Rmu_sc0013807.1_g000007

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013807.1
OG0000253
Physical Location & Seq
Forward (+)
39492 .. 41654
2163 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013807.1_g000007.1.cds

Sequence Viewer

Length: 2163 bp
atgtggagcagtccacttggaagttccagtctgactgttgctagggggctagtttccctggtgaaggttgaattataccattctacagttgcagagctcttgaggatttatacctatctgtgcgctacttacaaaagcagatatgtctactggccatggtggatagaacatttttatcgtggggagataatttacggagcctatggtgaatgtaagaattctggggttccgaaattgagagaaccaaagcttgagttgaagatttcaaagcaaggaagactagctgcattcctcgcgttctggcttagcaggttcgttctcccttccaacagtaagaagataaggcctgagactttctatatggcctctttgatggcacagggcatcagggtatctcttgcgcccacagtactgggttatgtgtaccatggtcttggtgagatggctactcactctgctggtcctggctcttccaactcttgtttgcctatccactacgtcattggctggctcggagaatattttccttatctgtactcatcacgctctgataaagaattcccaggagggtatcctcgtttggccaggtatgcaggtattcaaggcaggagtctaagcatcacagaggctcgtatggttttcaggaccaacaaatctgtcgtgcatcgccctatctctgtagcctgtgaaaaagaccgttttttgcttgatgacgacaaattgcctgatgtgttatttgaggtcctcatctgtatgcgttctgcagtgctgcctgtgcgagttggcgagagtcttttccttgagccctattatccgaacaggtttgctcgtcaatttggtcttgatcagagtgttccctccaacaaactaacctttagtgtttccaaaaggcagcaatgtggtgttgaggatctgctgagggcacagactatcctgtataggaagaacactacctctcgtttctttatcccacgttcttctcgttctggacagtgtacatggtggtactgcaggtggtggtcaagagcttgtactccttacttgggtttatcagtgtcaaaaaccttcatgactttgaacaagcgccctcctgaaaagtcacagcgtgttttcgtcgtgcagaacttgagagaaatttctactggtttgaaacaagagattaaaatctcagaggtggaaacgtctctcgggaaatcttctagaaaggctcctcgaaaatctcgtgatggagcttcttgttctaaggccagcagggcccatcccacagatgaacgtggtggacacaaaagagttaggcttgaaaaggtagttgaagagattgtcgtcatcccagtgaagtcgtcttcaaatggtgagcatgagttggatgttcacagtcatttgagagcggaagatccaaatcaggtcattgagaatgaagcggttatgccaaccatctgtttgagtgaagcttcttcaaaccaggctctgtcaccattgtcaaatctggagaactccatatctaatttgcttggttcagaactgccatccttcaagaagaattacctcattgctcaggttgtagacatttacgctaaagtttcttcatcttcgacgccaaaggagctgttagtccatgttttggacattagatcaagtcttgacatgcttcaccctgcaattaagcttctgaaagctggaaagtcgcaacttaaagcgttcgtaactgctattgagaaaatgctggaggtggcggaccagtcgttagctactactgaggtccttgagcagaaaactaccatggatgttgaacttgaggtgtgtaagaaatccaagggaagtttagagtctcagcttgtgggatcttccaaagagcttgaagccttgaaagccacggaatctgatatcatagcagatgagcagcgtgttcagaagaggcgatcagaatataatgctaagagacaatctcttaaagacattctacaggaactgaaggattccttgaaagagcatgatgaaagaggccagaagcttcaagaagacagagctgcttatatggaggagaaactccctgagattgagcaggcttcggcttcgtataagttggaaacagaggcgtatcagagcctgttcgattctttgttcccgttattccaggtgtgcaccacctcagtacagacttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

