Rmu_sc0000594.1_g000002

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000594.1
OG0000253
Physical Location & Seq
Forward (+)
12009 .. 14690
2682 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000594.1_g000002.1.cds

Sequence Viewer

Length: 2682 bp
atggatgctcaaggatttttttgttccgagcgagccccaaagaagcaagggaaagatcttgactacggtcctgaataccgaaggttgttacctttgaactcgatcagtctcacggtgtcccttgagagtaggcctacatgggttactactgcgaacttgaattctggtcaccttagattcgatcctcatgccgaagaaggtgttataaagaatgttcgctattttggtgctcattttgatgcccacacgttgatgaaggcaaacaatgaagaggacggtgacaacaagttcccagttggagaagatttttacccagcccttcatagaatgctgaagtgtaagaaagactggggtgaagacttctgttttcgtggtcgggccgtatttgagcatggcattctagaatggacggaaaccaccgtaactgaatttgaagagacattagataaaactggtatcttcggtgcagttgctgtttcccgttatctgtatgagtattgcagtaatgtgtggagggcattctgtgagctgtgggggcctttaacaaacacttttcaccatgcagatggggaaatgagcatctctttgcatgatttgaatgttattggaggattgtcggtttcaagagaaccatacgaagaattcattcctccaaacaaagatctggtgaaggttgaattataccattctacggttgcagagctcttgaggatttatacctatctgtgcatagcatataagagcatatatgtctactggccatggtggatcgaacatttttgtcgtggggagataatttacggagcctatggtgaatgtaagaattctgggattccgaaactgagagaaccaaagcttgagttgaagatttcaaagcaaggaagactagctgcattcctcgcgttctggcttagcatgttcgttctcccttccaacagtaagaagataagtcctgagactttctgtatggcctctttgatggcacagggcatcagagtatctcttgcgcccacagtactgggttatgtgtaccatggtcttggtgagatggctactcactctgttggtcctggctcttccaactcttgtttgcctatccactacatcattggctggcttggagaatattttctttatgtgtactcatcacgctctgataaagaattccccgtagggtatccccgtttggccaggtatgcaggtgttcaaggcaggagtctaagcattacagaggctcgtatggttttcaagaccaataaatctgtcgtgcatcgccctatctctgtggcctgcgaaaaagaccgttttttgcttgatgacgacaaattgcctgatgtgttatttgaggtcctcatctgtatgctttctgcagtgcttcctatgcgagttggcgagagtcttttccttgagccctattatccaaatagttttgctcgtcaatttggtcttgatcagagtgttccctctaacaaactatcctttagtgtttctaaaaggcaacaatgtggtgttgaggatctactgagggcacagactatcctgtataggaagaacactacctctcgtttctttatcccacgctcttctcgttctggacagtgtacatggtggtactgcaggtggtgttcaagagcttgtactccttacttggggctcttggtgtccaaaaccttcatgactttgaataagcgccctcttgaaaagtcacaacgtgttttcgtcgtgcagaacttgagagaaatttctactggtttgaaacaagaggttaaaatctcagaggtggaaaagtctcttgggaaatcttccagaaaggctcctcgaaaatctcgtgatggagcttcttgttctaaggccagcagggctcgtcccacagatgaacgtggtgagcacaaaagagttaggcttgaaaaggtagttgaagagactgtcgttatcccagtgaagtcttcttcaaatggtgagcgtgagttggatgttcacagtactttgagagcggaagccccaaatcaggtcattgagaatgaagcggttatgccaaccatttgtttgagtgaagcttcttcaaaccaggctctgtcaccattgtcaaatctggagaactccatatctaatttgcttggttcagaactgccgtccttcaagaagaattacctcattgctcaggttgtagacatttacgctaaagttttttcatcttcgacgccaaaggagctgttagtccatgttttggacatcagatcaagtcttgacatgcttcgccctgcaattaaacctctaaaagctggaaagctgcaacttgaagcgttcgtaactgctattgagaagatgctagaggtggcagaccagtcgttagatactactaaggtccttgagcagaaaactaccatggatgttgaacttgaggggtgtaataaatccaagggaagtttagagtctcagcttgtgggatcttccaaagagcttgaagccttgaaagccacggaatctgatatcatagcagatgagcagcgtgttcagaagaggcgatcagaatataatgctaagagacaatcgcttgaagacactctgcaggaactgaaggattccttgaaagagcatgatgaaagaggccagaagcttcaagaacacagagctgcttatatggcggagaaactccctgagattgagcaggcttcggcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

893

Amino Acids

101.16

Weight (kDa)

7.93

Isoelectric Point (pI)

44.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000253)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28912 FvH4_3g31370 FvH4_3g31371 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_6g28991 FvH4_7g16740 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610
malus_domestica MD10G1126100.v1.1 MD10G1312700.v1.1
rosa_chinensis RchiOBHm_Chr6g0276621
rosa_laevigata RLG00000023327 RLG00000023328
rosa_multiflora Rmu_co8195922.1_g000001 Rmu_co8303105.1_g000001 Rmu_co8385689.1_g000001 Rmu_sc0000385.1_g000010 Rmu_sc0000594.1_g000002 Rmu_sc0000857.1_g000010 Rmu_sc0001016.1_g000053 Rmu_sc0001468.1_g000028 Rmu_sc0001548.1_g000047 Rmu_sc0001548.1_g000048 Rmu_sc0002281.1_g000026 Rmu_sc0002281.1_g000027 Rmu_sc0002281.1_g000028 Rmu_sc0002478.1_g000001 Rmu_sc0002513.1_g000014 Rmu_sc0002662.1_g000017 Rmu_sc0003936.1_g000040 Rmu_sc0004084.1_g000047 Rmu_sc0005529.1_g000005 Rmu_sc0005529.1_g000006 Rmu_sc0005728.1_g000010 Rmu_sc0005747.1_g000017 Rmu_sc0005747.1_g000018 Rmu_sc0006385.1_g000001 Rmu_sc0006550.1_g000019 Rmu_sc0006803.1_g000033 Rmu_sc0007102.1_g000011 Rmu_sc0011018.1_g000001 Rmu_sc0011452.1_g000014 Rmu_sc0011805.1_g000001 Rmu_sc0011805.1_g000002 Rmu_sc0012566.1_g000001 Rmu_sc0013807.1_g000007 Rmu_sc0015817.1_g000001 Rmu_sc0015930.1_g000011 Rmu_sc0018873.1_g000003 Rmu_sc0020929.1_g000001
rosa_roxburghii Rroxscaffold_2G00081310 Rroxscaffold_2G00111790 Rroxscaffold_5G00349530 Rroxscaffold_5G00356270 Rroxscaffold_5G00356280 Rroxscaffold_5G00356290
