Rmu_sc0005400.1_g000007

Helicase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005400.1
OG0000080
Physical Location & Seq
Reverse (-)
67619 .. 69484
1866 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005400.1_g000007.1.cds

Sequence Viewer

Length: 1866 bp
atgatctatgaactggaggtcaatagtgatcatatgattgtcacagtagatggcatcttgcaaccaacatttaagaaagcggctgaacaacgaggtctgttagaagacgatgatagtatccgacaatgtttacatgaggcttcaagcatacatatgtcttcatctttaaggagattgtttgtcactatcttggtttattgcgagcctcatggggtacgaagtttatgggatgaattttaccaatttatgatagaagattatgcttcttcaagcactgcagtcagtgtacatatcacaaacagacttttacgagacttaaacggattgctggtgcaacatagtaaatctgtttgtgattatgatttgcctgaaatggctgaagattatggtgaagattcgtcagtgcctaggctaatacaggatgaagtttcaattatcattcctcaagaagactgcgatgcagttcatctcttgaatgaggatcagacatttgcatacaacgcaataatatcagctattgagtgcaatgacaatgccatatttttcgttgatggtccaggagggactggaaaaacatacttatatcgtgcacttttagcaaccttgagaagcaatgatcatattgtgttggcaacagcaacttctggaattgcagcaacaataatacctagtgggagaacgacacactccaggtttaaaattccactcaatcttgatgcatcttctacatgctctattagtaaacaatctaatttagcagagttgatacgaagatcatcaacgattatttgtgatgaggcaccaatgatgcatagatttgcatttgaagctcttgatcggacttttaaagacataatagatgttgatttgccattttggggcaaagtgattatttttgggggagatttccgacaagttctgcccgttgtccataagggtacaaggtctcagatggtccaagccagtctggttaactcttcattttggaaagatgtgaggattcttcgtttgcggcaaaatatgagatctatcaatgatccagagttctcagagtttttacttaattttggtaatggagaacaaccatctatggttgaagacatgatacgattaccgtcgtgtaaggccataccatgggagggtgaagagtcaatcaaccgattagttaatgaagtttttcctaatttggaatctcatgtaaatgatgcagcgtacacggttgaaagggcaataatcactccaaagaatgatgatgttgacgtgcttaatgagatgattataaagcaatttccagggcctgaacggatcatgtactctttcgactcagttgaggatgacactagaaatatgtatcaacaagaattcttaaattcaatttcaccttctggtatgcccccacatcagttaactataaaaaaaggtgctcccattatgcttttgagaaatattgaccctacgatgggattgtgcaatggtacacgattgacttgccgtggatcatataacaaccttattgacgcagagattttaactggtcaatttgttggaactagagtattcttaccaagaatatctctaaagagtgccgagagttctggactcccttttgagatgacaagaaaacaattccctgtaaagttgagttttgcacttactataaataaatcacaagggaaaacgataccgaatgttggcatctacgttccagatcatgtattcagtcatgggcagttatatgtcgctttatcacgaggaatttcagaggctaccaccaaagtgttagtcaagaaaggctcatttgaaggcgaggaaggggtgttcacaacaaatgttgtttataaagagattttgcttccagcaagttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

621

Amino Acids

69.59

Weight (kDa)

5.22

Isoelectric Point (pI)