720

Amino Acids

81.38

Weight (kDa)

9.09

Isoelectric Point (pI)

54.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000253)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28912 FvH4_3g31370 FvH4_3g31371 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_6g28991 FvH4_7g16740 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610
malus_domestica MD10G1126100.v1.1 MD10G1312700.v1.1
rosa_chinensis RchiOBHm_Chr6g0276621
rosa_laevigata RLG00000023327 RLG00000023328
rosa_multiflora Rmu_co8195922.1_g000001 Rmu_co8303105.1_g000001 Rmu_co8385689.1_g000001 Rmu_sc0000385.1_g000010 Rmu_sc0000594.1_g000002 Rmu_sc0000857.1_g000010 Rmu_sc0001016.1_g000053 Rmu_sc0001468.1_g000028 Rmu_sc0001548.1_g000047 Rmu_sc0001548.1_g000048 Rmu_sc0002281.1_g000026 Rmu_sc0002281.1_g000027 Rmu_sc0002281.1_g000028 Rmu_sc0002478.1_g000001 Rmu_sc0002513.1_g000014 Rmu_sc0002662.1_g000017 Rmu_sc0003936.1_g000040 Rmu_sc0004084.1_g000047 Rmu_sc0005529.1_g000005 Rmu_sc0005529.1_g000006 Rmu_sc0005728.1_g000010 Rmu_sc0005747.1_g000017 Rmu_sc0005747.1_g000018 Rmu_sc0006385.1_g000001 Rmu_sc0006550.1_g000019 Rmu_sc0006803.1_g000033 Rmu_sc0007102.1_g000011 Rmu_sc0011018.1_g000001 Rmu_sc0011452.1_g000014 Rmu_sc0011805.1_g000001 Rmu_sc0011805.1_g000002 Rmu_sc0012566.1_g000001 Rmu_sc0013807.1_g000007 Rmu_sc0015817.1_g000001 Rmu_sc0015930.1_g000011 Rmu_sc0018873.1_g000003 Rmu_sc0020929.1_g000001
rosa_roxburghii Rroxscaffold_2G00081310 Rroxscaffold_2G00111790 Rroxscaffold_5G00349530 Rroxscaffold_5G00356270 Rroxscaffold_5G00356280 Rroxscaffold_5G00356290
rosa_rugosa Rorug01G0056400 Rorug01G0056500 Rorug02G0247000 Rorug03G0271700 Rorug04G0157900 Rorug05G0221700 Rorug05G0251400 Rorug05G0251400 Rorug06G0087300 Rorug07G0221900 Rorug07G0221900
rosa_samantha Rh1AG073200 Rh1AG073300 Rh1AG124600 Rh1AG124700 Rh1BG091900 Rh1CG031600 Rh1CG072100 Rh1CG072200 Rh1CG118800 Rh1CG276600 Rh1CG276700 Rh1DG077300 Rh2BG192000 Rh2BG330900 Rh2BG331000 Rh2BG517700 Rh2BG517800 Rh2CG188300 Rh2DG120800 Rh2DG323900 Rh2DG420700 Rh2DG433000 Rh2DG529400 Rh2DG529500 Rh3DG358100 Rh3DG358200 Rh4BG129700 Rh4BG129800 Rh4BG129900 Rh4BG166400 Rh4CG032000 Rh4DG024800 Rh4DG039500 Rh5AG223400 Rh5BG244500 Rh5BG244600 Rh5BG244700 Rh5CG363000 Rh5CG366900 Rh6AG117500 Rh6AG188600 Rh6AG188700 Rh6AG188800 Rh6BG111400 Rh6BG140800 Rh6BG178800 Rh6DG124100 Rh6DG210000 Rh7AG441200 Rh7BG296800 Rh7BG413900 Rh7BG414000 Rh7BG452400 Rh7DG234000 Rh7DG234100
