Rmu_sc0011018.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011018.1
OG0000253
Physical Location & Seq
Forward (+)
161 .. 2674
2514 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011018.1_g000001.1.cds

Sequence Viewer

Length: 2271 bp
atggatgctcaaggatttctttgctccgagagagcgccaaagaagcaagggaaagatcttgactacggtcctgaataccgtagatcgttacctttgaactcggtcagtctcacagtgtcccttgagagtaggcctacctgggttaccactgccaacttgaattctggtcaccttagattcgatcctcatgccgaagacggtgtcataaagaatgttcgttatttcggtgctcattttgatgcttacacgttgatgaaggcaaacaatgaagaggacggtgacaacaagttcccagttggagaagatttttacccagcccttcatagaatgctgaagtgtaagaaagactggggtgaagacttctattttcgtggtcgggccatatttgagcatggcattctagaatggacggaaaccacgctaactaaatttgaagagactttagacgcagctggtatcttcggtgcagttactgtttcccgttatccgtatgagtattgcagtaatgtgtggagggcattctgtgagctgtgggggcctttaacaaacacttttcaccatgcagatggggaaatgagcatctctttgcatgatttgaatgttattggaggattgccggtttcaggagaaccatacgaagaattcattcctccaaataaagatctggtaaaggttgaattataccattctacggttgcagagctcttgaggatttatacctatctgtgcgctgcttataagagcagatatgtctactggccatggtggatcgaacatttttatcgtggggagataatttatggagcctatggtgaatgtaagaattctggggttccgaaactgagagaaccaaagattgagttgaagatttcaaagcaaggaagactggctgcattcctcgcgttctggcttagcaggttcgttctcccctccaacagtaagaagataaggcctgagactttctatatggcctctttgatggcacagggcatcagggtatctcttgcgcccacagtactgggttatgtgtaccatggtcttggtgagatggctacccactctgctggtgttcaaggcaggagtttaagcatcacagaggctcgtatggttttcaggaccaacaaatctgtcgtgcatcgccctatctctgtagcctgtgaaaaagaccgttttttgcttgatgacgacaaattgcctgatgtgttatttgaggtcctcatctgtatgtgttctgcagtgctgccagtgcgagttggcgagagtcttttccttgagccctattatccgaacaggtttgctcgtcaatttggtcttgatcagagtgttccctctaacaagctatcctttagtgtttctaaaaggcagcaatgtggtgttgaggatctgctgagggcacagactatcctgtataggaagaacactacctctcatttctttatcccatgctcttctcgttctggacagtgtacatggtggtactgcaggtggtggtcaagagcttgtactccttacttggggctatcggtgtcaaaaaccttcatgactttgaacaagcgccctcctgaaaagtcacagcgtgttttcgtcgtgcagaacttgagagaaatttctactgatgaacgtggtgggcacaaaagagttaggcttgaaaaggtagttgaagagactgtcgttatcccagtgaaatcttcttcaaatggtgaaccaaaggagctgttagtccatgttttggacatcagatcaagtcttgacatgcttcgacctgcaattaagcctctaaaagctggaaaactgcaacttgaagcgttcgtaactgctattgagaagatgttagaggtggtggaccagtcgttaaatactattgaggtccttgagcagagaactaccatggatgttgaacttgaggagtgtaagaaatccaagggaagtttagagtctcagcttatgggatcttccaaagagcttgaagccttgaaagccacggaatctgatatcatagcagatgagcagcgtgttcagaagaggcgatcagaatataatgctaagagacaatctcttgaagacactctacaagaactgaaggattccctgaaagagcatgttgaaagaggccagaagcttcaagaagacagagctgcttatatggcggagaaactccctgagattaagcaggcttcggcttcgtataagttggaaacagaggcgtatcagagcctgttcgattctttgttcccgttattccaggtgtgcaccacctcagtacagacttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

756

Amino Acids

86.44

Weight (kDa)

7.23

Isoelectric Point (pI)

48.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000253)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28912 FvH4_3g31370 FvH4_3g31371 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_6g28991 FvH4_7g16740 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610
malus_domestica MD10G1126100.v1.1 MD10G1312700.v1.1
rosa_chinensis RchiOBHm_Chr6g0276621
rosa_laevigata RLG00000023327 RLG00000023328
rosa_multiflora Rmu_co8195922.1_g000001 Rmu_co8303105.1_g000001 Rmu_co8385689.1_g000001 Rmu_sc0000385.1_g000010 Rmu_sc0000594.1_g000002 Rmu_sc0000857.1_g000010 Rmu_sc0001016.1_g000053 Rmu_sc0001468.1_g000028 Rmu_sc0001548.1_g000047 Rmu_sc0001548.1_g000048 Rmu_sc0002281.1_g000026 Rmu_sc0002281.1_g000027 Rmu_sc0002281.1_g000028 Rmu_sc0002478.1_g000001 Rmu_sc0002513.1_g000014 Rmu_sc0002662.1_g000017 Rmu_sc0003936.1_g000040 Rmu_sc0004084.1_g000047 Rmu_sc0005529.1_g000005 Rmu_sc0005529.1_g000006 Rmu_sc0005728.1_g000010 Rmu_sc0005747.1_g000017 Rmu_sc0005747.1_g000018 Rmu_sc0006385.1_g000001 Rmu_sc0006550.1_g000019 Rmu_sc0006803.1_g000033 Rmu_sc0007102.1_g000011 Rmu_sc0011018.1_g000001 Rmu_sc0011452.1_g000014 Rmu_sc0011805.1_g000001 Rmu_sc0011805.1_g000002 Rmu_sc0012566.1_g000001 Rmu_sc0013807.1_g000007 Rmu_sc0015817.1_g000001 Rmu_sc0015930.1_g000011 Rmu_sc0018873.1_g000003 Rmu_sc0020929.1_g000001
rosa_roxburghii Rroxscaffold_2G00081310 Rroxscaffold_2G00111790 Rroxscaffold_5G00349530 Rroxscaffold_5G00356270 Rroxscaffold_5G00356280 Rroxscaffold_5G00356290
rosa_rugosa Rorug01G0056400 Rorug01G0056500 Rorug02G0247000 Rorug03G0271700 Rorug04G0157900 Rorug05G0221700 Rorug05G0251400 Rorug05G0251400 Rorug06G0087300 Rorug07G0221900 Rorug07G0221900
