Rmu_sc0000385.1_g000010

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000385.1
OG0000253
Physical Location & Seq
Reverse (-)
34648 .. 39599
4952 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000385.1_g000010.1.cds

Sequence Viewer

Length: 2283 bp
atgggtgtggatttctgttcgacttggagagggagtcttgttgttcggctttatacaaaaggggaatctattgcctcggtcatgcactcttcaccgaagattagtgggttgttggaagcactccaagagaacatcaggggtaaattcttttctccagacaccaattttacgttttgtgtggttgatgttctagctgcagagcttcgccttcctcttgatgtgtttttctccgtccccttaactctggtaattgatgcacatggacatatatgtactaaacgatcacttaacaagagcgggcaggaagccatagagggtccagagtacaggcggtcttcaccattgcgttctgtacaagttgatgccttagtgaaagacaaaattacatgggtcagcgaagtgcgagtgcattctgggtatctcacattcagtcatgattctgaagatcaagccataaagacatgtcgctcctactgtgctatatttccagcttgcacccttgagaaagttaataatgaagaggatggggattccttcattcaccaagagaacttttatcctgttctttataaaatgttgaaagacaaacaagactggggagttcatctctactttcgaggtcgtgctacctttgagcctagagtgatggaatggacagaatcaatattagatcatttcacggggaagctagaccaagcagaaatatatggtgccattggtgtttctcgcttcccctatcattattgtgggaacacatggagagcattctgtgaactttggagtcctttgactaacaccttacatcatgggaatggagagatgagtgtgtccctttatgacttgaagcttattagtggtcttcccattttgggtgtcccatatgaagaattcattcctgtgaataaagaattacgtcgtaatgggagatatccacatacccttgttgagcttctgcaaatacattctgtattgaatgcatccaatgacaagacttatgtttcctggaggcaatggcttgcttatttttatagggaacgcttgatatatgcagcatatggagagactacatactggggagatcgcatgcagcaaaatgtgttcatgggtaggaaaccagctctagacatttcaaaagaaggagaacttgctgcttttctagcattttggctcagtaggtttgttttaccttctcatgactctagaatcagacctgaaaccatttatatggcaggcttaatggcccagggggtcaaggtctctcttgcaccgtcagttttaggctatatttgtcatggccttggtgagtttgtgactgatccgagagggcctaaagagtctcaaggttgtctgcctgttcattacgtgatcagttggttaggagagcactttacttgtttgtatagacgccgagctgcaagtgacatacccgctcgtgaccctcatttggccaggtatgcatgtgttgatactgagaacttagatattaccattgctagccttgctgtcagaacgaacgaattgattctcaggtatgcaggtgttgacgctgagaacttagacattacctccgctagacttgctttcagaagtaatgaatccattgattatcgtccaagtccatacaatgaacagaaaggctgctttttgcttgatgacaaaagcttgtcagatgaacaatttaagtttctagtctgcatacgctctaccttgctaactgtgaggatgggtactgatctttggcaggaaccatactacccaaataggtttacacggcagtttggttttgaccagggagttccatcaaacaagctattatttgctgttgagaaaagaagacagtgttgcattgaagatttagcaaaagcgcaacatatactccttagagctaataccagtgccctatgtttgcaggcactcttcaatgtgtacgcgattgatgccagcgagaaagatacgcacctgaaggaagaggttagcaatctctccgggaaggtgcagtatctgcatggggagaaagccaagctggagaaggagcgggactccctgaaagagaagattaagtccttgactccgatggttaccgagcttgatgcggcgaagcgacaaattgcggagcttgaaggcgaaatgtctgaggcgagggatgaggtgaagagtgcccaggactctgaaaaggaagctgcagaatcagccaagtcctggaaggcgagggcagatcatctggaggagcgccttcccgtggagaggcgcgagcccgtggaggagtacaagggctctcaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

