Rw4G016900

Helitron helicase-like domain at N-terminus

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000080
Physical Location & Seq
Reverse (-)
38309324 .. 38310565
1242 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G016900.1

Sequence Viewer

Length: 1161 bp
ATGACTTTGGTTCAAAAGTATGGTAGACCAGATTTGTTTATCACTATGACATGTAACCCGAATTGGGAAGAAATTAAAAGTGAGCTACTCCTTGGACAAACATCACAAAATCGTCCAGATTTAGAGGTCAGGGTATTTCGTACAAAAATTGAGCAACTAAAAGAAGACATCATCACCAAAGGGGTATTGGGAAGAGTTATTGCTCATGCTTTCGTCGTTAAATGTCAGAAATGGGGCCTACCACATGTACACATGCTGATCATGTTGGATGAAAATGATAAGCTTAATAACCCTGAAGATTATGACGGCATTGTTAGAGCAGAAATACCAGATAAAGATGAAAAGCCTCAACTTTATGATCTGGTGTTGAAACGTATGATTCACGGTCCATGTAGAACCTTAAACCAACAATCTTCATGTATGAAAAATGGGAGATGCAATAAAAGTTATCCAAAATCATTTGCAAATTTCAATGTGGAAGGAAATGATGTATATCCTATATATCGAAGACGAGCAAGTCGCTTACCAGTTGTTCCTTATAACCCGTGGTTGTTGCTACGGTATGATTGTCATATCAATGTTAAAATATGTGGGAGCATAAAAAGTGTCAAATACTTATATAAGTATGTCTACAAAGGTCCTGATAGAGTTACAGTTGAAGTGCAATCTGACTCGGAGTTCGATGAAATAGGACAATTTGTCGATGCAAGGTGTGTTTGTGCACCAGAGGCTTTATGGAGGATATTTAAGTTTGTAAAGAACAAAATATATCCAACAGTCGACAGATTACGAATACATCTTCCAAACATGCAACAAATCAGATTTGATGCAAATGAGACTGTAGAAGACATTATAGCAGACGAGCATGCACAAAAGTCTATGCTTACTGAATCTTTCACCAAGAACTGTATGGATCCGGAAGCAAGACGATATCTTAAGCACAAAGCTTGGGTGAAAAGAATGAACAACTACAAGGTAATTAGGAGAATATACAGTGTTTCACCCTCCGAATGTGAGAAATTTTACCTACGTATCCTTCTCAATCATATAAGAGGACCGAGATCATTTCGTGATTTGCTTACTATTAATGGAGTTCTGCAACCAACTTTTAAGGAAGCGGCAGAGAAACGAGGTTTGCTGGAATATGACAATAGCATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

386

Amino Acids

45.3

Weight (kDa)

9.12

Isoelectric Point (pI)

