Plant mobile domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 1 - 356 | 7.3e-31 | Plant mobile domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1029 |
| AarI | CACCTGC | 1 cut(s) | 629 |
| Acc36I | ACCTGC | 1 cut(s) | 629 |
| AccI | GTMKAC | 3 cut(s) | 116, 225, 1487 |
| AciI | CCGC | 4 cut(s) | 231, 609, 1529, 1683 |
| AclWI | GGATC | 4 cut(s) | 491, 1042, 1089, 1894 |
| AcoI | YGGCCR | 1 cut(s) | 627 |
| AcsI | RAATTY | 4 cut(s) | 68, 1510, 2364, 2393 |
| AcuI | CTGAAG | 2 cut(s) | 1376, 2343 |
| AcyI | GRCGYC | 1 cut(s) | 586 |
| AfaI | GTAC | 1 cut(s) | 1902 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 50, 625, 1088, 1248, 1415 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1483 |
| AjiI | CACGTC | 1 cut(s) | 614 |
| AjnI | CCWGG | 5 cut(s) | 182, 423, 629, 891, 1295 |
| Alw21I | GWGCWC | 3 cut(s) | 1525, 2054, 2476 |
| Alw26I | GTCTC | 5 cut(s) | 236, 522, 1186, 1393, 1535 |
| AlwI | GGATC | 4 cut(s) | 491, 1042, 1089, 1894 |
| Ama87I | CYCGRG | 1 cut(s) | 519 |
| AoxI | GGCC | 4 cut(s) | 420, 475, 506, 627 |
| ApeKI | GCWGC | 6 cut(s) | 329, 525, 593, 1634, 2273, 2350 |
| ApoI | RAATTY | 4 cut(s) | 68, 1510, 2364, 2393 |
| AseI | ATTAAT | 1 cut(s) | 2451 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 72, 142 |
| AspLEI | GCGC | 2 cut(s) | 158, 1079 |
| AspS9I | GGNCC | 2 cut(s) | 421, 506 |
| AsuHPI | GGTGA | 4 cut(s) | 251, 494, 608, 1901 |
| AvaI | CYCGRG | 1 cut(s) | 519 |
| BaeGI | GKGCMC | 1 cut(s) | 1003 |
| BalI | TGGCCA | 1 cut(s) | 629 |
| BbsI | GAAGAC | 4 cut(s) | 32, 943, 1275, 2141 |
| Bbv12I | GWGCWC | 3 cut(s) | 1525, 2054, 2476 |
| BbvI | GCAGC | 6 cut(s) | 316, 512, 580, 1646, 2260, 2337 |
| BccI | CCATC | 5 cut(s) | 457, 820, 910, 1053, 1948 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1215, 1249 |
| BciT130I | CCWGG | 5 cut(s) | 184, 425, 631, 893, 1297 |
| BcoDI | GTCTC | 5 cut(s) | 236, 522, 1186, 1393, 1535 |
| BfaI | CTAG | 7 cut(s) | 338, 381, 675, 959, 1701, 1971, 2339 |
| BfmI | CTRYAG | 1 cut(s) | 1263 |
| BfuAI | ACCTGC | 1 cut(s) | 629 |
| BglII | AGATCT | 2 cut(s) | 955, 1800 |
| BisI | GCNGC | 7 cut(s) | 231, 330, 526, 594, 1635, 2274, 2351 |
| BlpI | GCTNAGC | 1 cut(s) | 350 |
| BlsI | GCNGC | 7 cut(s) | 232, 331, 527, 595, 1636, 2275, 2352 |
| BmcAI | AGTACT | 1 cut(s) | 1902 |
| Bme1390I | CCNGG | 5 cut(s) | 184, 425, 631, 893, 1297 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1483 |
