Rmu_sc0002513.1_g000014

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002513.1
OG0000253
Physical Location & Seq
Forward (+)
68910 .. 71426
2517 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002513.1_g000014.1.cds

Sequence Viewer

Length: 2424 bp
atgaaggcaaacaacgaagaggacggtgacaacaagttcccagttggcgaagatttttacccagcccttcatagaatgctgaagtgtaagaaagactggggtgaagacttctgttttcgtggtcgggccgtatttgagcatggcattctagaatggacggaaaccaccctaactgaatttgaagagacattagacaaagctggtattttcggtgcagttgctgtttcccgttatccgtttgagtattgcagtaatgtgtggagggcattctgtgagctgtgggggcctttaacaaacacttttcaccatgcagatggggaaatgagcatctctttgcatgatttgaatgttattggaggattgccggtttcaggagaaccatacgaagaattcattcctccaaataaagatctggtagagattgaattatatcattcttcggttgcagagctcttaaggatttatacctatctgtgtgcagcttataagagcagatatgtctactggccatggtggatcgaacatttttatcgtggggagataatttacggagcctatggtgaatgtaagaattctggagttccgaaactgagagaaccaaagcttcagttgaagatttcaaagcaaggaagactggctgcattcctcgcgttctggcttagcaggttcgttctcccttccaacagtaagaagataaggcctgggactttctatatggcctctttgatggcacagggcatcagggtatctcttgcgcccacagtactgggttatgtgtaccatggtcttggtgagatggctactcactctgctggtcctggctcttccaactcttgtctgcctatccactacgtcattggctggcttggagaatattttccttatctgtattcatcacgctctgataaagaattccccgtagggtatccccgtttggccaggtatgcaggtgttcaaggaaggaatctaagcattacagaggctcgtatggttttcaggaccaataaatctgtagtgcatcgccctatctctgtagcctgtgaaaaagaccgttttttgcttgatgacgacaaattgcctgatgtgttatttgaggtcctcatctgtatgcgttctgcagtgcttcctgtgcgagttggcgagagtcttttccttgagccctattatccaaacaggtttgctcgtcaatttggtcttgatcagagtgttccctctaacaaactatcctttagtgtgtctaaaaggcagcaatgtggtgtcgaggatctgctgagggcacagactatcctgtataggaagaacactacctctcgtttctttatccgacgctcttctcgttctggacagtgtacatggtggtactgtaggtggtggtcaagagcttgtactccttacttggggctatcggtgtccaaaaccttcatgactttgaataagcgccctcttgaaaagccacaacgtgttttcgtcgtgcagaacttgagagaaatttctactggtttgaaacaagaggttaaaatctcagaggtggaaaagtctcttgggaaatcttctagaaaggcacctcgaaaatctcgtgatggagcttcttgttctaaggccagcagggctcatcctacaggtgaatgtggtgggcacaaaagagttaggcttgaaaaggtagttgaagagactgtcgttatcccagtgaagtcttcttcaaatggtgagcgtgagttggatgttcacagccccttgagagtggaagctttaaatcttgtcattgagaatgaagcggttatgccaaccatctatttgagtgaagcttcttcaaaccaggctctatcaccattgtcaaatttggagaactccatatctaatttgcttggttcagaactgccgtccttcaagaagaattacctcattgctcaggttgtagacatttacgctaaagtttcttcatcttcgatgccaaaggagctgttagtccatgttttggacattagatcaagtcttgacatgcttcgccctgcaattaagcctctgaaagctggaaagtcgcaacttgaagcgttcgtaactgctattgagaaaatgctggaggtggcggaccagtcgttagctactactgaggtccttgagcagaaaactaccatggatgttgaacttgagaagtatgagcagcgtgttcagaagaggcgatcagaatataatgctaagagacaatctcttgaagacactctgcaggaactgaaggattccttgaaagagcatgatgaaagaggccagaagcttcaagaagatagagctgcttatatggaggagaaactccctgagattgagcaggcttcggcttcgtataagttggaaacagaggcgtatcagagcctattcgattctttgttcccgttattccatgtgtgcaccaccccagtacagacttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

807

Amino Acids

91.94

Weight (kDa)

8.38

Isoelectric Point (pI)

54.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000253)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28912 FvH4_3g31370 FvH4_3g31371 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_6g28991 FvH4_7g16740 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610
malus_domestica MD10G1126100.v1.1 MD10G1312700.v1.1
rosa_chinensis RchiOBHm_Chr6g0276621
rosa_laevigata RLG00000023327 RLG00000023328
rosa_multiflora Rmu_co8195922.1_g000001 Rmu_co8303105.1_g000001 Rmu_co8385689.1_g000001 Rmu_sc0000385.1_g000010 Rmu_sc0000594.1_g000002 Rmu_sc0000857.1_g000010 Rmu_sc0001016.1_g000053 Rmu_sc0001468.1_g000028 Rmu_sc0001548.1_g000047 Rmu_sc0001548.1_g000048 Rmu_sc0002281.1_g000026 Rmu_sc0002281.1_g000027 Rmu_sc0002281.1_g000028 Rmu_sc0002478.1_g000001 Rmu_sc0002513.1_g000014 Rmu_sc0002662.1_g000017 Rmu_sc0003936.1_g000040 Rmu_sc0004084.1_g000047 Rmu_sc0005529.1_g000005 Rmu_sc0005529.1_g000006 Rmu_sc0005728.1_g000010 Rmu_sc0005747.1_g000017 Rmu_sc0005747.1_g000018 Rmu_sc0006385.1_g000001 Rmu_sc0006550.1_g000019 Rmu_sc0006803.1_g000033 Rmu_sc0007102.1_g000011 Rmu_sc0011018.1_g000001 Rmu_sc0011452.1_g000014 Rmu_sc0011805.1_g000001 Rmu_sc0011805.1_g000002 Rmu_sc0012566.1_g000001 Rmu_sc0013807.1_g000007 Rmu_sc0015817.1_g000001 Rmu_sc0015930.1_g000011 Rmu_sc0018873.1_g000003 Rmu_sc0020929.1_g000001
rosa_roxburghii Rroxscaffold_2G00081310 Rroxscaffold_2G00111790 Rroxscaffold_5G00349530 Rroxscaffold_5G00356270 Rroxscaffold_5G00356280 Rroxscaffold_5G00356290
rosa_rugosa Rorug01G0056400 Rorug01G0056500 Rorug02G0247000 Rorug03G0271700 Rorug04G0157900 Rorug05G0221700 Rorug05G0251400 Rorug05G0251400 Rorug06G0087300 Rorug07G0221900 Rorug07G0221900
