut(s) 1452
AvaII GGWCC 2 cut(s) 500, 874
AxyI CCTNAGG 1 cut(s) 2054
BaeGI GKGCMC 1 cut(s) 1936
BalI TGGCCA 1 cut(s) 1562
BanI GGYRCC 1 cut(s) 893
BanII GRGCYC 1 cut(s) 968
BbsI GAAGAC 5 cut(s) 136, 237, 510, 1034, 1876
Bbv12I GWGCWC 3 cut(s) 469, 1500, 2014
BbvCI CCTCAGC 1 cut(s) 407
BbvI GCAGC 5 cut(s) 86, 202, 1318, 1445, 1513
BccI CCATC 7 cut(s) 177, 701, 823, 1390, 1753, 1843, 1986
BceAI ACGGC 2 cut(s) 881, 1823
BciT130I CCWGG 7 cut(s) 60, 822, 878, 1186, 1564, 1826, 2230
BcnI CCSGG 1 cut(s) 1358
BcoDI GTCTC 6 cut(s) 126, 759, 1238, 1455, 2119, 2196
BfaI CTAG 5 cut(s) 1340, 1608, 1724, 1892, 2342
BfmI CTRYAG 2 cut(s) 216, 2196
BfuAI ACCTGC 2 cut(s) 209, 1562
BglII AGATCT 1 cut(s) 1888
BisI GCNGC 7 cut(s) 75, 216, 649, 1233, 1332, 1459, 1527
BlpI GCTNAGC 1 cut(s) 1352
BlsI GCNGC 7 cut(s) 76, 217, 650, 1234, 1333, 1460, 1528
Bme1390I CCNGG 8 cut(s) 60, 822, 878, 1186, 1358, 1564, 1826, 2230
Bme18I GGWCC 2 cut(s) 500, 874
BmeT110I CYCGRG 1 cut(s) 1452
BmgBI CACGTC 1 cut(s) 1547
BmgT120I GGNCC 4 cut(s) 500, 874, 1439, 2023
BmiI GGNNCC 5 cut(s) 501, 895, 965, 1782, 2255
BmrFI CCNGG 8 cut(s) 60, 822, 878, 1186, 1358, 1564, 1826, 2230
BmrI ACTGGG 1 cut(s) 787
BmsI GCATC 2 cut(s) 427, 535
BmuI ACTGGG 1 cut(s) 787
BoxI GACNNNNGTC 1 cut(s) 572
BpiI GAAGAC 5 cut(s) 136, 237, 510, 1034, 1876
BplI GAGNNNNNCTC 2 cut(s) 774, 806
BpmI CTGGAG 3 cut(s) 306, 843, 1207
Bpu10I CCTNAGC 1 cut(s) 407
Bpu1102I GCTNAGC 1 cut(s) 1352
BpuEI CTTGAG 2 cut(s) 704, 2243
BpuMI CCSGG 1 cut(s) 1358
BsaAI YACGTR 1 cut(s) 1477
BsaHI GRCGYC 1 cut(s) 1519
BsaJI CCNNGG 5 cut(s) 59, 988, 1357, 1411, 1825
Bsc4I CCNNNNNNNGG 4 cut(s) 1052, 1558, 2021, 2181
Bse1I ACTGG 2 cut(s) 782, 1929
Bse21I CCTNAGG 1 cut(s) 2054
Bse3DI GCAATG 2 cut(s) 524, 1199
BseBI CCWGG 7 cut(s) 60, 822, 878, 1186, 1564, 1826, 2230
BseDI CCNNGG 5 cut(s) 59, 988, 1357, 1411, 1825
BseGI GGATG 6 cut(s) 442, 712, 1764, 1944, 1986, 2004
BseLI CCNNNNNNNGG 4 cut(s) 1052, 1558, 2021, 2181
BseMI GCAATG 2 cut(s) 524, 1199
BseMII CTCAG 4 cut(s) 398, 564, 1366, 1575
BseNI ACTGG 2 cut(s) 782, 1929
BseSI GKGCMC 1 cut(s) 1936
BseXI GCAGC 5 cut(s) 86, 202, 1318, 1445, 1513
BseYI CCCAGC 1 cut(s) 266
Bsh1236I CGCG 1 cut(s) 480
BshFI GGCC 5 cut(s) 394, 1410, 1441, 1562, 2025
BshNI GGYRCC 1 cut(s) 893
BsiHKAI GWGCWC 3 cut(s) 469, 1500, 2014