rosa_rugosa Rorug01G0056400 Rorug01G0056500 Rorug02G0247000 Rorug03G0271700 Rorug04G0157900 Rorug05G0221700 Rorug05G0251400 Rorug05G0251400 Rorug06G0087300 Rorug07G0221900 Rorug07G0221900
rosa_samantha Rh1AG073200 Rh1AG073300 Rh1AG124600 Rh1AG124700 Rh1BG091900 Rh1CG031600 Rh1CG072100 Rh1CG072200 Rh1CG118800 Rh1CG276600 Rh1CG276700 Rh1DG077300 Rh2BG192000 Rh2BG330900 Rh2BG331000 Rh2BG517700 Rh2BG517800 Rh2CG188300 Rh2DG120800 Rh2DG323900 Rh2DG420700 Rh2DG433000 Rh2DG529400 Rh2DG529500 Rh3DG358100 Rh3DG358200 Rh4BG129700 Rh4BG129800 Rh4BG129900 Rh4BG166400 Rh4CG032000 Rh4DG024800 Rh4DG039500 Rh5AG223400 Rh5BG244500 Rh5BG244600 Rh5BG244700 Rh5CG363000 Rh5CG366900 Rh6AG117500 Rh6AG188600 Rh6AG188700 Rh6AG188800 Rh6BG111400 Rh6BG140800 Rh6BG178800 Rh6DG124100 Rh6DG210000 Rh7AG441200 Rh7BG296800 Rh7BG413900 Rh7BG414000 Rh7BG452400 Rh7DG234000 Rh7DG234100
rosa_wichuraiana Rw2G019410 Rw5G042140 Rw7G019590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 206
AarI CACCTGC 2 cut(s) 1190, 1608
Acc36I ACCTGC 2 cut(s) 1190, 1608
AccB7I CCANNNNNTGG 1 cut(s) 2227
AccBSI CCGCTC 1 cut(s) 1994
AccI GTMKAC 2 cut(s) 753, 2169
AccII CGCG 1 cut(s) 902
AciI CCGC 3 cut(s) 1994, 2027, 2645
AclWI GGATC 4 cut(s) 176, 776, 1524, 2455
AcoI YGGCCR 2 cut(s) 758, 1188
AcsI RAATTY 6 cut(s) 160, 428, 641, 823, 1163, 1740
AcuI CTGAAG 2 cut(s) 353, 2597
AcyI GRCGYC 1 cut(s) 2201
AdeI CACNNNGTG 1 cut(s) 1712
AfaI GTAC 7 cut(s) 1017, 1031, 1142, 1603, 1613, 1639, 1984
AfiI CCNNNNNNNGG 4 cut(s) 691, 1649, 2008, 2227
AflIII ACRYGT 2 cut(s) 246, 1711
AjnI CCWGG 3 cut(s) 1069, 1190, 2067
AjuI GAANNNNNNNTTGG 2 cut(s) 1776, 1808
Alw21I GWGCWC 3 cut(s) 232, 705, 1890
Alw26I GTCTC 7 cut(s) 113, 431, 950, 1794, 1916, 2439, 2539
AlwI GGATC 4 cut(s) 176, 776, 1524, 2455
AlwNI CAGNNNCTG 3 cut(s) 473, 2074, 2575
AoxI GGCC 9 cut(s) 131, 378, 536, 758, 969, 1188, 1287, 1851, 2608
ApeKI GCWGC 4 cut(s) 890, 2290, 2506, 2633
ApoI RAATTY 6 cut(s) 160, 428, 641, 823, 1163, 1740
Asp700I GAANNNNTTC 2 cut(s) 645, 1128
AspLEI GCGC 2 cut(s) 1009, 1692
AspS9I GGNCC 6 cut(s) 68, 378, 536, 1067, 1348, 2365
AvaII GGWCC 4 cut(s) 68, 1067, 1348, 2365
BaeGI GKGCMC 1 cut(s) 1531
BalI TGGCCA 2 cut(s) 760, 1190
BanII GRGCYC 5 cut(s) 37, 705, 1413, 1656, 1864