rosa_wichuraiana Rw2G019410 Rw5G042140 Rw7G019590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1002
Acc36I ACCTGC 3 cut(s) 300, 584, 1002
AccB7I CCANNNNNTGG 1 cut(s) 1621
AccBSI CCGCTC 1 cut(s) 1388
AccI GTMKAC 2 cut(s) 147, 1563
AccII CGCG 1 cut(s) 296
AciI CCGC 3 cut(s) 1388, 1421, 1733
AclWI GGATC 3 cut(s) 918, 1388, 1849
AcoI YGGCCR 2 cut(s) 152, 582
AcsI RAATTY 3 cut(s) 217, 557, 1134
AcuI CTGAAG 1 cut(s) 1991
AcyI GRCGYC 1 cut(s) 1595
AdeI CACNNNGTG 1 cut(s) 1106
AfaI GTAC 7 cut(s) 411, 425, 536, 997, 1007, 1033, 2154
AfiI CCNNNNNNNGG 3 cut(s) 64, 1043, 1621
AjnI CCWGG 6 cut(s) 57, 463, 562, 584, 1461, 2133
Alw21I GWGCWC 2 cut(s) 99, 2144
Alw26I GTCTC 4 cut(s) 344, 1188, 1833, 1933
Alw44I GTGCAC 1 cut(s) 2140
AlwI GGATC 3 cut(s) 918, 1388, 1849
AlwNI CAGNNNCTG 3 cut(s) 1468, 1969, 2107
Ama87I CYCGRG 1 cut(s) 1187
AoxI GGCC 7 cut(s) 152, 344, 363, 582, 1245, 1254, 2002
ApaI GGGCCC 1 cut(s) 1258
ApaLI GTGCAC 1 cut(s) 2140
ApeKI GCWGC 5 cut(s) 284, 769, 892, 1900, 2027
ApoI RAATTY 3 cut(s) 217, 557, 1134
Asp700I GAANNNNTTC 1 cut(s) 522
AspLEI GCGC 3 cut(s) 125, 403, 1086
AspS9I GGNCC 7 cut(s) 461, 645, 742, 1254, 1255, 1735, 1759
AsuHPI GGTGA 6 cut(s) 73, 218, 449, 1364, 1464, 1643
AvaI CYCGRG 1 cut(s) 1187
AvaII GGWCC 5 cut(s) 461, 645, 742, 1735, 1759
BaeGI GKGCMC 3 cut(s) 925, 1258, 2144
BalI TGGCCA 2 cut(s) 154, 584
BanII GRGCYC 3 cut(s) 99, 807, 1258
BauI CACGAG 1 cut(s) 1221
BbsI GAAGAC 3 cut(s) 283, 1335, 2025
Bbv12I GWGCWC 2 cut(s) 99, 2144
BbvCI CCTCAGC 1 cut(s) 917
BbvI GCAGC 5 cut(s) 271, 756, 904, 1912, 2014
BccI CCATC 6 cut(s) 367, 436, 1220, 1266, 1442, 1534
BciT130I CCWGG 6 cut(s) 59, 465, 564, 586, 1463, 2135
BciVI GTATCC 1 cut(s) 582
BclI TGATCA 1 cut(s) 844
BcoDI GTCTC 4 cut(s) 344, 1188, 1833, 1933
BfaI CTAG 4 cut(s) 42, 50, 281, 1200
BfmI CTRYAG 5 cut(s) 84, 678, 762, 1009, 1961
BfoI RGCGCY 1 cut(s) 1087
BfuAI ACCTGC 3 cut(s) 300, 584, 1002
BfuI GTATCC 1 cut(s) 582
BglI GCCNNNNNGGC 1 cut(s) 1253
BisI GCNGC 5 cut(s) 285, 770, 893, 1901, 2028
BlpI GCTNAGC 1 cut(s) 305
BlsI GCNGC 5 cut(s) 286, 771, 894, 1902, 2029
