Rh1CG276600

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0000253
Physical Location & Seq
Forward (+)
54497719 .. 54498940
1222 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG276600.1

Sequence Viewer

Length: 1152 bp
ATGGATGCTCAAGGATTTCTTTGTTCCGAGCGAGCCCCAAAGAAGCAAGGGAAAGATCTTGACTACGGTCCTGAGTACCGAAGGTCGTTACCTTTGAACTCGATCAGTCTCACGGCGTCCCTTGAGAGTAGGCCTACCTGGGTTACCACTGCCAAATTGAATTCTGGTCACCTTAGATTCGATCCTCATGCCGAAGACGGTGTTATAAAGAATGTTCGCTATTTCGGTGCTCATTTTGATGCCCACACGTTGATGAAGGCAAACAACGAAGAGGATGGTGACAACAAGTTCCCAGTTGGAGAAGATTTTTACCCAGCCCTTCATAGAATGCTGAAGTGTAAGAAAGACTGGGGTGAAGACTTCTGTTTTCGTGGTCGGGCCGTATTTGAGCATGGCATTCTAGAATGGACGGAAACCACCCTAACTGAATTTGAAGAGACTTTAGACGCAGCTGGTATCTTCGGTGCAGTTGCTGTTTCCCGTTATCCGTATGAGTATTGCAGTAATGTGTGGAGGGCATTCTGTGAGCTGTGGGGGCCTTTAACAAACACTTTTCACCATGCAGATGGGGAAATGAGCATCTCTTTGCATGATTTGAATGTTATTGGAGGATTGCCGGTTTCAGGAGAACCATACGAAGAATTCATTCCTCCAAATAAAGATCTGGTAAAGGTTGAATTATACCATTCTATGGTTGCAGAGCTCTTGAGGATTTATACCTATCTGTGCGCTGCTTATAAGAGCAGATATGTCTACTGGCCATGGTGGATCGAACATTTTTATCGTGGGGAGATAATTTACGGAGCCTATGGTGAATGTAAGAATTCTGGGGTTCCGAAACTGAGAGAACCAAAGCTTGAGTTGAAGATTTCAAAGCAAGGAAGACTGGCTGCATTCCTCGCGTTCTGGCTTAGCAGGGCATCAGGGTATCTCTTGCGCCCACAGTACTGGGTTATGTGTACCATGGTCTTGGTGAGATGGCTACTCACTCCGCTGGTCCTGGCTCTTCCAACTCTTGTTTGCCTATCCACTACGTCATTGGCTGGCTTGGAGAATATTTTCCTTATCTGTACTCATCACGTTCTGATAAAGAATTCCCAGGAGGGTATCCTCGTTTGGCCAGGTATGCAGGTGTTCAAGGCAGGAGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

383

Amino Acids

43.76

Weight (kDa)

6.24

Isoelectric Point (pI)

33.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 152 - 306 5.6e-11 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000253)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28912 FvH4_3g31370 FvH4_3g31371 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_6g28991 FvH4_7g16740 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610
malus_domestica MD10G1126100.v1.1 MD10G1312700.v1.1
rosa_chinensis RchiOBHm_Chr6g0276621
rosa_laevigata RLG00000023327 RLG00000023328
