Rmu_sc0006385.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006385.1
OG0000253
Physical Location & Seq
Forward (+)
1 .. 2332
2332 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006385.1_g000001.1.cds

Sequence Viewer

Length: 2332 bp
gacattagacaaagctggtatcttcggtgcagttgctgtttcccgttatccgtatgagtattgcagtaatgtgtggagggcattttgtgagctgtgggggcctttaacaaacacttttcaccatgcagatggggaaatgagcatctctttgcatgatttgaatgttattggaggattgccggtttcaggagaaccatacgaagaattcattcctccaaacaaagacctggtgaaggttgaattataccattctacagttgcagagctcttgaggatttatacctatctgtgcgctacttacaaaagcagatatgtctactggccatggtggatagaacatttttatcgtggggagataatttacggagcctatggtgaatgtaagaattctggggttccgaaattgagagaaccaaagtttgagttgaagatttcaaagcaaggaagactggctgcattcctcgcgttctggcttagcaggttcgttctcccttccaacagtaagaagataaggcctgagactttctatatggcctctttgatggcacagggcatcagagtatctcttgcacccacagtactgggttatgtgtaccatggtcttggtgagatggctacccactctgctggtcctggctcttccaactcttgtttgcctatccactacgtcattggctggctcggagaatattttccttatctgtactcatcacgctctgataaagaattcctaggagggtatcctcgtttggccaggtatgcaggtattcaaggcaggagtctaagcatcacagaggctcgtatggttttcaggaccaataaatctgtcgtgcatcgccctatctccgtagcctgtgaaaaagaccgttttttgcttgatgacgacaaactgcctgatgtgttatttgaggtcctcatctgtatgcgttctgcagtgcttcctgtgcgagttggcgagggtcttttccttgagccctattatccaaacaggtttgctcgtcaatttggtcttgatcagagtgttccctctaacaaactatcctttagtgtgtctaaaaggcagcaatgtggtgttgaggatctgctgagggcacagactatcctgtataggaagaacactacctctcgtttctttgtcccacgttcttctcgttctggacagtgtacgtggtggtactgcaggtggtggtcaagagcttgtactccttacttgggactatcggtgtccaaaaccttcatgactttgaataagcgccctcctgaaaagccacaacatgttttcgtcgtgcagaacttgagagaaatttctactggtttgaaacaagaggttaaaatctcagaggtggaaaagtctcttgggaaatcttctagaaagacacctcgaaaatctcgtgatggagcttcttgttctaagaccagcagggctcgtcccacagatgaatgtggtgggcacaaaagagttaggcttgaaaaggtagttgaagagactgtcgttatcccagtgaagtcttcttcaaatggtgagcgtgagttggatgttcatagtcctttgagaatggaagctctaaatccggtcattgagaatgaagcggttatgccaaccatctgtttgagtgaagcttcttcaaaccaggctctgtcaccattgtcaaatctggagaactccatatctaatttgcttggttcagaactgccgtccttcaagaagaattacctcattgctcaggttgtagacatttacgctaaagtttcttcatcttcgacgccaaaggagttgttagtccatgttttggacattagatcaagtcttgacatgcttcgccctgcaattaagcctctaaaagctggaaagctacaactcgaagcgttcgtaactgctattgagaagatgttagaggtggcagaccagtcgttaaatactaccgaggtccttgagcagagaactaccatggatgttgaacttgaggagtgtgagatatccaagggaagtgtagagtctcagcttgtgggatcttccaaagagcttgaagccttgaaagccacggaatctgatatcatagcggatgagcagcgtgttcagaagaggcgatcagaatataatgctaagagaaaatctcttgaagacactctgcaggcattgaaggattccttgaaagagcatgatgaaagaggccaaaagcttcaagaagacagagctgcttatatggcggagaaacttcctgagattgagaaggcttcggcttcgtataagttggaaacaaaggcgtatcagagcctgtttgattctttgttcccattattccatgtatgcaccacctcagtacagacttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

776

Amino Acids

87.76

Weight (kDa)

8.74

Isoelectric Point (pI)

52.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000253)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28912 FvH4_3g31370 FvH4_3g31371 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_6g28991 FvH4_7g16740 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610
malus_domestica MD10G1126100.v1.1 MD10G1312700.v1.1
rosa_chinensis RchiOBHm_Chr6g0276621
rosa_laevigata RLG00000023327 RLG00000023328
rosa_multiflora Rmu_co8195922.1_g000001 Rmu_co8303105.1_g000001 Rmu_co8385689.1_g000001 Rmu_sc0000385.1_g000010 Rmu_sc0000594.1_g000002 Rmu_sc0000857.1_g000010 Rmu_sc0001016.1_g000053 Rmu_sc0001468.1_g000028 Rmu_sc0001548.1_g000047 Rmu_sc0001548.1_g000048 Rmu_sc0002281.1_g000026 Rmu_sc0002281.1_g000027 Rmu_sc0002281.1_g000028 Rmu_sc0002478.1_g000001 Rmu_sc0002513.1_g000014 Rmu_sc0002662.1_g000017 Rmu_sc0003936.1_g000040 Rmu_sc0004084.1_g000047 Rmu_sc0005529.1_g000005 Rmu_sc0005529.1_g000006 Rmu_sc0005728.1_g000010 Rmu_sc0005747.1_g000017 Rmu_sc0005747.1_g000018 Rmu_sc0006385.1_g000001 Rmu_sc0006550.1_g000019 Rmu_sc0006803.1_g000033 Rmu_sc0007102.1_g000011 Rmu_sc0011018.1_g000001 Rmu_sc0011452.1_g000014 Rmu_sc0011805.1_g000001 Rmu_sc0011805.1_g000002 Rmu_sc0012566.1_g000001 Rmu_sc0013807.1_g000007 Rmu_sc0015817.1_g000001 Rmu_sc0015930.1_g000011 Rmu_sc0018873.1_g000003 Rmu_sc0020929.1_g000001
rosa_roxburghii Rroxscaffold_2G00081310 Rroxscaffold_2G00111790 Rroxscaffold_5G00349530 Rroxscaffold_5G00356270 Rroxscaffold_5G00356280 Rroxscaffold_5G00356290
rosa_rugosa Rorug01G0056400 Rorug01G0056500 Rorug02G0247000 Rorug03G0271700 Rorug04G0157900 Rorug05G0221700 Rorug05G0251400 Rorug05G0251400 Rorug06G0087300 Rorug07G0221900 Rorug07G0221900
