Rh5AG223400

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000253
Physical Location & Seq
Forward (+)
26520559 .. 26536143
15585 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG223400.1

Sequence Viewer

Length: 1848 bp
ATGTGTTCCGGAGCATTTTTTTACGAAATCAAAGCTTGGGCTCAAGTCAGACCAGGTGATAGTAGTCACAGCATTCTAAAGGTGGCTGTGAGAAGAGCAACTATAGTGCAGCCAAGTATCAGAACTCCGGGATTCAAACTCAAGGGTGCAGGGAGGAGTTATATGTGGTGTTTAAGTGGAATTGACAGAGTTCCTGTTATCATTTTTATATTGAACCACGACCCTATGGTAATGGATGCTGCTGGACATATTTGTAAAGAACGAGCTCTTAACTCGAGCAGGAAAGTACTTGCCCGAGGTATGGAATATAAGAGATCCTCATTTTTGAAGTTAATTCCAGTCAAAATTGCCCCCACCAGTAGAGTTACTTGGGTTGTTGAGACACGAGTGCATTCCGGGTACTTGACCTTTGATCAAAATTCTGAAGATCAAGTCATCAGGACTTGCCGGACTTATGGGGCACTTTTTGAAGTTCATACATTGGAGAAAGTTAACAATGATCCAGATGATTGCTCATTTATACCACTTGAAACTTTTTACCCTGCTCTTCACCGGATGCTTGTGGAAAAACGAGATTGGAAATCTCACCTTGAATTTCGGGGCCGCGCATCTTTTGAAATTGGAGTAATGGAATGGACAGAGACTATAATGAATGAATTCAAAAGTACTTTGGGAAAAGCAGACATTTATGGTGCCGTTGCTATATCCCGCTTCCCTTACCATTACTCTCCAAACTCATGGAGGGCATTCATTGAGCTGTGGGGGCCTTTAACAAACACCCTTCATCATGGGAATGGGGAAATGGGAATAACCCTGCGCTACTTGAAACTTATTGGAGGATTACCGATTTTGGGTATTCAGTATGAGGAATTTATTCCTGTCAATAAAGAGCTATCTGATGGTGAACAATTTCCATCTACCATTAATGATCTTCTATGCATCCATTCTGAGCTATGTTCTTTTCATAAGAGGGATTTTGTTTATTGGGATCAATGGCTCAATTATTTTTATCGGGGGCAACTTCTGTATGCTGCTTATGGCGAAAATCGCAAACGAGCACCTTATCCTGGAAAGATTGCTCGTAGACTACCAACCTCAAAATTTTCAAGGGAAGGAAAGCTAGCTGCCTTTCTAAGATGTAAGCCGAAGGCTCAGTTTGGGGAGTCTTTACCCATTGGAGGGACCTCTGAAAATGCTGGGTTGGGTAATCATCAAAAGACATCCCGACAACGAAGGAAGAATCATAAAATTAGTGAAAGCACGAATTTAGAGGCTTACACAGAGCTGCCTTCTGATAGGGATGCAGATAGAGATTACAAACGGAGTCGTTATGAAGAGTGCAACAACCTTGGAGACGATATGGATGATAACCTTGGAGGCGATATGGCTGATGGTCACTTTTCTCCAAGGGATGATGGTATTGCCTTCCATATTAGTGATGAAATCATTATCCCGAAGCTAAAATTAGTAGTAGTACGAGCTTCAGCATCGAATGATCTAGATCTTGAGCCCCATCCAAATGACTTGGAGGCGAGGACAAGGGAATCAGTGGAAAAGGAATGCGATATAGAGCCATTATCAGATGCTCCAGTTCTAGAGACAAAGGATGAAGTCTCAAAAACACTTGATGTGTTGGAGCTGATGTTCAAGACCCTCGGCCCTGGAAAGGACAAATTTGACTCATTTGAGTGGTTTGCTGCAAAAGTTTATCTAACCTTTGACTTGGCAGCTCAGCTTTCTCAAGACATGAGCATTATTGAGAAAGATTATTTATTGGACATTGAGCGCATCAATGAGTTAATTCAAAATAATAAAAAGTGTCAAGCTGCCAAGAAAGTCCTTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

615

Amino Acids

70.2

Weight (kDa)

6.52

Isoelectric Point (pI)

38.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000253)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28912 FvH4_3g31370 FvH4_3g31371 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_6g28991 FvH4_7g16740 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610