46.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1280, 1839
AccB1I GGYRCC 1 cut(s) 799
AccB7I CCANNNNNTGG 1 cut(s) 1134
AciI CCGC 2 cut(s) 80, 1012
AclWI GGATC 4 cut(s) 489, 1031, 1313, 1504
AcsI RAATTY 5 cut(s) 233, 699, 1361, 1369, 1755
AcuI CTGAAG 1 cut(s) 399
AfaI GTAC 6 cut(s) 216, 288, 940, 1214, 1313, 1477
AfiI CCNNNNNNNGG 6 cut(s) 878, 1134, 1139, 1459, 1460, 1691
AgsI TTSAA 9 cut(s) 144, 270, 432, 475, 827, 1097, 1223, 1374, 1802
AjiI CACGTC 1 cut(s) 1261
AjnI CCWGG 3 cut(s) 556, 689, 1291
AleI CACNNNNGTG 1 cut(s) 1775
AloI GAACNNNNNNTCC 2 cut(s) 1802, 1834
AluBI AGCT 2 cut(s) 515, 830
AluI AGCT 2 cut(s) 515, 830
Alw21I GWGCWC 2 cut(s) 592, 1426
Alw26I GTCTC 2 cut(s) 306, 951
Alw44I GTGCAC 1 cut(s) 588
AlwI GGATC 4 cut(s) 489, 1031, 1313, 1504
AlwNI CAGNNNCTG 1 cut(s) 1298
AoxI GGCC 2 cut(s) 1125, 1295
ApaLI GTGCAC 1 cut(s) 588
ApeKI GCWGC 2 cut(s) 653, 1208
ApoI RAATTY 5 cut(s) 233, 699, 1361, 1369, 1755
ArsI GACNNNNNNTTYG 2 cut(s) 1767, 1799
Asp700I GAANNNNTTC 1 cut(s) 1176
AspA2I CCTAGG 1 cut(s) 407
AspS9I GGNCC 3 cut(s) 554, 955, 1295
AsuHPI GGTGA 3 cut(s) 401, 1154, 1371
AvaII GGWCC 2 cut(s) 554, 955
AvrII CCTAGG 1 cut(s) 407
BaeGI GKGCMC 1 cut(s) 592
BanI GGYRCC 1 cut(s) 799
BarI GAAGNNNNNNTAC 2 cut(s) 1089, 1121
BauI CACGAG 1 cut(s) 1749
BbsI GAAGAC 4 cut(s) 111, 150, 456, 1104
Bbv12I GWGCWC 2 cut(s) 592, 1426
BbvI GCAGC 2 cut(s) 665, 1220
BccI CCATC 5 cut(s) 44, 545, 946, 1093, 1453
BceAI ACGGC 1 cut(s) 1476
BcgI CGANNNNNNTGC 2 cut(s) 1470, 1504
BciT130I CCWGG 3 cut(s) 558, 691, 1293
BciVI GTATCC 1 cut(s) 128
BclI TGATCA 2 cut(s) 28, 616
BcoDI GTCTC 2 cut(s) 306, 951
BfaI CTAG 4 cut(s) 408, 669, 1341, 1551
BfmI CTRYAG 1 cut(s) 276
BfuI GTATCC 1 cut(s) 128
BglII AGATCT 1 cut(s) 1025
BisI GCNGC 4 cut(s) 81, 654, 1013, 1209
BlnI CCTAGG 1 cut(s) 407
BlsI GCNGC 4 cut(s) 82, 655, 1014, 1210
Bme1390I CCNGG 3 cut(s) 558, 691, 1293
Bme18I GGWCC 2 cut(s) 554, 955
BmgBI CACGTC 1 cut(s) 1261
BmgT120I GGNCC 3 cut(s) 554, 955, 1295
BmiI GGNNCC 1 cut(s) 801
BmrFI CCNGG 3 cut(s) 558, 691, 1293
BmsI GCATC 7 cut(s) 63, 448, 706, 728, 798, 1195, 1704
BpiI GAAGAC 4 cut(s) 111, 150, 456, 1104
BpmI CTGGAG 2 cut(s) 35, 673
BpuEI CTTGAG 2 cut(s) 429, 625
BsaI GGTCTC 1 cut(s) 951
BsaJI CCNNGG 4 cut(s) 407, 1133, 1292, 1492
Bsc4I CCNNNNNNNGG 6 cut(s) 878, 1134, 1139, 1459, 1460, 1691
