Helitron helicase-like domain at N-terminus
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 40 |
| AccI | GTMKAC | 1 cut(s) | 761 |
| AciI | CCGC | 2 cut(s) | 590, 893 |
| AclI | AACGTT | 1 cut(s) | 429 |
| AcsI | RAATTY | 2 cut(s) | 502, 564 |
| AcuI | CTGAAG | 3 cut(s) | 129, 375, 872 |
| AcyI | GRCGYC | 1 cut(s) | 37 |
| AfaI | GTAC | 3 cut(s) | 130, 441, 835 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 685, 686 |
| AflIII | ACRYGT | 2 cut(s) | 169, 682 |
| AgsI | TTSAA | 3 cut(s) | 138, 220, 605 |
| AluBI | AGCT | 8 cut(s) | 50, 95, 245, 479, 639, 772, 850, 869 |
| AluI | AGCT | 8 cut(s) | 50, 95, 245, 479, 639, 772, 850, 869 |
| Alw26I | GTCTC | 1 cut(s) | 445 |
| ApeKI | GCWGC | 3 cut(s) | 95, 257, 476 |
| ApoI | RAATTY | 2 cut(s) | 502, 564 |
| AspLEI | GCGC | 2 cut(s) | 418, 925 |
| AspS9I | GGNCC | 1 cut(s) | 789 |
| AsuHPI | GGTGA | 1 cut(s) | 812 |
| AvaII | GGWCC | 1 cut(s) | 789 |
| BanII | GRGCYC | 1 cut(s) | 8 |
| BauI | CACGAG | 1 cut(s) | 180 |
| BbvI | GCAGC | 3 cut(s) | 82, 244, 488 |
| BccI | CCATC | 7 cut(s) | 183, 233, 329, 365, 683, 800, 876 |
| BceAI | ACGGC | 1 cut(s) | 344 |
| BcoDI | GTCTC | 1 cut(s) | 445 |
| BfaI | CTAG | 4 cut(s) | 480, 546, 626, 858 |
| BisI | GCNGC | 4 cut(s) | 96, 258, 477, 894 |
| BlsI | GCNGC | 4 cut(s) | 97, 259, 478, 895 |
| BmcAI | AGTACT | 1 cut(s) | 835 |
| Bme18I | GGWCC | 1 cut(s) | 789 |
| BmgT120I | GGNCC | 1 cut(s) | 789 |
| BmiI | GGNNCC | 1 cut(s) | 790 |
| BmsI | GCATC | 2 cut(s) | 10, 502 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 681, 713 |
| BpuEI | CTTGAG | 2 cut(s) | 36, 648 |
| Bsa29I | ATCGAT | 1 cut(s) | 369 |
| BsaBI | GATNNNNATC | 1 cut(s) | 375 |
| BsaHI | GRCGYC | 1 cut(s) | 37 |
| BsaJI | CCNNGG | 1 cut(s) | 65 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 685, 686 |
| Bse3DI | GCAATG | 1 cut(s) | 271 |
| Bse8I | GATNNNNATC | 1 cut(s) | 375 |
| BseCI | ATCGAT | 1 cut(s) | 369 |
| BseDI | CCNNGG | 1 cut(s) | 65 |
| BseGI | GGATG | 2 cut(s) | 175, 675 |
| BseJI | GATNNNNATC | 1 cut(s) | 375 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 685, 686 |
| BseMI | GCAATG | 1 cut(s) | 271 |
| BseRI | GAGGAG | 1 cut(s) | 762 |
| BseXI | GCAGC | 3 cut(s) | 82, 244, 488 |
| BsgI | GTGCAG | 2 cut(s) | 81, 600 |
| Bsh1285I | CGRYCG | 1 cut(s) | 124 |
| BshVI | ATCGAT | 1 cut(s) | 369 |
| BsiEI | CGRYCG | 1 cut(s) | 124 |
| BslFI | GGGAC | 2 cut(s) | 233, 606 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 685, 686 |
