Rw2G019410

Plant mobile domain

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
25648587 .. 25652635
4049 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G019410.1

Sequence Viewer

Length: 2520 bp
ATGAACCCACATGGAGAACTTTGCACTGAACGAGTTCCCGGAAAAGGCGAACGTGTAGCCAAAAACGGTCGGGAATACAAGAGATCTCTTCCTTTAAGTTCGATCAAGCTTACCATGTCGCTTGAGAGTCGGCCAACGTGGGCTACTCGGGCCAGTGTGCGTTCTGGGATTCTTAGATTTGACCCTCATGCAGAGGATGAGGTCATCAAATCGTGCCCAAGTTATGGCAACGTGTTTCAGGCCTATACTCTGGAAAAGGTGAACAATGCTGAGCATGGTGATGACAAGATGTTGGTCGGAATGAACTTTTATCCGGCACTGCACAGGATGTTGCAGAGTAAGCAAGAATGGGGCCATGATTTTAAATTTCGAGGTCGATCAATCTTTGGCTTTGGCGTATTAGAATGGACTGAAACTATCTTGGAGACCTTCAAGGATACCTTATACAAAGCAGGTATATATGGAGCTGTTGCTGTTTCTCGCTATCCTTACGAGTGTTCAAAGAATGTTTGGAGGGCATTTTGTGAATTATGGGGCCCTTTGTCCAACACATTGCATTTTGCCGATGGTGAGATGAGCATTTCTTTATCTGACTTGCAAGTTATCGGAGGTCTGCCCATTTCTGGCGTTCCGTATGAAGAATTTCTTCCGACTAACAAGGATTTGCGGAATAAAGATTTATATCCTCCCACAGTACTGGAGCTTTTACAGATACATTCTGCATTGTGTATTGAGTATGGGTACGATGCCATTTACTGGGATCAATGGCTTACCCATTTTTTCCGAGGGGAACTCATATATGCTTCACCTAGTGAAGGCAAGGCAGTGCTGCCGAAGCCAAGGACCCCTAAACTACCATTGAGAATTTCTGAGGAAGGGAAGCTTGCTGCTTTTATTGTATTTTGGTTGTGCAGGTTTGTCTTACCCGCATGGGATAAAACAATAAGGCCAGAGACATTTCATATGGCGTGTTTGATGGCAAAAGGAGTTAAAGTTTCCATTGCACCAACAACATTAGGATATATTTATCACCGTCTTGGAGAAATTGCTTCTCATCCGGTAGGGGATGTTCCCCCCAAAGTGTGCTTACCCATACATTATGTACTTGGCTGGCTCGGGGAATATTTTCCACAGTTGTGTAAACGACGAGCGGACAGTGAGTTTCCAGCAGATTATCCGCGTCTAGCGAGGTATGCTTATGTTGCAAGCAAAGATTTGTCAATTACTTGTGCCAGAATGGTCTTTCGGGATAACAAGTCTGTAATCTATCGTCCCCATGCTTTTCTCGAAACTGAGGGCTGTTTTTTGTTAGACGATGAGACTCTGTCAGATGAGAGATTTGAGTTTCTTTTTGGCATACGCTCTGCATGCCTTCCTGTGAGAGTCGATGGTCAGCTCATTTTAGAGCCGTATTATCCTAACAGATTTGCACGTCAATTCGGCTATGATCAGAGTGTTCCCTCTAACCGCCTCTCTTTTAGTGTGTCGAAGAGGAAGCAGTGTTTTGTTGAAGATTTAGCGAGAGCCCAATCTATTCTTTACAGGAGGAATACAACAGCTCAGTTTTATATCCCGAGATCGACACGTGAAGGAGAATGCACTTGGTGGTACTGCAAGTGGTGGTTGAAAGCTTGTATACCTTATTTGGGGCTTTCCGTATCGAAGACTTTCAAGACTTTCACTCAAAAATCTCCTGAGCCCGATCATCGTGTCTTTATAGTGAACAAACTTGCTGAAGTTTCTGCGGATTTGAGAAAAGAAGTTCAGATTTCATCTTTACAGAGGCCAGAGAGTCAGAATCTTCAAACGAGCCTTAGCAAGGTTGGGCCAGATGGTGATAACCTTATCAGCAGTGAGCATATTAACCATGATAAGATGGCGACCCTTAAAGGGACAGTATCCAGAGAGGTGAGTCTTCCTAAGACAGGCTCTGGCACTCAAAAGGCACTCAAGAGGAAACCTGACAGTTTACATCCTTCTAATCCTTTAGCAGTTGTTCAAAATGTCCAACAAACAGAAAGTGGATTTAGCTCTAATACTGATCCTTCTAGAGCGGAAATTGTAGCTCGAGCTTCTAAAAGGCAACCTGTAGAGCGTCAGAGCAATGGGCGTCCTCAAAGGGCTCAAACTACTATTGATCAAGGTGTTAAGAAAACAGCTGTGCCTCAGAAAGCCTGTATTTCTAGCAAAAATCCCTCAACCAAGTGCATGCCAACTGTAGAGGATGTGGGGAACTTTCTATCAGCCATAGTCGATCCTGGGCTGGCTTTATTCATGAAGAACTATCTTATTGGTCATGTGAGTGACATTTTTGTGAAAGTTTCTTCCTCAAAGACACCAGAAGATTTATTGGCCCATCGTGAAGAAATCCAATTAGCTTTGGGTATGCTCCATCCAGTCATTGAGTCTTTGAAGTCTGGTAAAGATCTGTTCGAGAAATTTACCTCTACCATTAGAGATATGCTAGCGGCAGCAGTGGATTCTTCGAGAACTATTGCACTTCTGAAAGAGAGCACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

839

Amino Acids

94.77

Weight (kDa)

8.89

Isoelectric Point (pI)

48.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 152 - 541 1.1e-36 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000253)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28912 FvH4_3g31370 FvH4_3g31371 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_6g28991 FvH4_7g16740 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610
malus_domestica MD10G1126100.v1.1 MD10G1312700.v1.1
rosa_chinensis RchiOBHm_Chr6g0276621
rosa_laevigata RLG00000023327 RLG00000023328
rosa_multiflora Rmu_co8195922.1_g000001 Rmu_co8303105.1_g000001 Rmu_co8385689.1_g000001 Rmu_sc0000385.1_g000010 Rmu_sc0000594.1_g000002 Rmu_sc0000857.1_g000010 Rmu_sc0001016.1_g000053 Rmu_sc0001468.1_g000028 Rmu_sc0001548.1_g000047 Rmu_sc0001548.1_g000048 Rmu_sc0002281.1_g000026 Rmu_sc0002281.1_g000027 Rmu_sc0002281.1_g000028 Rmu_sc0002478.1_g000001 Rmu_sc0002513.1_g000014 Rmu_sc0002662.1_g000017 Rmu_sc0003936.1_g000040 Rmu_sc0004084.1_g000047 Rmu_sc0005529.1_g000005 Rmu_sc0005529.1_g000006 Rmu_sc0005728.1_g000010 Rmu_sc0005747.1_g000017 Rmu_sc0005747.1_g000018 Rmu_sc0006385.1_g000001 Rmu_sc0006550.1_g000019 Rmu_sc0006803.1_g000033 Rmu_sc0007102.1_g000011 Rmu_sc0011018.1_g000001 Rmu_sc0011452.1_g000014 Rmu_sc0011805.1_g000001 Rmu_sc0011805.1_g000002 Rmu_sc0012566.1_g000001 Rmu_sc0013807.1_g000007 Rmu_sc0015817.1_g000001 Rmu_sc0015930.1_g000011 Rmu_sc0018873.1_g000003 Rmu_sc0020929.1_g000001
rosa_roxburghii Rroxscaffold_2G00081310 Rroxscaffold_2G00111790 Rroxscaffold_5G00349530 Rroxscaffold_5G00356270 Rroxscaffold_5G00356280 Rroxscaffold_5G00356290
rosa_rugosa Rorug01G0056400 Rorug01G0056500 Rorug02G0247000 Rorug03G0271700 Rorug04G0157900 Rorug05G0221700 Rorug05G0251400 Rorug05G0251400 Rorug06G0087300 Rorug07G0221900 Rorug07G0221900