| BmeT110I | CYCGRG | 1 cut(s) | 519 |
| BmgBI | CACGTC | 1 cut(s) | 614 |
| BmgT120I | GGNCC | 2 cut(s) | 421, 506 |
| BmiI | GGNNCC | 2 cut(s) | 849, 1563 |
| BmrFI | CCNGG | 5 cut(s) | 184, 425, 631, 893, 1297 |
| BmsI | GCATC | 4 cut(s) | 1834, 1842, 2036, 2068 |
| BpiI | GAAGAC | 4 cut(s) | 32, 943, 1275, 2141 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1390, 1422 |
| BpmI | CTGGAG | 3 cut(s) | 205, 1392, 1623 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 350 |
| BpuEI | CTTGAG | 3 cut(s) | 1310, 1458, 1985 |
| BsaAI | YACGTR | 1 cut(s) | 544 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2082 |
| BsaHI | GRCGYC | 1 cut(s) | 586 |
| BsaJI | CCNNGG | 4 cut(s) | 423, 424, 478, 892 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 50, 625, 1088, 1248, 1415 |
| Bse118I | RCCGGY | 1 cut(s) | 354 |
| Bse1I | ACTGG | 2 cut(s) | 996, 1783 |
| Bse3DI | GCAATG | 2 cut(s) | 197, 2241 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2082 |
| BseBI | CCWGG | 5 cut(s) | 184, 425, 631, 893, 1297 |
| BseDI | CCNNGG | 4 cut(s) | 423, 424, 478, 892 |
| BseGI | GGATG | 6 cut(s) | 831, 1011, 1053, 1071, 1490, 1739 |
| BseJI | GATNNNNATC | 1 cut(s) | 2082 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 50, 625, 1088, 1248, 1415 |
| BseMI | GCAATG | 2 cut(s) | 197, 2241 |
| BseMII | CTCAG | 5 cut(s) | 364, 642, 1812, 1865, 2438 |
| BseNI | ACTGG | 2 cut(s) | 996, 1783 |
| BseSI | GKGCMC | 1 cut(s) | 1003 |
| BseXI | GCAGC | 6 cut(s) | 316, 512, 580, 1646, 2260, 2337 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1529 |
| BshFI | GGCC | 4 cut(s) | 422, 477, 508, 629 |
| BsiEI | CGRYCG | 1 cut(s) | 1529 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1525, 2054, 2476 |
| BsiHKCI | CYCGRG | 1 cut(s) | 519 |
| BsiSI | CCGG | 1 cut(s) | 355 |
| BslFI | GGGAC | 1 cut(s) | 41 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 50, 625, 1088, 1248, 1415 |
| BsmAI | GTCTC | 5 cut(s) | 236, 522, 1186, 1393, 1535 |
| BsmFI | GGGAC | 1 cut(s) | 41 |
| BsnI | GGCC | 4 cut(s) | 422, 477, 508, 629 |
| BsoBI | CYCGRG | 1 cut(s) | 519 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1003, 1525, 2054, 2476 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 350 |
| BspACI | CCGC | 4 cut(s) | 231, 609, 1529, 1683 |
| BspANI | GGCC | 4 cut(s) | 422, 477, 508, 629 |
| BspCNI | CTCAG | 5 cut(s) | 363, 643, 1813, 1866, 2437 |