BauI CACGAG 1 cut(s) 1827
BbsI GAAGAC 4 cut(s) 363, 889, 1938, 2565
Bbv12I GWGCWC 3 cut(s) 232, 705, 1890
BbvI GCAGC 4 cut(s) 877, 2277, 2518, 2620
BccI CCATC 4 cut(s) 560, 973, 1042, 1826
BceAI ACGGC 2 cut(s) 365, 2116
BcgI CGANNNNNNTGC 4 cut(s) 170, 204, 2328, 2362
BciT130I CCWGG 3 cut(s) 1071, 1192, 2069
BciVI GTATCC 1 cut(s) 1188
BclI TGATCA 1 cut(s) 1450
BcoDI GTCTC 7 cut(s) 113, 431, 950, 1794, 1916, 2439, 2539
BfaI CTAG 3 cut(s) 401, 887, 2330
BfmI CTRYAG 3 cut(s) 1368, 1615, 2567
BfoI RGCGCY 1 cut(s) 1693
BfuAI ACCTGC 2 cut(s) 1190, 1608
BfuI GTATCC 1 cut(s) 1188
BglI GCCNNNNNGGC 1 cut(s) 1859
BglII AGATCT 2 cut(s) 55, 661
BisI GCNGC 4 cut(s) 891, 2291, 2507, 2634
BlpI GCTNAGC 1 cut(s) 911
BlsI GCNGC 4 cut(s) 892, 2292, 2508, 2635
BmcAI AGTACT 2 cut(s) 1017, 1984
Bme1390I CCNGG 3 cut(s) 1071, 1192, 2069
Bme18I GGWCC 4 cut(s) 68, 1067, 1348, 2365
BmgT120I GGNCC 6 cut(s) 68, 378, 536, 1067, 1348, 2365
BmiI GGNNCC 3 cut(s) 537, 805, 1815
BmrFI CCNGG 3 cut(s) 1071, 1192, 2069
BmrI ACTGGG 4 cut(s) 287, 358, 1028, 1931
BmsI GCATC 5 cut(s) 229, 588, 999, 1279, 2316
BmuI ACTGGG 4 cut(s) 287, 358, 1028, 1931
BoxI GACNNNNGTC 1 cut(s) 66
BpiI GAAGAC 4 cut(s) 363, 889, 1938, 2565
BpmI CTGGAG 1 cut(s) 2114
Bpu10I CCTNAGC 1 cut(s) 2160
Bpu1102I GCTNAGC 1 cut(s) 911
BpuEI CTTGAG 7 cut(s) 143, 727, 878, 1427, 1753, 2390, 2420
BsaHI GRCGYC 1 cut(s) 2201
BsaJI CCNNGG 5 cut(s) 761, 1033, 2385, 2418, 2478
Bsc4I CCNNNNNNNGG 4 cut(s) 691, 1649, 2008, 2227
Bse1I ACTGG 8 cut(s) 293, 353, 457, 761, 1023, 1753, 1937, 2344
Bse3DI GCAATG 1 cut(s) 2154
BseBI CCWGG 3 cut(s) 1071, 1192, 2069
BseDI CCNNGG 5 cut(s) 761, 1033, 2385, 2418, 2478
BseGI GGATG 3 cut(s) 10, 1978, 2395
BseLI CCNNNNNNNGG 4 cut(s) 691, 1649, 2008, 2227
BseMI GCAATG 1 cut(s) 2154
BseMII CTCAG 7 cut(s) 833, 945, 1514, 1788, 2174, 2450, 2649
BseNI ACTGG 8 cut(s) 293, 353, 457, 761, 1023, 1753, 1937, 2344
BseRI GAGGAG 1 cut(s) 1806
BseSI GKGCMC 1 cut(s) 1531
BseXI GCAGC 4 cut(s) 877, 2277, 2518, 2620
BseYI CCCAGC 1 cut(s) 313
BsgI GTGCAG 2 cut(s) 486, 1745
Bsh1236I CGCG 1 cut(s) 902
BshFI GGCC 9 cut(s) 133, 380, 538, 760, 971, 1190, 1289, 1853, 2610
BsiHKAI GWGCWC 3 cut(s) 232, 705, 1890
BslFI GGGAC 2 cut(s) 103, 1851
BslI CCNNNNNNNGG 4 cut(s) 691, 1649, 2008, 2227