rosa_samantha Rh1AG073200 Rh1AG073300 Rh1AG124600 Rh1AG124700 Rh1BG091900 Rh1CG031600 Rh1CG072100 Rh1CG072200 Rh1CG118800 Rh1CG276600 Rh1CG276700 Rh1DG077300 Rh2BG192000 Rh2BG330900 Rh2BG331000 Rh2BG517700 Rh2BG517800 Rh2CG188300 Rh2DG120800 Rh2DG323900 Rh2DG420700 Rh2DG433000 Rh2DG529400 Rh2DG529500 Rh3DG358100 Rh3DG358200 Rh4BG129700 Rh4BG129800 Rh4BG129900 Rh4BG166400 Rh4CG032000 Rh4DG024800 Rh4DG039500 Rh5AG223400 Rh5BG244500 Rh5BG244600 Rh5BG244700 Rh5CG363000 Rh5CG366900 Rh6AG117500 Rh6AG188600 Rh6AG188700 Rh6AG188800 Rh6BG111400 Rh6BG140800 Rh6BG178800 Rh6DG124100 Rh6DG210000 Rh7AG441200 Rh7BG296800 Rh7BG413900 Rh7BG414000 Rh7BG452400 Rh7DG234000 Rh7DG234100
rosa_wichuraiana Rw2G019410 Rw5G042140 Rw7G019590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 443, 903
AccB7I CCANNNNNTGG 2 cut(s) 224, 756
AccBSI CCGCTC 2 cut(s) 1151, 2054
AccI GTMKAC 1 cut(s) 1636
AccII CGCG 1 cut(s) 1180
AciI CCGC 8 cut(s) 667, 927, 1151, 1178, 1468, 1745, 2054, 2468
AclWI GGATC 3 cut(s) 768, 2036, 2249
AcoI YGGCCR 1 cut(s) 131
AcsI RAATTY 4 cut(s) 365, 641, 864, 2438
AcuI CTGAAG 1 cut(s) 1755
AcvI CACGTG 1 cut(s) 1586
AcyI GRCGYC 1 cut(s) 2110
AdeI CACNNNGTG 2 cut(s) 812, 1605
AfaI GTAC 4 cut(s) 696, 743, 1104, 1610
AfiI CCNNNNNNNGG 9 cut(s) 44, 224, 623, 756, 815, 1646, 1819, 1890, 1925
AflIII ACRYGT 3 cut(s) 52, 231, 1583
AgsI TTSAA 8 cut(s) 433, 501, 1511, 1627, 1672, 1805, 2000, 2413
AjiI CACGTC 1 cut(s) 1433
AjnI CCWGG 1 cut(s) 2257
AleI CACNNNNGTG 1 cut(s) 1135
Alw21I GWGCWC 1 cut(s) 2516
Alw26I GTCTC 3 cut(s) 419, 947, 1313
AlwI GGATC 3 cut(s) 768, 2036, 2249
AlwNI CAGNNNCTG 1 cut(s) 1931
Ama87I CYCGRG 4 cut(s) 147, 1115, 1573, 2067
AoxI GGCC 9 cut(s) 131, 150, 240, 352, 535, 947, 1784, 1826, 2352
ApaI GGGCCC 1 cut(s) 539
ApeKI GCWGC 3 cut(s) 829, 887, 2471
ApoI RAATTY 4 cut(s) 365, 641, 864, 2438
Asp700I GAANNNNTTC 5 cut(s) 33, 642, 645, 1125, 1667
AspS9I GGNCC 7 cut(s) 150, 352, 535, 536, 843, 1826, 2353
AsuC2I CCSGG 1 cut(s) 39
AsuHPI GGTGA 7 cut(s) 271, 290, 581, 798, 1022, 1847, 1921
AsuNHI GCTAGC 1 cut(s) 2464
AvaI CYCGRG 4 cut(s) 147, 1115, 1573, 2067
AvaII GGWCC 1 cut(s) 843
BaeGI GKGCMC 2 cut(s) 218, 539