rosa_samantha Rh1AG073200 Rh1AG073300 Rh1AG124600 Rh1AG124700 Rh1BG091900 Rh1CG031600 Rh1CG072100 Rh1CG072200 Rh1CG118800 Rh1CG276600 Rh1CG276700 Rh1DG077300 Rh2BG192000 Rh2BG330900 Rh2BG331000 Rh2BG517700 Rh2BG517800 Rh2CG188300 Rh2DG120800 Rh2DG323900 Rh2DG420700 Rh2DG433000 Rh2DG529400 Rh2DG529500 Rh3DG358100 Rh3DG358200 Rh4BG129700 Rh4BG129800 Rh4BG129900 Rh4BG166400 Rh4CG032000 Rh4DG024800 Rh4DG039500 Rh5AG223400 Rh5BG244500 Rh5BG244600 Rh5BG244700 Rh5CG363000 Rh5CG366900 Rh6AG117500 Rh6AG188600 Rh6AG188700 Rh6AG188800 Rh6BG111400 Rh6BG140800 Rh6BG178800 Rh6DG124100 Rh6DG210000 Rh7AG441200 Rh7BG296800 Rh7BG413900 Rh7BG414000 Rh7BG452400 Rh7DG234000 Rh7DG234100
rosa_wichuraiana Rw2G019410 Rw5G042140 Rw7G019590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 486
AarI CACCTGC 1 cut(s) 938
Acc36I ACCTGC 2 cut(s) 654, 938
AccB1I GGYRCC 1 cut(s) 1561
AccB7I CCANNNNNTGG 1 cut(s) 1975
AccI GTMKAC 2 cut(s) 501, 1917
AccII CGCG 1 cut(s) 650
AciI CCGC 2 cut(s) 1775, 2087
AclWI GGATC 2 cut(s) 524, 1272
AcoI YGGCCR 2 cut(s) 506, 936
AcsI RAATTY 6 cut(s) 176, 389, 571, 911, 1488, 1837
AcuI CTGAAG 3 cut(s) 101, 590, 2252
AdeI CACNNNGTG 1 cut(s) 1460
AfaI GTAC 6 cut(s) 765, 779, 1351, 1361, 1387, 2415
AfiI CCNNNNNNNGG 3 cut(s) 371, 1397, 1975
AflII CTTAAG 1 cut(s) 454
AflIII ACRYGT 1 cut(s) 1459
AjnI CCWGG 4 cut(s) 700, 817, 938, 1815
AjuI GAANNNNNNNTTGG 2 cut(s) 1524, 1556
Alw21I GWGCWC 2 cut(s) 453, 2405
Alw26I GTCTC 4 cut(s) 179, 1542, 1664, 2194
Alw44I GTGCAC 1 cut(s) 2401
AlwI GGATC 2 cut(s) 524, 1272
AlwNI CAGNNNCTG 2 cut(s) 221, 2230
AoxI GGCC 8 cut(s) 126, 284, 506, 698, 717, 936, 1599, 2263
ApaLI GTGCAC 1 cut(s) 2401
ApeKI GCWGC 5 cut(s) 479, 638, 1246, 2161, 2288
ApoI RAATTY 6 cut(s) 176, 389, 571, 911, 1488, 1837
Asp700I GAANNNNTTC 2 cut(s) 393, 876
AspLEI GCGC 2 cut(s) 757, 1440
AspS9I GGNCC 7 cut(s) 126, 284, 815, 999, 1096, 2089, 2113
AsuHPI GGTGA 8 cut(s) 38, 113, 296, 572, 803, 1634, 1718, 1818
AvaII GGWCC 5 cut(s) 815, 999, 1096, 2089, 2113
BaeGI GKGCMC 3 cut(s) 1279, 1638, 2405
BalI TGGCCA 2 cut(s) 508, 938
BanI GGYRCC 1 cut(s) 1561
BanII GRGCYC 3 cut(s) 453, 1161, 1612
BauI CACGAG 1 cut(s) 1575
BbsI GAAGAC 4 cut(s) 111, 637, 1686, 2220
Bbv12I GWGCWC 2 cut(s) 453, 2405
BbvCI CCTCAGC 1 cut(s) 1271
BbvI GCAGC 5 cut(s) 491, 625, 1258, 2173, 2275
BccI CCATC 5 cut(s) 308, 721, 790, 1574, 1796
