pycom01g00510

Belongs to the helicase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0000080
Physical Location & Seq
Forward (+)
574742 .. 582477
7736 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g00510.8

Sequence Viewer

Length: 1803 bp
ATGGCGACATCCCCCAGTAACATACAACAAGAAATTCATGGTCCCAGTAATATACAAGAACGGGTTCAGTTGGCTAACTATGATGTTGAGGTCGACCCCAGTAATATAGAACAACAAATTTCTGAACAAATTGAGCATGAAAGCGCAAATTCAAGGGTTTTGTCAGATATCACAAATTGTGATGACCAAACTTCTACTAGAATGCGTACTCATATGGGACAGTTGGCACATTCAAATAGGTCACACATATCTTATGGGATGCTCTCAATTCCTCCCCACAATGGAAGAATTGATTTACCCCCAATACAGTCCCCACCAGAAATGGTTGCTCTTTTCTCTGACCAAACAAATGAGGATAGACACTTCAGGCAAAATATTCGAGCTTACAATCATGCATTTGTATTCACTTCAATGGGAGTACACGTGGACGAAAGAATTAATATTGGTGGTCGTGGGATTTACACATTTCATGCTCAAGGTGCATTATATCATAAGATTGGTGGACTTTTACCAAATGAAGGGAACATACCGCGATTTTTACAAGCTTATATATATGACACTGAGCATGAAGTTGAAAAACGAATGTGTGAAAGTGAAGTTTTAGATAGACGTGTGGTTGAAAAGATACAACAGATGTTGAACAACCATAATCCTTTTGTTCATACATTGCGAAGCCTCGGACAACGCCAAGATTTGCCCAATTGCAAGTTGATCCTAAAAGAGCAACCAATAGATCGGCGTCAATATAGTCTACCATCAGCATCACAAGTTGCGGCAATTATAATAGATGGAGATAATGCCACAATTGCAAATGGAAGGGATATCGTGGTGGAGACAATTAGTGGAAGACTTTCTCACGTCCGAGACTATGTTGGATTTTATGATCCCTTACAATATCCACTGTTGCTGCCTTACGGTATATATGGATGGGATGTTAACAGTTGTGATGATGGTGGAAGAGCAATAACATGTTGTGACTATTATGCTTATATGTTACAGATACGCCATAATGGATCATCACTTTTGCTTCGAGGTGGACGTCTCTTGCAACAATATGTTGTAGATAACTACATTAAAATTGAATCACAAAAACTTAAATGGGTTCTTTGCATGGCTATAAGGGAGAGAATAAGAGAGAATGGGCTAGGCCCTTTGTTTTATGTCCAAAGTGAATACAAGGCCTTCAAATTCGTCCATCCTCTTGGCTCCATGGATAAGCTATCCAATCCATGCCCAAAAATGCTCCAAATGGCCTCAAAATGCACTTTCTTGCTCCCTAGGCCCTTAGAACCTGAAAACACACAAAAGAAGCACGAGAACAAATCCATAAATGATTGTGAATTTTCAGAATTTTTACTTCGTGTTGGTGATGGGAATGAAGATGTTATTATGGATGATATGGTAAAACTACCTGAATGCATGGTGATACCATGGGAGAATGAGCATTCCATTAATCAATTAATTGCCAAAATCTTCCCTGACTTAGAGGATCATATAAATGATGCAACCTACATGGTGGAAAGGGCAGTGGTAACTCCTACAAATGAAGACGTTGATATGTTGAATGAAAAGATAATCAATATGTTTCCGGGTTTAGAAGAGACAATGTATTCATTTGATTCAGTTGAGGATGACGCAAGGAATTTGTATCAGCCAGCGTTCTTGAATTCAATCTCACTTGGTGGTTTGCCTCCGCACAAGTTAACTCTGAAAAGAGGTACTCCAATCATGCTTTTAAGAAATATTGATCCGAAATTGGGATTGTGTAATGGTACAAGATTATTGTGTCGTGGTTCTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

601

Amino Acids

68.44

Weight (kDa)

5.62

Isoelectric Point (pI)