BmcAI AGTACT 1 cut(s) 411
Bme1390I CCNGG 6 cut(s) 59, 465, 564, 586, 1463, 2135
Bme18I GGWCC 5 cut(s) 461, 645, 742, 1735, 1759
BmeT110I CYCGRG 1 cut(s) 1187
BmgT120I GGNCC 7 cut(s) 461, 645, 742, 1254, 1255, 1735, 1759
BmiI GGNNCC 4 cut(s) 199, 228, 1209, 1256
BmrFI CCNGG 6 cut(s) 59, 465, 564, 586, 1463, 2135
BmrI ACTGGG 2 cut(s) 422, 1325
BmsI GCATC 3 cut(s) 393, 627, 673
BmuI ACTGGG 2 cut(s) 422, 1325
BpiI GAAGAC 3 cut(s) 283, 1335, 2025
BplI GAGNNNNNCTC 2 cut(s) 1930, 1962
BpmI CTGGAG 2 cut(s) 1508, 1745
Bpu10I CCTNAGC 2 cut(s) 917, 1554
Bpu1102I GCTNAGC 1 cut(s) 305
BpuEI CTTGAG 6 cut(s) 121, 272, 821, 1147, 1784, 1814
BsaBI GATNNNNATC 2 cut(s) 1163, 1398
BsaHI GRCGYC 1 cut(s) 1595
BsaJI CCNNGG 7 cut(s) 57, 155, 427, 562, 1779, 1812, 1872
Bsc4I CCNNNNNNNGG 3 cut(s) 64, 1043, 1621
Bse1I ACTGG 6 cut(s) 27, 155, 417, 1147, 1331, 1738
Bse3DI GCAATG 2 cut(s) 902, 1548
Bse8I GATNNNNATC 2 cut(s) 1163, 1398
BseBI CCWGG 6 cut(s) 59, 465, 564, 586, 1463, 2135
BseDI CCNNGG 7 cut(s) 57, 155, 427, 562, 1779, 1812, 1872
BseGI GGATG 5 cut(s) 1258, 1326, 1372, 1526, 1789
BseJI GATNNNNATC 2 cut(s) 1163, 1398
BseLI CCNNNNNNNGG 3 cut(s) 64, 1043, 1621
BseMI GCAATG 2 cut(s) 902, 1548
BseMII CTCAG 8 cut(s) 339, 908, 1182, 1568, 1746, 1844, 2043, 2163
BseNI ACTGG 6 cut(s) 27, 155, 417, 1147, 1331, 1738
BseRI GAGGAG 2 cut(s) 1200, 2054
BseSI GKGCMC 3 cut(s) 925, 1258, 2144
BseXI GCAGC 5 cut(s) 271, 756, 904, 1912, 2014
BsgI GTGCAG 1 cut(s) 1139
Bsh1236I CGCG 1 cut(s) 296
BshFI GGCC 7 cut(s) 154, 346, 365, 584, 1247, 1256, 2004
BsiHKAI GWGCWC 2 cut(s) 99, 2144
BsiHKCI CYCGRG 1 cut(s) 1187
BslI CCNNNNNNNGG 3 cut(s) 64, 1043, 1621
BsmAI GTCTC 4 cut(s) 344, 1188, 1833, 1933
BsmBI CGTCTC 1 cut(s) 1188
BsmI GAATGC 1 cut(s) 287
BsnI GGCC 7 cut(s) 154, 346, 365, 584, 1247, 1256, 2004
BsoBI CYCGRG 1 cut(s) 1187
Bsp120I GGGCCC 1 cut(s) 1254
Bsp1286I GDGCHC 5 cut(s) 99, 807, 925, 1258, 2144
Bsp1407I TGTACA 1 cut(s) 995
Bsp143I GATC 6 cut(s) 844, 910, 1393, 1631, 1841, 1919
Bsp1720I GCTNAGC 1 cut(s) 305
Bsp19I CCATGG 3 cut(s) 155, 427, 1779
BspACI CCGC 3 cut(s) 1388, 1421, 1733
BspANI GGCC 7 cut(s) 154, 346, 365, 584, 1247, 1256, 2004
BspCNI CTCAG 8 cut(s) 340, 909, 1181, 1567, 1747, 1843, 2044, 2162
BspFNI CGCG 1 cut(s) 296
BspHI TCATGA 1 cut(s) 1068
BspLI GGNNCC 4 cut(s) 199, 228, 1209, 1256