rosa_multiflora Rmu_co8195922.1_g000001 Rmu_co8303105.1_g000001 Rmu_co8385689.1_g000001 Rmu_sc0000385.1_g000010 Rmu_sc0000594.1_g000002 Rmu_sc0000857.1_g000010 Rmu_sc0001016.1_g000053 Rmu_sc0001468.1_g000028 Rmu_sc0001548.1_g000047 Rmu_sc0001548.1_g000048 Rmu_sc0002281.1_g000026 Rmu_sc0002281.1_g000027 Rmu_sc0002281.1_g000028 Rmu_sc0002478.1_g000001 Rmu_sc0002513.1_g000014 Rmu_sc0002662.1_g000017 Rmu_sc0003936.1_g000040 Rmu_sc0004084.1_g000047 Rmu_sc0005529.1_g000005 Rmu_sc0005529.1_g000006 Rmu_sc0005728.1_g000010 Rmu_sc0005747.1_g000017 Rmu_sc0005747.1_g000018 Rmu_sc0006385.1_g000001 Rmu_sc0006550.1_g000019 Rmu_sc0006803.1_g000033 Rmu_sc0007102.1_g000011 Rmu_sc0011018.1_g000001 Rmu_sc0011452.1_g000014 Rmu_sc0011805.1_g000001 Rmu_sc0011805.1_g000002 Rmu_sc0012566.1_g000001 Rmu_sc0013807.1_g000007 Rmu_sc0015817.1_g000001 Rmu_sc0015930.1_g000011 Rmu_sc0018873.1_g000003 Rmu_sc0020929.1_g000001
rosa_roxburghii Rroxscaffold_2G00081310 Rroxscaffold_2G00111790 Rroxscaffold_5G00349530 Rroxscaffold_5G00356270 Rroxscaffold_5G00356280 Rroxscaffold_5G00356290
rosa_rugosa Rorug01G0056400 Rorug01G0056500 Rorug02G0247000 Rorug03G0271700 Rorug04G0157900 Rorug05G0221700 Rorug05G0251400 Rorug05G0251400 Rorug06G0087300 Rorug07G0221900 Rorug07G0221900
rosa_samantha Rh1AG073200 Rh1AG073300 Rh1AG124600 Rh1AG124700 Rh1BG091900 Rh1CG031600 Rh1CG072100 Rh1CG072200 Rh1CG118800 Rh1CG276600 Rh1CG276700 Rh1DG077300 Rh2BG192000 Rh2BG330900 Rh2BG331000 Rh2BG517700 Rh2BG517800 Rh2CG188300 Rh2DG120800 Rh2DG323900 Rh2DG420700 Rh2DG433000 Rh2DG529400 Rh2DG529500 Rh3DG358100 Rh3DG358200 Rh4BG129700 Rh4BG129800 Rh4BG129900 Rh4BG166400 Rh4CG032000 Rh4DG024800 Rh4DG039500 Rh5AG223400 Rh5BG244500 Rh5BG244600 Rh5BG244700 Rh5CG363000 Rh5CG366900 Rh6AG117500 Rh6AG188600 Rh6AG188700 Rh6AG188800 Rh6BG111400 Rh6BG140800 Rh6BG178800 Rh6DG124100 Rh6DG210000 Rh7AG441200 Rh7BG296800 Rh7BG413900 Rh7BG414000 Rh7BG452400 Rh7DG234000 Rh7DG234100
rosa_wichuraiana Rw2G019410 Rw5G042140 Rw7G019590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 206, 738
AarI CACCTGC 1 cut(s) 1120
Acc36I ACCTGC 1 cut(s) 1120
AccB7I CCANNNNNTGG 1 cut(s) 691
AccI GTMKAC 1 cut(s) 753
AccII CGCG 1 cut(s) 902
AciI CCGC 1 cut(s) 992