rosa_samantha Rh1AG073200 Rh1AG073300 Rh1AG124600 Rh1AG124700 Rh1BG091900 Rh1CG031600 Rh1CG072100 Rh1CG072200 Rh1CG118800 Rh1CG276600 Rh1CG276700 Rh1DG077300 Rh2BG192000 Rh2BG330900 Rh2BG331000 Rh2BG517700 Rh2BG517800 Rh2CG188300 Rh2DG120800 Rh2DG323900 Rh2DG420700 Rh2DG433000 Rh2DG529400 Rh2DG529500 Rh3DG358100 Rh3DG358200 Rh4BG129700 Rh4BG129800 Rh4BG129900 Rh4BG166400 Rh4CG032000 Rh4DG024800 Rh4DG039500 Rh5AG223400 Rh5BG244500 Rh5BG244600 Rh5BG244700 Rh5CG363000 Rh5CG366900 Rh6AG117500 Rh6AG188600 Rh6AG188700 Rh6AG188800 Rh6BG111400 Rh6BG140800 Rh6BG178800 Rh6DG124100 Rh6DG210000 Rh7AG441200 Rh7BG296800 Rh7BG413900 Rh7BG414000 Rh7BG452400 Rh7DG234000 Rh7DG234100
rosa_wichuraiana Rw2G019410 Rw5G042140 Rw7G019590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 738
AarI CACCTGC 1 cut(s) 1473
Acc36I ACCTGC 3 cut(s) 906, 1473, 1771
AccB7I CCANNNNNTGG 1 cut(s) 1729
AccI GTMKAC 1 cut(s) 753
AccII CGCG 1 cut(s) 902
AciI CCGC 1 cut(s) 2147
AclWI GGATC 4 cut(s) 176, 776, 1389, 1957
AcoI YGGCCR 1 cut(s) 758
AcsI RAATTY 5 cut(s) 160, 428, 641, 823, 1605
AcuI CTGAAG 2 cut(s) 353, 2099
AdeI CACNNNGTG 1 cut(s) 1577
AfaI GTAC 6 cut(s) 1017, 1031, 1468, 1478, 1504, 2262
AfiI CCNNNNNNNGG 4 cut(s) 623, 691, 1514, 1729
AflIII ACRYGT 1 cut(s) 246
AjnI CCWGG 2 cut(s) 137, 2241
Alw21I GWGCWC 3 cut(s) 232, 705, 2252
Alw26I GTCTC 6 cut(s) 113, 431, 950, 1658, 1941, 2041
Alw44I GTGCAC 1 cut(s) 2248
AlwI GGATC 4 cut(s) 176, 776, 1389, 1957
AlwNI CAGNNNCTG 2 cut(s) 473, 2215
AoxI GGCC 7 cut(s) 131, 378, 536, 758, 950, 969, 2110
ApaLI GTGCAC 1 cut(s) 2248
ApeKI GCWGC 7 cut(s) 449, 731, 890, 1240, 1363, 2008, 2135
ApoI RAATTY 5 cut(s) 160, 428, 641, 823, 1605
ArsI GACNNNNNNTTYG 2 cut(s) 186, 218
Asp700I GAANNNNTTC 1 cut(s) 645
AspLEI GCGC 4 cut(s) 37, 731, 1009, 1557
AspS9I GGNCC 7 cut(s) 68, 378, 536, 1116, 1213, 1843, 1867
AsuHPI GGTGA 7 cut(s) 161, 290, 365, 548, 824, 1055, 1712
AvaII GGWCC 5 cut(s) 68, 1116, 1213, 1843, 1867
BaeGI GKGCMC 3 cut(s) 1396, 1632, 2252
BalI TGGCCA 1 cut(s) 760
BanII GRGCYC 2 cut(s) 705, 1278
BarI GAAGNNNNNNTAC 2 cut(s) 2052, 2084
BbsI GAAGAC 5 cut(s) 201, 363, 889, 2067, 2133
Bbv12I GWGCWC 3 cut(s) 232, 705, 2252
BbvCI CCTCAGC 1 cut(s) 1388
BbvI GCAGC 7 cut(s) 461, 718, 877, 1227, 1375, 2020, 2122