760

Amino Acids

86.71

Weight (kDa)

6.1

Isoelectric Point (pI)

48.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000253)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28912 FvH4_3g31370 FvH4_3g31371 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_4g10340 FvH4_6g28991 FvH4_7g16740 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610 FvH4_7g18610
malus_domestica MD10G1126100.v1.1 MD10G1312700.v1.1
rosa_chinensis RchiOBHm_Chr6g0276621
rosa_laevigata RLG00000023327 RLG00000023328
rosa_multiflora Rmu_co8195922.1_g000001 Rmu_co8303105.1_g000001 Rmu_co8385689.1_g000001 Rmu_sc0000385.1_g000010 Rmu_sc0000594.1_g000002 Rmu_sc0000857.1_g000010 Rmu_sc0001016.1_g000053 Rmu_sc0001468.1_g000028 Rmu_sc0001548.1_g000047 Rmu_sc0001548.1_g000048 Rmu_sc0002281.1_g000026 Rmu_sc0002281.1_g000027 Rmu_sc0002281.1_g000028 Rmu_sc0002478.1_g000001 Rmu_sc0002513.1_g000014 Rmu_sc0002662.1_g000017 Rmu_sc0003936.1_g000040 Rmu_sc0004084.1_g000047 Rmu_sc0005529.1_g000005 Rmu_sc0005529.1_g000006 Rmu_sc0005728.1_g000010 Rmu_sc0005747.1_g000017 Rmu_sc0005747.1_g000018 Rmu_sc0006385.1_g000001 Rmu_sc0006550.1_g000019 Rmu_sc0006803.1_g000033 Rmu_sc0007102.1_g000011 Rmu_sc0011018.1_g000001 Rmu_sc0011452.1_g000014 Rmu_sc0011805.1_g000001 Rmu_sc0011805.1_g000002 Rmu_sc0012566.1_g000001 Rmu_sc0013807.1_g000007 Rmu_sc0015817.1_g000001 Rmu_sc0015930.1_g000011 Rmu_sc0018873.1_g000003 Rmu_sc0020929.1_g000001
rosa_roxburghii Rroxscaffold_2G00081310 Rroxscaffold_2G00111790 Rroxscaffold_5G00349530 Rroxscaffold_5G00356270 Rroxscaffold_5G00356280 Rroxscaffold_5G00356290
rosa_rugosa Rorug01G0056400 Rorug01G0056500 Rorug02G0247000 Rorug03G0271700 Rorug04G0157900 Rorug05G0221700 Rorug05G0251400 Rorug05G0251400 Rorug06G0087300 Rorug07G0221900 Rorug07G0221900