malus_domestica MD10G1126100.v1.1 MD10G1312700.v1.1
rosa_chinensis RchiOBHm_Chr6g0276621
rosa_laevigata RLG00000023327 RLG00000023328
rosa_multiflora Rmu_co8195922.1_g000001 Rmu_co8303105.1_g000001 Rmu_co8385689.1_g000001 Rmu_sc0000385.1_g000010 Rmu_sc0000594.1_g000002 Rmu_sc0000857.1_g000010 Rmu_sc0001016.1_g000053 Rmu_sc0001468.1_g000028 Rmu_sc0001548.1_g000047 Rmu_sc0001548.1_g000048 Rmu_sc0002281.1_g000026 Rmu_sc0002281.1_g000027 Rmu_sc0002281.1_g000028 Rmu_sc0002478.1_g000001 Rmu_sc0002513.1_g000014 Rmu_sc0002662.1_g000017 Rmu_sc0003936.1_g000040 Rmu_sc0004084.1_g000047 Rmu_sc0005529.1_g000005 Rmu_sc0005529.1_g000006 Rmu_sc0005728.1_g000010 Rmu_sc0005747.1_g000017 Rmu_sc0005747.1_g000018 Rmu_sc0006385.1_g000001 Rmu_sc0006550.1_g000019 Rmu_sc0006803.1_g000033 Rmu_sc0007102.1_g000011 Rmu_sc0011018.1_g000001 Rmu_sc0011452.1_g000014 Rmu_sc0011805.1_g000001 Rmu_sc0011805.1_g000002 Rmu_sc0012566.1_g000001 Rmu_sc0013807.1_g000007 Rmu_sc0015817.1_g000001 Rmu_sc0015930.1_g000011 Rmu_sc0018873.1_g000003 Rmu_sc0020929.1_g000001
rosa_roxburghii Rroxscaffold_2G00081310 Rroxscaffold_2G00111790 Rroxscaffold_5G00349530 Rroxscaffold_5G00356270 Rroxscaffold_5G00356280 Rroxscaffold_5G00356290
rosa_rugosa Rorug01G0056400 Rorug01G0056500 Rorug02G0247000 Rorug03G0271700 Rorug04G0157900 Rorug05G0221700 Rorug05G0251400 Rorug05G0251400 Rorug06G0087300 Rorug07G0221900 Rorug07G0221900
rosa_samantha Rh1AG073200 Rh1AG073300 Rh1AG124600 Rh1AG124700 Rh1BG091900 Rh1CG031600 Rh1CG072100 Rh1CG072200 Rh1CG118800 Rh1CG276600 Rh1CG276700 Rh1DG077300 Rh2BG192000 Rh2BG330900 Rh2BG331000 Rh2BG517700 Rh2BG517800 Rh2CG188300 Rh2DG120800 Rh2DG323900 Rh2DG420700 Rh2DG433000 Rh2DG529400 Rh2DG529500 Rh3DG358100 Rh3DG358200 Rh4BG129700 Rh4BG129800 Rh4BG129900 Rh4BG166400 Rh4CG032000 Rh4DG024800 Rh4DG039500 Rh5AG223400 Rh5BG244500 Rh5BG244600 Rh5BG244700 Rh5CG363000 Rh5CG366900 Rh6AG117500 Rh6AG188600 Rh6AG188700 Rh6AG188800 Rh6BG111400 Rh6BG140800 Rh6BG178800 Rh6DG124100 Rh6DG210000 Rh7AG441200 Rh7BG296800 Rh7BG413900 Rh7BG414000 Rh7BG452400 Rh7DG234000 Rh7DG234100
rosa_wichuraiana Rw2G019410 Rw5G042140 Rw7G019590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 692
AccI GTMKAC 1 cut(s) 1084
AccII CGCG 1 cut(s) 606