| BsmAI | GTCTC | 1 cut(s) | 445 |
| BsmBI | CGTCTC | 1 cut(s) | 445 |
| BsmFI | GGGAC | 2 cut(s) | 233, 606 |
| BsmI | GAATGC | 1 cut(s) | 462 |
| Bsp1286I | GDGCHC | 1 cut(s) | 8 |
| Bsp143I | GATC | 3 cut(s) | 121, 376, 703 |
| BspACI | CCGC | 2 cut(s) | 590, 893 |
| BspDI | ATCGAT | 1 cut(s) | 369 |
| BspHI | TCATGA | 3 cut(s) | 295, 409, 718 |
| BspLI | GGNNCC | 1 cut(s) | 790 |
| BsrDI | GCAATG | 1 cut(s) | 271 |
| BssECI | CCNNGG | 1 cut(s) | 65 |
| BssMI | GATC | 3 cut(s) | 121, 376, 703 |
| BssNI | GRCGYC | 1 cut(s) | 37 |
| BssSI | CACGAG | 1 cut(s) | 180 |
| BssT1I | CCWWGG | 1 cut(s) | 65 |
| Bst2BI | CACGAG | 1 cut(s) | 180 |
| Bst4CI | ACNGT | 4 cut(s) | 104, 392, 600, 953 |
| BstACI | GRCGYC | 1 cut(s) | 37 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 587 |
| BstC8I | GCNNGC | 3 cut(s) | 210, 262, 399 |
| BstDEI | CTNAG | 1 cut(s) | 819 |
| BstF5I | GGATG | 2 cut(s) | 175, 675 |
| BstHHI | GCGC | 2 cut(s) | 418, 925 |
| BstKTI | GATC | 3 cut(s) | 124, 379, 706 |
| BstMAI | GTCTC | 1 cut(s) | 445 |
| BstMBI | GATC | 3 cut(s) | 121, 376, 703 |
| BstMCI | CGRYCG | 1 cut(s) | 124 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 587 |
| BstNSI | RCATGY | 4 cut(s) | 173, 401, 686, 900 |
| BstV1I | GCAGC | 3 cut(s) | 82, 244, 488 |
| Bsu15I | ATCGAT | 1 cut(s) | 369 |
| BsuTUI | ATCGAT | 1 cut(s) | 369 |
| BtgZI | GCGATG | 1 cut(s) | 895 |
| BtsCI | GGATG | 2 cut(s) | 175, 675 |
| BtsIMutI | CAGTG | 3 cut(s) | 351, 397, 943 |
| Cac8I | GCNNGC | 3 cut(s) | 210, 262, 399 |
| CciI | TCATGA | 3 cut(s) | 295, 409, 718 |
| CfoI | GCGC | 2 cut(s) | 418, 925 |
| Cfr13I | GGNCC | 1 cut(s) | 789 |
| ClaI | ATCGAT | 1 cut(s) | 369 |
| Csp6I | GTAC | 3 cut(s) | 129, 440, 834 |
| CviQI | GTAC | 3 cut(s) | 129, 440, 834 |
| DdeI | CTNAG | 1 cut(s) | 819 |
| DpnI | GATC | 3 cut(s) | 123, 378, 705 |
| DpnII | GATC | 3 cut(s) | 121, 376, 703 |
| Eco130I | CCWWGG | 1 cut(s) | 65 |
| Eco24I | GRGCYC | 1 cut(s) | 8 |
| Eco47I | GGWCC | 1 cut(s) | 789 |
| Eco57I | CTGAAG | 3 cut(s) | 129, 375, 872 |
| EcoRI | GAATTC | 1 cut(s) | 564 |
| EcoT14I | CCWWGG | 1 cut(s) | 65 |
| EcoT22I | ATGCAT | 1 cut(s) | 25 |
| EcoT38I | GRGCYC | 1 cut(s) | 8 |
| ErhI | CCWWGG | 1 cut(s) | 65 |
| Esp3I | CGTCTC | 1 cut(s) | 445 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 553, 585, 623, 655 |
| FaqI | GGGAC | 2 cut(s) | 233, 606 |
| FauI | CCCGC | 1 cut(s) | 583 |
| FblI | GTMKAC | 1 cut(s) | 761 |