AclWI GGATC 2 cut(s) 176, 776
AcoI YGGCCR 2 cut(s) 758, 1118
AcsI RAATTY 5 cut(s) 160, 428, 641, 823, 1093
AcuI CTGAAG 1 cut(s) 353
AcyI GRCGYC 1 cut(s) 116
AfaI GTAC 4 cut(s) 77, 947, 961, 1072
AfiI CCNNNNNNNGG 2 cut(s) 623, 691
AflIII ACRYGT 1 cut(s) 246
AgsI TTSAA 8 cut(s) 97, 160, 434, 598, 677, 865, 873, 1138
AjnI CCWGG 4 cut(s) 137, 999, 1098, 1120
AluBI AGCT 4 cut(s) 452, 529, 703, 856
AluI AGCT 4 cut(s) 452, 529, 703, 856
Alw21I GWGCWC 2 cut(s) 232, 705
Alw26I GTCTC 2 cut(s) 113, 431
AlwI GGATC 2 cut(s) 176, 776
AlwNI CAGNNNCTG 1 cut(s) 473
AoxI GGCC 5 cut(s) 131, 378, 536, 758, 1118
ApeKI GCWGC 3 cut(s) 449, 731, 890
ApoI RAATTY 5 cut(s) 160, 428, 641, 823, 1093
Asp700I GAANNNNTTC 2 cut(s) 645, 1058
AspLEI GCGC 2 cut(s) 731, 939
AspS9I GGNCC 4 cut(s) 68, 378, 536, 997
AsuHPI GGTGA 6 cut(s) 161, 290, 365, 548, 824, 985
AvaII GGWCC 2 cut(s) 68, 997
BalI TGGCCA 2 cut(s) 760, 1120
BanII GRGCYC 2 cut(s) 37, 705
BbsI GAAGAC 3 cut(s) 201, 363, 889
Bbv12I GWGCWC 2 cut(s) 232, 705
BbvI GCAGC 3 cut(s) 461, 718, 877
BccI CCATC 3 cut(s) 269, 560, 972
BceAI ACGGC 2 cut(s) 129, 365
BcgI CGANNNNNNTGC 2 cut(s) 170, 204
BciT130I CCWGG 4 cut(s) 139, 1001, 1100, 1122
BciVI GTATCC 1 cut(s) 1118
BcoDI GTCTC 2 cut(s) 113, 431
BfaI CTAG 1 cut(s) 401
BfuAI ACCTGC 1 cut(s) 1120
BfuI GTATCC 1 cut(s) 1118
BglII AGATCT 2 cut(s) 55, 661
BisI GCNGC 3 cut(s) 450, 732, 891
BlpI GCTNAGC 1 cut(s) 911
BlsI GCNGC 3 cut(s) 451, 733, 892
BmcAI AGTACT 1 cut(s) 947
Bme1390I CCNGG 4 cut(s) 139, 1001, 1100, 1122
Bme18I GGWCC 2 cut(s) 68, 997
BmgT120I GGNCC 4 cut(s) 68, 378, 536, 997
BmiI GGNNCC 3 cut(s) 537, 805, 834
BmrFI CCNGG 4 cut(s) 139, 1001, 1100, 1122
BmrI ACTGGG 3 cut(s) 287, 358, 958
BmsI GCATC 3 cut(s) 229, 588, 929
BmuI ACTGGG 3 cut(s) 287, 358, 958
BoxI GACNNNNGTC 1 cut(s) 66
BpiI GAAGAC 3 cut(s) 201, 363, 889
Bpu1102I GCTNAGC 1 cut(s) 911
BpuEI CTTGAG 3 cut(s) 143, 727, 878
BsaHI GRCGYC 1 cut(s) 116
BsaJI CCNNGG 4 cut(s) 138, 761, 963, 1098
Bsc4I CCNNNNNNNGG 2 cut(s) 623, 691
Bse118I RCCGGY 1 cut(s) 616
Bse1I ACTGG 5 cut(s) 293, 353, 761, 891, 953