BsmAI GTCTC 7 cut(s) 113, 431, 950, 1794, 1916, 2439, 2539
BsmFI GGGAC 2 cut(s) 103, 1851
BsmI GAATGC 4 cut(s) 333, 396, 518, 893
BsnI GGCC 9 cut(s) 133, 380, 538, 760, 971, 1190, 1289, 1853, 2610
Bsp1286I GDGCHC 8 cut(s) 37, 232, 705, 1413, 1531, 1656, 1864, 1890
Bsp1407I TGTACA 1 cut(s) 1601
Bsp1720I GCTNAGC 1 cut(s) 911
Bsp19I CCATGG 3 cut(s) 761, 1033, 2385
BspACI CCGC 3 cut(s) 1994, 2027, 2645
BspANI GGCC 9 cut(s) 133, 380, 538, 760, 971, 1190, 1289, 1853, 2610
BspCNI CTCAG 7 cut(s) 834, 946, 1515, 1787, 2173, 2449, 2650
BspFNI CGCG 1 cut(s) 902
BspHI TCATGA 1 cut(s) 1674
BspLI GGNNCC 3 cut(s) 537, 805, 1815
BspMAI CTGCAG 3 cut(s) 1372, 1619, 2571
BspMI ACCTGC 2 cut(s) 1190, 1608
BspPI GGATC 4 cut(s) 176, 776, 1524, 2455
BspQI GCTCTTC 2 cut(s) 1081, 1588
BsrBI CCGCTC 1 cut(s) 1994
BsrDI GCAATG 1 cut(s) 2154
BsrGI TGTACA 1 cut(s) 1601
BsrI ACTGG 8 cut(s) 293, 353, 457, 761, 1023, 1753, 1937, 2344
BssECI CCNNGG 5 cut(s) 761, 1033, 2385, 2418, 2478
BssNI GRCGYC 1 cut(s) 2201
BssSI CACGAG 1 cut(s) 1827
BssT1I CCWWGG 4 cut(s) 761, 1033, 2385, 2418
Bst2BI CACGAG 1 cut(s) 1827
Bst2UI CCWGG 3 cut(s) 1071, 1192, 2069
Bst6I CTCTTC 6 cut(s) 264, 429, 1081, 1588, 1914, 2513
BstACI GRCGYC 1 cut(s) 2201
BstAUI TGTACA 1 cut(s) 1601
BstC8I GCNNGC 5 cut(s) 33, 1115, 1291, 1855, 2670
BstDSI CCRYGG 4 cut(s) 761, 1033, 2385, 2478
BstEII GGTNACC 1 cut(s) 167
BstF5I GGATG 3 cut(s) 10, 1978, 2395
BstFNI CGCG 1 cut(s) 902
BstH2I RGCGCY 1 cut(s) 1693
BstHHI GCGC 2 cut(s) 1009, 1692
BstMAI GTCTC 7 cut(s) 113, 431, 950, 1794, 1916, 2439, 2539
BstMWI GCNNNNNNNGC 8 cut(s) 535, 899, 1196, 1381, 1859, 2209, 2474, 2642
BstNI CCWGG 3 cut(s) 1071, 1192, 2069
BstNSI RCATGY 2 cut(s) 919, 2254
BstPAI GACNNNNGTC 1 cut(s) 66
BstPI GGTNACC 1 cut(s) 167
BstSCI CCNGG 3 cut(s) 1069, 1190, 2067
BstSFI CTRYAG 3 cut(s) 1368, 1615, 2567
BstSLI GKGCMC 1 cut(s) 1531
BstUI CGCG 1 cut(s) 902
BstV1I GCAGC 4 cut(s) 877, 2277, 2518, 2620
BstV2I GAAGAC 4 cut(s) 363, 889, 1938, 2565
BstX2I RGATCY 4 cut(s) 55, 661, 1516, 2447
BstXI CCANNNNNNTGG 3 cut(s) 566, 1018, 1040
BstYI RGATCY 4 cut(s) 55, 661, 1516, 2447
BsuI GTATCC 1 cut(s) 1188
BsuRI GGCC 9 cut(s) 133, 380, 538, 760, 971, 1190, 1289, 1853, 2610
BtgI CCRYGG 4 cut(s) 761, 1033, 2385, 2478