BspMAI CTGCAG 2 cut(s) 766, 1013
BspMI ACCTGC 3 cut(s) 300, 584, 1002
BspPI GGATC 3 cut(s) 918, 1388, 1849
BspQI GCTCTTC 1 cut(s) 475
BsrBI CCGCTC 1 cut(s) 1388
BsrDI GCAATG 2 cut(s) 902, 1548
BsrGI TGTACA 1 cut(s) 995
BsrI ACTGG 6 cut(s) 27, 155, 417, 1147, 1331, 1738
BssECI CCNNGG 7 cut(s) 57, 155, 427, 562, 1779, 1812, 1872
BssMI GATC 6 cut(s) 844, 910, 1393, 1631, 1841, 1919
BssNI GRCGYC 1 cut(s) 1595
BssSI CACGAG 1 cut(s) 1221
BssT1I CCWWGG 4 cut(s) 155, 427, 1779, 1812
Bst2BI CACGAG 1 cut(s) 1221
Bst2UI CCWGG 6 cut(s) 59, 465, 564, 586, 1463, 2135
Bst4CI ACNGT 7 cut(s) 37, 88, 332, 409, 698, 993, 1376
Bst6I CTCTTC 3 cut(s) 475, 1308, 1907
BstACI GRCGYC 1 cut(s) 1595
BstAUI TGTACA 1 cut(s) 995
BstC8I GCNNGC 3 cut(s) 509, 1249, 2064
BstDSI CCRYGG 4 cut(s) 155, 427, 1779, 1872
BstENI CCTNNNNNAGG 1 cut(s) 62
BstF5I GGATG 5 cut(s) 1258, 1326, 1372, 1526, 1789
BstFNI CGCG 1 cut(s) 296
BstH2I RGCGCY 1 cut(s) 1087
BstHHI GCGC 3 cut(s) 125, 403, 1086
BstKTI GATC 6 cut(s) 847, 913, 1396, 1634, 1844, 1922
BstMAI GTCTC 4 cut(s) 344, 1188, 1833, 1933
BstMBI GATC 6 cut(s) 844, 910, 1393, 1631, 1841, 1919
BstMWI GCNNNNNNNGC 6 cut(s) 293, 590, 775, 1253, 1603, 1868
BstNI CCWGG 6 cut(s) 59, 465, 564, 586, 1463, 2135
BstNSI RCATGY 1 cut(s) 1648
BstSCI CCNGG 6 cut(s) 57, 463, 562, 584, 1461, 2133
BstSFI CTRYAG 5 cut(s) 84, 678, 762, 1009, 1961
BstSLI GKGCMC 3 cut(s) 925, 1258, 2144
BstUI CGCG 1 cut(s) 296
BstV1I GCAGC 5 cut(s) 271, 756, 904, 1912, 2014
BstV2I GAAGAC 3 cut(s) 283, 1335, 2025
BstX2I RGATCY 3 cut(s) 910, 1393, 1841
BstXI CCANNNNNNTGG 2 cut(s) 412, 434
BstYI RGATCY 3 cut(s) 910, 1393, 1841
BsuI GTATCC 1 cut(s) 582
BsuRI GGCC 7 cut(s) 154, 346, 365, 584, 1247, 1256, 2004
BtgI CCRYGG 4 cut(s) 155, 427, 1779, 1872
BtgZI GCGATG 1 cut(s) 650
BtsCI GGATG 5 cut(s) 1258, 1326, 1372, 1526, 1789
BtsI GCAGTG 1 cut(s) 771
BtsIMutI CAGTG 4 cut(s) 771, 998, 1059, 1338
BveI ACCTGC 3 cut(s) 300, 584, 1002
Cac8I GCNNGC 3 cut(s) 509, 1249, 2064
CaiI CAGNNNCTG 3 cut(s) 1468, 1969, 2107
CciI TCATGA 1 cut(s) 1068
CfoI GCGC 3 cut(s) 125, 403, 1086
Cfr13I GGNCC 7 cut(s) 461, 645, 742, 1254, 1255, 1735, 1759
CseI GACGC 1 cut(s) 1603
Csp6I GTAC 7 cut(s) 410, 424, 535, 996, 1006, 1032, 2153
CviAII CATG 9 cut(s) 156, 428, 999, 1069, 1358, 1616, 1645, 1780, 1991
CviQI GTAC 7 cut(s) 410, 424, 535, 996, 1006, 1032, 2153