Bse1I ACTGG 4 cut(s) 18, 571, 963, 1537
Bse3DI GCAATG 3 cut(s) 532, 619, 1477
BseBI CCWGG 3 cut(s) 558, 691, 1293
BseDI CCNNGG 4 cut(s) 407, 1133, 1292, 1492
BseGI GGATG 3 cut(s) 235, 427, 1339
BseLI CCNNNNNNNGG 6 cut(s) 878, 1134, 1139, 1459, 1460, 1691
BseMI GCAATG 3 cut(s) 532, 619, 1477
BseMII CTCAG 3 cut(s) 962, 1062, 1338
BseNI ACTGG 4 cut(s) 18, 571, 963, 1537
BseSI GKGCMC 1 cut(s) 592
BseXI GCAGC 2 cut(s) 665, 1220
BshFI GGCC 2 cut(s) 1127, 1297
BshNI GGYRCC 1 cut(s) 799
BsiHKAI GWGCWC 2 cut(s) 592, 1426
BslFI GGGAC 1 cut(s) 577
BslI CCNNNNNNNGG 6 cut(s) 878, 1134, 1139, 1459, 1460, 1691
BsmAI GTCTC 2 cut(s) 306, 951
BsmFI GGGAC 1 cut(s) 577
BsnI GGCC 2 cut(s) 1127, 1297
Bso31I GGTCTC 1 cut(s) 951
Bsp1286I GDGCHC 2 cut(s) 592, 1426
Bsp1407I TGTACA 1 cut(s) 286
Bsp19I CCATGG 1 cut(s) 1133
BspACI CCGC 2 cut(s) 80, 1012
BspANI GGCC 2 cut(s) 1127, 1297
BspCNI CTCAG 3 cut(s) 961, 1061, 1337
BspLI GGNNCC 1 cut(s) 801
BspMAI CTGCAG 1 cut(s) 280
BspPI GGATC 4 cut(s) 489, 1031, 1313, 1504
BspT107I GGYRCC 1 cut(s) 799
BspTNI GGTCTC 1 cut(s) 951
BsrDI GCAATG 3 cut(s) 532, 619, 1477
BsrGI TGTACA 1 cut(s) 286
BsrI ACTGG 4 cut(s) 18, 571, 963, 1537
BssECI CCNNGG 4 cut(s) 407, 1133, 1292, 1492
BssSI CACGAG 1 cut(s) 1749
BssT1I CCWWGG 2 cut(s) 407, 1133
Bst2BI CACGAG 1 cut(s) 1749
Bst2UI CCWGG 3 cut(s) 558, 691, 1293
Bst4CI ACNGT 3 cut(s) 46, 1116, 1219
Bst6I CTCTTC 2 cut(s) 982, 1140
BstAUI TGTACA 1 cut(s) 286
BstC8I GCNNGC 1 cut(s) 203
BstDEI CTNAG 3 cut(s) 948, 1048, 1324
BstDSI CCRYGG 2 cut(s) 1133, 1492
BstF5I GGATG 3 cut(s) 235, 427, 1339
BstMAI GTCTC 2 cut(s) 306, 951
BstMWI GCNNNNNNNGC 3 cut(s) 500, 596, 827
BstNI CCWGG 3 cut(s) 558, 691, 1293
BstNSI RCATGY 1 cut(s) 732
BstSCI CCNGG 3 cut(s) 556, 689, 1291
BstSFI CTRYAG 1 cut(s) 276
BstSLI GKGCMC 1 cut(s) 592
BstV1I GCAGC 2 cut(s) 665, 1220
BstV2I GAAGAC 4 cut(s) 111, 150, 456, 1104
BstX2I RGATCY 1 cut(s) 1025
BstYI RGATCY 1 cut(s) 1025
BsuI GTATCC 1 cut(s) 128
BsuRI GGCC 2 cut(s) 1127, 1297
BtgI CCRYGG 2 cut(s) 1133, 1492
BtgZI GCGATG 1 cut(s) 471
BtrI CACGTC 1 cut(s) 1261
BtsCI GGATG 3 cut(s) 235, 427, 1339
BtsI GCAGTG 1 cut(s) 273
BtsIMutI CAGTG 3 cut(s) 273, 289, 408
Cac8I GCNNGC 1 cut(s) 203
CaiI CAGNNNCTG 1 cut(s) 1298
Cfr13I GGNCC 3 cut(s) 554, 955, 1295
CseI GACGC 1 cut(s) 1526
Csp6I GTAC 6 cut(s) 215, 287, 939, 1213, 1312, 1476