53.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 782
AatII GACGTC 1 cut(s) 1042
AccI GTMKAC 2 cut(s) 93, 751
AccII CGCG 1 cut(s) 532
AciI CCGC 3 cut(s) 530, 773, 1694
AclWI GGATC 5 cut(s) 706, 878, 1021, 1497, 1742
AcsI RAATTY 8 cut(s) 33, 117, 148, 1187, 1340, 1349, 1642, 1666
AcuI CTGAAG 1 cut(s) 349
AcvI CACGTG 1 cut(s) 424
AcyI GRCGYC 2 cut(s) 739, 1039
AdeI CACNNNGTG 1 cut(s) 1682
AfaI GTAC 4 cut(s) 208, 420, 1720, 1774
AfiI CCNNNNNNNGG 3 cut(s) 281, 518, 1757
AflIII ACRYGT 3 cut(s) 421, 610, 968
AjiI CACGTC 2 cut(s) 611, 859
AluBI AGCT 3 cut(s) 383, 545, 1219
AluI AGCT 3 cut(s) 383, 545, 1219
Alw26I GTCTC 4 cut(s) 827, 858, 1046, 1595
AlwI GGATC 5 cut(s) 706, 878, 1021, 1497, 1742
AoxI GGCC 4 cut(s) 1147, 1179, 1251, 1280
ApeKI GCWGC 1 cut(s) 907
ApoI RAATTY 8 cut(s) 33, 117, 148, 1187, 1340, 1349, 1642, 1666
AseI ATTAAT 3 cut(s) 438, 1452, 1460
Asp700I GAANNNNTTC 2 cut(s) 63, 850
AspA2I CCTAGG 1 cut(s) 1277
AspLEI GCGC 1 cut(s) 146
AspS9I GGNCC 3 cut(s) 41, 1148, 1281
AsuC2I CCSGG 1 cut(s) 1590
AsuHPI GGTGA 2 cut(s) 1379, 1435
AvaII GGWCC 1 cut(s) 41
AvrII CCTAGG 1 cut(s) 1277
BarI GAAGNNNNNNTAC 2 cut(s) 510, 542
BauI CACGAG 1 cut(s) 1313
BbrPI CACGTG 1 cut(s) 424
BbsI GAAGAC 2 cut(s) 853, 1554
BbvI GCAGC 1 cut(s) 894
BccI CCATC 6 cut(s) 763, 782, 921, 944, 1203, 1364
BcgI CGANNNNNNTGC 2 cut(s) 359, 393
BcnI CCSGG 1 cut(s) 1590
BcoDI GTCTC 4 cut(s) 827, 858, 1046, 1595
BfaI CTAG 3 cut(s) 198, 1145, 1278
BisI GCNGC 2 cut(s) 774, 908
BlnI CCTAGG 1 cut(s) 1277
BlsI GCNGC 2 cut(s) 775, 909
Bme1390I CCNGG 1 cut(s) 1590
Bme18I GGWCC 1 cut(s) 41
BmgBI CACGTC 2 cut(s) 611, 859
BmgT120I GGNCC 3 cut(s) 41, 1148, 1281
BmiI GGNNCC 2 cut(s) 43, 1207
BmrFI CCNGG 1 cut(s) 1590
BmrI ACTGGG 3 cut(s) 9, 39, 93
BmsI GCATC 3 cut(s) 249, 770, 1492
BmuI ACTGGG 3 cut(s) 9, 39, 93
BpiI GAAGAC 2 cut(s) 853, 1554
BpuEI CTTGAG 1 cut(s) 459
BpuMI CCSGG 1 cut(s) 1590
BsaAI YACGTR 1 cut(s) 424
BsaHI GRCGYC 2 cut(s) 739, 1039
BsaJI CCNNGG 4 cut(s) 676, 1209, 1277, 1430
BsaXI ACNNNNNCTCC 2 cut(s) 408, 438
Bsc4I CCNNNNNNNGG 3 cut(s) 281, 518, 1757
Bse1I ACTGG 3 cut(s) 15, 45, 99
Bse3DI GCAATG 1 cut(s) 665
BseDI CCNNGG 4 cut(s) 676, 1209, 1277, 1430
BseGI GGATG 7 cut(s) 8, 264, 932, 937, 1195, 1399, 1636
BseLI CCNNNNNNNGG 3 cut(s) 281, 518, 1757
BseMI GCAATG 1 cut(s) 665
BseMII CTCAG 1 cut(s) 552
BseNI ACTGG 3 cut(s) 15, 45, 99
BseXI GCAGC 1 cut(s) 894
Bsh1236I CGCG 1 cut(s) 532
BshFI GGCC 4 cut(s) 1149, 1181, 1253, 1282
BsiSI CCGG 1 cut(s) 1589
BslFI GGGAC 3 cut(s) 27, 231, 295
BslI CCNNNNNNNGG 3 cut(s) 281, 518, 1757
BsmAI GTCTC 4 cut(s) 827, 858, 1046, 1595
BsmBI CGTCTC 1 cut(s) 1046
BsmFI GGGAC 3 cut(s) 27, 231, 295
BsmI GAATGC 3 cut(s) 207, 1421, 1444
BsnI GGCC 4 cut(s) 1149, 1181, 1253, 1282
Bsp143I GATC 6 cut(s) 711, 733, 883, 1013, 1489, 1747
Bsp19I CCATGG 2 cut(s) 1209, 1430