BtgZI GCGATG 1 cut(s) 1256
BtsCI GGATG 3 cut(s) 10, 1978, 2395
BtsI GCAGTG 1 cut(s) 1377
BtsIMutI CAGTG 3 cut(s) 1377, 1604, 1944
BveI ACCTGC 2 cut(s) 1190, 1608
Cac8I GCNNGC 5 cut(s) 33, 1115, 1291, 1855, 2670
CaiI CAGNNNCTG 3 cut(s) 473, 2074, 2575
CciI TCATGA 1 cut(s) 1674
CfoI GCGC 2 cut(s) 1009, 1692
Cfr13I GGNCC 6 cut(s) 68, 378, 536, 1067, 1348, 2365
CseI GACGC 1 cut(s) 2209
Csp6I GTAC 7 cut(s) 1016, 1030, 1141, 1602, 1612, 1638, 1983
CviQI GTAC 7 cut(s) 1016, 1030, 1141, 1602, 1612, 1638, 1983
DraIII CACNNNGTG 1 cut(s) 1712
EaeI YGGCCR 2 cut(s) 758, 1188
Eam1104I CTCTTC 6 cut(s) 264, 429, 1081, 1588, 1914, 2513
EarI CTCTTC 6 cut(s) 264, 429, 1081, 1588, 1914, 2513
EciI GGCGGA 1 cut(s) 2660
Ecl136II GAGCTC 1 cut(s) 703
Eco130I CCWWGG 4 cut(s) 761, 1033, 2385, 2418
Eco147I AGGCCT 1 cut(s) 133
Eco24I GRGCYC 5 cut(s) 37, 705, 1413, 1656, 1864
Eco32I GATATC 1 cut(s) 2491
Eco47I GGWCC 4 cut(s) 68, 1067, 1348, 2365
Eco53kI GAGCTC 1 cut(s) 703
Eco57I CTGAAG 2 cut(s) 353, 2597
Eco91I GGTNACC 1 cut(s) 167
EcoICRI GAGCTC 1 cut(s) 703
EcoO109I RGGNCCY 3 cut(s) 536, 1348, 2365
EcoO65I GGTNACC 1 cut(s) 167
EcoRI GAATTC 4 cut(s) 160, 641, 823, 1163
EcoRII CCWGG 3 cut(s) 1069, 1190, 2067
EcoRV GATATC 1 cut(s) 2491
EcoT14I CCWWGG 4 cut(s) 761, 1033, 2385, 2418
EcoT38I GRGCYC 5 cut(s) 37, 705, 1413, 1656, 1864
ErhI CCWWGG 4 cut(s) 761, 1033, 2385, 2418
FalI AAGNNNNNCTT 2 cut(s) 2570, 2602
FaqI GGGAC 2 cut(s) 103, 1851
FbaI TGATCA 1 cut(s) 1450
FblI GTMKAC 2 cut(s) 753, 2169
Fnu4HI GCNGC 4 cut(s) 891, 2291, 2507, 2634
FokI GGATG 3 cut(s) 17, 1985, 2402
FriOI GRGCYC 5 cut(s) 37, 705, 1413, 1656, 1864
Fsp4HI GCNGC 4 cut(s) 891, 2291, 2507, 2634
FspBI CTAG 3 cut(s) 401, 887, 2330
GlaI GCGC 2 cut(s) 1008, 1691
GluI GCNGC 4 cut(s) 891, 2291, 2507, 2634
GsaI CCCAGC 1 cut(s) 317
GsuI CTGGAG 1 cut(s) 2114
HaeII RGCGCY 1 cut(s) 1693
HaeIII GGCC 9 cut(s) 133, 380, 538, 760, 971, 1190, 1289, 1853, 2610
HgaI GACGC 1 cut(s) 2209
HhaI GCGC 2 cut(s) 1009, 1692
Hin1I GRCGYC 1 cut(s) 2201
Hin6I GCGC 2 cut(s) 1007, 1690
HinP1I GCGC 2 cut(s) 1007, 1690
HindIII AAGCTT 3 cut(s) 854, 2055, 2615
HinfI GANTC 7 cut(s) 177, 832, 1216, 1396, 2432, 2483, 2582
Hpy166II GTNNAC 6 cut(s) 754, 1030, 1141, 1602, 1978, 2170