BanII GRGCYC 4 cut(s) 539, 1528, 1701, 2125
BbrPI CACGTG 1 cut(s) 1586
BbsI GAAGAC 2 cut(s) 1670, 1907
Bbv12I GWGCWC 1 cut(s) 2516
BbvI GCAGC 3 cut(s) 816, 874, 2483
BccI CCATC 7 cut(s) 560, 970, 1382, 1826, 1870, 2364, 2400
BceAI ACGGC 1 cut(s) 1393
BciT130I CCWGG 1 cut(s) 2259
BciVI GTATCC 2 cut(s) 430, 1909
BclI TGATCA 2 cut(s) 1447, 2137
BcnI CCSGG 1 cut(s) 39
BcoDI GTCTC 3 cut(s) 419, 947, 1313
BfaI CTAG 5 cut(s) 810, 1184, 2049, 2184, 2465
BfmI CTRYAG 2 cut(s) 2088, 2217
BfuAI ACCTGC 2 cut(s) 443, 903
BfuI GTATCC 2 cut(s) 430, 1909
BglII AGATCT 2 cut(s) 83, 2425
BisI GCNGC 4 cut(s) 830, 888, 2469, 2472
BlpI GCTNAGC 1 cut(s) 270
BlsI GCNGC 4 cut(s) 831, 889, 2470, 2473
BmcAI AGTACT 1 cut(s) 696
Bme1390I CCNGG 2 cut(s) 39, 2259
Bme18I GGWCC 1 cut(s) 843
BmeT110I CYCGRG 4 cut(s) 147, 1115, 1573, 2067
BmgBI CACGTC 1 cut(s) 1433
BmgT120I GGNCC 7 cut(s) 150, 352, 535, 536, 843, 1826, 2353
BmiI GGNNCC 4 cut(s) 353, 536, 537, 845
BmrFI CCNGG 2 cut(s) 39, 2259
BmrI ACTGGG 1 cut(s) 766
BmsI GCATC 1 cut(s) 736
BmtI GCTAGC 1 cut(s) 2468
BmuI ACTGGG 1 cut(s) 766
BpiI GAAGAC 2 cut(s) 1670, 1907
BplI GAGNNNNNCTC 2 cut(s) 777, 809
BpmI CTGGAG 1 cut(s) 719
Bpu10I CCTNAGC 2 cut(s) 1695, 1814
Bpu1102I GCTNAGC 1 cut(s) 270
BpuEI CTTGAG 2 cut(s) 143, 1934
BpuMI CCSGG 1 cut(s) 39
BsaAI YACGTR 1 cut(s) 1586
BsaBI GATNNNNATC 1 cut(s) 681
BsaHI GRCGYC 1 cut(s) 2110
BsaI GGTCTC 1 cut(s) 419
BsaJI CCNNGG 3 cut(s) 784, 839, 2258
BsaWI WCCGGW 1 cut(s) 1057
BsaXI ACNNNNNCTCC 2 cut(s) 978, 1008
Bsc4I CCNNNNNNNGG 9 cut(s) 44, 224, 623, 756, 815, 1646, 1819, 1890, 1925
Bse1I ACTGG 4 cut(s) 153, 702, 761, 2396
Bse3DI GCAATG 3 cut(s) 551, 999, 2110
Bse8I GATNNNNATC 1 cut(s) 681
BseBI CCWGG 1 cut(s) 2259
BseDI CCNNGG 3 cut(s) 784, 839, 2258
BseGI GGATG 7 cut(s) 202, 333, 1054, 1072, 1972, 2230, 2392
BseJI GATNNNNATC 1 cut(s) 681
BseLI CCNNNNNNNGG 9 cut(s) 44, 224, 623, 756, 815, 1646, 1819, 1890, 1925
BseMI GCAATG 3 cut(s) 551, 999, 2110
BseMII CTCAG 6 cut(s) 261, 861, 1284, 1574, 1686, 2180
BseNI ACTGG 4 cut(s) 153, 702, 761, 2396
BseSI GKGCMC 2 cut(s) 218, 539
BseXI GCAGC 3 cut(s) 816, 874, 2483
BsgI GTGCAG 2 cut(s) 305, 931
Bsh1236I CGCG 1 cut(s) 1180
Bsh1285I CGRYCG 1 cut(s) 70
BshFI GGCC 9 cut(s) 133, 152, 242, 354, 537, 949, 1786, 1828, 2354