BccI CCATC 3 cut(s) 560, 973, 1042
BcgI CGANNNNNNTGC 2 cut(s) 170, 204
BciT130I CCWGG 2 cut(s) 139, 2243
BclI TGATCA 1 cut(s) 1315
BcoDI GTCTC 6 cut(s) 113, 431, 950, 1658, 1941, 2041
BfaI CTAG 1 cut(s) 401
BfmI CTRYAG 3 cut(s) 1149, 1233, 1480
BfoI RGCGCY 2 cut(s) 38, 1558
BfuAI ACCTGC 3 cut(s) 906, 1473, 1771
BglII AGATCT 2 cut(s) 55, 661
BisI GCNGC 7 cut(s) 450, 732, 891, 1241, 1364, 2009, 2136
BlpI GCTNAGC 1 cut(s) 911
BlsI GCNGC 7 cut(s) 451, 733, 892, 1242, 1365, 2010, 2137
BmcAI AGTACT 1 cut(s) 1017
Bme1390I CCNGG 2 cut(s) 139, 2243
Bme18I GGWCC 5 cut(s) 68, 1116, 1213, 1843, 1867
BmgT120I GGNCC 7 cut(s) 68, 378, 536, 1116, 1213, 1843, 1867
BmiI GGNNCC 3 cut(s) 537, 805, 834
BmrFI CCNGG 2 cut(s) 139, 2243
BmrI ACTGGG 4 cut(s) 287, 358, 1028, 1673
BmsI GCATC 5 cut(s) 229, 588, 999, 1098, 1144
BmuI ACTGGG 4 cut(s) 287, 358, 1028, 1673
BoxI GACNNNNGTC 1 cut(s) 66
BpiI GAAGAC 5 cut(s) 201, 363, 889, 2067, 2133
BplI GAGNNNNNCTC 2 cut(s) 2038, 2070
Bpu10I CCTNAGC 1 cut(s) 1388
Bpu1102I GCTNAGC 1 cut(s) 911
BpuEI CTTGAG 6 cut(s) 143, 727, 1292, 1618, 1892, 1922
BsaJI CCNNGG 6 cut(s) 138, 761, 1033, 1887, 1920, 1980
Bsc4I CCNNNNNNNGG 4 cut(s) 623, 691, 1514, 1729
Bse118I RCCGGY 1 cut(s) 616
Bse1I ACTGG 8 cut(s) 293, 353, 761, 891, 1023, 1244, 1679, 1846
Bse3DI GCAATG 1 cut(s) 1373
BseBI CCWGG 2 cut(s) 139, 2243
BseDI CCNNGG 6 cut(s) 138, 761, 1033, 1887, 1920, 1980
BseGI GGATG 2 cut(s) 10, 1897
BseLI CCNNNNNNNGG 4 cut(s) 623, 691, 1514, 1729
BseMI GCAATG 1 cut(s) 1373
BseMII CTCAG 6 cut(s) 833, 945, 1379, 1952, 2151, 2271
BseNI ACTGG 8 cut(s) 293, 353, 761, 891, 1023, 1244, 1679, 1846
BseRI GAGGAG 1 cut(s) 1919
BseSI GKGCMC 3 cut(s) 1396, 1632, 2252
BseXI GCAGC 7 cut(s) 461, 718, 877, 1227, 1375, 2020, 2122
BseYI CCCAGC 1 cut(s) 313
BsgI GTGCAG 2 cut(s) 486, 1610
Bsh1236I CGCG 1 cut(s) 902
BshFI GGCC 7 cut(s) 133, 380, 538, 760, 952, 971, 2112
BsiHKAI GWGCWC 3 cut(s) 232, 705, 2252
BsiSI CCGG 1 cut(s) 617
BslFI GGGAC 1 cut(s) 103
BslI CCNNNNNNNGG 4 cut(s) 623, 691, 1514, 1729
BsmAI GTCTC 6 cut(s) 113, 431, 950, 1658, 1941, 2041
BsmFI GGGAC 1 cut(s) 103
BsmI GAATGC 4 cut(s) 333, 396, 518, 893
BsnI GGCC 7 cut(s) 133, 380, 538, 760, 952, 971, 2112