CviAII CATG 9 cut(s) 134, 209, 729, 1102, 1134, 1196, 1309, 1712, 1724
CviQI GTAC 6 cut(s) 215, 287, 939, 1213, 1312, 1476
DdeI CTNAG 3 cut(s) 948, 1048, 1324
DraI TTTAAA 2 cut(s) 697, 847
Eam1104I CTCTTC 2 cut(s) 982, 1140
EarI CTCTTC 2 cut(s) 982, 1140
Eco130I CCWWGG 2 cut(s) 407, 1133
Eco31I GGTCTC 1 cut(s) 951
Eco47I GGWCC 2 cut(s) 554, 955
Eco57I CTGAAG 1 cut(s) 399
EcoO109I RGGNCCY 1 cut(s) 1295
EcoRI GAATTC 1 cut(s) 1361
EcoRII CCWGG 3 cut(s) 556, 689, 1291
EcoT14I CCWWGG 2 cut(s) 407, 1133
EcoT22I ATGCAT 2 cut(s) 721, 813
ErhI CCWWGG 2 cut(s) 407, 1133
FaeI CATG 9 cut(s) 137, 212, 732, 1105, 1137, 1199, 1312, 1715, 1727
FaqI GGGAC 1 cut(s) 577
FatI CATG 9 cut(s) 133, 208, 728, 1101, 1133, 1195, 1308, 1711, 1723
FauNDI CATATG 2 cut(s) 33, 153
FbaI TGATCA 2 cut(s) 28, 616
Fnu4HI GCNGC 4 cut(s) 81, 654, 1013, 1209
FokI GGATG 3 cut(s) 242, 434, 1346
Fsp4HI GCNGC 4 cut(s) 81, 654, 1013, 1209
FspBI CTAG 4 cut(s) 408, 669, 1341, 1551
GluI GCNGC 4 cut(s) 81, 654, 1013, 1209
GsuI CTGGAG 2 cut(s) 35, 673
HaeIII GGCC 2 cut(s) 1127, 1297
HgaI GACGC 1 cut(s) 1526
Hin1II CATG 9 cut(s) 137, 212, 732, 1105, 1137, 1199, 1312, 1715, 1727
HincII GTYRAC 3 cut(s) 973, 1258, 1407
HindII GTYRAC 3 cut(s) 973, 1258, 1407
HinfI GANTC 6 cut(s) 395, 1000, 1148, 1190, 1322, 1599
HpaI GTTAAC 2 cut(s) 973, 1407
HphI GGTGA 3 cut(s) 401, 1154, 1371
Hpy188I TCNGA 7 cut(s) 122, 486, 840, 911, 951, 1051, 1762
Hpy99I CGWCG 1 cut(s) 1120
HpyAV CCTTC 3 cut(s) 1392, 1796, 1805
HpyCH4III ACNGT 3 cut(s) 46, 1116, 1219
HpyCH4IV ACGT 2 cut(s) 1260, 1701
HpyF10VI GCNNNNNNNGC 3 cut(s) 500, 596, 827
HpyF3I CTNAG 3 cut(s) 948, 1048, 1324
HpySE526I ACGT 2 cut(s) 1260, 1701
Hsp92II CATG 9 cut(s) 137, 212, 732, 1105, 1137, 1199, 1312, 1715, 1727
Ksp22I TGATCA 2 cut(s) 28, 616
KspAI GTTAAC 2 cut(s) 973, 1407
LmnI GCTCC 1 cut(s) 1429
Lsp1109I GCAGC 2 cut(s) 665, 1220
LweI GCATC 7 cut(s) 63, 448, 706, 728, 798, 1195, 1704
MaeI CTAG 4 cut(s) 408, 669, 1341, 1551
MaeII ACGT 2 cut(s) 1260, 1701
MaeIII GTNAC 2 cut(s) 40, 181
MflI RGATCY 1 cut(s) 1025
MhlI GDGCHC 2 cut(s) 592, 1426
MlyI GAGTC 3 cut(s) 1157, 1316, 1593
MmeI TCCRAC 3 cut(s) 145, 934, 1525
Mph1103I ATGCAT 2 cut(s) 721, 813
MroXI GAANNNNTTC 1 cut(s) 1176
MslI CAYNNNNRTG 3 cut(s) 152, 1200, 1775
MspR9I CCNGG 3 cut(s) 558, 691, 1293