rosa_samantha Rh1AG073200 Rh1AG073300 Rh1AG124600 Rh1AG124700 Rh1BG091900 Rh1CG031600 Rh1CG072100 Rh1CG072200 Rh1CG118800 Rh1CG276600 Rh1CG276700 Rh1DG077300 Rh2BG192000 Rh2BG330900 Rh2BG331000 Rh2BG517700 Rh2BG517800 Rh2CG188300 Rh2DG120800 Rh2DG323900 Rh2DG420700 Rh2DG433000 Rh2DG529400 Rh2DG529500 Rh3DG358100 Rh3DG358200 Rh4BG129700 Rh4BG129800 Rh4BG129900 Rh4BG166400 Rh4CG032000 Rh4DG024800 Rh4DG039500 Rh5AG223400 Rh5BG244500 Rh5BG244600 Rh5BG244700 Rh5CG363000 Rh5CG366900 Rh6AG117500 Rh6AG188600 Rh6AG188700 Rh6AG188800 Rh6BG111400 Rh6BG140800 Rh6BG178800 Rh6DG124100 Rh6DG210000 Rh7AG441200 Rh7BG296800 Rh7BG413900 Rh7BG414000 Rh7BG452400 Rh7DG234000 Rh7DG234100
rosa_wichuraiana Rw2G019410 Rw5G042140 Rw7G019590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1171
Acc36I ACCTGC 3 cut(s) 469, 753, 1171
AccB7I CCANNNNNTGG 1 cut(s) 1790
AccI GTMKAC 2 cut(s) 316, 1732
AccII CGCG 1 cut(s) 465
AciI CCGC 3 cut(s) 1590, 2061, 2208
AclWI GGATC 2 cut(s) 1087, 2018
AcoI YGGCCR 2 cut(s) 321, 751
AcsI RAATTY 4 cut(s) 204, 386, 726, 1303
AcyI GRCGYC 1 cut(s) 1764
AfaI GTAC 7 cut(s) 580, 594, 705, 1166, 1176, 1202, 2323
AfiI CCNNNNNNNGG 4 cut(s) 186, 233, 1212, 1790
AflIII ACRYGT 1 cut(s) 1274
AjnI CCWGG 4 cut(s) 226, 632, 753, 1630
AjuI GAANNNNNNNTTGG 2 cut(s) 1339, 1371
Alw21I GWGCWC 1 cut(s) 268
Alw26I GTCTC 4 cut(s) 513, 1357, 1479, 2002
AlwI GGATC 2 cut(s) 1087, 2018
AlwNI CAGNNNCTG 3 cut(s) 36, 1637, 2276
AoxI GGCC 6 cut(s) 99, 321, 513, 532, 751, 2171
ApeKI GCWGC 4 cut(s) 453, 1061, 2069, 2196
ApoI RAATTY 4 cut(s) 204, 386, 726, 1303
Asp700I GAANNNNTTC 2 cut(s) 208, 691
AspA2I CCTAGG 1 cut(s) 731
AspLEI GCGC 2 cut(s) 294, 1255
AspS9I GGNCC 5 cut(s) 99, 630, 814, 911, 1928
AsuHPI GGTGA 6 cut(s) 111, 242, 387, 618, 1533, 1633
AvaII GGWCC 4 cut(s) 630, 814, 911, 1928
AvrII CCTAGG 1 cut(s) 731
BaeGI GKGCMC 2 cut(s) 1094, 1453
BalI TGGCCA 2 cut(s) 323, 753
BanII GRGCYC 3 cut(s) 268, 976, 1427
BauI CACGAG 1 cut(s) 1390
BbsI GAAGAC 4 cut(s) 452, 1501, 2128, 2194
Bbv12I GWGCWC 1 cut(s) 268
BbvCI CCTCAGC 1 cut(s) 1086
BbvI GCAGC 4 cut(s) 440, 1073, 2081, 2183
BccI CCATC 5 cut(s) 123, 536, 605, 1389, 1611
BceAI ACGGC 1 cut(s) 1679
BcgI CGANNNNNNTGC 2 cut(s) 1891, 1925
BciT130I CCWGG 4 cut(s) 228, 634, 755, 1632