| BspHI | TCATGA | 1 cut(s) | 2227 |
| BspLI | GGNNCC | 2 cut(s) | 849, 1563 |
| BspMI | ACCTGC | 1 cut(s) | 629 |
| BspPI | GGATC | 4 cut(s) | 491, 1042, 1089, 1894 |
| BspQI | GCTCTTC | 2 cut(s) | 2319, 2340 |
| BsrDI | GCAATG | 2 cut(s) | 197, 2241 |
| BsrFI | RCCGGY | 1 cut(s) | 354 |
| BsrI | ACTGG | 2 cut(s) | 996, 1783 |
| BssAI | RCCGGY | 1 cut(s) | 354 |
| BssECI | CCNNGG | 4 cut(s) | 423, 424, 478, 892 |
| BssNAI | GTATAC | 2 cut(s) | 117, 226 |
| BssNI | GRCGYC | 1 cut(s) | 586 |
| BssT1I | CCWWGG | 1 cut(s) | 478 |
| Bst1107I | GTATAC | 2 cut(s) | 117, 226 |
| Bst2UI | CCWGG | 5 cut(s) | 184, 425, 631, 893, 1297 |
| Bst4CI | ACNGT | 9 cut(s) | 879, 942, 1190, 1447, 1546, 1650, 1913, 2005, 2154 |
| Bst6I | CTCTTC | 8 cut(s) | 1192, 1277, 1391, 2109, 2192, 2286, 2319, 2340 |
| BstACI | GRCGYC | 1 cut(s) | 586 |
| BstBAI | YACGTR | 1 cut(s) | 544 |
| BstC8I | GCNNGC | 5 cut(s) | 198, 412, 1075, 1332, 2223 |
| BstF5I | GGATG | 6 cut(s) | 831, 1011, 1053, 1071, 1490, 1739 |
| BstHHI | GCGC | 2 cut(s) | 158, 1079 |
| BstMAI | GTCTC | 5 cut(s) | 236, 522, 1186, 1393, 1535 |
| BstMCI | CGRYCG | 1 cut(s) | 1529 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 338, 635, 680, 1379, 2231 |
| BstNI | CCWGG | 5 cut(s) | 184, 425, 631, 893, 1297 |
| BstNSI | RCATGY | 2 cut(s) | 1077, 2405 |
| BstSCI | CCNGG | 5 cut(s) | 182, 423, 629, 891, 1295 |
| BstSFI | CTRYAG | 1 cut(s) | 1263 |
| BstSLI | GKGCMC | 1 cut(s) | 1003 |
| BstV1I | GCAGC | 6 cut(s) | 316, 512, 580, 1646, 2260, 2337 |
| BstV2I | GAAGAC | 4 cut(s) | 32, 943, 1275, 2141 |
| BstX2I | RGATCY | 4 cut(s) | 955, 1034, 1800, 1886 |
| BstYI | RGATCY | 4 cut(s) | 955, 1034, 1800, 1886 |
| BstZ17I | GTATAC | 2 cut(s) | 117, 226 |
| BsuRI | GGCC | 4 cut(s) | 422, 477, 508, 629 |
| BtrI | CACGTC | 1 cut(s) | 614 |
| BtsCI | GGATG | 6 cut(s) | 831, 1011, 1053, 1071, 1490, 1739 |
| BtsIMutI | CAGTG | 4 cut(s) | 947, 1003, 1443, 1551 |
| BveI | ACCTGC | 1 cut(s) | 629 |
| Cac8I | GCNNGC | 5 cut(s) | 198, 412, 1075, 1332, 2223 |
| CciI | TCATGA | 1 cut(s) | 2227 |
| CfoI | GCGC | 2 cut(s) | 158, 1079 |
| Cfr10I | RCCGGY | 1 cut(s) | 354 |
| Cfr13I | GGNCC | 2 cut(s) | 421, 506 |
| CseI | GACGC | 3 cut(s) | 594, 656, 2342 |
| Csp6I | GTAC | 1 cut(s) | 1901 |
| CviAII | CATG | 5 cut(s) | 473, 1074, 2228, 2375, 2402 |
| CviQI | GTAC | 1 cut(s) | 1901 |
| DraI | TTTAAA | 1 cut(s) | 2419 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1483 |