Bsp1286I GDGCHC 6 cut(s) 232, 705, 1278, 1396, 1632, 2252
Bsp1407I TGTACA 1 cut(s) 1466
Bsp1720I GCTNAGC 1 cut(s) 911
Bsp19I CCATGG 3 cut(s) 761, 1033, 1887
BspACI CCGC 1 cut(s) 2147
BspANI GGCC 7 cut(s) 133, 380, 538, 760, 952, 971, 2112
BspCNI CTCAG 6 cut(s) 834, 946, 1380, 1951, 2152, 2270
BspFNI CGCG 1 cut(s) 902
BspHI TCATGA 1 cut(s) 1539
BspLI GGNNCC 3 cut(s) 537, 805, 834
BspMAI CTGCAG 2 cut(s) 1237, 1484
BspMI ACCTGC 3 cut(s) 906, 1473, 1771
BspPI GGATC 4 cut(s) 176, 776, 1389, 1957
BspQI GCTCTTC 1 cut(s) 1453
BsrDI GCAATG 1 cut(s) 1373
BsrFI RCCGGY 1 cut(s) 616
BsrGI TGTACA 1 cut(s) 1466
BsrI ACTGG 8 cut(s) 293, 353, 761, 891, 1023, 1244, 1679, 1846
BssAI RCCGGY 1 cut(s) 616
BssECI CCNNGG 6 cut(s) 138, 761, 1033, 1887, 1920, 1980
BssT1I CCWWGG 4 cut(s) 761, 1033, 1887, 1920
Bst2UI CCWGG 2 cut(s) 139, 2243
Bst6I CTCTTC 5 cut(s) 264, 429, 1453, 1656, 2015
BstAUI TGTACA 1 cut(s) 1466
BstC8I GCNNGC 1 cut(s) 2172
BstDEI CTNAG 9 cut(s) 173, 842, 911, 954, 1388, 1938, 2043, 2160, 2257
BstDSI CCRYGG 4 cut(s) 761, 1033, 1887, 1980
BstEII GGTNACC 2 cut(s) 142, 167
BstF5I GGATG 2 cut(s) 10, 1897
BstFNI CGCG 1 cut(s) 902
BstH2I RGCGCY 2 cut(s) 38, 1558
BstHHI GCGC 4 cut(s) 37, 731, 1009, 1557
BstMAI GTCTC 6 cut(s) 113, 431, 950, 1658, 1941, 2041
BstMWI GCNNNNNNNGC 6 cut(s) 43, 535, 899, 1246, 1976, 2144
BstNI CCWGG 2 cut(s) 139, 2243
BstNSI RCATGY 2 cut(s) 1756, 2102
BstPAI GACNNNNGTC 1 cut(s) 66
BstPI GGTNACC 2 cut(s) 142, 167
BstSCI CCNGG 2 cut(s) 137, 2241
BstSFI CTRYAG 3 cut(s) 1149, 1233, 1480
BstSLI GKGCMC 3 cut(s) 1396, 1632, 2252
BstUI CGCG 1 cut(s) 902
BstV1I GCAGC 7 cut(s) 461, 718, 877, 1227, 1375, 2020, 2122
BstV2I GAAGAC 5 cut(s) 201, 363, 889, 2067, 2133
BstX2I RGATCY 4 cut(s) 55, 661, 1381, 1949
BstXI CCANNNNNNTGG 4 cut(s) 566, 1018, 1040, 1064
BstYI RGATCY 4 cut(s) 55, 661, 1381, 1949
BsuRI GGCC 7 cut(s) 133, 380, 538, 760, 952, 971, 2112
BtgI CCRYGG 4 cut(s) 761, 1033, 1887, 1980
BtgZI GCGATG 1 cut(s) 1121
BtsCI GGATG 2 cut(s) 10, 1897
BtsI GCAGTG 2 cut(s) 147, 1242
BtsIMutI CAGTG 6 cut(s) 120, 147, 1242, 1251, 1469, 1686
BveI ACCTGC 3 cut(s) 906, 1473, 1771
Cac8I GCNNGC 1 cut(s) 2172
CaiI CAGNNNCTG 2 cut(s) 473, 2215
CciI TCATGA 1 cut(s) 1539