Hpy8I GTNNAC 6 cut(s) 754, 1030, 1141, 1602, 1978, 2170
Hpy99I CGWCG 2 cut(s) 1724, 2203
HpyAV CCTTC 9 cut(s) 75, 191, 250, 329, 664, 939, 1681, 2146, 2572
HpyCH4IV ACGT 3 cut(s) 248, 1711, 1879
HpyF10VI GCNNNNNNNGC 8 cut(s) 535, 899, 1196, 1381, 1859, 2209, 2474, 2642
HpySE526I ACGT 3 cut(s) 248, 1711, 1879
Hsp92I GRCGYC 1 cut(s) 2201
HspAI GCGC 2 cut(s) 1007, 1690
Ksp22I TGATCA 1 cut(s) 1450
LguI GCTCTTC 2 cut(s) 1081, 1588
LmnI GCTCC 4 cut(s) 803, 1819, 1835, 2209
Lsp1109I GCAGC 4 cut(s) 877, 2277, 2518, 2620
LweI GCATC 5 cut(s) 229, 588, 999, 1279, 2316
MaeI CTAG 3 cut(s) 401, 887, 2330
MaeII ACGT 3 cut(s) 248, 1711, 1879
MaeIII GTNAC 8 cut(s) 87, 142, 167, 278, 421, 1704, 2076, 2308
MbiI CCGCTC 1 cut(s) 1994
MflI RGATCY 4 cut(s) 55, 661, 1516, 2447
MhlI GDGCHC 8 cut(s) 37, 232, 705, 1413, 1531, 1656, 1864, 1890
MlsI TGGCCA 2 cut(s) 760, 1190
MluNI TGGCCA 2 cut(s) 760, 1190
MlyI GAGTC 3 cut(s) 1225, 1405, 2441
MmeI TCCRAC 4 cut(s) 277, 957, 1104, 1950
Mox20I TGGCCA 2 cut(s) 760, 1190
MroXI GAANNNNTTC 2 cut(s) 645, 1128
MscI TGGCCA 2 cut(s) 760, 1190
MseI TTAA 3 cut(s) 542, 1767, 2268
MslI CAYNNNNRTG 4 cut(s) 237, 251, 564, 1358
Msp20I TGGCCA 2 cut(s) 760, 1190
MspR9I CCNGG 3 cut(s) 1071, 1192, 2069
Mva1269I GAATGC 4 cut(s) 333, 396, 518, 893
MvaI CCWGG 3 cut(s) 1071, 1192, 2069
MvnI CGCG 1 cut(s) 902
MwoI GCNNNNNNNGC 8 cut(s) 535, 899, 1196, 1381, 1859, 2209, 2474, 2642
NcoI CCATGG 3 cut(s) 761, 1033, 2385
NlaIV GGNNCC 3 cut(s) 537, 805, 1815
NmuCI GTSAC 4 cut(s) 167, 278, 1704, 2076
NspI RCATGY 2 cut(s) 919, 2254
PagI TCATGA 1 cut(s) 1674
PaqCI CACCTGC 2 cut(s) 1190, 1608
PceI AGGCCT 1 cut(s) 133
PciSI GCTCTTC 2 cut(s) 1081, 1588
PcsI WCGNNNNNNNCGW 2 cut(s) 1585, 1825
PctI GAATGC 4 cut(s) 333, 396, 518, 893
PdmI GAANNNNTTC 2 cut(s) 645, 1128
PfeI GAWTC 4 cut(s) 177, 832, 2483, 2582
PflMI CCANNNNNTGG 1 cut(s) 2227
PkrI GCNGC 4 cut(s) 892, 2292, 2508, 2635
PleI GAGTC 3 cut(s) 1224, 1404, 2440
PpsI GAGTC 3 cut(s) 1224, 1404, 2440
PpuMI RGGWCCY 2 cut(s) 1348, 2365
PshAI GACNNNNGTC 1 cut(s) 66
PsiI TTATAA 1 cut(s) 206
Psp124BI GAGCTC 1 cut(s) 705
Psp5II RGGWCCY 2 cut(s) 1348, 2365
Psp6I CCWGG 3 cut(s) 1069, 1190, 2067
PspEI GGTNACC 1 cut(s) 167
PspFI CCCAGC 1 cut(s) 313
PspGI CCWGG 3 cut(s) 1069, 1190, 2067
PspN4I GGNNCC 3 cut(s) 537, 805, 1815