| EaeI | YGGCCR | 1 cut(s) | 627 |
| Eam1104I | CTCTTC | 8 cut(s) | 1192, 1277, 1391, 2109, 2192, 2286, 2319, 2340 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1483 |
| EarI | CTCTTC | 8 cut(s) | 1192, 1277, 1391, 2109, 2192, 2286, 2319, 2340 |
| Eco130I | CCWWGG | 1 cut(s) | 478 |
| Eco32I | GATATC | 1 cut(s) | 110 |
| Eco57I | CTGAAG | 2 cut(s) | 1376, 2343 |
| Eco88I | CYCGRG | 1 cut(s) | 519 |
| EcoO109I | RGGNCCY | 1 cut(s) | 506 |
| EcoRI | GAATTC | 2 cut(s) | 68, 2364 |
| EcoRII | CCWGG | 5 cut(s) | 182, 423, 629, 891, 1295 |
| EcoRV | GATATC | 1 cut(s) | 110 |
| EcoT14I | CCWWGG | 1 cut(s) | 478 |
| ErhI | CCWWGG | 1 cut(s) | 478 |
| FaeI | CATG | 5 cut(s) | 476, 1077, 2231, 2378, 2405 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 309, 341, 1887, 1919, 2248, 2280, 2370, 2402 |
| FaqI | GGGAC | 1 cut(s) | 41 |
| FatI | CATG | 5 cut(s) | 472, 1073, 2227, 2374, 2401 |
| FauI | CCCGC | 1 cut(s) | 616 |
| FauNDI | CATATG | 1 cut(s) | 61 |
| FblI | GTMKAC | 3 cut(s) | 116, 225, 1487 |
| Fnu4HI | GCNGC | 7 cut(s) | 231, 330, 526, 594, 1635, 2274, 2351 |
| FokI | GGATG | 6 cut(s) | 838, 998, 1060, 1078, 1477, 1726 |
| Fsp4HI | GCNGC | 7 cut(s) | 231, 330, 526, 594, 1635, 2274, 2351 |
| FspBI | CTAG | 7 cut(s) | 338, 381, 675, 959, 1701, 1971, 2339 |
| GlaI | GCGC | 2 cut(s) | 157, 1078 |
| GluI | GCNGC | 7 cut(s) | 231, 330, 526, 594, 1635, 2274, 2351 |
| GsuI | CTGGAG | 3 cut(s) | 205, 1392, 1623 |
| HaeIII | GGCC | 4 cut(s) | 422, 477, 508, 629 |
| HapII | CCGG | 1 cut(s) | 355 |
| HgaI | GACGC | 3 cut(s) | 594, 656, 2342 |
| HhaI | GCGC | 2 cut(s) | 158, 1079 |
| Hin1I | GRCGYC | 1 cut(s) | 586 |
| Hin1II | CATG | 5 cut(s) | 476, 1077, 2231, 2378, 2405 |
| Hin6I | GCGC | 2 cut(s) | 156, 1077 |
| HinP1I | GCGC | 2 cut(s) | 156, 1077 |
| HincII | GTYRAC | 2 cut(s) | 646, 1488 |
| HindII | GTYRAC | 2 cut(s) | 646, 1488 |
| HindIII | AAGCTT | 2 cut(s) | 26, 763 |
| HpaII | CCGG | 1 cut(s) | 355 |
| HphI | GGTGA | 4 cut(s) | 251, 494, 608, 1901 |
| Hpy166II | GTNNAC | 5 cut(s) | 117, 226, 646, 1488, 1909 |
| Hpy8I | GTNNAC | 5 cut(s) | 117, 226, 646, 1488, 1909 |
| Hpy99I | CGWCG | 1 cut(s) | 2109 |
| HpyAV | CCTTC | 4 cut(s) | 311, 378, 539, 1552 |
| HpyCH4III | ACNGT | 9 cut(s) | 879, 942, 1190, 1447, 1546, 1650, 1913, 2005, 2154 |
| HpyCH4IV | ACGT | 3 cut(s) | 543, 613, 1018 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 338, 635, 680, 1379, 2231 |