| Fnu4HI | GCNGC | 4 cut(s) | 96, 258, 477, 894 |
| FokI | GGATG | 2 cut(s) | 162, 662 |
| FriOI | GRGCYC | 1 cut(s) | 8 |
| Fsp4HI | GCNGC | 4 cut(s) | 96, 258, 477, 894 |
| FspBI | CTAG | 4 cut(s) | 480, 546, 626, 858 |
| GlaI | GCGC | 2 cut(s) | 417, 924 |
| GluI | GCNGC | 4 cut(s) | 96, 258, 477, 894 |
| HhaI | GCGC | 2 cut(s) | 418, 925 |
| Hin1I | GRCGYC | 1 cut(s) | 37 |
| Hin6I | GCGC | 2 cut(s) | 416, 923 |
| HinP1I | GCGC | 2 cut(s) | 416, 923 |
| HinfI | GANTC | 3 cut(s) | 113, 152, 758 |
| HphI | GGTGA | 1 cut(s) | 812 |
| Hpy166II | GTNNAC | 3 cut(s) | 310, 694, 762 |
| Hpy188I | TCNGA | 4 cut(s) | 13, 109, 151, 757 |
| Hpy188III | TCNNGA | 6 cut(s) | 138, 296, 410, 546, 719, 744 |
| Hpy8I | GTNNAC | 3 cut(s) | 310, 694, 762 |
| Hpy99I | CGWCG | 3 cut(s) | 39, 42, 830 |
| HpyAV | CCTTC | 1 cut(s) | 18 |
| HpyCH4III | ACNGT | 4 cut(s) | 104, 392, 600, 953 |
| HpyCH4IV | ACGT | 5 cut(s) | 16, 37, 306, 429, 825 |
| HpyCH4V | TGCA | 9 cut(s) | 23, 44, 98, 401, 462, 476, 515, 574, 581 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 587 |
| HpyF3I | CTNAG | 1 cut(s) | 819 |
| HpySE526I | ACGT | 5 cut(s) | 16, 37, 306, 429, 825 |
| Hsp92I | GRCGYC | 1 cut(s) | 37 |
| HspAI | GCGC | 2 cut(s) | 416, 923 |
| Kzo9I | GATC | 3 cut(s) | 121, 376, 703 |
| LmnI | GCTCC | 1 cut(s) | 242 |
| LpnPI | CCDG | 3 cut(s) | 513, 714, 875 |
| Lsp1109I | GCAGC | 3 cut(s) | 82, 244, 488 |
| LweI | GCATC | 2 cut(s) | 10, 502 |
| MaeI | CTAG | 4 cut(s) | 480, 546, 626, 858 |
| MaeII | ACGT | 5 cut(s) | 16, 37, 306, 429, 825 |
| MaeIII | GTNAC | 3 cut(s) | 225, 386, 938 |
| MalI | GATC | 3 cut(s) | 123, 378, 705 |
| MboI | GATC | 3 cut(s) | 121, 376, 703 |
| MboII | GAAGA | 4 cut(s) | 122, 506, 815, 875 |
| MhlI | GDGCHC | 1 cut(s) | 8 |
| MluCI | AATT | 6 cut(s) | 141, 502, 519, 564, 620, 725 |
| MlyI | GAGTC | 2 cut(s) | 146, 767 |
| MmeI | TCCRAC | 1 cut(s) | 180 |
| MnlI | CCTC | 4 cut(s) | 119, 406, 707, 740 |
| Mph1103I | ATGCAT | 1 cut(s) | 25 |
| MseI | TTAA | 2 cut(s) | 191, 780 |
| MslI | CAYNNNNRTG | 1 cut(s) | 402 |
| MspA1I | CMGCKG | 1 cut(s) | 95 |
| Mva1269I | GAATGC | 1 cut(s) | 462 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 587 |
| NdeII | GATC | 3 cut(s) | 121, 376, 703 |
| NlaIV | GGNNCC | 1 cut(s) | 790 |
| NmuCI | GTSAC | 3 cut(s) | 225, 386, 938 |
| NsiI | ATGCAT | 1 cut(s) | 25 |
| NspI | RCATGY | 4 cut(s) | 173, 401, 686, 900 |
| PaeI | GCATGC | 1 cut(s) | 401 |