BseBI CCWGG 4 cut(s) 139, 1001, 1100, 1122
BseDI CCNNGG 4 cut(s) 138, 761, 963, 1098
BseGI GGATG 2 cut(s) 10, 280
BseLI CCNNNNNNNGG 2 cut(s) 623, 691
BseMII CTCAG 2 cut(s) 63, 833
BseNI ACTGG 5 cut(s) 293, 353, 761, 891, 953
BseXI GCAGC 3 cut(s) 461, 718, 877
BseYI CCCAGC 1 cut(s) 313
BsgI GTGCAG 1 cut(s) 486
Bsh1236I CGCG 1 cut(s) 902
BshFI GGCC 5 cut(s) 133, 380, 538, 760, 1120
BsiHKAI GWGCWC 2 cut(s) 232, 705
BsiSI CCGG 1 cut(s) 617
BslFI GGGAC 1 cut(s) 103
BslI CCNNNNNNNGG 2 cut(s) 623, 691
BsmAI GTCTC 2 cut(s) 113, 431
BsmFI GGGAC 1 cut(s) 103
BsmI GAATGC 4 cut(s) 333, 396, 518, 893
BsnI GGCC 5 cut(s) 133, 380, 538, 760, 1120
Bsp1286I GDGCHC 3 cut(s) 37, 232, 705
Bsp143I GATC 5 cut(s) 55, 102, 181, 661, 768
Bsp1720I GCTNAGC 1 cut(s) 911
Bsp19I CCATGG 2 cut(s) 761, 963
BspACI CCGC 1 cut(s) 992
BspANI GGCC 5 cut(s) 133, 380, 538, 760, 1120
BspCNI CTCAG 2 cut(s) 64, 834
BspFNI CGCG 1 cut(s) 902
BspLI GGNNCC 3 cut(s) 537, 805, 834
BspMI ACCTGC 1 cut(s) 1120
BspPI GGATC 2 cut(s) 176, 776
BspQI GCTCTTC 1 cut(s) 1011
BsrFI RCCGGY 1 cut(s) 616
BsrI ACTGG 5 cut(s) 293, 353, 761, 891, 953
BssAI RCCGGY 1 cut(s) 616
BssECI CCNNGG 4 cut(s) 138, 761, 963, 1098
BssMI GATC 5 cut(s) 55, 102, 181, 661, 768
BssNI GRCGYC 1 cut(s) 116
BssT1I CCWWGG 2 cut(s) 761, 963
Bst2UI CCWGG 4 cut(s) 139, 1001, 1100, 1122
Bst4CI ACNGT 3 cut(s) 68, 200, 945
Bst6I CTCTTC 3 cut(s) 264, 429, 1011
BstACI GRCGYC 1 cut(s) 116
BstC8I GCNNGC 2 cut(s) 33, 1045
BstDEI CTNAG 4 cut(s) 72, 173, 842, 911
BstDSI CCRYGG 2 cut(s) 761, 963
BstEII GGTNACC 2 cut(s) 142, 167
BstF5I GGATG 2 cut(s) 10, 280
BstFNI CGCG 1 cut(s) 902
BstHHI GCGC 2 cut(s) 731, 939
BstKTI GATC 5 cut(s) 58, 105, 184, 664, 771
BstMAI GTCTC 2 cut(s) 113, 431
BstMBI GATC 5 cut(s) 55, 102, 181, 661, 768
BstMWI GCNNNNNNNGC 3 cut(s) 535, 899, 1126
BstNI CCWGG 4 cut(s) 139, 1001, 1100, 1122
BstPAI GACNNNNGTC 1 cut(s) 66
BstPI GGTNACC 2 cut(s) 142, 167
BstSCI CCNGG 4 cut(s) 137, 999, 1098, 1120
BstUI CGCG 1 cut(s) 902
BstV1I GCAGC 3 cut(s) 461, 718, 877
BstV2I GAAGAC 3 cut(s) 201, 363, 889
BstX2I RGATCY 2 cut(s) 55, 661
BstXI CCANNNNNNTGG 3 cut(s) 566, 948, 970