| HpySE526I | ACGT | 3 cut(s) | 543, 613, 1018 |
| Hsp92I | GRCGYC | 1 cut(s) | 586 |
| Hsp92II | CATG | 5 cut(s) | 476, 1077, 2231, 2378, 2405 |
| HspAI | GCGC | 2 cut(s) | 156, 1077 |
| LguI | GCTCTTC | 2 cut(s) | 2319, 2340 |
| LmnI | GCTCC | 3 cut(s) | 1084, 1520, 1642 |
| Lsp1109I | GCAGC | 6 cut(s) | 316, 512, 580, 1646, 2260, 2337 |
| LweI | GCATC | 4 cut(s) | 1834, 1842, 2036, 2068 |
| MaeI | CTAG | 7 cut(s) | 338, 381, 675, 959, 1701, 1971, 2339 |
| MaeII | ACGT | 3 cut(s) | 543, 613, 1018 |
| MaeIII | GTNAC | 5 cut(s) | 490, 599, 614, 740, 1352 |
| MfeI | CAATTG | 1 cut(s) | 1932 |
| MflI | RGATCY | 4 cut(s) | 955, 1034, 1800, 1886 |
| MhlI | GDGCHC | 4 cut(s) | 1003, 1525, 2054, 2476 |
| MlsI | TGGCCA | 1 cut(s) | 629 |
| MluNI | TGGCCA | 1 cut(s) | 629 |
| MlyI | GAGTC | 6 cut(s) | 524, 672, 1111, 1514, 1976, 2131 |
| MmeI | TCCRAC | 1 cut(s) | 1716 |
| Mox20I | TGGCCA | 1 cut(s) | 629 |
| MroXI | GAANNNNTTC | 2 cut(s) | 72, 142 |
| MscI | TGGCCA | 1 cut(s) | 629 |
| MslI | CAYNNNNRTG | 3 cut(s) | 99, 1046, 1341 |
| Msp20I | TGGCCA | 1 cut(s) | 629 |
| MspI | CCGG | 1 cut(s) | 355 |
| MspR9I | CCNGG | 5 cut(s) | 184, 425, 631, 893, 1297 |
| MunI | CAATTG | 1 cut(s) | 1932 |
| MvaI | CCWGG | 5 cut(s) | 184, 425, 631, 893, 1297 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 338, 635, 680, 1379, 2231 |
| NdeI | CATATG | 1 cut(s) | 61 |
| NlaIII | CATG | 5 cut(s) | 476, 1077, 2231, 2378, 2405 |
| NlaIV | GGNNCC | 2 cut(s) | 849, 1563 |
| NmeAIII | GCCGAG | 1 cut(s) | 614 |
| NmuCI | GTSAC | 4 cut(s) | 490, 599, 614, 1352 |
| NspI | RCATGY | 2 cut(s) | 1077, 2405 |
| PacI | TTAATTAA | 1 cut(s) | 2451 |
| PaeI | GCATGC | 1 cut(s) | 1077 |
| PaeR7I | CTCGAG | 1 cut(s) | 519 |
| PagI | TCATGA | 1 cut(s) | 2227 |
| PaqCI | CACCTGC | 1 cut(s) | 629 |
| PasI | CCCWGGG | 1 cut(s) | 424 |
| PciSI | GCTCTTC | 2 cut(s) | 2319, 2340 |
| PdmI | GAANNNNTTC | 2 cut(s) | 72, 142 |
| PfeI | GAWTC | 6 cut(s) | 377, 384, 698, 1232, 1595, 2282 |
| PfoI | TCCNGGA | 1 cut(s) | 182 |
| PkrI | GCNGC | 7 cut(s) | 232, 331, 527, 595, 1636, 2275, 2352 |
| PleI | GAGTC | 6 cut(s) | 523, 672, 1111, 1513, 1975, 2131 |
| PpsI | GAGTC | 6 cut(s) | 523, 672, 1111, 1513, 1975, 2131 |
| Ppu21I | YACGTR | 1 cut(s) | 544 |
| PshBI | ATTAAT | 1 cut(s) | 2451 |
| PsiI | TTATAA | 1 cut(s) | 1029 |
| Psp6I | CCWGG | 5 cut(s) | 182, 423, 629, 891, 1295 |