BsiHKCI CYCGRG 1 cut(s) 1452
BsiSI CCGG 1 cut(s) 1357
BslFI GGGAC 3 cut(s) 997, 1043, 1230
BslI CCNNNNNNNGG 4 cut(s) 1052, 1558, 2021, 2181
BsmAI GTCTC 6 cut(s) 126, 759, 1238, 1455, 2119, 2196
BsmFI GGGAC 3 cut(s) 997, 1043, 1230
BsmI GAATGC 1 cut(s) 592
BsnI GGCC 5 cut(s) 394, 1410, 1441, 1562, 2025
BsoBI CYCGRG 1 cut(s) 1452
Bsp1286I GDGCHC 5 cut(s) 469, 968, 1500, 1936, 2014
Bsp1407I TGTACA 2 cut(s) 202, 208
Bsp1720I GCTNAGC 1 cut(s) 1352
Bsp19I CCATGG 1 cut(s) 988
BspACI CCGC 5 cut(s) 480, 514, 649, 1233, 1542
BspANI GGCC 5 cut(s) 394, 1410, 1441, 1562, 2025
BspCNI CTCAG 4 cut(s) 399, 563, 1365, 1576
BspFNI CGCG 1 cut(s) 480
BspHI TCATGA 1 cut(s) 616
BspLI GGNNCC 5 cut(s) 501, 895, 965, 1782, 2255
BspMAI CTGCAG 1 cut(s) 220
BspMI ACCTGC 2 cut(s) 209, 1562
BspPI GGATC 4 cut(s) 245, 1424, 1975, 2022
BspT107I GGYRCC 1 cut(s) 893
BsrBI CCGCTC 1 cut(s) 651
BsrDI GCAATG 2 cut(s) 524, 1199
BsrGI TGTACA 2 cut(s) 202, 208
BsrI ACTGG 2 cut(s) 782, 1929
BssECI CCNNGG 5 cut(s) 59, 988, 1357, 1411, 1825
BssNAI GTATAC 2 cut(s) 1119, 1228
BssNI GRCGYC 1 cut(s) 1519
BssT1I CCWWGG 2 cut(s) 988, 1411
Bst1107I GTATAC 2 cut(s) 1119, 1228
Bst2UI CCWGG 7 cut(s) 60, 822, 878, 1186, 1564, 1826, 2230
Bst4CI ACNGT 2 cut(s) 659, 1875
Bst6I CTCTTC 1 cut(s) 696
BstACI GRCGYC 1 cut(s) 1519
BstAUI TGTACA 2 cut(s) 202, 208
BstBAI YACGTR 1 cut(s) 1477
BstC8I GCNNGC 4 cut(s) 482, 676, 1200, 2265
BstDEI CTNAG 7 cut(s) 407, 550, 1352, 1584, 1591, 1916, 2054
BstDSI CCRYGG 1 cut(s) 988
BstF5I GGATG 6 cut(s) 442, 712, 1764, 1944, 1986, 2004
BstFNI CGCG 1 cut(s) 480
BstHHI GCGC 3 cut(s) 480, 1160, 2269
BstMAI GTCTC 6 cut(s) 126, 759, 1238, 1455, 2119, 2196
BstMWI GCNNNNNNNGC 5 cut(s) 221, 1340, 1568, 1613, 2312
BstNI CCWGG 7 cut(s) 60, 822, 878, 1186, 1564, 1826, 2230
BstNSI RCATGY 4 cut(s) 209, 215, 2010, 2339
BstPAI GACNNNNGTC 1 cut(s) 572
BstSCI CCNGG 8 cut(s) 58, 820, 876, 1184, 1356, 1562, 1824, 2228
BstSFI CTRYAG 2 cut(s) 216, 2196
BstSLI GKGCMC 1 cut(s) 1936
BstUI CGCG 1 cut(s) 480
BstV1I GCAGC 5 cut(s) 86, 202, 1318, 1445, 1513
BstV2I GAAGAC 5 cut(s) 136, 237, 510, 1034, 1876
BstX2I RGATCY 3 cut(s) 237, 1888, 1967
BstXI CCANNNNNNTGG 1 cut(s) 995
BstYI RGATCY 3 cut(s) 237, 1888, 1967
BstZ17I GTATAC 2 cut(s) 1119, 1228
Bsu36I CCTNAGG 1 cut(s) 2054