AccIII TCCGGA 1 cut(s) 8
AciI CCGC 2 cut(s) 604, 709
AclWI GGATC 3 cut(s) 309, 494, 996
AcsI RAATTY 7 cut(s) 418, 593, 656, 869, 1100, 1264, 1673
AcuI CTGAAG 2 cut(s) 444, 1467
AfaI GTAC 4 cut(s) 288, 401, 667, 1476
AfiI CCNNNNNNNGG 6 cut(s) 301, 851, 1067, 1178, 1179, 1666
AjnI CCWGG 3 cut(s) 52, 1066, 1660
AloI GAACNNNNNNTCC 2 cut(s) 1628, 1660
Alw21I GWGCWC 2 cut(s) 268, 1060
Alw26I GTCTC 5 cut(s) 374, 635, 1347, 1592, 1618
AlwI GGATC 3 cut(s) 309, 494, 996
Ama87I CYCGRG 2 cut(s) 274, 294
Aor13HI TCCGGA 1 cut(s) 8
AoxI GGCC 3 cut(s) 601, 764, 1657
ApeKI GCWGC 8 cut(s) 109, 239, 1031, 1124, 1285, 1697, 1727, 1826
ApoI RAATTY 7 cut(s) 418, 593, 656, 869, 1100, 1264, 1673
AseI ATTAAT 1 cut(s) 924
Asp700I GAANNNNTTC 3 cut(s) 656, 873, 909
AspLEI GCGC 3 cut(s) 608, 819, 1788
AspS9I GGNCC 4 cut(s) 601, 764, 1182, 1658
AsuC2I CCSGG 2 cut(s) 129, 397
AsuHPI GGTGA 4 cut(s) 68, 542, 578, 914
AsuNHI GCTAGC 1 cut(s) 1120
AvaI CYCGRG 2 cut(s) 274, 294
AvaII GGWCC 1 cut(s) 1182
BaeGI GKGCMC 1 cut(s) 463
BanI GGYRCC 1 cut(s) 692
BanII GRGCYC 3 cut(s) 43, 268, 1512
BauI CACGAG 1 cut(s) 384
Bbv12I GWGCWC 2 cut(s) 268, 1060
BbvI GCAGC 8 cut(s) 121, 226, 1018, 1111, 1272, 1684, 1739, 1813
BccI CCATC 5 cut(s) 893, 922, 1385, 1409, 1521
BceAI ACGGC 1 cut(s) 680
BciT130I CCWGG 3 cut(s) 54, 1068, 1662
BclI TGATCA 1 cut(s) 412
BcnI CCSGG 2 cut(s) 129, 397
BcoDI GTCTC 5 cut(s) 374, 635, 1347, 1592, 1618
BfaI CTAG 3 cut(s) 1121, 1499, 1595
BfmI CTRYAG 1 cut(s) 102
BglII AGATCT 1 cut(s) 1501
BisI GCNGC 9 cut(s) 110, 240, 604, 1032, 1125, 1286, 1698, 1728, 1827
BlpI GCTNAGC 1 cut(s) 1731
BlsI GCNGC 9 cut(s) 111, 241, 605, 1033, 1126, 1287, 1699, 1729, 1828
BmcAI AGTACT 2 cut(s) 288, 667
Bme1390I CCNGG 5 cut(s) 54, 129, 397, 1068, 1662
Bme18I GGWCC 1 cut(s) 1182
BmeT110I CYCGRG 2 cut(s) 274, 294
BmgT120I GGNCC 4 cut(s) 601, 764, 1182, 1658
BmiI GGNNCC 4 cut(s) 602, 694, 765, 1183
BmrFI CCNGG 5 cut(s) 54, 129, 397, 1068, 1662
BmsI GCATC 8 cut(s) 226, 546, 617, 948, 1291, 1496, 1573, 1797
BmtI GCTAGC 1 cut(s) 1124
BpmI CTGGAG 1 cut(s) 1572
Bpu1102I GCTNAGC 1 cut(s) 1731
BpuEI CTTGAG 4 cut(s) 27, 125, 1526, 1725
BpuMI CCSGG 2 cut(s) 129, 397
BsaBI GATNNNNATC 1 cut(s) 1500
BsaJI CCNNGG 6 cut(s) 295, 1348, 1372, 1406, 1654, 1660
BsaWI WCCGGW 2 cut(s) 8, 552
BsaXI ACNNNNNCTCC 2 cut(s) 1628, 1658
Bsc4I CCNNNNNNNGG 6 cut(s) 301, 851, 1067, 1178, 1179, 1666