rosa_samantha Rh1AG073200 Rh1AG073300 Rh1AG124600 Rh1AG124700 Rh1BG091900 Rh1CG031600 Rh1CG072100 Rh1CG072200 Rh1CG118800 Rh1CG276600 Rh1CG276700 Rh1DG077300 Rh2BG192000 Rh2BG330900 Rh2BG331000 Rh2BG517700 Rh2BG517800 Rh2CG188300 Rh2DG120800 Rh2DG323900 Rh2DG420700 Rh2DG433000 Rh2DG529400 Rh2DG529500 Rh3DG358100 Rh3DG358200 Rh4BG129700 Rh4BG129800 Rh4BG129900 Rh4BG166400 Rh4CG032000 Rh4DG024800 Rh4DG039500 Rh5AG223400 Rh5BG244500 Rh5BG244600 Rh5BG244700 Rh5CG363000 Rh5CG366900 Rh6AG117500 Rh6AG188600 Rh6AG188700 Rh6AG188800 Rh6BG111400 Rh6BG140800 Rh6BG178800 Rh6DG124100 Rh6DG210000 Rh7AG441200 Rh7BG296800 Rh7BG413900 Rh7BG414000 Rh7BG452400 Rh7DG234000 Rh7DG234100
rosa_wichuraiana Rw2G019410 Rw5G042140 Rw7G019590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 570
AarI CACCTGC 1 cut(s) 1526
Acc36I ACCTGC 1 cut(s) 1526
AccB1I GGYRCC 1 cut(s) 710
AccB7I CCANNNNNTGG 1 cut(s) 2199
AccBSI CCGCTC 3 cut(s) 297, 1430, 2035
AccII CGCG 2 cut(s) 1931, 2250
AciI CCGC 7 cut(s) 297, 331, 1428, 1569, 2035, 2093, 2111
AclWI GGATC 1 cut(s) 1310
AcoI YGGCCR 1 cut(s) 1446
AcsI RAATTY 2 cut(s) 143, 887
AcuI CTGAAG 2 cut(s) 462, 1982
AcyI GRCGYC 1 cut(s) 1405
AfaI GTAC 6 cut(s) 274, 326, 354, 1729, 1928, 2267
AfiI CCNNNNNNNGG 5 cut(s) 869, 1444, 2199, 2239, 2244
AflIII ACRYGT 1 cut(s) 461
AgsI TTSAA 7 cut(s) 580, 844, 973, 1131, 1850, 1921, 2120
AjnI CCWGG 6 cut(s) 1001, 1242, 1448, 1788, 2160, 2198
Alw21I GWGCWC 1 cut(s) 1386
Alw26I GTCTC 3 cut(s) 1055, 1261, 1341
AlwI GGATC 1 cut(s) 1310
AlwNI CAGNNNCTG 1 cut(s) 2002
AoxI GGCC 4 cut(s) 1239, 1294, 1325, 1446
ApeKI GCWGC 7 cut(s) 194, 1049, 1087, 1148, 1412, 1638, 2180
ApoI RAATTY 2 cut(s) 143, 887
Asp700I GAANNNNTTC 2 cut(s) 891, 1521
AspLEI GCGC 3 cut(s) 1867, 2232, 2250
AspS9I GGNCC 3 cut(s) 317, 1240, 1325
AsuC2I CCSGG 1 cut(s) 1987
AsuHPI GGTGA 5 cut(s) 84, 330, 533, 1313, 2161
AsuNHI GCTAGC 1 cut(s) 1493
AvaII GGWCC 1 cut(s) 317
BaeGI GKGCMC 2 cut(s) 1900, 2161
BalI TGGCCA 1 cut(s) 1448
BanI GGYRCC 1 cut(s) 710
BanII GRGCYC 2 cut(s) 2256, 2276
BauI CACGAG 1 cut(s) 1431
BbsI GAAGAC 3 cut(s) 327, 851, 1840
Bbv12I GWGCWC 1 cut(s) 1386
BbvI GCAGC 7 cut(s) 181, 1061, 1099, 1135, 1399, 1625, 2167
BccI CCATC 5 cut(s) 518, 640, 1717, 1807, 2068
BceAI ACGGC 1 cut(s) 1787
BcgI CGANNNNNNTGC 2 cut(s) 2072, 2106
BciT130I CCWGG 6 cut(s) 1003, 1244, 1450, 1790, 2162, 2200
BclI TGATCA 1 cut(s) 1365
BcnI CCSGG 1 cut(s) 1987
BcoDI GTCTC 3 cut(s) 1055, 1261, 1341
BfaI CTAG 9 cut(s) 191, 639, 689, 1121, 1157, 1200, 1494, 1572, 1688
BfmI CTRYAG 2 cut(s) 195, 2181
BfoI RGCGCY 1 cut(s) 2233
BfuAI ACCTGC 1 cut(s) 1526
BisI GCNGC 8 cut(s) 195, 1050, 1088, 1149, 1413, 1639, 2094, 2181