BsuRI GGCC 5 cut(s) 394, 1410, 1441, 1562, 2025
BtgI CCRYGG 1 cut(s) 988
BtrI CACGTC 1 cut(s) 1547
BtsCI GGATG 6 cut(s) 442, 712, 1764, 1944, 1986, 2004
BtsIMutI CAGTG 3 cut(s) 558, 1880, 1936
BveI ACCTGC 2 cut(s) 209, 1562
Cac8I GCNNGC 4 cut(s) 482, 676, 1200, 2265
CciI TCATGA 1 cut(s) 616
CfoI GCGC 3 cut(s) 480, 1160, 2269
Cfr13I GGNCC 4 cut(s) 500, 874, 1439, 2023
CseI GACGC 4 cut(s) 999, 1227, 1527, 1589
CsiI ACCWGGT 1 cut(s) 2228
Csp6I GTAC 4 cut(s) 203, 209, 456, 2226
CviQI GTAC 4 cut(s) 203, 209, 456, 2226
DdeI CTNAG 7 cut(s) 407, 550, 1352, 1584, 1591, 1916, 2054
DraI TTTAAA 1 cut(s) 102
EaeI YGGCCR 1 cut(s) 1560
Eam1104I CTCTTC 1 cut(s) 696
EarI CTCTTC 1 cut(s) 696
Eco130I CCWWGG 2 cut(s) 988, 1411
Eco24I GRGCYC 1 cut(s) 968
Eco32I GATATC 1 cut(s) 1112
Eco47I GGWCC 2 cut(s) 500, 874
Eco57I CTGAAG 2 cut(s) 645, 2309
Eco81I CCTNAGG 1 cut(s) 2054
Eco88I CYCGRG 1 cut(s) 1452
EcoO109I RGGNCCY 1 cut(s) 1439
EcoRI GAATTC 1 cut(s) 1070
EcoRII CCWGG 7 cut(s) 58, 820, 876, 1184, 1562, 1824, 2228
EcoRV GATATC 1 cut(s) 1112
EcoT14I CCWWGG 2 cut(s) 988, 1411
EcoT38I GRGCYC 1 cut(s) 968
ErhI CCWWGG 2 cut(s) 988, 1411
FalI AAGNNNNNCTT 2 cut(s) 1311, 1343
FaqI GGGAC 3 cut(s) 997, 1043, 1230
FauI CCCGC 2 cut(s) 473, 1549
FauNDI CATATG 1 cut(s) 1063
FblI GTMKAC 2 cut(s) 1118, 1227
Fnu4HI GCNGC 7 cut(s) 75, 216, 649, 1233, 1332, 1459, 1527
FokI GGATG 6 cut(s) 449, 719, 1771, 1931, 1993, 2011
FriOI GRGCYC 1 cut(s) 968
Fsp4HI GCNGC 7 cut(s) 75, 216, 649, 1233, 1332, 1459, 1527
FspBI CTAG 5 cut(s) 1340, 1608, 1724, 1892, 2342
GlaI GCGC 3 cut(s) 479, 1159, 2268
GluI GCNGC 7 cut(s) 75, 216, 649, 1233, 1332, 1459, 1527
GsaI CCCAGC 1 cut(s) 270
GsuI CTGGAG 3 cut(s) 306, 843, 1207
HaeIII GGCC 5 cut(s) 394, 1410, 1441, 1562, 2025
HapII CCGG 1 cut(s) 1357
HgaI GACGC 4 cut(s) 999, 1227, 1527, 1589
HhaI GCGC 3 cut(s) 480, 1160, 2269
Hin1I GRCGYC 1 cut(s) 1519
Hin6I GCGC 3 cut(s) 478, 1158, 2267
HinP1I GCGC 3 cut(s) 478, 1158, 2267
HincII GTYRAC 2 cut(s) 1579, 2145
HindII GTYRAC 2 cut(s) 1579, 2145
HindIII AAGCTT 2 cut(s) 114, 1028
HinfI GANTC 6 cut(s) 620, 713, 1448, 1611, 1631, 2165
HpaII CCGG 1 cut(s) 1357
HphI GGTGA 5 cut(s) 513, 716, 1253, 1427, 1541
Hpy166II GTNNAC 4 cut(s) 1119, 1228, 1579, 2145
Hpy188I TCNGA 7 cut(s) 88, 625, 1150, 1434, 1622, 2236, 2328