BceAI ACGGC 2 cut(s) 113, 1864
BciT130I CCWGG 4 cut(s) 702, 819, 940, 1817
BciVI GTATCC 1 cut(s) 936
BclI TGATCA 1 cut(s) 1198
BcoDI GTCTC 4 cut(s) 179, 1542, 1664, 2194
BfaI CTAG 2 cut(s) 149, 1554
BfmI CTRYAG 6 cut(s) 1011, 1032, 1116, 1363, 1617, 2222
BfoI RGCGCY 1 cut(s) 1441
BfrI CTTAAG 1 cut(s) 454
BfuAI ACCTGC 2 cut(s) 654, 938
BfuI GTATCC 1 cut(s) 936
BglI GCCNNNNNGGC 1 cut(s) 1607
BglII AGATCT 1 cut(s) 409
BisI GCNGC 5 cut(s) 480, 639, 1247, 2162, 2289
BlpI GCTNAGC 1 cut(s) 659
BlsI GCNGC 5 cut(s) 481, 640, 1248, 2163, 2290
BmcAI AGTACT 1 cut(s) 765
Bme1390I CCNGG 4 cut(s) 702, 819, 940, 1817
Bme18I GGWCC 5 cut(s) 815, 999, 1096, 2089, 2113
BmgT120I GGNCC 7 cut(s) 126, 284, 815, 999, 1096, 2089, 2113
BmiI GGNNCC 3 cut(s) 285, 553, 1563
BmrFI CCNGG 4 cut(s) 702, 819, 940, 1817
BmrI ACTGGG 5 cut(s) 35, 106, 776, 1679, 2405
BmsI GCATC 4 cut(s) 336, 747, 1027, 1938
BmuI ACTGGG 5 cut(s) 35, 106, 776, 1679, 2405
BpiI GAAGAC 4 cut(s) 111, 637, 1686, 2220
BplI GAGNNNNNCTC 2 cut(s) 2191, 2223
BpmI CTGGAG 2 cut(s) 597, 2099
Bpu10I CCTNAGC 2 cut(s) 1271, 1908
Bpu1102I GCTNAGC 1 cut(s) 659
BpuEI CTTGAG 5 cut(s) 1175, 1501, 1756, 2138, 2168
BsaJI CCNNGG 4 cut(s) 509, 701, 781, 2133
Bsc4I CCNNNNNNNGG 3 cut(s) 371, 1397, 1975
Bse118I RCCGGY 1 cut(s) 364
Bse1I ACTGG 9 cut(s) 41, 101, 509, 639, 771, 1501, 1685, 2092, 2411
Bse3DI GCAATG 2 cut(s) 1256, 1902
BseBI CCWGG 4 cut(s) 702, 819, 940, 1817
BseDI CCNNGG 4 cut(s) 509, 701, 781, 2133
BseGI GGATG 3 cut(s) 1612, 1726, 2143
BseLI CCNNNNNNNGG 3 cut(s) 371, 1397, 1975
BseMI GCAATG 2 cut(s) 1256, 1902
BseMII CTCAG 6 cut(s) 581, 1262, 1536, 1922, 2100, 2304
BseNI ACTGG 9 cut(s) 41, 101, 509, 639, 771, 1501, 1685, 2092, 2411
BseRI GAGGAG 1 cut(s) 2315
BseSI GKGCMC 3 cut(s) 1279, 1638, 2405
BseXI GCAGC 5 cut(s) 491, 625, 1258, 2173, 2275
BseYI CCCAGC 1 cut(s) 61
BsgI GTGCAG 3 cut(s) 234, 498, 1493
Bsh1236I CGCG 1 cut(s) 650
BshFI GGCC 8 cut(s) 128, 286, 508, 700, 719, 938, 1601, 2265
BshNI GGYRCC 1 cut(s) 1561
BsiHKAI GWGCWC 2 cut(s) 453, 2405
BsiSI CCGG 1 cut(s) 365
BslFI GGGAC 1 cut(s) 718
BslI CCNNNNNNNGG 3 cut(s) 371, 1397, 1975
BsmAI GTCTC 4 cut(s) 179, 1542, 1664, 2194
BsmFI GGGAC 1 cut(s) 718
BsmI GAATGC 4 cut(s) 81, 144, 266, 641
BsnI GGCC 8 cut(s) 128, 286, 508, 700, 719, 938, 1601, 2265