CfoI GCGC 4 cut(s) 37, 731, 1009, 1557
Cfr10I RCCGGY 1 cut(s) 616
Cfr13I GGNCC 7 cut(s) 68, 378, 536, 1116, 1213, 1843, 1867
CseI GACGC 1 cut(s) 455
Csp6I GTAC 6 cut(s) 1016, 1030, 1467, 1477, 1503, 2261
CviQI GTAC 6 cut(s) 1016, 1030, 1467, 1477, 1503, 2261
DdeI CTNAG 9 cut(s) 173, 842, 911, 954, 1388, 1938, 2043, 2160, 2257
DraIII CACNNNGTG 1 cut(s) 1577
EaeI YGGCCR 1 cut(s) 758
Eam1104I CTCTTC 5 cut(s) 264, 429, 1453, 1656, 2015
EarI CTCTTC 5 cut(s) 264, 429, 1453, 1656, 2015
EciI GGCGGA 1 cut(s) 2162
Ecl136II GAGCTC 1 cut(s) 703
Eco130I CCWWGG 4 cut(s) 761, 1033, 1887, 1920
Eco147I AGGCCT 2 cut(s) 133, 952
Eco24I GRGCYC 2 cut(s) 705, 1278
Eco32I GATATC 1 cut(s) 1993
Eco47I GGWCC 5 cut(s) 68, 1116, 1213, 1843, 1867
Eco53kI GAGCTC 1 cut(s) 703
Eco57I CTGAAG 2 cut(s) 353, 2099
Eco91I GGTNACC 2 cut(s) 142, 167
EcoICRI GAGCTC 1 cut(s) 703
EcoO109I RGGNCCY 3 cut(s) 536, 1213, 1867
EcoO65I GGTNACC 2 cut(s) 142, 167
EcoRI GAATTC 3 cut(s) 160, 641, 823
EcoRII CCWGG 2 cut(s) 137, 2241
EcoRV GATATC 1 cut(s) 1993
EcoT14I CCWWGG 4 cut(s) 761, 1033, 1887, 1920
EcoT38I GRGCYC 2 cut(s) 705, 1278
ErhI CCWWGG 4 cut(s) 761, 1033, 1887, 1920
FalI AAGNNNNNCTT 3 cut(s) 35, 1328, 1360
FaqI GGGAC 1 cut(s) 103
FbaI TGATCA 1 cut(s) 1315
FblI GTMKAC 1 cut(s) 753
Fnu4HI GCNGC 7 cut(s) 450, 732, 891, 1241, 1364, 2009, 2136
FokI GGATG 2 cut(s) 17, 1904
FriOI GRGCYC 2 cut(s) 705, 1278
Fsp4HI GCNGC 7 cut(s) 450, 732, 891, 1241, 1364, 2009, 2136
FspBI CTAG 1 cut(s) 401
GlaI GCGC 4 cut(s) 36, 730, 1008, 1556
GluI GCNGC 7 cut(s) 450, 732, 891, 1241, 1364, 2009, 2136
GsaI CCCAGC 1 cut(s) 317
HaeII RGCGCY 2 cut(s) 38, 1558
HaeIII GGCC 7 cut(s) 133, 380, 538, 760, 952, 971, 2112
HapII CCGG 1 cut(s) 617
HgaI GACGC 1 cut(s) 455
HhaI GCGC 4 cut(s) 37, 731, 1009, 1557
Hin6I GCGC 4 cut(s) 35, 729, 1007, 1555
HinP1I GCGC 4 cut(s) 35, 729, 1007, 1555
HindIII AAGCTT 1 cut(s) 2117
HinfI GANTC 6 cut(s) 177, 1261, 1934, 1985, 2084, 2222
HpaII CCGG 1 cut(s) 617
HphI GGTGA 7 cut(s) 161, 290, 365, 548, 824, 1055, 1712
Hpy166II GTNNAC 6 cut(s) 754, 1030, 1467, 1703, 1843, 2250
Hpy188I TCNGA 9 cut(s) 28, 837, 1287, 1320, 1739, 1990, 2019, 2032, 2211
Hpy8I GTNNAC 6 cut(s) 754, 1030, 1467, 1703, 1843, 2250
Hpy99I CGWCG 1 cut(s) 1589