Hpy188III TCNNGA 7 cut(s) 188, 323, 503, 617, 1304, 1452, 2342
Hpy8I GTNNAC 4 cut(s) 1119, 1228, 1579, 2145
HpyAV CCTTC 6 cut(s) 59, 414, 727, 1313, 1472, 2244
HpyCH4III ACNGT 2 cut(s) 659, 1875
HpyCH4IV ACGT 5 cut(s) 300, 1476, 1546, 1951, 2281
HpyF10VI GCNNNNNNNGC 5 cut(s) 221, 1340, 1568, 1613, 2312
HpyF3I CTNAG 7 cut(s) 407, 550, 1352, 1584, 1591, 1916, 2054
HpySE526I ACGT 5 cut(s) 300, 1476, 1546, 1951, 2281
Hsp92I GRCGYC 1 cut(s) 1519
HspAI GCGC 3 cut(s) 478, 1158, 2267
LmnI GCTCC 4 cut(s) 63, 656, 963, 2017
Lsp1109I GCAGC 5 cut(s) 86, 202, 1318, 1445, 1513
LweI GCATC 2 cut(s) 427, 535
MabI ACCWGGT 1 cut(s) 2228
MaeI CTAG 5 cut(s) 1340, 1608, 1724, 1892, 2342
MaeII ACGT 5 cut(s) 300, 1476, 1546, 1951, 2281
MaeIII GTNAC 4 cut(s) 126, 1423, 1532, 1547
MbiI CCGCTC 1 cut(s) 651
MflI RGATCY 3 cut(s) 237, 1888, 1967
MhlI GDGCHC 5 cut(s) 469, 968, 1500, 1936, 2014
MlsI TGGCCA 1 cut(s) 1562
MluCI AATT 9 cut(s) 157, 311, 331, 842, 1070, 1091, 1151, 1712, 2239
MluNI TGGCCA 1 cut(s) 1562
MlyI GAGTC 2 cut(s) 1457, 1605
MmeI TCCRAC 1 cut(s) 261
Mox20I TGGCCA 1 cut(s) 1562
MroXI GAANNNNTTC 2 cut(s) 1074, 1144
MscI TGGCCA 1 cut(s) 1562
MseI TTAA 4 cut(s) 101, 471, 693, 845
MslI CAYNNNNRTG 6 cut(s) 210, 927, 993, 1101, 1979, 2274
Msp20I TGGCCA 1 cut(s) 1562
MspI CCGG 1 cut(s) 1357
MspR9I CCNGG 8 cut(s) 60, 822, 878, 1186, 1358, 1564, 1826, 2230
Mva1269I GAATGC 1 cut(s) 592
MvaI CCWGG 7 cut(s) 60, 822, 878, 1186, 1564, 1826, 2230
MvnI CGCG 1 cut(s) 480
MwoI GCNNNNNNNGC 5 cut(s) 221, 1340, 1568, 1613, 2312
NciI CCSGG 1 cut(s) 1358
NcoI CCATGG 1 cut(s) 988
NdeI CATATG 1 cut(s) 1063
NlaIV GGNNCC 5 cut(s) 501, 895, 965, 1782, 2255
NmeAIII GCCGAG 1 cut(s) 1547
NmuCI GTSAC 4 cut(s) 126, 1423, 1532, 1547
NspI RCATGY 4 cut(s) 209, 215, 2010, 2339
PaeR7I CTCGAG 1 cut(s) 1452
PagI TCATGA 1 cut(s) 616
PaqCI CACCTGC 2 cut(s) 209, 1562
PciI ACATGT 2 cut(s) 205, 2335
PctI GAATGC 1 cut(s) 592
PdmI GAANNNNTTC 2 cut(s) 1074, 1144
PfeI GAWTC 4 cut(s) 620, 713, 1631, 2165
PfoI TCCNGGA 1 cut(s) 1184
PkrI GCNGC 7 cut(s) 76, 217, 650, 1234, 1333, 1460, 1528
PleI GAGTC 2 cut(s) 1456, 1605
PpsI GAGTC 2 cut(s) 1456, 1605
Ppu21I YACGTR 1 cut(s) 1477
PscI ACATGT 2 cut(s) 205, 2335
PshAI GACNNNNGTC 1 cut(s) 572
PshBI ATTAAT 1 cut(s) 845
PsiI TTATAA 2 cut(s) 753, 1962
Psp6I CCWGG 7 cut(s) 58, 820, 876, 1184, 1562, 1824, 2228