Bsp1286I GDGCHC 6 cut(s) 453, 1161, 1279, 1612, 1638, 2405
Bsp1407I TGTACA 1 cut(s) 1349
Bsp143I GATC 6 cut(s) 409, 516, 1198, 1264, 1985, 2180
Bsp1720I GCTNAGC 1 cut(s) 659
Bsp19I CCATGG 3 cut(s) 509, 781, 2133
BspACI CCGC 2 cut(s) 1775, 2087
BspANI GGCC 8 cut(s) 128, 286, 508, 700, 719, 938, 1601, 2265
BspCNI CTCAG 6 cut(s) 582, 1263, 1535, 1921, 2101, 2305
BspFNI CGCG 1 cut(s) 650
BspHI TCATGA 1 cut(s) 1422
BspLI GGNNCC 3 cut(s) 285, 553, 1563
BspMAI CTGCAG 2 cut(s) 1120, 2226
BspMI ACCTGC 2 cut(s) 654, 938
BspPI GGATC 2 cut(s) 524, 1272
BspQI GCTCTTC 2 cut(s) 829, 1336
BspT107I GGYRCC 1 cut(s) 1561
BspTI CTTAAG 1 cut(s) 454
BsrDI GCAATG 2 cut(s) 1256, 1902
BsrFI RCCGGY 1 cut(s) 364
BsrGI TGTACA 1 cut(s) 1349
BsrI ACTGG 9 cut(s) 41, 101, 509, 639, 771, 1501, 1685, 2092, 2411
BssAI RCCGGY 1 cut(s) 364
BssECI CCNNGG 4 cut(s) 509, 701, 781, 2133
BssMI GATC 6 cut(s) 409, 516, 1198, 1264, 1985, 2180
BssSI CACGAG 1 cut(s) 1575
BssT1I CCWWGG 3 cut(s) 509, 781, 2133
Bst2BI CACGAG 1 cut(s) 1575
Bst2UI CCWGG 4 cut(s) 702, 819, 940, 1817
Bst4CI ACNGT 7 cut(s) 26, 686, 763, 1052, 1347, 1364, 1675
Bst6I CTCTTC 6 cut(s) 12, 177, 829, 1336, 1662, 2168
BstAFI CTTAAG 1 cut(s) 454
BstAUI TGTACA 1 cut(s) 1349
BstC8I GCNNGC 3 cut(s) 863, 1603, 2325
BstDSI CCRYGG 3 cut(s) 509, 781, 2133
BstF5I GGATG 3 cut(s) 1612, 1726, 2143
BstFNI CGCG 1 cut(s) 650
BstH2I RGCGCY 1 cut(s) 1441
BstHHI GCGC 2 cut(s) 757, 1440
BstKTI GATC 6 cut(s) 412, 519, 1201, 1267, 1988, 2183
BstMAI GTCTC 4 cut(s) 179, 1542, 1664, 2194
BstMBI GATC 6 cut(s) 409, 516, 1198, 1264, 1985, 2180
BstMWI GCNNNNNNNGC 6 cut(s) 283, 647, 944, 1129, 1607, 1957
BstNI CCWGG 4 cut(s) 702, 819, 940, 1817
BstNSI RCATGY 1 cut(s) 2002
BstSCI CCNGG 4 cut(s) 700, 817, 938, 1815
BstSFI CTRYAG 6 cut(s) 1011, 1032, 1116, 1363, 1617, 2222
BstSLI GKGCMC 3 cut(s) 1279, 1638, 2405
BstUI CGCG 1 cut(s) 650
BstV1I GCAGC 5 cut(s) 491, 625, 1258, 2173, 2275
BstV2I GAAGAC 4 cut(s) 111, 637, 1686, 2220
BstX2I RGATCY 2 cut(s) 409, 1264
BstXI CCANNNNNNTGG 3 cut(s) 314, 766, 788
BstYI RGATCY 2 cut(s) 409, 1264
BsuI GTATCC 1 cut(s) 936
BsuRI GGCC 8 cut(s) 128, 286, 508, 700, 719, 938, 1601, 2265
BtgI CCRYGG 3 cut(s) 509, 781, 2133
BtgZI GCGATG 1 cut(s) 1004
BtsCI GGATG 3 cut(s) 1612, 1726, 2143