BlsI GCNGC 8 cut(s) 196, 1051, 1089, 1150, 1414, 1640, 2095, 2182
Bme1390I CCNGG 7 cut(s) 1003, 1244, 1450, 1790, 1987, 2162, 2200
Bme18I GGWCC 1 cut(s) 317
BmgT120I GGNCC 3 cut(s) 317, 1240, 1325
BmiI GGNNCC 3 cut(s) 318, 712, 1746
BmrFI CCNGG 7 cut(s) 1003, 1244, 1450, 1790, 1987, 2162, 2200
BmrI ACTGGG 2 cut(s) 604, 1081
BmsI GCATC 5 cut(s) 244, 352, 986, 1927, 2080
BmtI GCTAGC 1 cut(s) 1497
BmuI ACTGGG 2 cut(s) 604, 1081
BpiI GAAGAC 3 cut(s) 327, 851, 1840
BplI GAGNNNNNCTC 4 cut(s) 591, 623, 2024, 2056
BpmI CTGGAG 4 cut(s) 138, 1024, 2045, 2243
BpuEI CTTGAG 2 cut(s) 521, 1323
BpuMI CCSGG 1 cut(s) 1987
BsaAI YACGTR 1 cut(s) 1363
BsaHI GRCGYC 1 cut(s) 1405
BsaI GGTCTC 1 cut(s) 1261
BsaJI CCNNGG 8 cut(s) 75, 1242, 1243, 1297, 1789, 2160, 2238, 2256
BsaXI ACNNNNNCTCC 6 cut(s) 19, 49, 1550, 1580, 1860, 1890
Bsc4I CCNNNNNNNGG 5 cut(s) 869, 1444, 2199, 2239, 2244
Bse1I ACTGG 3 cut(s) 599, 1076, 1893
Bse3DI GCAATG 3 cut(s) 341, 1016, 1488
BseBI CCWGG 6 cut(s) 1003, 1244, 1450, 1790, 2162, 2200
BseDI CCNNGG 8 cut(s) 75, 1242, 1243, 1297, 1789, 2160, 2238, 2256
BseGI GGATG 4 cut(s) 529, 977, 1728, 2149
BseLI CCNNNNNNNGG 5 cut(s) 869, 1444, 2199, 2239, 2244
BseMI GCAATG 3 cut(s) 341, 1016, 1488
BseMII CTCAG 5 cut(s) 1183, 1461, 1539, 1540, 2124
BseNI ACTGG 3 cut(s) 599, 1076, 1893
BseRI GAGGAG 2 cut(s) 2240, 2276
BseSI GKGCMC 2 cut(s) 1900, 2161
BseXI GCAGC 7 cut(s) 181, 1061, 1099, 1135, 1399, 1625, 2167
BsgI GTGCAG 1 cut(s) 2015
Bsh1236I CGCG 2 cut(s) 1931, 2250
BshFI GGCC 4 cut(s) 1241, 1296, 1327, 1448
BshNI GGYRCC 1 cut(s) 710
BsiHKAI GWGCWC 1 cut(s) 1386
BsiSI CCGG 1 cut(s) 1986
BslFI GGGAC 4 cut(s) 218, 814, 860, 2051
BslI CCNNNNNNNGG 5 cut(s) 869, 1444, 2199, 2239, 2244
BsmAI GTCTC 3 cut(s) 1055, 1261, 1341
BsmFI GGGAC 4 cut(s) 218, 814, 860, 2051
BsmI GAATGC 3 cut(s) 409, 764, 979
BsnI GGCC 4 cut(s) 1241, 1296, 1327, 1448
Bso31I GGTCTC 1 cut(s) 1261
Bsp1286I GDGCHC 5 cut(s) 1386, 1900, 2161, 2256, 2276
Bsp1407I TGTACA 1 cut(s) 352
Bsp143I GATC 8 cut(s) 281, 445, 670, 1078, 1315, 1365, 1732, 2215
BspACI CCGC 7 cut(s) 297, 331, 1428, 1569, 2035, 2093, 2111
BspANI GGCC 4 cut(s) 1241, 1296, 1327, 1448
BspCNI CTCAG 5 cut(s) 1182, 1462, 1539, 1540, 2125
BspFNI CGCG 2 cut(s) 1931, 2250
BspHI TCATGA 2 cut(s) 433, 1192
BspLI GGNNCC 3 cut(s) 318, 712, 1746
BspMAI CTGCAG 2 cut(s) 199, 2185
BspMI ACCTGC 1 cut(s) 1526