HpyAV CCTTC 4 cut(s) 250, 329, 1546, 2074
HpyCH4IV ACGT 2 cut(s) 248, 1621
HpyF10VI GCNNNNNNNGC 6 cut(s) 43, 535, 899, 1246, 1976, 2144
HpyF3I CTNAG 9 cut(s) 173, 842, 911, 954, 1388, 1938, 2043, 2160, 2257
HpySE526I ACGT 2 cut(s) 248, 1621
HspAI GCGC 4 cut(s) 35, 729, 1007, 1555
Ksp22I TGATCA 1 cut(s) 1315
LguI GCTCTTC 1 cut(s) 1453
LmnI GCTCC 3 cut(s) 29, 803, 1711
Lsp1109I GCAGC 7 cut(s) 461, 718, 877, 1227, 1375, 2020, 2122
LweI GCATC 5 cut(s) 229, 588, 999, 1098, 1144
MaeI CTAG 1 cut(s) 401
MaeII ACGT 2 cut(s) 248, 1621
MaeIII GTNAC 7 cut(s) 87, 142, 167, 278, 469, 1569, 1810
MflI RGATCY 4 cut(s) 55, 661, 1381, 1949
MhlI GDGCHC 6 cut(s) 232, 705, 1278, 1396, 1632, 2252
MlsI TGGCCA 1 cut(s) 760
MluNI TGGCCA 1 cut(s) 760
MlyI GAGTC 2 cut(s) 1270, 1943
MmeI TCCRAC 3 cut(s) 277, 957, 2172
Mox20I TGGCCA 1 cut(s) 760
MroXI GAANNNNTTC 1 cut(s) 645
MscI TGGCCA 1 cut(s) 760
MseI TTAA 5 cut(s) 542, 1085, 1770, 1853, 2166
MslI CAYNNNNRTG 4 cut(s) 237, 251, 564, 1223
Msp20I TGGCCA 1 cut(s) 760
MspA1I CMGCKG 1 cut(s) 452
MspI CCGG 1 cut(s) 617
MspR9I CCNGG 2 cut(s) 139, 2243
Mva1269I GAATGC 4 cut(s) 333, 396, 518, 893
MvaI CCWGG 2 cut(s) 139, 2243
MvnI CGCG 1 cut(s) 902
MwoI GCNNNNNNNGC 6 cut(s) 43, 535, 899, 1246, 1976, 2144
NcoI CCATGG 3 cut(s) 761, 1033, 1887
NlaIV GGNNCC 3 cut(s) 537, 805, 834
NmuCI GTSAC 3 cut(s) 167, 278, 1569
NspI RCATGY 2 cut(s) 1756, 2102
PagI TCATGA 1 cut(s) 1539
PaqCI CACCTGC 1 cut(s) 1473
PceI AGGCCT 2 cut(s) 133, 952
PciSI GCTCTTC 1 cut(s) 1453
PctI GAATGC 4 cut(s) 333, 396, 518, 893
PdmI GAANNNNTTC 1 cut(s) 645
PfeI GAWTC 4 cut(s) 177, 1985, 2084, 2222
PflFI GACNNNGTC 1 cut(s) 200
PflMI CCANNNNNTGG 1 cut(s) 1729
PkrI GCNGC 7 cut(s) 451, 733, 892, 1242, 1365, 2010, 2137
PleI GAGTC 2 cut(s) 1269, 1942
PpsI GAGTC 2 cut(s) 1269, 1942
PpuMI RGGWCCY 2 cut(s) 1213, 1867
PshAI GACNNNNGTC 1 cut(s) 66
PsiI TTATAA 1 cut(s) 738
Psp124BI GAGCTC 1 cut(s) 705
Psp5II RGGWCCY 2 cut(s) 1213, 1867
Psp6I CCWGG 2 cut(s) 137, 2241
PspEI GGTNACC 2 cut(s) 142, 167
PspFI CCCAGC 1 cut(s) 313
PspGI CCWGG 2 cut(s) 137, 2241
PspN4I GGNNCC 3 cut(s) 537, 805, 834
PspPI GGNCC 7 cut(s) 68, 378, 536, 1116, 1213, 1843, 1867
PspPPI RGGWCCY 2 cut(s) 1213, 1867