Bse1I ACTGG 3 cut(s) 338, 357, 1589
Bse8I GATNNNNATC 1 cut(s) 1500
BseAI TCCGGA 1 cut(s) 8
BseBI CCWGG 3 cut(s) 54, 1068, 1662
BseDI CCNNGG 6 cut(s) 295, 1348, 1372, 1406, 1654, 1660
BseGI GGATG 9 cut(s) 241, 561, 939, 1220, 1306, 1369, 1417, 1513, 1612
BseJI GATNNNNATC 1 cut(s) 1500
BseLI CCNNNNNNNGG 6 cut(s) 301, 851, 1067, 1178, 1179, 1666
BseMII CTCAG 3 cut(s) 939, 1166, 1745
BseNI ACTGG 3 cut(s) 338, 357, 1589
BseRI GAGGAG 1 cut(s) 169
BseSI GKGCMC 1 cut(s) 463
BseXI GCAGC 8 cut(s) 121, 226, 1018, 1111, 1272, 1684, 1739, 1813
BseYI CCCAGC 1 cut(s) 1196
BsgI GTGCAG 2 cut(s) 128, 168
Bsh1236I CGCG 1 cut(s) 606
BshFI GGCC 3 cut(s) 603, 766, 1659
BshNI GGYRCC 1 cut(s) 692
BsiHKAI GWGCWC 2 cut(s) 268, 1060
BsiHKCI CYCGRG 2 cut(s) 274, 294
BsiSI CCGG 5 cut(s) 9, 128, 396, 448, 553
BslFI GGGAC 1 cut(s) 1195
BslI CCNNNNNNNGG 6 cut(s) 301, 851, 1067, 1178, 1179, 1666
BsmAI GTCTC 5 cut(s) 374, 635, 1347, 1592, 1618
BsmBI CGTCTC 1 cut(s) 1347
BsmFI GGGAC 1 cut(s) 1195
BsmI GAATGC 4 cut(s) 72, 391, 746, 1565
BsnI GGCC 3 cut(s) 603, 766, 1659
BsoBI CYCGRG 2 cut(s) 274, 294
Bsp1286I GDGCHC 5 cut(s) 43, 268, 463, 1060, 1512
Bsp13I TCCGGA 1 cut(s) 8
Bsp143I GATC 8 cut(s) 314, 412, 427, 499, 928, 988, 1495, 1501
Bsp1720I GCTNAGC 1 cut(s) 1731
BspACI CCGC 2 cut(s) 604, 709
BspANI GGCC 3 cut(s) 603, 766, 1659
BspCNI CTCAG 3 cut(s) 940, 1165, 1744
BspEI TCCGGA 1 cut(s) 8
BspFNI CGCG 1 cut(s) 606
BspLI GGNNCC 4 cut(s) 602, 694, 765, 1183
BspOI GCTAGC 1 cut(s) 1124
BspPI GGATC 3 cut(s) 309, 494, 996
BspQI GCTCTTC 2 cut(s) 88, 552
BspT107I GGYRCC 1 cut(s) 692
BsrI ACTGG 3 cut(s) 338, 357, 1589
BssECI CCNNGG 6 cut(s) 295, 1348, 1372, 1406, 1654, 1660
BssMI GATC 8 cut(s) 314, 412, 427, 499, 928, 988, 1495, 1501
BssSI CACGAG 1 cut(s) 384
BssT1I CCWWGG 3 cut(s) 1348, 1372, 1406
Bst2BI CACGAG 1 cut(s) 384
Bst2UI CCWGG 3 cut(s) 54, 1068, 1662
Bst6I CTCTTC 3 cut(s) 88, 552, 1329
BstC8I GCNNGC 1 cut(s) 1122
BstDEI CTNAG 4 cut(s) 948, 1133, 1152, 1731
BstF5I GGATG 9 cut(s) 241, 561, 939, 1220, 1306, 1369, 1417, 1513, 1612
BstFNI CGCG 1 cut(s) 606
BstHHI GCGC 3 cut(s) 608, 819, 1788
BstKTI GATC 8 cut(s) 317, 415, 430, 502, 931, 991, 1498, 1504
BstMAI GTCTC 5 cut(s) 374, 635, 1347, 1592, 1618
BstMBI GATC 8 cut(s) 314, 412, 427, 499, 928, 988, 1495, 1501
BstMWI GCNNNNNNNGC 2 cut(s) 763, 1047
BstNI CCWGG 3 cut(s) 54, 1068, 1662