BciVI GTATCC 1 cut(s) 751
BclI TGATCA 1 cut(s) 1013
BcoDI GTCTC 4 cut(s) 513, 1357, 1479, 2002
BfaI CTAG 2 cut(s) 732, 1369
BfmI CTRYAG 4 cut(s) 253, 931, 1178, 2130
BfoI RGCGCY 1 cut(s) 1256
BfuAI ACCTGC 3 cut(s) 469, 753, 1171
BfuI GTATCC 1 cut(s) 751
BisI GCNGC 4 cut(s) 454, 1062, 2070, 2197
BlnI CCTAGG 1 cut(s) 731
BlpI GCTNAGC 1 cut(s) 474
BlsI GCNGC 4 cut(s) 455, 1063, 2071, 2198
BmcAI AGTACT 1 cut(s) 580
Bme1390I CCNGG 4 cut(s) 228, 634, 755, 1632
Bme18I GGWCC 4 cut(s) 630, 814, 911, 1928
BmgT120I GGNCC 5 cut(s) 99, 630, 814, 911, 1928
BmiI GGNNCC 3 cut(s) 100, 368, 397
BmrFI CCNGG 4 cut(s) 228, 634, 755, 1632
BmrI ACTGGG 2 cut(s) 591, 1494
BmsI GCATC 4 cut(s) 151, 562, 796, 842
BmuI ACTGGG 2 cut(s) 591, 1494
BpiI GAAGAC 4 cut(s) 452, 1501, 2128, 2194
BplI GAGNNNNNCTC 2 cut(s) 2099, 2131
BpmI CTGGAG 1 cut(s) 1677
Bpu10I CCTNAGC 2 cut(s) 1086, 1723
Bpu1102I GCTNAGC 1 cut(s) 474
BpuEI CTTGAG 5 cut(s) 290, 990, 1316, 1953, 1983
BsaAI YACGTR 1 cut(s) 1168
BsaHI GRCGYC 1 cut(s) 1764
BsaJI CCNNGG 7 cut(s) 324, 596, 731, 1924, 1948, 1981, 2041
BsaWI WCCGGW 1 cut(s) 1571
Bsc4I CCNNNNNNNGG 4 cut(s) 186, 233, 1212, 1790
Bse118I RCCGGY 1 cut(s) 179
Bse1I ACTGG 6 cut(s) 324, 454, 586, 1316, 1500, 1907
Bse3DI GCAATG 2 cut(s) 1071, 1717
BseBI CCWGG 4 cut(s) 228, 634, 755, 1632
BseDI CCNNGG 7 cut(s) 324, 596, 731, 1924, 1948, 1981, 2041
BseGI GGATG 3 cut(s) 1541, 1958, 2069
BseLI CCNNNNNNNGG 4 cut(s) 186, 233, 1212, 1790
BseMI GCAATG 2 cut(s) 1071, 1717
BseMII CTCAG 7 cut(s) 508, 1077, 1351, 1737, 2013, 2212, 2332
BseNI ACTGG 6 cut(s) 324, 454, 586, 1316, 1500, 1907
BseRI GAGGAG 1 cut(s) 1980
BseSI GKGCMC 2 cut(s) 1094, 1453
BseXI GCAGC 4 cut(s) 440, 1073, 2081, 2183
BsgI GTGCAG 2 cut(s) 49, 1308
Bsh1236I CGCG 1 cut(s) 465
BshFI GGCC 6 cut(s) 101, 323, 515, 534, 753, 2173
BsiHKAI GWGCWC 1 cut(s) 268
BsiSI CCGG 2 cut(s) 180, 1572
BslFI GGGAC 3 cut(s) 1122, 1228, 1414
BslI CCNNNNNNNGG 4 cut(s) 186, 233, 1212, 1790
BsmAI GTCTC 4 cut(s) 513, 1357, 1479, 2002
BsmFI GGGAC 3 cut(s) 1122, 1228, 1414
BsmI GAATGC 1 cut(s) 456
BsnI GGCC 6 cut(s) 101, 323, 515, 534, 753, 2173
Bsp1286I GDGCHC 5 cut(s) 268, 976, 1094, 1427, 1453
Bsp143I GATC 5 cut(s) 1013, 1079, 1800, 2010, 2088