DpnI GATC 6 cut(s) 846, 912, 1395, 1633, 1843, 1921
DpnII GATC 6 cut(s) 844, 910, 1393, 1631, 1841, 1919
DraIII CACNNNGTG 1 cut(s) 1106
EaeI YGGCCR 2 cut(s) 152, 582
Eam1104I CTCTTC 3 cut(s) 475, 1308, 1907
EarI CTCTTC 3 cut(s) 475, 1308, 1907
EciI GGCGGA 1 cut(s) 1748
Ecl136II GAGCTC 1 cut(s) 97
Eco130I CCWWGG 4 cut(s) 155, 427, 1779, 1812
Eco147I AGGCCT 1 cut(s) 346
Eco24I GRGCYC 3 cut(s) 99, 807, 1258
Eco32I GATATC 1 cut(s) 1885
Eco47I GGWCC 5 cut(s) 461, 645, 742, 1735, 1759
Eco53kI GAGCTC 1 cut(s) 97
Eco57I CTGAAG 1 cut(s) 1991
Eco88I CYCGRG 1 cut(s) 1187
EcoICRI GAGCTC 1 cut(s) 97
EcoNI CCTNNNNNAGG 1 cut(s) 62
EcoO109I RGGNCCY 3 cut(s) 742, 1254, 1759
EcoRI GAATTC 2 cut(s) 217, 557
EcoRII CCWGG 6 cut(s) 57, 463, 562, 584, 1461, 2133
EcoRV GATATC 1 cut(s) 1885
EcoT14I CCWWGG 4 cut(s) 155, 427, 1779, 1812
EcoT38I GRGCYC 3 cut(s) 99, 807, 1258
ErhI CCWWGG 4 cut(s) 155, 427, 1779, 1812
Esp3I CGTCTC 1 cut(s) 1188
FaeI CATG 9 cut(s) 159, 431, 1002, 1072, 1361, 1619, 1648, 1783, 1994
FalI AAGNNNNNCTT 2 cut(s) 1964, 1996
FatI CATG 9 cut(s) 155, 427, 998, 1068, 1357, 1615, 1644, 1779, 1990
FbaI TGATCA 1 cut(s) 844
FblI GTMKAC 2 cut(s) 147, 1563
Fnu4HI GCNGC 5 cut(s) 285, 770, 893, 1901, 2028
FokI GGATG 5 cut(s) 1245, 1313, 1379, 1513, 1796
FriOI GRGCYC 3 cut(s) 99, 807, 1258
Fsp4HI GCNGC 5 cut(s) 285, 770, 893, 1901, 2028
FspBI CTAG 4 cut(s) 42, 50, 281, 1200
GlaI GCGC 3 cut(s) 124, 402, 1085
GluI GCNGC 5 cut(s) 285, 770, 893, 1901, 2028
GsuI CTGGAG 2 cut(s) 1508, 1745
HaeII RGCGCY 1 cut(s) 1087
HaeIII GGCC 7 cut(s) 154, 346, 365, 584, 1247, 1256, 2004
HgaI GACGC 1 cut(s) 1603
HhaI GCGC 3 cut(s) 125, 403, 1086
Hin1I GRCGYC 1 cut(s) 1595
Hin1II CATG 9 cut(s) 159, 431, 1002, 1072, 1361, 1619, 1648, 1783, 1994
Hin6I GCGC 3 cut(s) 123, 401, 1084
HinP1I GCGC 3 cut(s) 123, 401, 1084
HindIII AAGCTT 4 cut(s) 248, 1449, 1664, 2009
HinfI GANTC 6 cut(s) 610, 790, 1826, 1877, 1976, 2114
HphI GGTGA 6 cut(s) 73, 218, 449, 1364, 1464, 1643
Hpy166II GTNNAC 8 cut(s) 14, 148, 424, 996, 1280, 1372, 1564, 2142
Hpy8I GTNNAC 8 cut(s) 14, 148, 424, 996, 1280, 1372, 1564, 2142
Hpy99I CGWCG 2 cut(s) 1118, 1597
HpyAV CCTTC 5 cut(s) 58, 333, 1075, 1540, 1966
HpyCH4III ACNGT 7 cut(s) 37, 88, 332, 409, 698, 993, 1376
HpyCH4IV ACGT 4 cut(s) 498, 973, 1181, 1273
HpyCH4V TGCA 9 cut(s) 92, 287, 593, 664, 764, 1011, 1120, 1658, 2142