PspPI GGNCC 6 cut(s) 68, 378, 536, 1067, 1348, 2365
PspPPI RGGWCCY 2 cut(s) 1348, 2365
PstI CTGCAG 3 cut(s) 1372, 1619, 2571
PstNI CAGNNNCTG 3 cut(s) 473, 2074, 2575
PsuI RGATCY 4 cut(s) 55, 661, 1516, 2447
RsaI GTAC 7 cut(s) 1017, 1031, 1142, 1603, 1613, 1639, 1984
RsaNI GTAC 7 cut(s) 1016, 1030, 1141, 1602, 1612, 1638, 1983
RseI CAYNNNNRTG 4 cut(s) 237, 251, 564, 1358
SacI GAGCTC 1 cut(s) 705
SapI GCTCTTC 2 cut(s) 1081, 1588
SaqAI TTAA 3 cut(s) 542, 1767, 2268
SatI GCNGC 4 cut(s) 891, 2291, 2507, 2634
Sau96I GGNCC 6 cut(s) 68, 378, 536, 1067, 1348, 2365
ScaI AGTACT 2 cut(s) 1017, 1984
SchI GAGTC 3 cut(s) 1225, 1405, 2441
ScrFI CCNGG 3 cut(s) 1071, 1192, 2069
SduI GDGCHC 8 cut(s) 37, 232, 705, 1413, 1531, 1656, 1864, 1890
SfaNI GCATC 5 cut(s) 229, 588, 999, 1279, 2316
SfcI CTRYAG 3 cut(s) 1368, 1615, 2567
SinI GGWCC 4 cut(s) 68, 1067, 1348, 2365
SmiMI CAYNNNNRTG 4 cut(s) 237, 251, 564, 1358
SmlI CTYRAG 8 cut(s) 9, 122, 706, 857, 1406, 1732, 2369, 2399
SmoI CTYRAG 8 cut(s) 9, 122, 706, 857, 1406, 1732, 2369, 2399
SseBI AGGCCT 1 cut(s) 133
SsiI CCGC 3 cut(s) 1994, 2027, 2645
SspI AATATT 1 cut(s) 1127
SspMI CTAG 3 cut(s) 401, 887, 2330
SstI GAGCTC 1 cut(s) 705
StuI AGGCCT 1 cut(s) 133
StyD4I CCNGG 3 cut(s) 1069, 1190, 2067
StyI CCWWGG 4 cut(s) 761, 1033, 2385, 2418
TaiI ACGT 3 cut(s) 251, 1714, 1882
TaqI TCGA 5 cut(s) 101, 180, 771, 1819, 2198
TatI WGTACW 5 cut(s) 1015, 1140, 1601, 1637, 1982
TfiI GAWTC 4 cut(s) 177, 832, 2483, 2582
Tru1I TTAA 3 cut(s) 542, 1767, 2268
Tru9I TTAA 3 cut(s) 542, 1767, 2268
TscAI CASTG 3 cut(s) 1377, 1604, 1944
TseFI GTSAC 4 cut(s) 167, 278, 1704, 2076
TseI GCWGC 4 cut(s) 890, 2290, 2506, 2633
Tsp45I GTSAC 4 cut(s) 167, 278, 1704, 2076
TspDTI ATGAA 9 cut(s) 269, 282, 311, 634, 1663, 1890, 2037, 2181, 2616
TspGWI ACGGA 3 cut(s) 425, 816, 2495
TspRI CASTG 3 cut(s) 1377, 1604, 1944
Van91I CCANNNNNTGG 1 cut(s) 2227
VpaK11BI GGWCC 4 cut(s) 68, 1067, 1348, 2365
XapI RAATTY 6 cut(s) 160, 428, 641, 823, 1163, 1740
XbaI TCTAGA 1 cut(s) 400
XceI RCATGY 2 cut(s) 919, 2254
XcmI CCANNNNNNNNNTGG 1 cut(s) 1106
XmiI GTMKAC 2 cut(s) 753, 2169
XmnI GAANNNNTTC 2 cut(s) 645, 1128
XspI CTAG 3 cut(s) 401, 887, 2330
ZrmI AGTACT 2 cut(s) 1017, 1984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.