Bsp1720I GCTNAGC 1 cut(s) 474
Bsp19I CCATGG 3 cut(s) 324, 596, 1948
BspACI CCGC 3 cut(s) 1590, 2061, 2208
BspANI GGCC 6 cut(s) 101, 323, 515, 534, 753, 2173
BspCNI CTCAG 7 cut(s) 509, 1078, 1350, 1736, 2012, 2213, 2331
BspFNI CGCG 1 cut(s) 465
BspHI TCATGA 1 cut(s) 1237
BspLI GGNNCC 3 cut(s) 100, 368, 397
BspMAI CTGCAG 3 cut(s) 935, 1182, 2134
BspMI ACCTGC 3 cut(s) 469, 753, 1171
BspPI GGATC 2 cut(s) 1087, 2018
BspQI GCTCTTC 1 cut(s) 644
BsrDI GCAATG 2 cut(s) 1071, 1717
BsrFI RCCGGY 1 cut(s) 179
BsrI ACTGG 6 cut(s) 324, 454, 586, 1316, 1500, 1907
BssAI RCCGGY 1 cut(s) 179
BssECI CCNNGG 7 cut(s) 324, 596, 731, 1924, 1948, 1981, 2041
BssMI GATC 5 cut(s) 1013, 1079, 1800, 2010, 2088
BssNI GRCGYC 1 cut(s) 1764
BssSI CACGAG 1 cut(s) 1390
BssT1I CCWWGG 5 cut(s) 324, 596, 731, 1948, 1981
Bst2BI CACGAG 1 cut(s) 1390
Bst2UI CCWGG 4 cut(s) 228, 634, 755, 1632
Bst4CI ACNGT 6 cut(s) 257, 501, 578, 867, 1162, 1490
Bst6I CTCTTC 3 cut(s) 644, 1477, 2076
BstACI GRCGYC 1 cut(s) 1764
BstBAI YACGTR 1 cut(s) 1168
BstC8I GCNNGC 2 cut(s) 678, 2134
BstDSI CCRYGG 4 cut(s) 324, 596, 1948, 2041
BstENI CCTNNNNNAGG 1 cut(s) 231
BstF5I GGATG 3 cut(s) 1541, 1958, 2069
BstFNI CGCG 1 cut(s) 465
BstH2I RGCGCY 1 cut(s) 1256
BstHHI GCGC 2 cut(s) 294, 1255
BstKTI GATC 5 cut(s) 1016, 1082, 1803, 2013, 2091
BstMAI GTCTC 4 cut(s) 513, 1357, 1479, 2002
BstMBI GATC 5 cut(s) 1013, 1079, 1800, 2010, 2088
BstMWI GCNNNNNNNGC 6 cut(s) 98, 462, 759, 944, 2037, 2205
BstNI CCWGG 4 cut(s) 228, 634, 755, 1632
BstNSI RCATGY 2 cut(s) 1278, 1817
BstSCI CCNGG 4 cut(s) 226, 632, 753, 1630
BstSFI CTRYAG 4 cut(s) 253, 931, 1178, 2130
BstSLI GKGCMC 2 cut(s) 1094, 1453
BstUI CGCG 1 cut(s) 465
BstV1I GCAGC 4 cut(s) 440, 1073, 2081, 2183
BstV2I GAAGAC 4 cut(s) 452, 1501, 2128, 2194
BstX2I RGATCY 2 cut(s) 1079, 2010
BstXI CCANNNNNNTGG 4 cut(s) 129, 581, 603, 627
BstYI RGATCY 2 cut(s) 1079, 2010
BsuI GTATCC 1 cut(s) 751
BsuRI GGCC 6 cut(s) 101, 323, 515, 534, 753, 2173
BtgI CCRYGG 4 cut(s) 324, 596, 1948, 2041
BtgZI GCGATG 1 cut(s) 819
BtsCI GGATG 3 cut(s) 1541, 1958, 2069
BtsI GCAGTG 1 cut(s) 940
BtsIMutI CAGTG 3 cut(s) 940, 1167, 1507
BveI ACCTGC 3 cut(s) 469, 753, 1171
Cac8I GCNNGC 2 cut(s) 678, 2134