| PspGI | CCWGG | 5 cut(s) | 182, 423, 629, 891, 1295 |
| PspN4I | GGNNCC | 2 cut(s) | 849, 1563 |
| PspPI | GGNCC | 2 cut(s) | 421, 506 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1449, 1481, 1861, 1893 |
| PsuI | RGATCY | 4 cut(s) | 955, 1034, 1800, 1886 |
| RsaI | GTAC | 1 cut(s) | 1902 |
| RsaNI | GTAC | 1 cut(s) | 1901 |
| RseI | CAYNNNNRTG | 3 cut(s) | 99, 1046, 1341 |
| SalI | GTCGAC | 1 cut(s) | 1486 |
| SapI | GCTCTTC | 2 cut(s) | 2319, 2340 |
| SatI | GCNGC | 7 cut(s) | 231, 330, 526, 594, 1635, 2274, 2351 |
| Sau96I | GGNCC | 2 cut(s) | 421, 506 |
| ScaI | AGTACT | 1 cut(s) | 1902 |
| SchI | GAGTC | 6 cut(s) | 524, 672, 1111, 1514, 1976, 2131 |
| ScrFI | CCNGG | 5 cut(s) | 184, 425, 631, 893, 1297 |
| SduI | GDGCHC | 4 cut(s) | 1003, 1525, 2054, 2476 |
| SfaNI | GCATC | 4 cut(s) | 1834, 1842, 2036, 2068 |
| SfcI | CTRYAG | 1 cut(s) | 1263 |
| Sfr274I | CTCGAG | 1 cut(s) | 519 |
| SlaI | CTCGAG | 1 cut(s) | 519 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 99, 1046, 1341 |
| SmlI | CTYRAG | 4 cut(s) | 519, 1325, 1473, 1964 |
| SmoI | CTYRAG | 4 cut(s) | 519, 1325, 1473, 1964 |
| SphI | GCATGC | 1 cut(s) | 1077 |
| SsiI | CCGC | 4 cut(s) | 231, 609, 1529, 1683 |
| SspMI | CTAG | 7 cut(s) | 338, 381, 675, 959, 1701, 1971, 2339 |
| StyD4I | CCNGG | 5 cut(s) | 182, 423, 629, 891, 1295 |
| StyI | CCWWGG | 1 cut(s) | 478 |
| TaaI | ACNGT | 9 cut(s) | 879, 942, 1190, 1447, 1546, 1650, 1913, 2005, 2154 |
| TaiI | ACGT | 3 cut(s) | 546, 616, 1021 |
| TaqI | TCGA | 4 cut(s) | 520, 1093, 1235, 1487 |
| TatI | WGTACW | 1 cut(s) | 1900 |
| TauI | GCSGC | 1 cut(s) | 233 |
| TfiI | GAWTC | 6 cut(s) | 377, 384, 698, 1232, 1595, 2282 |
| TscAI | CASTG | 4 cut(s) | 947, 1003, 1450, 1551 |
| TseFI | GTSAC | 4 cut(s) | 490, 599, 614, 1352 |
| TseI | GCWGC | 6 cut(s) | 329, 525, 593, 1634, 2273, 2350 |
| Tsp45I | GTSAC | 4 cut(s) | 490, 599, 614, 1352 |
| TspGWI | ACGGA | 2 cut(s) | 102, 1087 |
| TspRI | CASTG | 4 cut(s) | 947, 1003, 1450, 1551 |
| VspI | ATTAAT | 1 cut(s) | 2451 |
| XapI | RAATTY | 4 cut(s) | 68, 1510, 2364, 2393 |
| XbaI | TCTAGA | 1 cut(s) | 380 |
| XceI | RCATGY | 2 cut(s) | 1077, 2405 |
| XhoI | CTCGAG | 1 cut(s) | 519 |
| XmiI | GTMKAC | 3 cut(s) | 116, 225, 1487 |
| XmnI | GAANNNNTTC | 2 cut(s) | 72, 142 |
| XspI | CTAG | 7 cut(s) | 338, 381, 675, 959, 1701, 1971, 2339 |
| ZrmI | AGTACT | 1 cut(s) | 1902 |