HpyF10VI GCNNNNNNNGC 6 cut(s) 293, 590, 775, 1253, 1603, 1868
HpySE526I ACGT 4 cut(s) 498, 973, 1181, 1273
Hsp92I GRCGYC 1 cut(s) 1595
Hsp92II CATG 9 cut(s) 159, 431, 1002, 1072, 1361, 1619, 1648, 1783, 1994
HspAI GCGC 3 cut(s) 123, 401, 1084
Ksp22I TGATCA 1 cut(s) 844
Kzo9I GATC 6 cut(s) 844, 910, 1393, 1631, 1841, 1919
LguI GCTCTTC 1 cut(s) 475
LmnI GCTCC 5 cut(s) 6, 197, 1213, 1229, 1603
Lsp1109I GCAGC 5 cut(s) 271, 756, 904, 1912, 2014
LweI GCATC 3 cut(s) 393, 627, 673
MaeI CTAG 4 cut(s) 42, 50, 281, 1200
MaeII ACGT 4 cut(s) 498, 973, 1181, 1273
MaeIII GTNAC 3 cut(s) 1098, 1470, 1702
MalI GATC 6 cut(s) 846, 912, 1395, 1633, 1843, 1921
MbiI CCGCTC 1 cut(s) 1388
MboI GATC 6 cut(s) 844, 910, 1393, 1631, 1841, 1919
MflI RGATCY 3 cut(s) 910, 1393, 1841
MhlI GDGCHC 5 cut(s) 99, 807, 925, 1258, 2144
MlsI TGGCCA 2 cut(s) 154, 584
MluNI TGGCCA 2 cut(s) 154, 584
MlyI GAGTC 3 cut(s) 619, 799, 1835
MmeI TCCRAC 5 cut(s) 351, 498, 885, 1344, 2064
Mox20I TGGCCA 2 cut(s) 154, 584
MroXI GAANNNNTTC 1 cut(s) 522
MscI TGGCCA 2 cut(s) 154, 584
MseI TTAA 4 cut(s) 1161, 1662, 1692, 1950
MslI CAYNNNNRTG 2 cut(s) 752, 1331
Msp20I TGGCCA 2 cut(s) 154, 584
MspR9I CCNGG 6 cut(s) 59, 465, 564, 586, 1463, 2135
Mva1269I GAATGC 1 cut(s) 287
MvaI CCWGG 6 cut(s) 59, 465, 564, 586, 1463, 2135
MvnI CGCG 1 cut(s) 296
MwoI GCNNNNNNNGC 6 cut(s) 293, 590, 775, 1253, 1603, 1868
NcoI CCATGG 3 cut(s) 155, 427, 1779
NdeII GATC 6 cut(s) 844, 910, 1393, 1631, 1841, 1919
NlaIII CATG 9 cut(s) 159, 431, 1002, 1072, 1361, 1619, 1648, 1783, 1994
NlaIV GGNNCC 4 cut(s) 199, 228, 1209, 1256
NmuCI GTSAC 2 cut(s) 1098, 1470
NspI RCATGY 1 cut(s) 1648
PagI TCATGA 1 cut(s) 1068
PaqCI CACCTGC 1 cut(s) 1002
PceI AGGCCT 1 cut(s) 346
PciSI GCTCTTC 1 cut(s) 475
PcsI WCGNNNNNNNCGW 2 cut(s) 979, 1219
PctI GAATGC 1 cut(s) 287
PdmI GAANNNNTTC 1 cut(s) 522
PfeI GAWTC 3 cut(s) 1877, 1976, 2114
PflMI CCANNNNNTGG 1 cut(s) 1621
PkrI GCNGC 5 cut(s) 286, 771, 894, 1902, 2029
PleI GAGTC 3 cut(s) 618, 798, 1834
PpsI GAGTC 3 cut(s) 618, 798, 1834
PpuMI RGGWCCY 2 cut(s) 742, 1759
Psp124BI GAGCTC 1 cut(s) 99
Psp5II RGGWCCY 2 cut(s) 742, 1759
Psp6I CCWGG 6 cut(s) 57, 463, 562, 584, 1461, 2133
PspGI CCWGG 6 cut(s) 57, 463, 562, 584, 1461, 2133
PspN4I GGNNCC 4 cut(s) 199, 228, 1209, 1256
PspOMI GGGCCC 1 cut(s) 1254