BsiEI CGRYCG 1 cut(s) 70
BsiHKAI GWGCWC 1 cut(s) 2516
BsiHKCI CYCGRG 4 cut(s) 147, 1115, 1573, 2067
BsiSI CCGG 3 cut(s) 39, 314, 1058
BslFI GGGAC 2 cut(s) 1257, 1906
BslI CCNNNNNNNGG 9 cut(s) 44, 224, 623, 756, 815, 1646, 1819, 1890, 1925
BsmAI GTCTC 3 cut(s) 419, 947, 1313
BsmFI GGGAC 2 cut(s) 1257, 1906
BsmI GAATGC 1 cut(s) 1601
BsnI GGCC 9 cut(s) 133, 152, 242, 354, 537, 949, 1786, 1828, 2354
Bso31I GGTCTC 1 cut(s) 419
BsoBI CYCGRG 4 cut(s) 147, 1115, 1573, 2067
Bsp120I GGGCCC 1 cut(s) 535
Bsp1286I GDGCHC 6 cut(s) 218, 539, 1528, 1701, 2125, 2516
Bsp1720I GCTNAGC 1 cut(s) 270
BspACI CCGC 8 cut(s) 667, 927, 1151, 1178, 1468, 1745, 2054, 2468
BspANI GGCC 9 cut(s) 133, 152, 242, 354, 537, 949, 1786, 1828, 2354
BspCNI CTCAG 6 cut(s) 262, 862, 1285, 1573, 1687, 2179
BspFNI CGCG 1 cut(s) 1180
BspHI TCATGA 1 cut(s) 2274
BspLI GGNNCC 4 cut(s) 353, 536, 537, 845
BspMI ACCTGC 2 cut(s) 443, 903
BspOI GCTAGC 1 cut(s) 2468
BspPI GGATC 3 cut(s) 768, 2036, 2249
BspTNI GGTCTC 1 cut(s) 419
BsrBI CCGCTC 2 cut(s) 1151, 2054
BsrDI GCAATG 3 cut(s) 551, 999, 2110
BsrI ACTGG 4 cut(s) 153, 702, 761, 2396
BssECI CCNNGG 3 cut(s) 784, 839, 2258
BssNAI GTATAC 1 cut(s) 1637
BssNI GRCGYC 1 cut(s) 2110
BssT1I CCWWGG 1 cut(s) 839
Bst1107I GTATAC 1 cut(s) 1637
Bst2UI CCWGG 1 cut(s) 2259
Bst4CI ACNGT 8 cut(s) 68, 694, 1034, 1134, 1157, 1897, 1967, 2218
Bst6I CTCTTC 2 cut(s) 93, 1484
BstACI GRCGYC 1 cut(s) 2110
BstBAI YACGTR 1 cut(s) 1586
BstC8I GCNNGC 7 cut(s) 885, 1112, 1207, 1369, 2210, 2265, 2466
BstDEI CTNAG 9 cut(s) 173, 270, 870, 1293, 1560, 1695, 1814, 1920, 2166
BstENI CCTNNNNNAGG 3 cut(s) 813, 1817, 1923
BstF5I GGATG 7 cut(s) 202, 333, 1054, 1072, 1972, 2230, 2392
BstFNI CGCG 1 cut(s) 1180
BstMAI GTCTC 3 cut(s) 419, 947, 1313
BstMCI CGRYCG 1 cut(s) 70
BstMWI GCNNNNNNNGC 6 cut(s) 149, 340, 835, 1193, 1202, 1368
BstNI CCWGG 1 cut(s) 2259
BstNSI RCATGY 2 cut(s) 1371, 2212
BstSCI CCNGG 2 cut(s) 37, 2257
BstSFI CTRYAG 2 cut(s) 2088, 2217
BstSLI GKGCMC 2 cut(s) 218, 539
BstUI CGCG 1 cut(s) 1180
BstV1I GCAGC 3 cut(s) 816, 874, 2483
BstV2I GAAGAC 2 cut(s) 1670, 1907
BstX2I RGATCY 2 cut(s) 83, 2425
BstXI CCANNNNNNTGG 1 cut(s) 697
BstYI RGATCY 2 cut(s) 83, 2425
BstZ17I GTATAC 1 cut(s) 1637
BsuI GTATCC 2 cut(s) 430, 1909