BtsI GCAGTG 1 cut(s) 1125
BtsIMutI CAGTG 3 cut(s) 1125, 1352, 1692
BveI ACCTGC 2 cut(s) 654, 938
Cac8I GCNNGC 3 cut(s) 863, 1603, 2325
CaiI CAGNNNCTG 2 cut(s) 221, 2230
CciI TCATGA 1 cut(s) 1422
CfoI GCGC 2 cut(s) 757, 1440
Cfr10I RCCGGY 1 cut(s) 364
Cfr13I GGNCC 7 cut(s) 126, 284, 815, 999, 1096, 2089, 2113
CseI GACGC 1 cut(s) 1335
Csp6I GTAC 6 cut(s) 764, 778, 1350, 1360, 1386, 2414
CviQI GTAC 6 cut(s) 764, 778, 1350, 1360, 1386, 2414
DpnI GATC 6 cut(s) 411, 518, 1200, 1266, 1987, 2182
DpnII GATC 6 cut(s) 409, 516, 1198, 1264, 1985, 2180
DraI TTTAAA 1 cut(s) 1752
DraIII CACNNNGTG 1 cut(s) 1460
EaeI YGGCCR 2 cut(s) 506, 936
Eam1104I CTCTTC 6 cut(s) 12, 177, 829, 1336, 1662, 2168
EarI CTCTTC 6 cut(s) 12, 177, 829, 1336, 1662, 2168
EciI GGCGGA 1 cut(s) 2102
Ecl136II GAGCTC 1 cut(s) 451
Eco130I CCWWGG 3 cut(s) 509, 781, 2133
Eco147I AGGCCT 1 cut(s) 700
Eco24I GRGCYC 3 cut(s) 453, 1161, 1612
Eco47I GGWCC 5 cut(s) 815, 999, 1096, 2089, 2113
Eco53kI GAGCTC 1 cut(s) 451
Eco57I CTGAAG 3 cut(s) 101, 590, 2252
EcoICRI GAGCTC 1 cut(s) 451
EcoO109I RGGNCCY 3 cut(s) 284, 1096, 2113
EcoRI GAATTC 3 cut(s) 389, 571, 911
EcoRII CCWGG 4 cut(s) 700, 817, 938, 1815
EcoT14I CCWWGG 3 cut(s) 509, 781, 2133
EcoT38I GRGCYC 3 cut(s) 453, 1161, 1612
ErhI CCWWGG 3 cut(s) 509, 781, 2133
FalI AAGNNNNNCTT 2 cut(s) 2225, 2257
FaqI GGGAC 1 cut(s) 718
FbaI TGATCA 1 cut(s) 1198
FblI GTMKAC 2 cut(s) 501, 1917
Fnu4HI GCNGC 5 cut(s) 480, 639, 1247, 2162, 2289
FokI GGATG 3 cut(s) 1599, 1733, 2150
FriOI GRGCYC 3 cut(s) 453, 1161, 1612
Fsp4HI GCNGC 5 cut(s) 480, 639, 1247, 2162, 2289
FspBI CTAG 2 cut(s) 149, 1554
GlaI GCGC 2 cut(s) 756, 1439
GluI GCNGC 5 cut(s) 480, 639, 1247, 2162, 2289
GsaI CCCAGC 1 cut(s) 65
GsuI CTGGAG 2 cut(s) 597, 2099
HaeII RGCGCY 1 cut(s) 1441
HaeIII GGCC 8 cut(s) 128, 286, 508, 700, 719, 938, 1601, 2265
HapII CCGG 1 cut(s) 365
HgaI GACGC 1 cut(s) 1335
HhaI GCGC 2 cut(s) 757, 1440
Hin6I GCGC 2 cut(s) 755, 1438
HinP1I GCGC 2 cut(s) 755, 1438
HindIII AAGCTT 4 cut(s) 602, 1746, 1803, 2270
HinfI GANTC 4 cut(s) 964, 1144, 2237, 2375
HpaII CCGG 1 cut(s) 365
HphI GGTGA 8 cut(s) 38, 113, 296, 572, 803, 1634, 1718, 1818
Hpy166II GTNNAC 6 cut(s) 502, 778, 1350, 1726, 1918, 2403
Hpy8I GTNNAC 6 cut(s) 502, 778, 1350, 1726, 1918, 2403
Hpy99I CGWCG 2 cut(s) 1329, 1472