45.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Helitron_like_N PF14214 1 - 87 3.2e-29 Helitron helicase-like domain at N-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 540
AasI GACNNNNNNGTC 1 cut(s) 516
AccI GTMKAC 3 cut(s) 25, 630, 780
AccIII TCCGGA 1 cut(s) 916
AciI CCGC 1 cut(s) 1118
AclWI GGATC 2 cut(s) 908, 921
AcsI RAATTY 2 cut(s) 466, 1019
AcuI CTGAAG 1 cut(s) 315
AfaI GTAC 2 cut(s) 142, 249
AfiI CCNNNNNNNGG 1 cut(s) 64
AflII CTTAAG 1 cut(s) 935
AflIII ACRYGT 2 cut(s) 50, 244
AgsI TTSAA 4 cut(s) 14, 370, 472, 659
AhdI GACNNNNNGTC 1 cut(s) 698
AluBI AGCT 3 cut(s) 85, 283, 947
AluI AGCT 3 cut(s) 85, 283, 947
Alw21I GWGCWC 1 cut(s) 724
Alw26I GTCTC 1 cut(s) 830
Alw44I GTGCAC 1 cut(s) 720
AlwI GGATC 2 cut(s) 908, 921
Aor13HI TCCGGA 1 cut(s) 916
AoxI GGCC 1 cut(s) 235
ApaLI GTGCAC 1 cut(s) 720
ApoI RAATTY 2 cut(s) 466, 1019
ArsI GACNNNNNNTTYG 2 cut(s) 662, 694
AseI ATTAAT 1 cut(s) 1086
AspS9I GGNCC 4 cut(s) 235, 386, 638, 1055
AsuHPI GGTGA 4 cut(s) 166, 889, 964, 993
AvaII GGWCC 3 cut(s) 386, 638, 1055
BaeGI GKGCMC 1 cut(s) 724
BaeI ACNNNNGTAYC 2 cut(s) 1015, 1048
BamHI GGATCC 1 cut(s) 913
BbsI GAAGAC 3 cut(s) 171, 514, 852
Bbv12I GWGCWC 1 cut(s) 724
BceAI ACGGC 1 cut(s) 322
BciVI GTATCC 1 cut(s) 1043
BclI TGATCA 1 cut(s) 258
BcoDI GTCTC 1 cut(s) 830
BfmI CTRYAG 1 cut(s) 840
BfrI CTTAAG 1 cut(s) 935
BfuI GTATCC 1 cut(s) 1043
BisI GCNGC 1 cut(s) 1119
BlsI GCNGC 1 cut(s) 1120
Bme18I GGWCC 3 cut(s) 386, 638, 1055
BmeRI GACNNNNNGTC 1 cut(s) 698
BmgT120I GGNCC 4 cut(s) 235, 386, 638, 1055
BmiI GGNNCC 2 cut(s) 236, 915
BmsI GCATC 3 cut(s) 425, 694, 817
BpiI GAAGAC 3 cut(s) 171, 514, 852
BsaAI YACGTR 1 cut(s) 1031
BsaBI GATNNNNATC 1 cut(s) 492
BsaJI CCNNGG 2 cut(s) 91, 545
BsaWI WCCGGW 1 cut(s) 916
Bsc4I CCNNNNNNNGG 1 cut(s) 64
Bse1I ACTGG 1 cut(s) 527
Bse8I GATNNNNATC 1 cut(s) 492
BseAI TCCGGA 1 cut(s) 916
BseDI CCNNGG 2 cut(s) 91, 545
BseGI GGATG 1 cut(s) 274
BseJI GATNNNNATC 1 cut(s) 492
BseLI CCNNNNNNNGG 1 cut(s) 64
BseNI ACTGG 1 cut(s) 527
BseSI GKGCMC 1 cut(s) 724
BshFI GGCC 1 cut(s) 237
BsiHKAI GWGCWC 1 cut(s) 724
BsiSI CCGG 1 cut(s) 917
BslI CCNNNNNNNGG 1 cut(s) 64
BsmAI GTCTC 1 cut(s) 830
BsnI GGCC 1 cut(s) 237
Bsp1286I GDGCHC 1 cut(s) 724
Bsp13I TCCGGA 1 cut(s) 916
Bsp1407I TGTACA 1 cut(s) 247
Bsp143I GATC 4 cut(s) 258, 358, 913, 1061
BspACI CCGC 1 cut(s) 1118
BspANI GGCC 1 cut(s) 237
BspEI TCCGGA 1 cut(s) 916
BspLI GGNNCC 2 cut(s) 236, 915
BspPI GGATC 2 cut(s) 908, 921
BspTI CTTAAG 1 cut(s) 935
BsrGI TGTACA 1 cut(s) 247
BsrI ACTGG 1 cut(s) 527
BssECI CCNNGG 2 cut(s) 91, 545
BssMI GATC 4 cut(s) 258, 358, 913, 1061
BssT1I CCWWGG 1 cut(s) 91
Bst4CI ACNGT 7 cut(s) 386, 561, 655, 778, 841, 908, 995
Bst6I CTCTTC 1 cut(s) 187
BstAFI CTTAAG 1 cut(s) 935