CaiI CAGNNNCTG 3 cut(s) 36, 1637, 2276
CciI TCATGA 1 cut(s) 1237
CfoI GCGC 2 cut(s) 294, 1255
Cfr10I RCCGGY 1 cut(s) 179
Cfr13I GGNCC 5 cut(s) 99, 630, 814, 911, 1928
CseI GACGC 1 cut(s) 1772
CsiI ACCWGGT 1 cut(s) 226
Csp6I GTAC 7 cut(s) 579, 593, 704, 1165, 1175, 1201, 2322
CviQI GTAC 7 cut(s) 579, 593, 704, 1165, 1175, 1201, 2322
DpnI GATC 5 cut(s) 1015, 1081, 1802, 2012, 2090
DpnII GATC 5 cut(s) 1013, 1079, 1800, 2010, 2088
EaeI YGGCCR 2 cut(s) 321, 751
Eam1104I CTCTTC 3 cut(s) 644, 1477, 2076
EarI CTCTTC 3 cut(s) 644, 1477, 2076
EciI GGCGGA 1 cut(s) 2223
Ecl136II GAGCTC 1 cut(s) 266
Eco130I CCWWGG 5 cut(s) 324, 596, 731, 1948, 1981
Eco147I AGGCCT 1 cut(s) 515
Eco24I GRGCYC 3 cut(s) 268, 976, 1427
Eco32I GATATC 2 cut(s) 1978, 2054
Eco47I GGWCC 4 cut(s) 630, 814, 911, 1928
Eco53kI GAGCTC 1 cut(s) 266
EcoICRI GAGCTC 1 cut(s) 266
EcoNI CCTNNNNNAGG 1 cut(s) 231
EcoO109I RGGNCCY 3 cut(s) 99, 911, 1928
EcoRI GAATTC 3 cut(s) 204, 386, 726
EcoRII CCWGG 4 cut(s) 226, 632, 753, 1630
EcoRV GATATC 2 cut(s) 1978, 2054
EcoT14I CCWWGG 5 cut(s) 324, 596, 731, 1948, 1981
EcoT38I GRGCYC 3 cut(s) 268, 976, 1427
ErhI CCWWGG 5 cut(s) 324, 596, 731, 1948, 1981
FalI AAGNNNNNCTT 2 cut(s) 2133, 2165
FaqI GGGAC 3 cut(s) 1122, 1228, 1414
FbaI TGATCA 1 cut(s) 1013
FblI GTMKAC 2 cut(s) 316, 1732
Fnu4HI GCNGC 4 cut(s) 454, 1062, 2070, 2197
FokI GGATG 3 cut(s) 1548, 1965, 2076
FriOI GRGCYC 3 cut(s) 268, 976, 1427
Fsp4HI GCNGC 4 cut(s) 454, 1062, 2070, 2197
FspBI CTAG 2 cut(s) 732, 1369
GlaI GCGC 2 cut(s) 293, 1254
GluI GCNGC 4 cut(s) 454, 1062, 2070, 2197
GsuI CTGGAG 1 cut(s) 1677
HaeII RGCGCY 1 cut(s) 1256
HaeIII GGCC 6 cut(s) 101, 323, 515, 534, 753, 2173
HapII CCGG 2 cut(s) 180, 1572
HgaI GACGC 1 cut(s) 1772
HhaI GCGC 2 cut(s) 294, 1255
Hin1I GRCGYC 1 cut(s) 1764
Hin6I GCGC 2 cut(s) 292, 1253
HinP1I GCGC 2 cut(s) 292, 1253
HindIII AAGCTT 2 cut(s) 1618, 2178
HinfI GANTC 5 cut(s) 779, 1995, 2046, 2145, 2283
HpaII CCGG 2 cut(s) 180, 1572
HphI GGTGA 6 cut(s) 111, 242, 387, 618, 1533, 1633
Hpy166II GTNNAC 4 cut(s) 317, 593, 1165, 1733
Hpy8I GTNNAC 4 cut(s) 317, 593, 1165, 1733
Hpy99I CGWCG 2 cut(s) 1287, 1766
HpyAV CCTTC 6 cut(s) 227, 502, 1244, 1709, 2135, 2225
HpyCH4III ACNGT 6 cut(s) 257, 501, 578, 867, 1162, 1490