BsuRI GGCC 9 cut(s) 133, 152, 242, 354, 537, 949, 1786, 1828, 2354
BtrI CACGTC 1 cut(s) 1433
BtsCI GGATG 7 cut(s) 202, 333, 1054, 1072, 1972, 2230, 2392
BtsI GCAGTG 5 cut(s) 317, 831, 1505, 1858, 2481
BtsIMutI CAGTG 8 cut(s) 24, 160, 317, 831, 1162, 1505, 1858, 2481
BveI ACCTGC 2 cut(s) 443, 903
Cac8I GCNNGC 7 cut(s) 885, 1112, 1207, 1369, 2210, 2265, 2466
CaiI CAGNNNCTG 1 cut(s) 1931
CciI TCATGA 1 cut(s) 2274
Cfr13I GGNCC 7 cut(s) 150, 352, 535, 536, 843, 1826, 2353
CseI GACGC 3 cut(s) 1169, 2084, 2099
Csp6I GTAC 4 cut(s) 695, 742, 1103, 1609
CviQI GTAC 4 cut(s) 695, 742, 1103, 1609
DdeI CTNAG 9 cut(s) 173, 270, 870, 1293, 1560, 1695, 1814, 1920, 2166
DraI TTTAAA 1 cut(s) 364
DraIII CACNNNGTG 2 cut(s) 812, 1605
EaeI YGGCCR 1 cut(s) 131
Eam1104I CTCTTC 2 cut(s) 93, 1484
EarI CTCTTC 2 cut(s) 93, 1484
Eco130I CCWWGG 1 cut(s) 839
Eco147I AGGCCT 1 cut(s) 242
Eco24I GRGCYC 4 cut(s) 539, 1528, 1701, 2125
Eco31I GGTCTC 1 cut(s) 419
Eco47I GGWCC 1 cut(s) 843
Eco57I CTGAAG 1 cut(s) 1755
Eco72I CACGTG 1 cut(s) 1586
Eco88I CYCGRG 4 cut(s) 147, 1115, 1573, 2067
EcoNI CCTNNNNNAGG 3 cut(s) 813, 1817, 1923
EcoO109I RGGNCCY 3 cut(s) 535, 536, 843
EcoRII CCWGG 1 cut(s) 2257
EcoT14I CCWWGG 1 cut(s) 839
EcoT38I GRGCYC 4 cut(s) 539, 1528, 1701, 2125
ErhI CCWWGG 1 cut(s) 839
FalI AAGNNNNNCTT 6 cut(s) 425, 457, 630, 662, 867, 899
FaqI GGGAC 2 cut(s) 1257, 1906
FauI CCCGC 1 cut(s) 934
FauNDI CATATG 1 cut(s) 963
FbaI TGATCA 2 cut(s) 1447, 2137
FblI GTMKAC 1 cut(s) 1636
Fnu4HI GCNGC 4 cut(s) 830, 888, 2469, 2472
FokI GGATG 7 cut(s) 209, 340, 1041, 1079, 1959, 2237, 2379
FriOI GRGCYC 4 cut(s) 539, 1528, 1701, 2125
Fsp4HI GCNGC 4 cut(s) 830, 888, 2469, 2472
FspBI CTAG 5 cut(s) 810, 1184, 2049, 2184, 2465
GluI GCNGC 4 cut(s) 830, 888, 2469, 2472
GsuI CTGGAG 1 cut(s) 719
HaeIII GGCC 9 cut(s) 133, 152, 242, 354, 537, 949, 1786, 1828, 2354
HapII CCGG 3 cut(s) 39, 314, 1058
HgaI GACGC 3 cut(s) 1169, 2084, 2099
Hin1I GRCGYC 1 cut(s) 2110
HindIII AAGCTT 3 cut(s) 107, 881, 1629
HinfI GANTC 9 cut(s) 127, 169, 1321, 1383, 1792, 1798, 1912, 2405, 2480
HpaII CCGG 3 cut(s) 39, 314, 1058
HphI GGTGA 7 cut(s) 271, 290, 581, 798, 1022, 1847, 1921
Hpy166II GTNNAC 5 cut(s) 262, 1142, 1637, 1723, 1970
Hpy8I GTNNAC 5 cut(s) 262, 1142, 1637, 1723, 1970
Hpy99I CGWCG 1 cut(s) 1149