BstSCI CCNGG 5 cut(s) 52, 127, 395, 1066, 1660
BstSFI CTRYAG 1 cut(s) 102
BstSLI GKGCMC 1 cut(s) 463
BstUI CGCG 1 cut(s) 606
BstV1I GCAGC 8 cut(s) 121, 226, 1018, 1111, 1272, 1684, 1739, 1813
BstX2I RGATCY 2 cut(s) 314, 1501
BstXI CCANNNNNNTGG 1 cut(s) 738
BstYI RGATCY 2 cut(s) 314, 1501
BsuRI GGCC 3 cut(s) 603, 766, 1659
BtsCI GGATG 9 cut(s) 241, 561, 939, 1220, 1306, 1369, 1417, 1513, 1612
BtsIMutI CAGTG 1 cut(s) 1554
Cac8I GCNNGC 1 cut(s) 1122
CfoI GCGC 3 cut(s) 608, 819, 1788
Cfr13I GGNCC 4 cut(s) 601, 764, 1182, 1658
CsiI ACCWGGT 1 cut(s) 52
Csp6I GTAC 4 cut(s) 287, 400, 666, 1475
CviAII CATG 3 cut(s) 738, 788, 1747
CviQI GTAC 4 cut(s) 287, 400, 666, 1475
DdeI CTNAG 4 cut(s) 948, 1133, 1152, 1731
DpnI GATC 8 cut(s) 316, 414, 429, 501, 930, 990, 1497, 1503
DpnII GATC 8 cut(s) 314, 412, 427, 499, 928, 988, 1495, 1501
Eam1104I CTCTTC 3 cut(s) 88, 552, 1329
EarI CTCTTC 3 cut(s) 88, 552, 1329
Ecl136II GAGCTC 1 cut(s) 266
Eco130I CCWWGG 3 cut(s) 1348, 1372, 1406
Eco24I GRGCYC 3 cut(s) 43, 268, 1512
Eco47I GGWCC 1 cut(s) 1182
Eco53kI GAGCTC 1 cut(s) 266
Eco57I CTGAAG 2 cut(s) 444, 1467
Eco88I CYCGRG 2 cut(s) 274, 294
EcoICRI GAGCTC 1 cut(s) 266
EcoO109I RGGNCCY 2 cut(s) 764, 1182
EcoRI GAATTC 1 cut(s) 656
EcoRII CCWGG 3 cut(s) 52, 1066, 1660
EcoT14I CCWWGG 3 cut(s) 1348, 1372, 1406
EcoT22I ATGCAT 1 cut(s) 941
EcoT38I GRGCYC 3 cut(s) 43, 268, 1512
ErhI CCWWGG 3 cut(s) 1348, 1372, 1406
Esp3I CGTCTC 1 cut(s) 1347
FaeI CATG 3 cut(s) 741, 791, 1750
FaqI GGGAC 1 cut(s) 1195
FatI CATG 3 cut(s) 737, 787, 1746
FauI CCCGC 1 cut(s) 716
FbaI TGATCA 1 cut(s) 412
FblI GTMKAC 1 cut(s) 1084
Fnu4HI GCNGC 9 cut(s) 110, 240, 604, 1032, 1125, 1286, 1698, 1728, 1827
FokI GGATG 9 cut(s) 248, 568, 926, 1207, 1313, 1376, 1424, 1500, 1619
FriOI GRGCYC 3 cut(s) 43, 268, 1512
Fsp4HI GCNGC 9 cut(s) 110, 240, 604, 1032, 1125, 1286, 1698, 1728, 1827
FspBI CTAG 3 cut(s) 1121, 1499, 1595
GlaI GCGC 3 cut(s) 607, 818, 1787
GluI GCNGC 9 cut(s) 110, 240, 604, 1032, 1125, 1286, 1698, 1728, 1827
GsaI CCCAGC 1 cut(s) 1200
GsuI CTGGAG 1 cut(s) 1572
HaeIII GGCC 3 cut(s) 603, 766, 1659
HapII CCGG 5 cut(s) 9, 128, 396, 448, 553
HhaI GCGC 3 cut(s) 608, 819, 1788
Hin1II CATG 3 cut(s) 741, 791, 1750
Hin6I GCGC 3 cut(s) 606, 817, 1786
HinP1I GCGC 3 cut(s) 606, 817, 1786
HincII GTYRAC 1 cut(s) 493
HindII GTYRAC 1 cut(s) 493
HindIII AAGCTT 1 cut(s) 33