BstYI RGATCY 2 cut(s) 55, 661
BsuI GTATCC 1 cut(s) 1118
BsuRI GGCC 5 cut(s) 133, 380, 538, 760, 1120
BtgI CCRYGG 2 cut(s) 761, 963
BtsCI GGATG 2 cut(s) 10, 280
BtsI GCAGTG 1 cut(s) 147
BtsIMutI CAGTG 1 cut(s) 147
BveI ACCTGC 1 cut(s) 1120
Cac8I GCNNGC 2 cut(s) 33, 1045
CaiI CAGNNNCTG 1 cut(s) 473
CfoI GCGC 2 cut(s) 731, 939
Cfr10I RCCGGY 1 cut(s) 616
Cfr13I GGNCC 4 cut(s) 68, 378, 536, 997
CseI GACGC 2 cut(s) 105, 455
Csp6I GTAC 4 cut(s) 76, 946, 960, 1071
CviAII CATG 6 cut(s) 188, 392, 560, 590, 762, 964
CviQI GTAC 4 cut(s) 76, 946, 960, 1071
DdeI CTNAG 4 cut(s) 72, 173, 842, 911
DpnI GATC 5 cut(s) 57, 104, 183, 663, 770
DpnII GATC 5 cut(s) 55, 102, 181, 661, 768
EaeI YGGCCR 2 cut(s) 758, 1118
Eam1104I CTCTTC 3 cut(s) 264, 429, 1011
EarI CTCTTC 3 cut(s) 264, 429, 1011
Ecl136II GAGCTC 1 cut(s) 703
Eco130I CCWWGG 2 cut(s) 761, 963
Eco147I AGGCCT 1 cut(s) 133
Eco24I GRGCYC 2 cut(s) 37, 705
Eco47I GGWCC 2 cut(s) 68, 997
Eco53kI GAGCTC 1 cut(s) 703
Eco57I CTGAAG 1 cut(s) 353
Eco91I GGTNACC 2 cut(s) 142, 167
EcoICRI GAGCTC 1 cut(s) 703
EcoO109I RGGNCCY 1 cut(s) 536
EcoO65I GGTNACC 2 cut(s) 142, 167
EcoRI GAATTC 4 cut(s) 160, 641, 823, 1093
EcoRII CCWGG 4 cut(s) 137, 999, 1098, 1120
EcoT14I CCWWGG 2 cut(s) 761, 963
EcoT38I GRGCYC 2 cut(s) 37, 705
ErhI CCWWGG 2 cut(s) 761, 963
FaeI CATG 6 cut(s) 191, 395, 563, 593, 765, 967
FalI AAGNNNNNCTT 1 cut(s) 35
FaqI GGGAC 1 cut(s) 103
FatI CATG 6 cut(s) 187, 391, 559, 589, 761, 963
FblI GTMKAC 1 cut(s) 753
Fnu4HI GCNGC 3 cut(s) 450, 732, 891
FokI GGATG 2 cut(s) 17, 287
FriOI GRGCYC 2 cut(s) 37, 705
Fsp4HI GCNGC 3 cut(s) 450, 732, 891
FspBI CTAG 1 cut(s) 401
GlaI GCGC 2 cut(s) 730, 938
GluI GCNGC 3 cut(s) 450, 732, 891
GsaI CCCAGC 1 cut(s) 317
HaeIII GGCC 5 cut(s) 133, 380, 538, 760, 1120
HapII CCGG 1 cut(s) 617
HgaI GACGC 2 cut(s) 105, 455
HhaI GCGC 2 cut(s) 731, 939
Hin1I GRCGYC 1 cut(s) 116
Hin1II CATG 6 cut(s) 191, 395, 563, 593, 765, 967
Hin6I GCGC 2 cut(s) 729, 937
HinP1I GCGC 2 cut(s) 729, 937
HindIII AAGCTT 1 cut(s) 854
HinfI GANTC 1 cut(s) 177
HpaII CCGG 1 cut(s) 617
HphI GGTGA 6 cut(s) 161, 290, 365, 548, 824, 985