BspOI GCTAGC 1 cut(s) 1497
BspPI GGATC 1 cut(s) 1310
BspT107I GGYRCC 1 cut(s) 710
BspTNI GGTCTC 1 cut(s) 1261
BsrBI CCGCTC 3 cut(s) 297, 1430, 2035
BsrDI GCAATG 3 cut(s) 341, 1016, 1488
BsrGI TGTACA 1 cut(s) 352
BsrI ACTGG 3 cut(s) 599, 1076, 1893
BssECI CCNNGG 8 cut(s) 75, 1242, 1243, 1297, 1789, 2160, 2238, 2256
BssMI GATC 8 cut(s) 281, 445, 670, 1078, 1315, 1365, 1732, 2215
BssNI GRCGYC 1 cut(s) 1405
BssSI CACGAG 1 cut(s) 1431
BssT1I CCWWGG 1 cut(s) 1297
Bst2BI CACGAG 1 cut(s) 1431
Bst2UI CCWGG 6 cut(s) 1003, 1244, 1450, 1790, 2162, 2200
Bst4CI ACNGT 4 cut(s) 476, 1269, 1717, 1839
Bst6I CTCTTC 5 cut(s) 94, 513, 1922, 1962, 2147
BstACI GRCGYC 1 cut(s) 1405
BstAPI GCANNNNNTGC 1 cut(s) 2002
BstAUI TGTACA 1 cut(s) 352
BstBAI YACGTR 1 cut(s) 1363
BstC8I GCNNGC 9 cut(s) 299, 493, 1017, 1085, 1231, 1495, 1911, 1942, 2252
BstDEI CTNAG 9 cut(s) 367, 1169, 1470, 1477, 1526, 1548, 1555, 1880, 2133
BstDSI CCRYGG 2 cut(s) 2238, 2256
BstEII GGTNACC 1 cut(s) 2077
BstF5I GGATG 4 cut(s) 529, 977, 1728, 2149
BstFNI CGCG 2 cut(s) 1931, 2250
BstH2I RGCGCY 1 cut(s) 2233
BstHHI GCGC 3 cut(s) 1867, 2232, 2250
BstKTI GATC 8 cut(s) 284, 448, 673, 1081, 1318, 1368, 1735, 2218
BstMAI GTCTC 3 cut(s) 1055, 1261, 1341
BstMBI GATC 8 cut(s) 281, 445, 670, 1078, 1315, 1365, 1732, 2215
BstMWI GCNNNNNNNGC 7 cut(s) 1157, 1454, 1499, 1577, 1937, 2002, 2189
BstNI CCWGG 6 cut(s) 1003, 1244, 1450, 1790, 2162, 2200
BstNSI RCATGY 3 cut(s) 465, 1087, 1461
BstPI GGTNACC 1 cut(s) 2077
BstSCI CCNGG 7 cut(s) 1001, 1242, 1448, 1788, 1985, 2160, 2198
BstSFI CTRYAG 2 cut(s) 195, 2181
BstSLI GKGCMC 2 cut(s) 1900, 2161
BstUI CGCG 2 cut(s) 1931, 2250
BstV1I GCAGC 7 cut(s) 181, 1061, 1099, 1135, 1399, 1625, 2167
BstV2I GAAGAC 3 cut(s) 327, 851, 1840
BstXI CCANNNNNNTGG 1 cut(s) 1225
BsuRI GGCC 4 cut(s) 1241, 1296, 1327, 1448
BtgI CCRYGG 2 cut(s) 2238, 2256
BtsCI GGATG 4 cut(s) 529, 977, 1728, 2149
BtsIMutI CAGTG 2 cut(s) 1844, 1900
BveI ACCTGC 1 cut(s) 1526
Cac8I GCNNGC 9 cut(s) 299, 493, 1017, 1085, 1231, 1495, 1911, 1942, 2252
CaiI CAGNNNCTG 1 cut(s) 2002
CciI TCATGA 2 cut(s) 433, 1192
CfoI GCGC 3 cut(s) 1867, 2232, 2250
Cfr13I GGNCC 3 cut(s) 317, 1240, 1325
CseI GACGC 2 cut(s) 1413, 1553
Csp6I GTAC 6 cut(s) 273, 325, 353, 1728, 1927, 2266
CviQI GTAC 6 cut(s) 273, 325, 353, 1728, 1927, 2266
DdeI CTNAG 9 cut(s) 367, 1169, 1470, 1477, 1526, 1548, 1555, 1880, 2133