HpyAV CCTTC 7 cut(s) 439, 809, 869, 1382, 1583, 1986, 2055
HpyCH4III ACNGT 8 cut(s) 68, 694, 1034, 1134, 1157, 1897, 1967, 2218
HpyCH4IV ACGT 5 cut(s) 52, 137, 231, 1432, 1585
HpyF10VI GCNNNNNNNGC 6 cut(s) 149, 340, 835, 1193, 1202, 1368
HpyF3I CTNAG 9 cut(s) 173, 270, 870, 1293, 1560, 1695, 1814, 1920, 2166
HpySE526I ACGT 5 cut(s) 52, 137, 231, 1432, 1585
Hsp92I GRCGYC 1 cut(s) 2110
Ksp22I TGATCA 2 cut(s) 1447, 2137
LmnI GCTCC 3 cut(s) 464, 700, 2394
Lsp1109I GCAGC 3 cut(s) 816, 874, 2483
LweI GCATC 1 cut(s) 736
MaeI CTAG 5 cut(s) 810, 1184, 2049, 2184, 2465
MaeII ACGT 5 cut(s) 52, 137, 231, 1432, 1585
MaeIII GTNAC 1 cut(s) 2303
MbiI CCGCTC 2 cut(s) 1151, 2054
MflI RGATCY 2 cut(s) 83, 2425
MhlI GDGCHC 6 cut(s) 218, 539, 1528, 1701, 2125, 2516
MlyI GAGTC 6 cut(s) 136, 1315, 1392, 1801, 1921, 2414
MmeI TCCRAC 4 cut(s) 277, 570, 674, 2032
MroXI GAANNNNTTC 5 cut(s) 33, 642, 645, 1125, 1667
MseI TTAA 6 cut(s) 95, 363, 990, 1863, 1887, 2148
MslI CAYNNNNRTG 4 cut(s) 279, 1135, 2301, 2312
MspA1I CMGCKG 1 cut(s) 2159
MspI CCGG 3 cut(s) 39, 314, 1058
MspR9I CCNGG 2 cut(s) 39, 2259
Mva1269I GAATGC 1 cut(s) 1601
MvaI CCWGG 1 cut(s) 2259
MvnI CGCG 1 cut(s) 1180
MwoI GCNNNNNNNGC 6 cut(s) 149, 340, 835, 1193, 1202, 1368
NciI CCSGG 1 cut(s) 39
NdeI CATATG 1 cut(s) 963
NheI GCTAGC 1 cut(s) 2464
NlaIV GGNNCC 4 cut(s) 353, 536, 537, 845
NmuCI GTSAC 1 cut(s) 2303
NspI RCATGY 2 cut(s) 1371, 2212
OliI CACNNNNGTG 1 cut(s) 1135
PaeI GCATGC 2 cut(s) 1371, 2212
PaeR7I CTCGAG 1 cut(s) 2067
PagI TCATGA 1 cut(s) 2274
PceI AGGCCT 1 cut(s) 242
PctI GAATGC 1 cut(s) 1601
PdmI GAANNNNTTC 5 cut(s) 33, 642, 645, 1125, 1667
PfeI GAWTC 3 cut(s) 169, 1798, 2480
PflFI GACNNNGTC 1 cut(s) 1324
PflMI CCANNNNNTGG 2 cut(s) 224, 756
PfoI TCCNGGA 1 cut(s) 37
PkrI GCNGC 4 cut(s) 831, 889, 2470, 2473
PleI GAGTC 6 cut(s) 135, 1315, 1391, 1800, 1920, 2413
PmaCI CACGTG 1 cut(s) 1586
PmlI CACGTG 1 cut(s) 1586
PpsI GAGTC 6 cut(s) 135, 1315, 1391, 1800, 1920, 2413
Ppu21I YACGTR 1 cut(s) 1586
PpuMI RGGWCCY 1 cut(s) 843
Psp5II RGGWCCY 1 cut(s) 843
Psp6I CCWGG 1 cut(s) 2257
PspCI CACGTG 1 cut(s) 1586
PspGI CCWGG 1 cut(s) 2257
PspN4I GGNNCC 4 cut(s) 353, 536, 537, 845
PspOMI GGGCCC 1 cut(s) 535
PspPI GGNCC 7 cut(s) 150, 352, 535, 536, 843, 1826, 2353