PspFI CCCAGC 1 cut(s) 266
PspGI CCWGG 7 cut(s) 58, 820, 876, 1184, 1562, 1824, 2228
PspN4I GGNNCC 5 cut(s) 501, 895, 965, 1782, 2255
PspPI GGNCC 4 cut(s) 500, 874, 1439, 2023
PsrI GAACNNNNNNTAC 2 cut(s) 29, 61
PstI CTGCAG 1 cut(s) 220
PsuI RGATCY 3 cut(s) 237, 1888, 1967
RsaI GTAC 4 cut(s) 204, 210, 457, 2227
RsaNI GTAC 4 cut(s) 203, 209, 456, 2226
RseI CAYNNNNRTG 6 cut(s) 210, 927, 993, 1101, 1979, 2274
SaqAI TTAA 4 cut(s) 101, 471, 693, 845
SatI GCNGC 7 cut(s) 75, 216, 649, 1233, 1332, 1459, 1527
Sau96I GGNCC 4 cut(s) 500, 874, 1439, 2023
SchI GAGTC 2 cut(s) 1457, 1605
ScrFI CCNGG 8 cut(s) 60, 822, 878, 1186, 1358, 1564, 1826, 2230
SduI GDGCHC 5 cut(s) 469, 968, 1500, 1936, 2014
SexAI ACCWGGT 1 cut(s) 2228
SfaNI GCATC 2 cut(s) 427, 535
SfcI CTRYAG 2 cut(s) 216, 2196
Sfr274I CTCGAG 1 cut(s) 1452
SinI GGWCC 2 cut(s) 500, 874
SlaI CTCGAG 1 cut(s) 1452
SmiMI CAYNNNNRTG 6 cut(s) 210, 927, 993, 1101, 1979, 2274
SmlI CTYRAG 3 cut(s) 683, 1452, 2258
SmoI CTYRAG 3 cut(s) 683, 1452, 2258
Sse9I AATT 9 cut(s) 157, 311, 331, 842, 1070, 1091, 1151, 1712, 2239
SsiI CCGC 5 cut(s) 480, 514, 649, 1233, 1542
SspI AATATT 1 cut(s) 849
SspMI CTAG 5 cut(s) 1340, 1608, 1724, 1892, 2342
StyD4I CCNGG 8 cut(s) 58, 820, 876, 1184, 1356, 1562, 1824, 2228
StyI CCWWGG 2 cut(s) 988, 1411
TaaI ACNGT 2 cut(s) 659, 1875
TaiI ACGT 5 cut(s) 303, 1479, 1549, 1954, 2284
TaqI TCGA 2 cut(s) 181, 1453
TasI AATT 9 cut(s) 157, 311, 331, 842, 1070, 1091, 1151, 1712, 2239
TatI WGTACW 3 cut(s) 202, 208, 455
TauI GCSGC 2 cut(s) 651, 1235
TfiI GAWTC 4 cut(s) 620, 713, 1631, 2165
Tru1I TTAA 4 cut(s) 101, 471, 693, 845
Tru9I TTAA 4 cut(s) 101, 471, 693, 845
TscAI CASTG 3 cut(s) 558, 1880, 1936
TseFI GTSAC 4 cut(s) 126, 1423, 1532, 1547
TseI GCWGC 5 cut(s) 74, 215, 1331, 1458, 1526
Tsp45I GTSAC 4 cut(s) 126, 1423, 1532, 1547
TspGWI ACGGA 2 cut(s) 1104, 2020
TspRI CASTG 3 cut(s) 558, 1880, 1936
VpaK11BI GGWCC 2 cut(s) 500, 874
VspI ATTAAT 1 cut(s) 845
XapI RAATTY 2 cut(s) 311, 1070
XbaI TCTAGA 1 cut(s) 2341
XceI RCATGY 4 cut(s) 209, 215, 2010, 2339
XcmI CCANNNNNNNNNTGG 1 cut(s) 263
XhoI CTCGAG 1 cut(s) 1452
XmiI GTMKAC 2 cut(s) 1118, 1227
XmnI GAANNNNTTC 2 cut(s) 1074, 1144
XspI CTAG 5 cut(s) 1340, 1608, 1724, 1892, 2342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.