HpyAV CCTTC 6 cut(s) 77, 687, 954, 1429, 1894, 2227
HpyCH4III ACNGT 7 cut(s) 26, 686, 763, 1052, 1347, 1364, 1675
HpyCH4IV ACGT 2 cut(s) 852, 1459
HpyF10VI GCNNNNNNNGC 6 cut(s) 283, 647, 944, 1129, 1607, 1957
HpySE526I ACGT 2 cut(s) 852, 1459
HspAI GCGC 2 cut(s) 755, 1438
Ksp22I TGATCA 1 cut(s) 1198
Kzo9I GATC 6 cut(s) 409, 516, 1198, 1264, 1985, 2180
LguI GCTCTTC 2 cut(s) 829, 1336
LmnI GCTCC 3 cut(s) 551, 1583, 1957
Lsp1109I GCAGC 5 cut(s) 491, 625, 1258, 2173, 2275
LweI GCATC 4 cut(s) 336, 747, 1027, 1938
MaeI CTAG 2 cut(s) 149, 1554
MaeII ACGT 2 cut(s) 852, 1459
MaeIII GTNAC 2 cut(s) 26, 2056
MalI GATC 6 cut(s) 411, 518, 1200, 1266, 1987, 2182
MboI GATC 6 cut(s) 409, 516, 1198, 1264, 1985, 2180
MflI RGATCY 2 cut(s) 409, 1264
MhlI GDGCHC 6 cut(s) 453, 1161, 1279, 1612, 1638, 2405
MlsI TGGCCA 2 cut(s) 508, 938
MluNI TGGCCA 2 cut(s) 508, 938
MlyI GAGTC 1 cut(s) 1153
MmeI TCCRAC 5 cut(s) 705, 852, 1348, 1698, 2325
Mox20I TGGCCA 2 cut(s) 508, 938
MroXI GAANNNNTTC 2 cut(s) 393, 876
MscI TGGCCA 2 cut(s) 508, 938
MseI TTAA 5 cut(s) 290, 455, 1515, 1751, 2016
MslI CAYNNNNRTG 2 cut(s) 312, 1106
Msp20I TGGCCA 2 cut(s) 508, 938
MspCI CTTAAG 1 cut(s) 454
MspI CCGG 1 cut(s) 365
MspR9I CCNGG 4 cut(s) 702, 819, 940, 1817
Mva1269I GAATGC 4 cut(s) 81, 144, 266, 641
MvaI CCWGG 4 cut(s) 702, 819, 940, 1817
MvnI CGCG 1 cut(s) 650
MwoI GCNNNNNNNGC 6 cut(s) 283, 647, 944, 1129, 1607, 1957
NcoI CCATGG 3 cut(s) 509, 781, 2133
NdeII GATC 6 cut(s) 409, 516, 1198, 1264, 1985, 2180
NlaIV GGNNCC 3 cut(s) 285, 553, 1563
NmuCI GTSAC 1 cut(s) 26
NspI RCATGY 1 cut(s) 2002
PagI TCATGA 1 cut(s) 1422
PaqCI CACCTGC 1 cut(s) 938
PceI AGGCCT 1 cut(s) 700
PciSI GCTCTTC 2 cut(s) 829, 1336
PcsI WCGNNNNNNNCGW 2 cut(s) 1333, 1573
PctI GAATGC 4 cut(s) 81, 144, 266, 641
PdmI GAANNNNTTC 2 cut(s) 393, 876
PfeI GAWTC 3 cut(s) 964, 2237, 2375
PflMI CCANNNNNTGG 1 cut(s) 1975
PkrI GCNGC 5 cut(s) 481, 640, 1248, 2163, 2290
PleI GAGTC 1 cut(s) 1152
PpsI GAGTC 1 cut(s) 1152
PpuMI RGGWCCY 2 cut(s) 1096, 2113
PsiI TTATAA 1 cut(s) 486
Psp124BI GAGCTC 1 cut(s) 453
Psp5II RGGWCCY 2 cut(s) 1096, 2113
Psp6I CCWGG 4 cut(s) 700, 817, 938, 1815
PspFI CCCAGC 1 cut(s) 61
PspGI CCWGG 4 cut(s) 700, 817, 938, 1815
PspN4I GGNNCC 3 cut(s) 285, 553, 1563
PspPI GGNCC 7 cut(s) 126, 284, 815, 999, 1096, 2089, 2113