BstAUI TGTACA 1 cut(s) 247
BstBAI YACGTR 1 cut(s) 1031
BstC8I GCNNGC 1 cut(s) 867
BstDSI CCRYGG 1 cut(s) 545
BstF5I GGATG 1 cut(s) 274
BstKTI GATC 4 cut(s) 261, 361, 916, 1064
BstMAI GTCTC 1 cut(s) 830
BstMBI GATC 4 cut(s) 258, 358, 913, 1061
BstMWI GCNNNNNNNGC 1 cut(s) 728
BstNSI RCATGY 5 cut(s) 54, 248, 256, 811, 869
BstSFI CTRYAG 1 cut(s) 840
BstSLI GKGCMC 1 cut(s) 724
BstSNI TACGTA 1 cut(s) 1031
BstV2I GAAGAC 3 cut(s) 171, 514, 852
BstX2I RGATCY 1 cut(s) 913
BstYI RGATCY 1 cut(s) 913
BsuI GTATCC 1 cut(s) 1043
BsuRI GGCC 1 cut(s) 237
BtgI CCRYGG 1 cut(s) 545
BtsCI GGATG 1 cut(s) 274
BtsIMutI CAGTG 1 cut(s) 1000
Cac8I GCNNGC 1 cut(s) 867
Cfr13I GGNCC 4 cut(s) 235, 386, 638, 1055
Csp6I GTAC 2 cut(s) 141, 248
CviAII CATG 9 cut(s) 51, 206, 245, 253, 262, 390, 417, 808, 866
CviJI RGCY 6 cut(s) 85, 237, 283, 346, 731, 947
CviKI_1 RGCY 6 cut(s) 85, 237, 283, 346, 731, 947
CviQI GTAC 2 cut(s) 141, 248
DpnI GATC 4 cut(s) 260, 360, 915, 1063
DpnII GATC 4 cut(s) 258, 358, 913, 1061
DrdI GACNNNNNNGTC 1 cut(s) 516
DriI GACNNNNNGTC 1 cut(s) 698
DseDI GACNNNNNNGTC 1 cut(s) 516
Eam1104I CTCTTC 1 cut(s) 187
Eam1105I GACNNNNNGTC 1 cut(s) 698
EarI CTCTTC 1 cut(s) 187
Eco105I TACGTA 1 cut(s) 1031
Eco130I CCWWGG 1 cut(s) 91
Eco32I GATATC 1 cut(s) 932
Eco47I GGWCC 3 cut(s) 386, 638, 1055
Eco57I CTGAAG 1 cut(s) 315
EcoO109I RGGNCCY 2 cut(s) 235, 638
EcoRV GATATC 1 cut(s) 932
EcoT14I CCWWGG 1 cut(s) 91
ErhI CCWWGG 1 cut(s) 91
FaeI CATG 9 cut(s) 54, 209, 248, 256, 265, 393, 420, 811, 869
FatI CATG 9 cut(s) 50, 205, 244, 252, 261, 389, 416, 807, 865
FbaI TGATCA 1 cut(s) 258
FblI GTMKAC 3 cut(s) 25, 630, 780
Fnu4HI GCNGC 1 cut(s) 1119
FokI GGATG 1 cut(s) 281
Fsp4HI GCNGC 1 cut(s) 1119
GluI GCNGC 1 cut(s) 1119
HaeIII GGCC 1 cut(s) 237
HapII CCGG 1 cut(s) 917
Hin1II CATG 9 cut(s) 54, 209, 248, 256, 265, 393, 420, 811, 869
HincII GTYRAC 1 cut(s) 781
HindII GTYRAC 1 cut(s) 781
HindIII AAGCTT 2 cut(s) 281, 945
HinfI GANTC 3 cut(s) 379, 671, 890
HpaII CCGG 1 cut(s) 917
HphI GGTGA 4 cut(s) 166, 889, 964, 993
Hpy166II GTNNAC 5 cut(s) 26, 250, 631, 722, 781
Hpy188I TCNGA 6 cut(s) 228, 670, 676, 821, 1009, 1160
Hpy188III TCNNGA 4 cut(s) 116, 641, 917, 1070
Hpy8I GTNNAC 5 cut(s) 26, 250, 631, 722, 781
Hpy99I CGWCG 1 cut(s) 218
HpyAV CCTTC 2 cut(s) 473, 1046
HpyCH4III ACNGT 7 cut(s) 386, 561, 655, 778, 841, 908, 995
HpyCH4IV ACGT 2 cut(s) 373, 1030
HpyCH4V TGCA 9 cut(s) 438, 464, 664, 707, 722, 811, 830, 869, 1099
HpyF10VI GCNNNNNNNGC 1 cut(s) 728
HpySE526I ACGT 2 cut(s) 373, 1030
Hsp92II CATG 9 cut(s) 54, 209, 248, 256, 265, 393, 420, 811, 869
Kpn2I TCCGGA 1 cut(s) 916
Ksp22I TGATCA 1 cut(s) 258
Kzo9I GATC 4 cut(s) 258, 358, 913, 1061
LmnI GCTCC 1 cut(s) 594
LweI GCATC 3 cut(s) 425, 694, 817