HpyCH4IV ACGT 3 cut(s) 667, 1142, 1167
HpyF10VI GCNNNNNNNGC 6 cut(s) 98, 462, 759, 944, 2037, 2205
HpySE526I ACGT 3 cut(s) 667, 1142, 1167
Hsp92I GRCGYC 1 cut(s) 1764
HspAI GCGC 2 cut(s) 292, 1253
Ksp22I TGATCA 1 cut(s) 1013
Kzo9I GATC 5 cut(s) 1013, 1079, 1800, 2010, 2088
LguI GCTCTTC 1 cut(s) 644
LmnI GCTCC 2 cut(s) 366, 1398
Lsp1109I GCAGC 4 cut(s) 440, 1073, 2081, 2183
LweI GCATC 4 cut(s) 151, 562, 796, 842
MabI ACCWGGT 1 cut(s) 226
MaeI CTAG 2 cut(s) 732, 1369
MaeII ACGT 3 cut(s) 667, 1142, 1167
MaeIII GTNAC 2 cut(s) 1639, 1871
MalI GATC 5 cut(s) 1015, 1081, 1802, 2012, 2090
MboI GATC 5 cut(s) 1013, 1079, 1800, 2010, 2088
MflI RGATCY 2 cut(s) 1079, 2010
MhlI GDGCHC 5 cut(s) 268, 976, 1094, 1427, 1453
MlsI TGGCCA 2 cut(s) 323, 753
MluNI TGGCCA 2 cut(s) 323, 753
MlyI GAGTC 2 cut(s) 788, 2004
MmeI TCCRAC 4 cut(s) 520, 667, 1513, 2233
Mox20I TGGCCA 2 cut(s) 323, 753
MroXI GAANNNNTTC 2 cut(s) 208, 691
MscI TGGCCA 2 cut(s) 323, 753
MseI TTAA 4 cut(s) 105, 1330, 1831, 1914
MslI CAYNNNNRTG 2 cut(s) 127, 921
Msp20I TGGCCA 2 cut(s) 323, 753
MspI CCGG 2 cut(s) 180, 1572
MspR9I CCNGG 4 cut(s) 228, 634, 755, 1632
Mva1269I GAATGC 1 cut(s) 456
MvaI CCWGG 4 cut(s) 228, 634, 755, 1632
MvnI CGCG 1 cut(s) 465
MwoI GCNNNNNNNGC 6 cut(s) 98, 462, 759, 944, 2037, 2205
NcoI CCATGG 3 cut(s) 324, 596, 1948
NdeII GATC 5 cut(s) 1013, 1079, 1800, 2010, 2088
NlaIV GGNNCC 3 cut(s) 100, 368, 397
NmuCI GTSAC 1 cut(s) 1639
NspI RCATGY 2 cut(s) 1278, 1817
PagI TCATGA 1 cut(s) 1237
PaqCI CACCTGC 1 cut(s) 1171
PceI AGGCCT 1 cut(s) 515
PciI ACATGT 1 cut(s) 1274
PciSI GCTCTTC 1 cut(s) 644
PcsI WCGNNNNNNNCGW 3 cut(s) 1148, 1388, 1867
PctI GAATGC 1 cut(s) 456
PdmI GAANNNNTTC 2 cut(s) 208, 691
PfeI GAWTC 3 cut(s) 2046, 2145, 2283
PflMI CCANNNNNTGG 1 cut(s) 1790
PkrI GCNGC 4 cut(s) 455, 1063, 2071, 2198
PleI GAGTC 2 cut(s) 787, 2003
PpsI GAGTC 2 cut(s) 787, 2003
Ppu21I YACGTR 1 cut(s) 1168
PpuMI RGGWCCY 2 cut(s) 911, 1928
PscI ACATGT 1 cut(s) 1274
Psp124BI GAGCTC 1 cut(s) 268
Psp5II RGGWCCY 2 cut(s) 911, 1928
Psp6I CCWGG 4 cut(s) 226, 632, 753, 1630
PspGI CCWGG 4 cut(s) 226, 632, 753, 1630
PspN4I GGNNCC 3 cut(s) 100, 368, 397
PspPI GGNCC 5 cut(s) 99, 630, 814, 911, 1928