PspPI GGNCC 7 cut(s) 461, 645, 742, 1254, 1255, 1735, 1759
PspPPI RGGWCCY 2 cut(s) 742, 1759
PstI CTGCAG 2 cut(s) 766, 1013
PstNI CAGNNNCTG 3 cut(s) 1468, 1969, 2107
PsuI RGATCY 3 cut(s) 910, 1393, 1841
RsaI GTAC 7 cut(s) 411, 425, 536, 997, 1007, 1033, 2154
RsaNI GTAC 7 cut(s) 410, 424, 535, 996, 1006, 1032, 2153
RseI CAYNNNNRTG 2 cut(s) 752, 1331
SacI GAGCTC 1 cut(s) 99
SapI GCTCTTC 1 cut(s) 475
SaqAI TTAA 4 cut(s) 1161, 1662, 1692, 1950
SatI GCNGC 5 cut(s) 285, 770, 893, 1901, 2028
Sau3AI GATC 6 cut(s) 844, 910, 1393, 1631, 1841, 1919
Sau96I GGNCC 7 cut(s) 461, 645, 742, 1254, 1255, 1735, 1759
ScaI AGTACT 1 cut(s) 411
SchI GAGTC 3 cut(s) 619, 799, 1835
ScrFI CCNGG 6 cut(s) 59, 465, 564, 586, 1463, 2135
SduI GDGCHC 5 cut(s) 99, 807, 925, 1258, 2144
SfaNI GCATC 3 cut(s) 393, 627, 673
SfcI CTRYAG 5 cut(s) 84, 678, 762, 1009, 1961
SfiI GGCCNNNNNGGCC 1 cut(s) 1253
SinI GGWCC 5 cut(s) 461, 645, 742, 1735, 1759
SmiMI CAYNNNNRTG 2 cut(s) 752, 1331
SmlI CTYRAG 6 cut(s) 100, 251, 800, 1126, 1763, 1793
SmoI CTYRAG 6 cut(s) 100, 251, 800, 1126, 1763, 1793
SseBI AGGCCT 1 cut(s) 346
SsiI CCGC 3 cut(s) 1388, 1421, 1733
SspI AATATT 1 cut(s) 521
SspMI CTAG 4 cut(s) 42, 50, 281, 1200
SstI GAGCTC 1 cut(s) 99
StuI AGGCCT 1 cut(s) 346
StyD4I CCNGG 6 cut(s) 57, 463, 562, 584, 1461, 2133
StyI CCWWGG 4 cut(s) 155, 427, 1779, 1812
TaaI ACNGT 7 cut(s) 37, 88, 332, 409, 698, 993, 1376
TaiI ACGT 4 cut(s) 501, 976, 1184, 1276
TaqI TCGA 3 cut(s) 1213, 1592, 2112
TatI WGTACW 5 cut(s) 409, 534, 995, 1031, 2152
TfiI GAWTC 3 cut(s) 1877, 1976, 2114
Tru1I TTAA 4 cut(s) 1161, 1662, 1692, 1950
Tru9I TTAA 4 cut(s) 1161, 1662, 1692, 1950
TscAI CASTG 4 cut(s) 771, 998, 1059, 1338
TseFI GTSAC 2 cut(s) 1098, 1470
TseI GCWGC 5 cut(s) 284, 769, 892, 1900, 2027
Tsp45I GTSAC 2 cut(s) 1098, 1470
TspDTI ATGAA 5 cut(s) 1057, 1284, 1431, 1575, 2010
TspGWI ACGGA 2 cut(s) 210, 1889
TspRI CASTG 4 cut(s) 771, 998, 1059, 1338
Van91I CCANNNNNTGG 1 cut(s) 1621
VneI GTGCAC 1 cut(s) 2140
VpaK11BI GGWCC 5 cut(s) 461, 645, 742, 1735, 1759
XagI CCTNNNNNAGG 1 cut(s) 62
XapI RAATTY 3 cut(s) 217, 557, 1134
XbaI TCTAGA 1 cut(s) 1199
XceI RCATGY 1 cut(s) 1648
XcmI CCANNNNNNNNNTGG 1 cut(s) 500
XmiI GTMKAC 2 cut(s) 147, 1563
XmnI GAANNNNTTC 1 cut(s) 522
XspI CTAG 4 cut(s) 42, 50, 281, 1200
ZrmI AGTACT 1 cut(s) 411
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.