MvaI CCWGG 3 cut(s) 558, 691, 1293
MwoI GCNNNNNNNGC 3 cut(s) 500, 596, 827
NcoI CCATGG 1 cut(s) 1133
NdeI CATATG 2 cut(s) 33, 153
NlaIII CATG 9 cut(s) 137, 212, 732, 1105, 1137, 1199, 1312, 1715, 1727
NlaIV GGNNCC 1 cut(s) 801
NmeAIII GCCGAG 1 cut(s) 1612
NmuCI GTSAC 2 cut(s) 40, 181
NsiI ATGCAT 2 cut(s) 721, 813
NspI RCATGY 1 cut(s) 732
OliI CACNNNNGTG 1 cut(s) 1775
PdmI GAANNNNTTC 1 cut(s) 1176
PfeI GAWTC 3 cut(s) 395, 1000, 1190
PflMI CCANNNNNTGG 1 cut(s) 1134
PfoI TCCNGGA 1 cut(s) 556
PkrI GCNGC 4 cut(s) 82, 655, 1014, 1210
PleI GAGTC 3 cut(s) 1156, 1316, 1593
PpsI GAGTC 3 cut(s) 1156, 1316, 1593
PsiI TTATAA 2 cut(s) 1280, 1839
Psp6I CCWGG 3 cut(s) 556, 689, 1291
PspGI CCWGG 3 cut(s) 556, 689, 1291
PspN4I GGNNCC 1 cut(s) 801
PspPI GGNCC 3 cut(s) 554, 955, 1295
PstI CTGCAG 1 cut(s) 280
PstNI CAGNNNCTG 1 cut(s) 1298
PsuI RGATCY 1 cut(s) 1025
RsaI GTAC 6 cut(s) 216, 288, 940, 1214, 1313, 1477
RsaNI GTAC 6 cut(s) 215, 287, 939, 1213, 1312, 1476
RseI CAYNNNNRTG 3 cut(s) 152, 1200, 1775
SatI GCNGC 4 cut(s) 81, 654, 1013, 1209
Sau96I GGNCC 3 cut(s) 554, 955, 1295
SchI GAGTC 3 cut(s) 1157, 1316, 1593
ScrFI CCNGG 3 cut(s) 558, 691, 1293
SduI GDGCHC 2 cut(s) 592, 1426
SfaNI GCATC 7 cut(s) 63, 448, 706, 728, 798, 1195, 1704
SfcI CTRYAG 1 cut(s) 276
SinI GGWCC 2 cut(s) 554, 955
SmiMI CAYNNNNRTG 3 cut(s) 152, 1200, 1775
SmlI CTYRAG 2 cut(s) 444, 604
SmoI CTYRAG 2 cut(s) 444, 604
SsiI CCGC 2 cut(s) 80, 1012
SspI AATATT 1 cut(s) 1447
SspMI CTAG 4 cut(s) 408, 669, 1341, 1551
StyD4I CCNGG 3 cut(s) 556, 689, 1291
StyI CCWWGG 2 cut(s) 407, 1133
TaaI ACNGT 3 cut(s) 46, 1116, 1219
TaiI ACGT 2 cut(s) 1263, 1704
TaqI TCGA 1 cut(s) 1320
TatI WGTACW 2 cut(s) 286, 1311
TauI GCSGC 2 cut(s) 83, 1015
TfiI GAWTC 3 cut(s) 395, 1000, 1190
TscAI CASTG 3 cut(s) 280, 289, 408
TseFI GTSAC 2 cut(s) 40, 181
TseI GCWGC 2 cut(s) 653, 1208
Tsp45I GTSAC 2 cut(s) 40, 181
TspDTI ATGAA 7 cut(s) 24, 150, 246, 438, 455, 969, 1185
TspGWI ACGGA 2 cut(s) 336, 1318
TspRI CASTG 3 cut(s) 280, 289, 408
Van91I CCANNNNNTGG 1 cut(s) 1134
VneI GTGCAC 1 cut(s) 588
VpaK11BI GGWCC 2 cut(s) 554, 955
XapI RAATTY 5 cut(s) 233, 699, 1361, 1369, 1755
XceI RCATGY 1 cut(s) 732
XmaJI CCTAGG 1 cut(s) 407
XmnI GAANNNNTTC 1 cut(s) 1176
XspI CTAG 4 cut(s) 408, 669, 1341, 1551
Zsp2I ATGCAT 2 cut(s) 721, 813
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.