PspPPI RGGWCCY 2 cut(s) 911, 1928
PstI CTGCAG 3 cut(s) 935, 1182, 2134
PstNI CAGNNNCTG 3 cut(s) 36, 1637, 2276
PsuI RGATCY 2 cut(s) 1079, 2010
RsaI GTAC 7 cut(s) 580, 594, 705, 1166, 1176, 1202, 2323
RsaNI GTAC 7 cut(s) 579, 593, 704, 1165, 1175, 1201, 2322
RseI CAYNNNNRTG 2 cut(s) 127, 921
SacI GAGCTC 1 cut(s) 268
SapI GCTCTTC 1 cut(s) 644
SaqAI TTAA 4 cut(s) 105, 1330, 1831, 1914
SatI GCNGC 4 cut(s) 454, 1062, 2070, 2197
Sau3AI GATC 5 cut(s) 1013, 1079, 1800, 2010, 2088
Sau96I GGNCC 5 cut(s) 99, 630, 814, 911, 1928
ScaI AGTACT 1 cut(s) 580
SchI GAGTC 2 cut(s) 788, 2004
ScrFI CCNGG 4 cut(s) 228, 634, 755, 1632
SduI GDGCHC 5 cut(s) 268, 976, 1094, 1427, 1453
SexAI ACCWGGT 1 cut(s) 226
SfaNI GCATC 4 cut(s) 151, 562, 796, 842
SfcI CTRYAG 4 cut(s) 253, 931, 1178, 2130
SinI GGWCC 4 cut(s) 630, 814, 911, 1928
SmiMI CAYNNNNRTG 2 cut(s) 127, 921
SmlI CTYRAG 5 cut(s) 269, 969, 1295, 1932, 1962
SmoI CTYRAG 5 cut(s) 269, 969, 1295, 1932, 1962
SseBI AGGCCT 1 cut(s) 515
SsiI CCGC 3 cut(s) 1590, 2061, 2208
SspI AATATT 1 cut(s) 690
SspMI CTAG 2 cut(s) 732, 1369
SstI GAGCTC 1 cut(s) 268
StuI AGGCCT 1 cut(s) 515
StyD4I CCNGG 4 cut(s) 226, 632, 753, 1630
StyI CCWWGG 5 cut(s) 324, 596, 731, 1948, 1981
TaaI ACNGT 6 cut(s) 257, 501, 578, 867, 1162, 1490
TaiI ACGT 3 cut(s) 670, 1145, 1170
TaqI TCGA 3 cut(s) 1382, 1761, 1861
TatI WGTACW 4 cut(s) 578, 703, 1200, 2321
TfiI GAWTC 3 cut(s) 2046, 2145, 2283
Tru1I TTAA 4 cut(s) 105, 1330, 1831, 1914
Tru9I TTAA 4 cut(s) 105, 1330, 1831, 1914
TscAI CASTG 3 cut(s) 940, 1167, 1507
TseFI GTSAC 1 cut(s) 1639
TseI GCWGC 4 cut(s) 453, 1061, 2069, 2196
Tsp45I GTSAC 1 cut(s) 1639
TspDTI ATGAA 7 cut(s) 197, 1226, 1453, 1530, 1600, 1744, 2179
TspGWI ACGGA 4 cut(s) 40, 379, 836, 2058
TspRI CASTG 3 cut(s) 940, 1167, 1507
Van91I CCANNNNNTGG 1 cut(s) 1790
VpaK11BI GGWCC 4 cut(s) 630, 814, 911, 1928
XagI CCTNNNNNAGG 1 cut(s) 231
XapI RAATTY 4 cut(s) 204, 386, 726, 1303
XbaI TCTAGA 1 cut(s) 1368
XceI RCATGY 2 cut(s) 1278, 1817
XcmI CCANNNNNNNNNTGG 1 cut(s) 669
XmaJI CCTAGG 1 cut(s) 731
XmiI GTMKAC 2 cut(s) 316, 1732
XmnI GAANNNNTTC 2 cut(s) 208, 691
XspI CTAG 2 cut(s) 732, 1369
ZrmI AGTACT 1 cut(s) 580
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.