HinfI GANTC 6 cut(s) 132, 1163, 1240, 1324, 1544, 1679
HpaI GTTAAC 1 cut(s) 493
HpaII CCGG 5 cut(s) 9, 128, 396, 448, 553
HphI GGTGA 4 cut(s) 68, 542, 578, 914
Hpy166II GTNNAC 3 cut(s) 493, 905, 1085
Hpy188I TCNGA 8 cut(s) 50, 122, 424, 898, 949, 1189, 1294, 1582
Hpy8I GTNNAC 3 cut(s) 493, 905, 1085
HpyAV CCTTC 6 cut(s) 791, 1106, 1141, 1227, 1299, 1435
HpyCH4V TGCA 7 cut(s) 109, 149, 391, 939, 1304, 1341, 1700
HpyF10VI GCNNNNNNNGC 2 cut(s) 763, 1047
HpyF3I CTNAG 4 cut(s) 948, 1133, 1152, 1731
Hsp92II CATG 3 cut(s) 741, 791, 1750
HspAI GCGC 3 cut(s) 606, 817, 1786
Kpn2I TCCGGA 1 cut(s) 8
Ksp22I TGATCA 1 cut(s) 412
KspAI GTTAAC 1 cut(s) 493
Kzo9I GATC 8 cut(s) 314, 412, 427, 499, 928, 988, 1495, 1501
LguI GCTCTTC 2 cut(s) 88, 552
LmnI GCTCC 3 cut(s) 11, 1591, 1636
Lsp1109I GCAGC 8 cut(s) 121, 226, 1018, 1111, 1272, 1684, 1739, 1813
LweI GCATC 8 cut(s) 226, 546, 617, 948, 1291, 1496, 1573, 1797
MabI ACCWGGT 1 cut(s) 52
MaeI CTAG 3 cut(s) 1121, 1499, 1595
MaeIII GTNAC 3 cut(s) 65, 364, 1394
MalI GATC 8 cut(s) 316, 414, 429, 501, 930, 990, 1497, 1503
MboI GATC 8 cut(s) 314, 412, 427, 499, 928, 988, 1495, 1501
MboII GAAGA 6 cut(s) 105, 437, 539, 923, 1249, 1346
MflI RGATCY 2 cut(s) 314, 1501
MhlI GDGCHC 5 cut(s) 43, 268, 463, 1060, 1512
MlyI GAGTC 3 cut(s) 1172, 1333, 1673
MmeI TCCRAC 1 cut(s) 1614
Mph1103I ATGCAT 1 cut(s) 941
MroI TCCGGA 1 cut(s) 8
MroXI GAANNNNTTC 3 cut(s) 656, 873, 909
MseI TTAA 7 cut(s) 173, 270, 332, 492, 770, 924, 1799
MslI CAYNNNNRTG 4 cut(s) 792, 1434, 1518, 1687
MspI CCGG 5 cut(s) 9, 128, 396, 448, 553
MspR9I CCNGG 5 cut(s) 54, 129, 397, 1068, 1662
Mva1269I GAATGC 4 cut(s) 72, 391, 746, 1565
MvaI CCWGG 3 cut(s) 54, 1068, 1662
MvnI CGCG 1 cut(s) 606
MwoI GCNNNNNNNGC 2 cut(s) 763, 1047
NciI CCSGG 2 cut(s) 129, 397
NdeII GATC 8 cut(s) 314, 412, 427, 499, 928, 988, 1495, 1501
NheI GCTAGC 1 cut(s) 1120
NlaIII CATG 3 cut(s) 741, 791, 1750
NlaIV GGNNCC 4 cut(s) 602, 694, 765, 1183
NmeAIII GCCGAG 1 cut(s) 1635
NmuCI GTSAC 2 cut(s) 65, 1394
NsiI ATGCAT 1 cut(s) 941
PaeR7I CTCGAG 1 cut(s) 274
PciSI GCTCTTC 2 cut(s) 88, 552
PctI GAATGC 4 cut(s) 72, 391, 746, 1565
PdmI GAANNNNTTC 3 cut(s) 656, 873, 909
PfeI GAWTC 3 cut(s) 132, 1240, 1544
PfoI TCCNGGA 2 cut(s) 127, 1066
PkrI GCNGC 9 cut(s) 111, 241, 605, 1033, 1126, 1287, 1699, 1729, 1828
PleI GAGTC 3 cut(s) 1171, 1332, 1673
PpsI GAGTC 3 cut(s) 1171, 1332, 1673