| PagI | TCATGA | 3 cut(s) | 295, 409, 718 |
| PciI | ACATGT | 2 cut(s) | 169, 682 |
| PctI | GAATGC | 1 cut(s) | 462 |
| PfeI | GAWTC | 1 cut(s) | 113 |
| PkrI | GCNGC | 4 cut(s) | 97, 259, 478, 895 |
| Ple19I | CGATCG | 1 cut(s) | 124 |
| PleI | GAGTC | 2 cut(s) | 146, 766 |
| PpsI | GAGTC | 2 cut(s) | 146, 766 |
| PscI | ACATGT | 2 cut(s) | 169, 682 |
| Psp1406I | AACGTT | 1 cut(s) | 429 |
| PspN4I | GGNNCC | 1 cut(s) | 790 |
| PspPI | GGNCC | 1 cut(s) | 789 |
| PvuI | CGATCG | 1 cut(s) | 124 |
| PvuII | CAGCTG | 1 cut(s) | 95 |
| RsaI | GTAC | 3 cut(s) | 130, 441, 835 |
| RsaNI | GTAC | 3 cut(s) | 129, 440, 834 |
| RseI | CAYNNNNRTG | 1 cut(s) | 402 |
| SaqAI | TTAA | 2 cut(s) | 191, 780 |
| SatI | GCNGC | 4 cut(s) | 96, 258, 477, 894 |
| Sau3AI | GATC | 3 cut(s) | 121, 376, 703 |
| Sau96I | GGNCC | 1 cut(s) | 789 |
| ScaI | AGTACT | 1 cut(s) | 835 |
| SchI | GAGTC | 2 cut(s) | 146, 767 |
| SduI | GDGCHC | 1 cut(s) | 8 |
| SfaNI | GCATC | 2 cut(s) | 10, 502 |
| SinI | GGWCC | 1 cut(s) | 789 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 402 |
| SmlI | CTYRAG | 2 cut(s) | 51, 663 |
| SmoI | CTYRAG | 2 cut(s) | 51, 663 |
| SphI | GCATGC | 1 cut(s) | 401 |
| Sse9I | AATT | 6 cut(s) | 141, 502, 519, 564, 620, 725 |
| SsiI | CCGC | 2 cut(s) | 590, 893 |
| SspMI | CTAG | 4 cut(s) | 480, 546, 626, 858 |
| StyI | CCWWGG | 1 cut(s) | 65 |
| TaaI | ACNGT | 4 cut(s) | 104, 392, 600, 953 |
| TaiI | ACGT | 5 cut(s) | 19, 40, 309, 432, 828 |
| TaqI | TCGA | 5 cut(s) | 124, 187, 369, 436, 743 |
| TasI | AATT | 6 cut(s) | 141, 502, 519, 564, 620, 725 |
| TatI | WGTACW | 1 cut(s) | 833 |
| TauI | GCSGC | 1 cut(s) | 896 |
| TfiI | GAWTC | 1 cut(s) | 113 |
| Tru1I | TTAA | 2 cut(s) | 191, 780 |
| Tru9I | TTAA | 2 cut(s) | 191, 780 |
| TscAI | CASTG | 3 cut(s) | 358, 397, 943 |
| TseFI | GTSAC | 3 cut(s) | 225, 386, 938 |
| TseI | GCWGC | 3 cut(s) | 95, 257, 476 |
| Tsp45I | GTSAC | 3 cut(s) | 225, 386, 938 |
| TspDTI | ATGAA | 5 cut(s) | 302, 422, 507, 735, 901 |
| TspRI | CASTG | 3 cut(s) | 358, 397, 943 |
| VpaK11BI | GGWCC | 1 cut(s) | 789 |
| XapI | RAATTY | 2 cut(s) | 502, 564 |
| XbaI | TCTAGA | 1 cut(s) | 545 |
| XceI | RCATGY | 4 cut(s) | 173, 401, 686, 900 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 682, 772 |
| XmiI | GTMKAC | 1 cut(s) | 761 |
| XspI | CTAG | 4 cut(s) | 480, 546, 626, 858 |
| ZraI | GACGTC | 1 cut(s) | 38 |
| ZrmI | AGTACT | 1 cut(s) | 835 |
| Zsp2I | ATGCAT | 1 cut(s) | 25 |