DpnI GATC 8 cut(s) 283, 447, 672, 1080, 1317, 1367, 1734, 2217
DpnII GATC 8 cut(s) 281, 445, 670, 1078, 1315, 1365, 1732, 2215
EaeI YGGCCR 1 cut(s) 1446
Eam1104I CTCTTC 5 cut(s) 94, 513, 1922, 1962, 2147
EarI CTCTTC 5 cut(s) 94, 513, 1922, 1962, 2147
Eco130I CCWWGG 1 cut(s) 1297
Eco24I GRGCYC 2 cut(s) 2256, 2276
Eco31I GGTCTC 1 cut(s) 1261
Eco32I GATATC 1 cut(s) 929
Eco47I GGWCC 1 cut(s) 317
Eco57I CTGAAG 2 cut(s) 462, 1982
Eco91I GGTNACC 1 cut(s) 2077
EcoO109I RGGNCCY 1 cut(s) 1325
EcoO65I GGTNACC 1 cut(s) 2077
EcoRI GAATTC 1 cut(s) 887
EcoRII CCWGG 6 cut(s) 1001, 1242, 1448, 1788, 2160, 2198
EcoRV GATATC 1 cut(s) 929
EcoT14I CCWWGG 1 cut(s) 1297
EcoT22I ATGCAT 2 cut(s) 979, 1459
EcoT38I GRGCYC 2 cut(s) 2256, 2276
ErhI CCWWGG 1 cut(s) 1297
FalI AAGNNNNNCTT 2 cut(s) 1128, 1160
FaqI GGGAC 4 cut(s) 218, 814, 860, 2051
FauI CCCGC 3 cut(s) 290, 1435, 2028
FauNDI CATATG 2 cut(s) 880, 1054
FbaI TGATCA 1 cut(s) 1365
Fnu4HI GCNGC 8 cut(s) 195, 1050, 1088, 1149, 1413, 1639, 2094, 2181
FokI GGATG 4 cut(s) 536, 964, 1735, 2156
FriOI GRGCYC 2 cut(s) 2256, 2276
Fsp4HI GCNGC 8 cut(s) 195, 1050, 1088, 1149, 1413, 1639, 2094, 2181
FspBI CTAG 9 cut(s) 191, 639, 689, 1121, 1157, 1200, 1494, 1572, 1688
GlaI GCGC 3 cut(s) 1866, 2231, 2249
GluI GCNGC 8 cut(s) 195, 1050, 1088, 1149, 1413, 1639, 2094, 2181
GsuI CTGGAG 4 cut(s) 138, 1024, 2045, 2243
HaeII RGCGCY 1 cut(s) 2233
HaeIII GGCC 4 cut(s) 1241, 1296, 1327, 1448
HapII CCGG 1 cut(s) 1986
HgaI GACGC 2 cut(s) 1413, 1553
HhaI GCGC 3 cut(s) 1867, 2232, 2250
Hin1I GRCGYC 1 cut(s) 1405
Hin6I GCGC 3 cut(s) 1865, 2230, 2248
HinP1I GCGC 3 cut(s) 1865, 2230, 2248
HincII GTYRAC 1 cut(s) 1543
HindII GTYRAC 1 cut(s) 1543
HindIII AAGCTT 2 cut(s) 845, 1660
HpaII CCGG 1 cut(s) 1986
HphI GGTGA 5 cut(s) 84, 330, 533, 1313, 2161
Hpy166II GTNNAC 4 cut(s) 773, 1543, 1767, 1927
Hpy188I TCNGA 9 cut(s) 442, 1208, 1320, 1508, 1586, 1669, 2073, 2134, 2170
Hpy188III TCNNGA 9 cut(s) 155, 215, 320, 434, 1121, 1193, 1200, 1433, 2222
Hpy8I GTNNAC 4 cut(s) 773, 1543, 1767, 1927
Hpy99I CGWCG 1 cut(s) 918
HpyCH4III ACNGT 4 cut(s) 476, 1269, 1717, 1839
HpyCH4IV ACGT 3 cut(s) 170, 913, 1362
HpyF10VI GCNNNNNNNGC 7 cut(s) 1157, 1454, 1499, 1577, 1937, 2002, 2189
HpyF3I CTNAG 9 cut(s) 367, 1169, 1470, 1477, 1526, 1548, 1555, 1880, 2133
HpySE526I ACGT 3 cut(s) 170, 913, 1362