PpuMI RGGWCCY 1 cut(s) 1182
PshBI ATTAAT 1 cut(s) 924
Psp124BI GAGCTC 1 cut(s) 268
Psp5II RGGWCCY 1 cut(s) 1182
Psp6I CCWGG 3 cut(s) 52, 1066, 1660
PspFI CCCAGC 1 cut(s) 1196
PspGI CCWGG 3 cut(s) 52, 1066, 1660
PspN4I GGNNCC 4 cut(s) 602, 694, 765, 1183
PspPI GGNCC 4 cut(s) 601, 764, 1182, 1658
PspPPI RGGWCCY 1 cut(s) 1182
PspXI VCTCGAGB 1 cut(s) 274
PsuI RGATCY 2 cut(s) 314, 1501
RsaI GTAC 4 cut(s) 288, 401, 667, 1476
RsaNI GTAC 4 cut(s) 287, 400, 666, 1475
RseI CAYNNNNRTG 4 cut(s) 792, 1434, 1518, 1687
SacI GAGCTC 1 cut(s) 268
SapI GCTCTTC 2 cut(s) 88, 552
SaqAI TTAA 7 cut(s) 173, 270, 332, 492, 770, 924, 1799
SatI GCNGC 9 cut(s) 110, 240, 604, 1032, 1125, 1286, 1698, 1728, 1827
Sau3AI GATC 8 cut(s) 314, 412, 427, 499, 928, 988, 1495, 1501
Sau96I GGNCC 4 cut(s) 601, 764, 1182, 1658
ScaI AGTACT 2 cut(s) 288, 667
SchI GAGTC 3 cut(s) 1172, 1333, 1673
ScrFI CCNGG 5 cut(s) 54, 129, 397, 1068, 1662
SduI GDGCHC 5 cut(s) 43, 268, 463, 1060, 1512
SexAI ACCWGGT 1 cut(s) 52
SfaNI GCATC 8 cut(s) 226, 546, 617, 948, 1291, 1496, 1573, 1797
SfcI CTRYAG 1 cut(s) 102
Sfr274I CTCGAG 1 cut(s) 274
SinI GGWCC 1 cut(s) 1182
SlaI CTCGAG 1 cut(s) 274
SmiMI CAYNNNNRTG 4 cut(s) 792, 1434, 1518, 1687
SmlI CTYRAG 5 cut(s) 42, 140, 274, 1505, 1740
SmoI CTYRAG 5 cut(s) 42, 140, 274, 1505, 1740
SsiI CCGC 2 cut(s) 604, 709
SspMI CTAG 3 cut(s) 1121, 1499, 1595
SstI GAGCTC 1 cut(s) 268
StyD4I CCNGG 5 cut(s) 52, 127, 395, 1066, 1660
StyI CCWWGG 3 cut(s) 1348, 1372, 1406
TaqI TCGA 2 cut(s) 275, 1490
TatI WGTACW 2 cut(s) 286, 665
TauI GCSGC 1 cut(s) 606
TfiI GAWTC 3 cut(s) 132, 1240, 1544
Tru1I TTAA 7 cut(s) 173, 270, 332, 492, 770, 924, 1799
Tru9I TTAA 7 cut(s) 173, 270, 332, 492, 770, 924, 1799
TscAI CASTG 1 cut(s) 1554
TseFI GTSAC 2 cut(s) 65, 1394
TseI GCWGC 8 cut(s) 109, 239, 1031, 1124, 1285, 1697, 1727, 1826
Tsp45I GTSAC 2 cut(s) 65, 1394
TspDTI ATGAA 9 cut(s) 464, 665, 669, 739, 773, 953, 1347, 1455, 1623
TspGWI ACGGA 1 cut(s) 1336
TspRI CASTG 1 cut(s) 1554
VpaK11BI GGWCC 1 cut(s) 1182
VspI ATTAAT 1 cut(s) 924
XapI RAATTY 7 cut(s) 418, 593, 656, 869, 1100, 1264, 1673
XbaI TCTAGA 2 cut(s) 1498, 1594
XhoI CTCGAG 1 cut(s) 274
XmiI GTMKAC 1 cut(s) 1084
XmnI GAANNNNTTC 3 cut(s) 656, 873, 909
XspI CTAG 3 cut(s) 1121, 1499, 1595
ZrmI AGTACT 2 cut(s) 288, 667
Zsp2I ATGCAT 1 cut(s) 941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.