MaeII ACGT 2 cut(s) 373, 1030
MaeIII GTNAC 2 cut(s) 53, 649
MalI GATC 4 cut(s) 260, 360, 915, 1063
MboI GATC 4 cut(s) 258, 358, 913, 1061
MboII GAAGA 8 cut(s) 80, 176, 204, 308, 405, 519, 791, 857
MflI RGATCY 1 cut(s) 913
MhlI GDGCHC 1 cut(s) 724
MluCI AATT 7 cut(s) 61, 72, 147, 466, 695, 978, 1019
MlyI GAGTC 1 cut(s) 665
MmeI TCCRAC 2 cut(s) 246, 797
MnlI CCTC 7 cut(s) 118, 357, 721, 732, 1015, 1046, 1124
MroI TCCGGA 1 cut(s) 916
MseI TTAA 9 cut(s) 75, 219, 285, 401, 582, 747, 936, 1086, 1110
MslI CAYNNNNRTG 1 cut(s) 576
MspCI CTTAAG 1 cut(s) 935
MspI CCGG 1 cut(s) 917
MwoI GCNNNNNNNGC 1 cut(s) 728
NdeII GATC 4 cut(s) 258, 358, 913, 1061
NlaIII CATG 9 cut(s) 54, 209, 248, 256, 265, 393, 420, 811, 869
NlaIV GGNNCC 2 cut(s) 236, 915
NspI RCATGY 5 cut(s) 54, 248, 256, 811, 869
PaeI GCATGC 1 cut(s) 869
PciI ACATGT 2 cut(s) 50, 244
PfeI GAWTC 2 cut(s) 379, 890
PkrI GCNGC 1 cut(s) 1120
PleI GAGTC 1 cut(s) 665
PpsI GAGTC 1 cut(s) 665
Ppu21I YACGTR 1 cut(s) 1031
PpuMI RGGWCCY 1 cut(s) 638
PscI ACATGT 2 cut(s) 50, 244
PshBI ATTAAT 1 cut(s) 1086
PsiI TTATAA 1 cut(s) 540
Psp5II RGGWCCY 1 cut(s) 638
PspN4I GGNNCC 2 cut(s) 236, 915
PspPI GGNCC 4 cut(s) 235, 386, 638, 1055
PspPPI RGGWCCY 1 cut(s) 638
PsuI RGATCY 1 cut(s) 913
RsaI GTAC 2 cut(s) 142, 249
RsaNI GTAC 2 cut(s) 141, 248
RseI CAYNNNNRTG 1 cut(s) 576
SalI GTCGAC 1 cut(s) 779
SaqAI TTAA 9 cut(s) 75, 219, 285, 401, 582, 747, 936, 1086, 1110
SatI GCNGC 1 cut(s) 1119
Sau3AI GATC 4 cut(s) 258, 358, 913, 1061
Sau96I GGNCC 4 cut(s) 235, 386, 638, 1055
SchI GAGTC 1 cut(s) 665
SduI GDGCHC 1 cut(s) 724
SfaNI GCATC 3 cut(s) 425, 694, 817
SfcI CTRYAG 1 cut(s) 840
SinI GGWCC 3 cut(s) 386, 638, 1055
SmiMI CAYNNNNRTG 1 cut(s) 576
SmlI CTYRAG 1 cut(s) 935
SmoI CTYRAG 1 cut(s) 935
SnaBI TACGTA 1 cut(s) 1031
SphI GCATGC 1 cut(s) 869
Sse9I AATT 7 cut(s) 61, 72, 147, 466, 695, 978, 1019
SsiI CCGC 1 cut(s) 1118
StyI CCWWGG 1 cut(s) 91
TaaI ACNGT 7 cut(s) 386, 561, 655, 778, 841, 908, 995
TaiI ACGT 2 cut(s) 376, 1033
TaqI TCGA 4 cut(s) 505, 681, 702, 780
TaqII GACCGA 1 cut(s) 1072
TasI AATT 7 cut(s) 61, 72, 147, 466, 695, 978, 1019
TatI WGTACW 1 cut(s) 247
TauI GCSGC 1 cut(s) 1121
TfiI GAWTC 2 cut(s) 379, 890
Tru1I TTAA 9 cut(s) 75, 219, 285, 401, 582, 747, 936, 1086, 1110
Tru9I TTAA 9 cut(s) 75, 219, 285, 401, 582, 747, 936, 1086, 1110
TscAI CASTG 1 cut(s) 1000
TspDTI ATGAA 6 cut(s) 285, 354, 405, 437, 699, 977
TspRI CASTG 1 cut(s) 1000
Vha464I CTTAAG 1 cut(s) 935
VneI GTGCAC 1 cut(s) 720
VpaK11BI GGWCC 3 cut(s) 386, 638, 1055
VspI ATTAAT 1 cut(s) 1086
XapI RAATTY 2 cut(s) 466, 1019
XceI RCATGY 5 cut(s) 54, 248, 256, 811, 869
XcmI CCANNNNNNNNNTGG 3 cut(s) 184, 732, 907
XmiI GTMKAC 3 cut(s) 25, 630, 780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.