PspPPI RGGWCCY 1 cut(s) 843
PspXI VCTCGAGB 1 cut(s) 2067
PsrI GAACNNNNNNTAC 2 cut(s) 1053, 1085
PstNI CAGNNNCTG 1 cut(s) 1931
PsuI RGATCY 2 cut(s) 83, 2425
PsyI GACNNNGTC 1 cut(s) 1324
PvuII CAGCTG 1 cut(s) 2159
RsaI GTAC 4 cut(s) 696, 743, 1104, 1610
RsaNI GTAC 4 cut(s) 695, 742, 1103, 1609
RseI CAYNNNNRTG 4 cut(s) 279, 1135, 2301, 2312
SaqAI TTAA 6 cut(s) 95, 363, 990, 1863, 1887, 2148
SatI GCNGC 4 cut(s) 830, 888, 2469, 2472
Sau96I GGNCC 7 cut(s) 150, 352, 535, 536, 843, 1826, 2353
ScaI AGTACT 1 cut(s) 696
SchI GAGTC 6 cut(s) 136, 1315, 1392, 1801, 1921, 2414
ScrFI CCNGG 2 cut(s) 39, 2259
SduI GDGCHC 6 cut(s) 218, 539, 1528, 1701, 2125, 2516
SfaNI GCATC 1 cut(s) 736
SfcI CTRYAG 2 cut(s) 2088, 2217
Sfr274I CTCGAG 1 cut(s) 2067
SinI GGWCC 1 cut(s) 843
SlaI CTCGAG 1 cut(s) 2067
SmiMI CAYNNNNRTG 4 cut(s) 279, 1135, 2301, 2312
SmlI CTYRAG 3 cut(s) 122, 1949, 2067
SmoI CTYRAG 3 cut(s) 122, 1949, 2067
SphI GCATGC 2 cut(s) 1371, 2212
SseBI AGGCCT 1 cut(s) 242
SsiI CCGC 8 cut(s) 667, 927, 1151, 1178, 1468, 1745, 2054, 2468
SspI AATATT 1 cut(s) 1124
SspMI CTAG 5 cut(s) 810, 1184, 2049, 2184, 2465
StuI AGGCCT 1 cut(s) 242
StyD4I CCNGG 2 cut(s) 37, 2257
StyI CCWWGG 1 cut(s) 839
TaaI ACNGT 8 cut(s) 68, 694, 1034, 1134, 1157, 1897, 1967, 2218
TaiI ACGT 5 cut(s) 55, 140, 234, 1435, 1588
TatI WGTACW 2 cut(s) 694, 1102
TauI GCSGC 1 cut(s) 2471
TfiI GAWTC 3 cut(s) 169, 1798, 2480
Tru1I TTAA 6 cut(s) 95, 363, 990, 1863, 1887, 2148
Tru9I TTAA 6 cut(s) 95, 363, 990, 1863, 1887, 2148
TscAI CASTG 8 cut(s) 31, 160, 324, 831, 1162, 1505, 1858, 2481
TseFI GTSAC 1 cut(s) 2303
TseI GCWGC 3 cut(s) 829, 887, 2471
Tsp45I GTSAC 1 cut(s) 2303
TspDTI ATGAA 7 cut(s) 17, 317, 651, 950, 1761, 2263, 2291
TspGWI ACGGA 2 cut(s) 621, 1645
TspRI CASTG 8 cut(s) 31, 160, 324, 831, 1162, 1505, 1858, 2481
Tth111I GACNNNGTC 1 cut(s) 1324
Van91I CCANNNNNTGG 2 cut(s) 224, 756
VpaK11BI GGWCC 1 cut(s) 843
XagI CCTNNNNNAGG 3 cut(s) 813, 1817, 1923
XapI RAATTY 4 cut(s) 365, 641, 864, 2438
XbaI TCTAGA 1 cut(s) 2048
XceI RCATGY 2 cut(s) 1371, 2212
XhoI CTCGAG 1 cut(s) 2067
XmiI GTMKAC 1 cut(s) 1636
XmnI GAANNNNTTC 5 cut(s) 33, 642, 645, 1125, 1667
XspI CTAG 5 cut(s) 810, 1184, 2049, 2184, 2465
ZrmI AGTACT 1 cut(s) 696
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.