PspPPI RGGWCCY 2 cut(s) 1096, 2113
PstI CTGCAG 2 cut(s) 1120, 2226
PstNI CAGNNNCTG 2 cut(s) 221, 2230
PsuI RGATCY 2 cut(s) 409, 1264
RsaI GTAC 6 cut(s) 765, 779, 1351, 1361, 1387, 2415
RsaNI GTAC 6 cut(s) 764, 778, 1350, 1360, 1386, 2414
RseI CAYNNNNRTG 2 cut(s) 312, 1106
SacI GAGCTC 1 cut(s) 453
SapI GCTCTTC 2 cut(s) 829, 1336
SaqAI TTAA 5 cut(s) 290, 455, 1515, 1751, 2016
SatI GCNGC 5 cut(s) 480, 639, 1247, 2162, 2289
Sau3AI GATC 6 cut(s) 409, 516, 1198, 1264, 1985, 2180
Sau96I GGNCC 7 cut(s) 126, 284, 815, 999, 1096, 2089, 2113
ScaI AGTACT 1 cut(s) 765
SchI GAGTC 1 cut(s) 1153
ScrFI CCNGG 4 cut(s) 702, 819, 940, 1817
SduI GDGCHC 6 cut(s) 453, 1161, 1279, 1612, 1638, 2405
SfaNI GCATC 4 cut(s) 336, 747, 1027, 1938
SfcI CTRYAG 6 cut(s) 1011, 1032, 1116, 1363, 1617, 2222
SinI GGWCC 5 cut(s) 815, 999, 1096, 2089, 2113
SmiMI CAYNNNNRTG 2 cut(s) 312, 1106
SmlI CTYRAG 6 cut(s) 454, 1154, 1480, 1735, 2117, 2147
SmoI CTYRAG 6 cut(s) 454, 1154, 1480, 1735, 2117, 2147
SseBI AGGCCT 1 cut(s) 700
SsiI CCGC 2 cut(s) 1775, 2087
SspI AATATT 1 cut(s) 875
SspMI CTAG 2 cut(s) 149, 1554
SstI GAGCTC 1 cut(s) 453
StuI AGGCCT 1 cut(s) 700
StyD4I CCNGG 4 cut(s) 700, 817, 938, 1815
StyI CCWWGG 3 cut(s) 509, 781, 2133
TaaI ACNGT 7 cut(s) 26, 686, 763, 1052, 1347, 1364, 1675
TaiI ACGT 2 cut(s) 855, 1462
TaqI TCGA 5 cut(s) 519, 1260, 1567, 1946, 2373
TatI WGTACW 4 cut(s) 763, 1349, 1385, 2413
TfiI GAWTC 3 cut(s) 964, 2237, 2375
Tru1I TTAA 5 cut(s) 290, 455, 1515, 1751, 2016
Tru9I TTAA 5 cut(s) 290, 455, 1515, 1751, 2016
TscAI CASTG 3 cut(s) 1125, 1352, 1692
TseFI GTSAC 1 cut(s) 26
TseI GCWGC 5 cut(s) 479, 638, 1246, 2161, 2288
Tsp45I GTSAC 1 cut(s) 26
TspDTI ATGAA 8 cut(s) 17, 59, 382, 882, 1411, 1785, 1929, 2271
TspGWI ACGGA 3 cut(s) 173, 225, 564
TspRI CASTG 3 cut(s) 1125, 1352, 1692
Van91I CCANNNNNTGG 1 cut(s) 1975
Vha464I CTTAAG 1 cut(s) 454
VneI GTGCAC 1 cut(s) 2401
VpaK11BI GGWCC 5 cut(s) 815, 999, 1096, 2089, 2113
XapI RAATTY 6 cut(s) 176, 389, 571, 911, 1488, 1837
XbaI TCTAGA 2 cut(s) 148, 1553
XceI RCATGY 1 cut(s) 2002
XcmI CCANNNNNNNNNTGG 1 cut(s) 854
XmiI GTMKAC 2 cut(s) 501, 1917
XmnI GAANNNNTTC 2 cut(s) 393, 876
XspI CTAG 2 cut(s) 149, 1554
ZrmI AGTACT 1 cut(s) 765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.