Hsp92I GRCGYC 1 cut(s) 1405
HspAI GCGC 3 cut(s) 1865, 2230, 2248
Ksp22I TGATCA 1 cut(s) 1365
Kzo9I GATC 8 cut(s) 281, 445, 670, 1078, 1315, 1365, 1732, 2215
LmnI GCTCC 4 cut(s) 473, 2032, 2113, 2227
Lsp1109I GCAGC 7 cut(s) 181, 1061, 1099, 1135, 1399, 1625, 2167
LweI GCATC 5 cut(s) 244, 352, 986, 1927, 2080
MaeI CTAG 9 cut(s) 191, 639, 689, 1121, 1157, 1200, 1494, 1572, 1688
MaeII ACGT 3 cut(s) 170, 913, 1362
MaeIII GTNAC 4 cut(s) 1309, 1418, 1433, 2077
MalI GATC 8 cut(s) 283, 447, 672, 1080, 1317, 1367, 1734, 2217
MbiI CCGCTC 3 cut(s) 297, 1430, 2035
MboI GATC 8 cut(s) 281, 445, 670, 1078, 1315, 1365, 1732, 2215
MhlI GDGCHC 5 cut(s) 1386, 1900, 2161, 2256, 2276
MlsI TGGCCA 1 cut(s) 1448
MluCI AATT 9 cut(s) 143, 163, 249, 381, 887, 908, 1517, 1676, 2106
MluNI TGGCCA 1 cut(s) 1448
MlyI GAGTC 7 cut(s) 43, 790, 1190, 1343, 2033, 2062, 2159
MmeI TCCRAC 1 cut(s) 93
Mox20I TGGCCA 1 cut(s) 1448
Mph1103I ATGCAT 2 cut(s) 979, 1459
MroXI GAANNNNTTC 2 cut(s) 891, 1521
MscI TGGCCA 1 cut(s) 1448
MseI TTAA 6 cut(s) 239, 288, 510, 1235, 1680, 2058
MslI CAYNNNNRTG 4 cut(s) 744, 810, 896, 1223
Msp20I TGGCCA 1 cut(s) 1448
MspI CCGG 1 cut(s) 1986
MspR9I CCNGG 7 cut(s) 1003, 1244, 1450, 1790, 1987, 2162, 2200
Mva1269I GAATGC 3 cut(s) 409, 764, 979
MvaI CCWGG 6 cut(s) 1003, 1244, 1450, 1790, 2162, 2200
MvnI CGCG 2 cut(s) 1931, 2250
MwoI GCNNNNNNNGC 7 cut(s) 1157, 1454, 1499, 1577, 1937, 2002, 2189
NciI CCSGG 1 cut(s) 1987
NdeI CATATG 2 cut(s) 880, 1054
NdeII GATC 8 cut(s) 281, 445, 670, 1078, 1315, 1365, 1732, 2215
NheI GCTAGC 1 cut(s) 1493
NlaIV GGNNCC 3 cut(s) 318, 712, 1746
NmeAIII GCCGAG 1 cut(s) 1433
NmuCI GTSAC 3 cut(s) 1309, 1418, 1433
NsiI ATGCAT 2 cut(s) 979, 1459
NspI RCATGY 3 cut(s) 465, 1087, 1461
PaeI GCATGC 1 cut(s) 1087
PagI TCATGA 2 cut(s) 433, 1192
PaqCI CACCTGC 1 cut(s) 1526
PasI CCCWGGG 1 cut(s) 1243
PciI ACATGT 1 cut(s) 461
PctI GAATGC 3 cut(s) 409, 764, 979
PdmI GAANNNNTTC 2 cut(s) 891, 1521
PfeI GAWTC 8 cut(s) 65, 437, 530, 659, 1203, 1522, 1595, 2186
PflMI CCANNNNNTGG 1 cut(s) 2199
PfoI TCCNGGA 3 cut(s) 1001, 1985, 2198
PkrI GCNGC 8 cut(s) 196, 1051, 1089, 1150, 1414, 1640, 2095, 2182
PleI GAGTC 7 cut(s) 42, 789, 1190, 1342, 2033, 2062, 2159
PpsI GAGTC 7 cut(s) 42, 789, 1190, 1342, 2033, 2062, 2159
Ppu21I YACGTR 1 cut(s) 1363
PscI ACATGT 1 cut(s) 461
PsiI TTATAA 1 cut(s) 570