Hpy166II GTNNAC 2 cut(s) 754, 960
Hpy188I TCNGA 3 cut(s) 28, 837, 1086
Hpy188III TCNNGA 5 cut(s) 59, 71, 401, 624, 706
Hpy8I GTNNAC 2 cut(s) 754, 960
HpyAV CCTTC 3 cut(s) 75, 250, 329
HpyCH4III ACNGT 3 cut(s) 68, 200, 945
HpyCH4IV ACGT 3 cut(s) 248, 1034, 1080
HpyCH4V TGCA 7 cut(s) 467, 501, 563, 589, 698, 893, 1129
HpyF10VI GCNNNNNNNGC 3 cut(s) 535, 899, 1126
HpyF3I CTNAG 4 cut(s) 72, 173, 842, 911
HpySE526I ACGT 3 cut(s) 248, 1034, 1080
Hsp92I GRCGYC 1 cut(s) 116
Hsp92II CATG 6 cut(s) 191, 395, 563, 593, 765, 967
HspAI GCGC 2 cut(s) 729, 937
Kzo9I GATC 5 cut(s) 55, 102, 181, 661, 768
LguI GCTCTTC 1 cut(s) 1011
LmnI GCTCC 1 cut(s) 803
Lsp1109I GCAGC 3 cut(s) 461, 718, 877
LweI GCATC 3 cut(s) 229, 588, 929
MaeI CTAG 1 cut(s) 401
MaeII ACGT 3 cut(s) 248, 1034, 1080
MaeIII GTNAC 4 cut(s) 87, 142, 167, 278
MalI GATC 5 cut(s) 57, 104, 183, 663, 770
MboI GATC 5 cut(s) 55, 102, 181, 661, 768
MflI RGATCY 2 cut(s) 55, 661
MhlI GDGCHC 3 cut(s) 37, 232, 705
MlsI TGGCCA 2 cut(s) 760, 1120
MluCI AATT 8 cut(s) 155, 160, 428, 641, 677, 795, 823, 1093
MluNI TGGCCA 2 cut(s) 760, 1120
MmeI TCCRAC 2 cut(s) 277, 1034
MnlI CCTC 9 cut(s) 195, 265, 507, 602, 660, 702, 908, 1096, 1121
Mox20I TGGCCA 2 cut(s) 760, 1120
MroXI GAANNNNTTC 2 cut(s) 645, 1058
MscI TGGCCA 2 cut(s) 760, 1120
MseI TTAA 2 cut(s) 542, 1150
MslI CAYNNNNRTG 3 cut(s) 237, 251, 564
Msp20I TGGCCA 2 cut(s) 760, 1120
MspA1I CMGCKG 2 cut(s) 452, 994
MspI CCGG 1 cut(s) 617
MspR9I CCNGG 4 cut(s) 139, 1001, 1100, 1122
Mva1269I GAATGC 4 cut(s) 333, 396, 518, 893
MvaI CCWGG 4 cut(s) 139, 1001, 1100, 1122
MvnI CGCG 1 cut(s) 902
MwoI GCNNNNNNNGC 3 cut(s) 535, 899, 1126
NcoI CCATGG 2 cut(s) 761, 963
NdeII GATC 5 cut(s) 55, 102, 181, 661, 768
NlaIII CATG 6 cut(s) 191, 395, 563, 593, 765, 967
NlaIV GGNNCC 3 cut(s) 537, 805, 834
NmuCI GTSAC 2 cut(s) 167, 278
PaqCI CACCTGC 1 cut(s) 1120
PceI AGGCCT 1 cut(s) 133
PciSI GCTCTTC 1 cut(s) 1011
PctI GAATGC 4 cut(s) 333, 396, 518, 893
PdmI GAANNNNTTC 2 cut(s) 645, 1058
PfeI GAWTC 1 cut(s) 177
PflMI CCANNNNNTGG 1 cut(s) 691
PkrI GCNGC 3 cut(s) 451, 733, 892