PstI CTGCAG 2 cut(s) 1237, 1484
PstNI CAGNNNCTG 2 cut(s) 473, 2215
PsuI RGATCY 4 cut(s) 55, 661, 1381, 1949
PsyI GACNNNGTC 1 cut(s) 200
PvuII CAGCTG 1 cut(s) 452
RsaI GTAC 6 cut(s) 1017, 1031, 1468, 1478, 1504, 2262
RsaNI GTAC 6 cut(s) 1016, 1030, 1467, 1477, 1503, 2261
RseI CAYNNNNRTG 4 cut(s) 237, 251, 564, 1223
SacI GAGCTC 1 cut(s) 705
SapI GCTCTTC 1 cut(s) 1453
SaqAI TTAA 5 cut(s) 542, 1085, 1770, 1853, 2166
SatI GCNGC 7 cut(s) 450, 732, 891, 1241, 1364, 2009, 2136
Sau96I GGNCC 7 cut(s) 68, 378, 536, 1116, 1213, 1843, 1867
ScaI AGTACT 1 cut(s) 1017
SchI GAGTC 2 cut(s) 1270, 1943
ScrFI CCNGG 2 cut(s) 139, 2243
SduI GDGCHC 6 cut(s) 232, 705, 1278, 1396, 1632, 2252
SfaNI GCATC 5 cut(s) 229, 588, 999, 1098, 1144
SfcI CTRYAG 3 cut(s) 1149, 1233, 1480
SinI GGWCC 5 cut(s) 68, 1116, 1213, 1843, 1867
SmiMI CAYNNNNRTG 4 cut(s) 237, 251, 564, 1223
SmlI CTYRAG 7 cut(s) 9, 122, 706, 1271, 1597, 1871, 1901
SmoI CTYRAG 7 cut(s) 9, 122, 706, 1271, 1597, 1871, 1901
SseBI AGGCCT 2 cut(s) 133, 952
SsiI CCGC 1 cut(s) 2147
SspMI CTAG 1 cut(s) 401
SstI GAGCTC 1 cut(s) 705
StuI AGGCCT 2 cut(s) 133, 952
StyD4I CCNGG 2 cut(s) 137, 2241
StyI CCWWGG 4 cut(s) 761, 1033, 1887, 1920
TaiI ACGT 2 cut(s) 251, 1624
TaqI TCGA 4 cut(s) 180, 771, 1759, 2220
TaqII GACCGA 1 cut(s) 91
TatI WGTACW 4 cut(s) 1015, 1466, 1502, 2260
TfiI GAWTC 4 cut(s) 177, 1985, 2084, 2222
Tru1I TTAA 5 cut(s) 542, 1085, 1770, 1853, 2166
Tru9I TTAA 5 cut(s) 542, 1085, 1770, 1853, 2166
TscAI CASTG 6 cut(s) 120, 154, 1242, 1251, 1469, 1686
TseFI GTSAC 3 cut(s) 167, 278, 1569
TseI GCWGC 7 cut(s) 449, 731, 890, 1240, 1363, 2008, 2135
Tsp45I GTSAC 3 cut(s) 167, 278, 1569
TspDTI ATGAA 6 cut(s) 269, 282, 311, 634, 1528, 1632
TspGWI ACGGA 3 cut(s) 425, 477, 1997
TspRI CASTG 6 cut(s) 120, 154, 1242, 1251, 1469, 1686
Tth111I GACNNNGTC 1 cut(s) 200
Van91I CCANNNNNTGG 1 cut(s) 1729
VneI GTGCAC 1 cut(s) 2248
VpaK11BI GGWCC 5 cut(s) 68, 1116, 1213, 1843, 1867
XapI RAATTY 5 cut(s) 160, 428, 641, 823, 1605
XbaI TCTAGA 1 cut(s) 400
XceI RCATGY 2 cut(s) 1756, 2102
XmiI GTMKAC 1 cut(s) 753
XmnI GAANNNNTTC 1 cut(s) 645
XspI CTAG 1 cut(s) 401
ZrmI AGTACT 1 cut(s) 1017
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.