Psp6I CCWGG 6 cut(s) 1001, 1242, 1448, 1788, 2160, 2198
PspEI GGTNACC 1 cut(s) 2077
PspGI CCWGG 6 cut(s) 1001, 1242, 1448, 1788, 2160, 2198
PspN4I GGNNCC 3 cut(s) 318, 712, 1746
PspPI GGNCC 3 cut(s) 317, 1240, 1325
PstI CTGCAG 2 cut(s) 199, 2185
PstNI CAGNNNCTG 1 cut(s) 2002
RsaI GTAC 6 cut(s) 274, 326, 354, 1729, 1928, 2267
RsaNI GTAC 6 cut(s) 273, 325, 353, 1728, 1927, 2266
RseI CAYNNNNRTG 4 cut(s) 744, 810, 896, 1223
SaqAI TTAA 6 cut(s) 239, 288, 510, 1235, 1680, 2058
SatI GCNGC 8 cut(s) 195, 1050, 1088, 1149, 1413, 1639, 2094, 2181
Sau3AI GATC 8 cut(s) 281, 445, 670, 1078, 1315, 1365, 1732, 2215
Sau96I GGNCC 3 cut(s) 317, 1240, 1325
SchI GAGTC 7 cut(s) 43, 790, 1190, 1343, 2033, 2062, 2159
ScrFI CCNGG 7 cut(s) 1003, 1244, 1450, 1790, 1987, 2162, 2200
SduI GDGCHC 5 cut(s) 1386, 1900, 2161, 2256, 2276
SfaNI GCATC 5 cut(s) 244, 352, 986, 1927, 2080
SfcI CTRYAG 2 cut(s) 195, 2181
SinI GGWCC 1 cut(s) 317
SmiMI CAYNNNNRTG 4 cut(s) 744, 810, 896, 1223
SmlI CTYRAG 2 cut(s) 500, 1338
SmoI CTYRAG 2 cut(s) 500, 1338
SphI GCATGC 1 cut(s) 1087
Sse9I AATT 9 cut(s) 143, 163, 249, 381, 887, 908, 1517, 1676, 2106
SsiI CCGC 7 cut(s) 297, 331, 1428, 1569, 2035, 2093, 2111
SspI AATATT 1 cut(s) 666
SspMI CTAG 9 cut(s) 191, 639, 689, 1121, 1157, 1200, 1494, 1572, 1688
StyD4I CCNGG 7 cut(s) 1001, 1242, 1448, 1788, 1985, 2160, 2198
StyI CCWWGG 1 cut(s) 1297
TaaI ACNGT 4 cut(s) 476, 1269, 1717, 1839
TaiI ACGT 3 cut(s) 173, 916, 1365
TaqI TCGA 2 cut(s) 20, 616
TaqII GACCGA 1 cut(s) 67
TasI AATT 9 cut(s) 143, 163, 249, 381, 887, 908, 1517, 1676, 2106
TatI WGTACW 4 cut(s) 272, 324, 352, 2265
TauI GCSGC 1 cut(s) 2096
TfiI GAWTC 8 cut(s) 65, 437, 530, 659, 1203, 1522, 1595, 2186
Tru1I TTAA 6 cut(s) 239, 288, 510, 1235, 1680, 2058
Tru9I TTAA 6 cut(s) 239, 288, 510, 1235, 1680, 2058
TscAI CASTG 2 cut(s) 1844, 1900
TseFI GTSAC 3 cut(s) 1309, 1418, 1433
TseI GCWGC 7 cut(s) 194, 1049, 1087, 1148, 1412, 1638, 2180
Tsp45I GTSAC 3 cut(s) 1309, 1418, 1433
TspGWI ACGGA 1 cut(s) 220
TspRI CASTG 2 cut(s) 1844, 1900
Van91I CCANNNNNTGG 1 cut(s) 2199
VpaK11BI GGWCC 1 cut(s) 317
XapI RAATTY 2 cut(s) 143, 887
XbaI TCTAGA 2 cut(s) 1120, 1199
XceI RCATGY 3 cut(s) 465, 1087, 1461
XmnI GAANNNNTTC 2 cut(s) 891, 1521
XspI CTAG 9 cut(s) 191, 639, 689, 1121, 1157, 1200, 1494, 1572, 1688
Zsp2I ATGCAT 2 cut(s) 979, 1459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.