PshAI GACNNNNGTC 1 cut(s) 66
PsiI TTATAA 2 cut(s) 206, 738
Psp124BI GAGCTC 1 cut(s) 705
Psp6I CCWGG 4 cut(s) 137, 999, 1098, 1120
PspEI GGTNACC 2 cut(s) 142, 167
PspFI CCCAGC 1 cut(s) 313
PspGI CCWGG 4 cut(s) 137, 999, 1098, 1120
PspN4I GGNNCC 3 cut(s) 537, 805, 834
PspPI GGNCC 4 cut(s) 68, 378, 536, 997
PstNI CAGNNNCTG 1 cut(s) 473
PsuI RGATCY 2 cut(s) 55, 661
PvuII CAGCTG 1 cut(s) 452
RsaI GTAC 4 cut(s) 77, 947, 961, 1072
RsaNI GTAC 4 cut(s) 76, 946, 960, 1071
RseI CAYNNNNRTG 3 cut(s) 237, 251, 564
SacI GAGCTC 1 cut(s) 705
SapI GCTCTTC 1 cut(s) 1011
SaqAI TTAA 2 cut(s) 542, 1150
SatI GCNGC 3 cut(s) 450, 732, 891
Sau3AI GATC 5 cut(s) 55, 102, 181, 661, 768
Sau96I GGNCC 4 cut(s) 68, 378, 536, 997
ScaI AGTACT 1 cut(s) 947
ScrFI CCNGG 4 cut(s) 139, 1001, 1100, 1122
SduI GDGCHC 3 cut(s) 37, 232, 705
SfaNI GCATC 3 cut(s) 229, 588, 929
SinI GGWCC 2 cut(s) 68, 997
SmiMI CAYNNNNRTG 3 cut(s) 237, 251, 564
SmlI CTYRAG 4 cut(s) 9, 122, 706, 857
SmoI CTYRAG 4 cut(s) 9, 122, 706, 857
Sse9I AATT 8 cut(s) 155, 160, 428, 641, 677, 795, 823, 1093
SseBI AGGCCT 1 cut(s) 133
SsiI CCGC 1 cut(s) 992
SspI AATATT 1 cut(s) 1057
SspMI CTAG 1 cut(s) 401
SstI GAGCTC 1 cut(s) 705
StuI AGGCCT 1 cut(s) 133
StyD4I CCNGG 4 cut(s) 137, 999, 1098, 1120
StyI CCWWGG 2 cut(s) 761, 963
TaaI ACNGT 3 cut(s) 68, 200, 945
TaiI ACGT 3 cut(s) 251, 1037, 1083
TaqI TCGA 3 cut(s) 101, 180, 771
TasI AATT 8 cut(s) 155, 160, 428, 641, 677, 795, 823, 1093
TatI WGTACW 2 cut(s) 945, 1070
TfiI GAWTC 1 cut(s) 177
Tru1I TTAA 2 cut(s) 542, 1150
Tru9I TTAA 2 cut(s) 542, 1150
TscAI CASTG 1 cut(s) 154
TseFI GTSAC 2 cut(s) 167, 278
TseI GCWGC 3 cut(s) 449, 731, 890
Tsp45I GTSAC 2 cut(s) 167, 278
TspDTI ATGAA 3 cut(s) 269, 311, 634
TspGWI ACGGA 3 cut(s) 425, 477, 816
TspRI CASTG 1 cut(s) 154
Van91I CCANNNNNTGG 1 cut(s) 691
VpaK11BI GGWCC 2 cut(s) 68, 997
XapI RAATTY 5 cut(s) 160, 428, 641, 823, 1093
XbaI TCTAGA 1 cut(s) 400
XcmI CCANNNNNNNNNTGG 1 cut(s) 1036
XmiI GTMKAC 1 cut(s) 753
XmnI GAANNNNTTC 2 cut(s) 645, 1058
XspI CTAG 1 cut(s) 401
ZrmI AGTACT 1 cut(s) 947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.