BspACI CCGC 3 cut(s) 530, 773, 1694
BspANI GGCC 4 cut(s) 1149, 1181, 1253, 1282
BspCNI CTCAG 1 cut(s) 553
BspFNI CGCG 1 cut(s) 532
BspLI GGNNCC 2 cut(s) 43, 1207
BspPI GGATC 5 cut(s) 706, 878, 1021, 1497, 1742
BspQI GCTCTTC 1 cut(s) 952
BsrDI GCAATG 1 cut(s) 665
BsrI ACTGG 3 cut(s) 15, 45, 99
BssECI CCNNGG 4 cut(s) 676, 1209, 1277, 1430
BssMI GATC 6 cut(s) 711, 733, 883, 1013, 1489, 1747
BssNI GRCGYC 2 cut(s) 739, 1039
BssSI CACGAG 1 cut(s) 1313
BssT1I CCWWGG 3 cut(s) 1209, 1277, 1430
Bst2BI CACGAG 1 cut(s) 1313
Bst4CI ACNGT 5 cut(s) 222, 309, 903, 917, 941
Bst6I CTCTTC 2 cut(s) 952, 1593
BstACI GRCGYC 2 cut(s) 739, 1039
BstBAI YACGTR 1 cut(s) 424
BstC8I GCNNGC 1 cut(s) 1656
BstDEI CTNAG 3 cut(s) 561, 1285, 1483
BstDSI CCRYGG 2 cut(s) 1209, 1430
BstF5I GGATG 7 cut(s) 8, 264, 932, 937, 1195, 1399, 1636
BstFNI CGCG 1 cut(s) 532
BstHHI GCGC 1 cut(s) 146
BstKTI GATC 6 cut(s) 714, 736, 886, 1016, 1492, 1750
BstMAI GTCTC 4 cut(s) 827, 858, 1046, 1595
BstMBI GATC 6 cut(s) 711, 733, 883, 1013, 1489, 1747
BstMWI GCNNNNNNNGC 3 cut(s) 479, 806, 1279
BstNSI RCATGY 1 cut(s) 972
BstSCI CCNGG 1 cut(s) 1588
BstUI CGCG 1 cut(s) 532
BstV1I GCAGC 1 cut(s) 894
BstV2I GAAGAC 2 cut(s) 853, 1554
BstXI CCANNNNNNTGG 1 cut(s) 1202
BsuRI GGCC 4 cut(s) 1149, 1181, 1253, 1282
BtgI CCRYGG 2 cut(s) 1209, 1430
BtrI CACGTC 2 cut(s) 611, 859
BtsCI GGATG 7 cut(s) 8, 264, 932, 937, 1195, 1399, 1636
BtsI GCAGTG 1 cut(s) 1533
BtsIMutI CAGTG 3 cut(s) 558, 899, 1533
Cac8I GCNNGC 1 cut(s) 1656
CfoI GCGC 1 cut(s) 146
Cfr13I GGNCC 3 cut(s) 41, 1148, 1281
CseI GACGC 2 cut(s) 728, 1643
Csp6I GTAC 4 cut(s) 207, 419, 1719, 1773
CviQI GTAC 4 cut(s) 207, 419, 1719, 1773
DdeI CTNAG 3 cut(s) 561, 1285, 1483
DpnI GATC 6 cut(s) 713, 735, 885, 1015, 1491, 1749
DpnII GATC 6 cut(s) 711, 733, 883, 1013, 1489, 1747
DraIII CACNNNGTG 1 cut(s) 1682
Eam1104I CTCTTC 2 cut(s) 952, 1593
EarI CTCTTC 2 cut(s) 952, 1593
Eco130I CCWWGG 3 cut(s) 1209, 1277, 1430
Eco147I AGGCCT 1 cut(s) 1181
Eco32I GATATC 2 cut(s) 169, 823
Eco47I GGWCC 1 cut(s) 41
Eco57I CTGAAG 1 cut(s) 349
Eco72I CACGTG 1 cut(s) 424
EcoO109I RGGNCCY 2 cut(s) 1148, 1281
EcoRI GAATTC 1 cut(s) 1666
EcoRV GATATC 2 cut(s) 169, 823
EcoT14I CCWWGG 3 cut(s) 1209, 1277, 1430
EcoT22I ATGCAT 2 cut(s) 397, 1421
ErhI CCWWGG 3 cut(s) 1209, 1277, 1430
Esp3I CGTCTC 1 cut(s) 1046
FaqI GGGAC 3 cut(s) 27, 231, 295
FauNDI CATATG 1 cut(s) 213
FblI GTMKAC 2 cut(s) 93, 751
Fnu4HI GCNGC 2 cut(s) 774, 908
FokI GGATG 6 cut(s) 271, 939, 944, 1182, 1406, 1643
Fsp4HI GCNGC 2 cut(s) 774, 908
FspBI CTAG 3 cut(s) 198, 1145, 1278
GlaI GCGC 1 cut(s) 145
GluI GCNGC 2 cut(s) 774, 908
HaeIII GGCC 4 cut(s) 1149, 1181, 1253, 1282
HapII CCGG 1 cut(s) 1589
HgaI GACGC 2 cut(s) 728, 1643
HhaI GCGC 1 cut(s) 146
Hin1I GRCGYC 2 cut(s) 739, 1039
Hin6I GCGC 1 cut(s) 144
HinP1I GCGC 1 cut(s) 144
HincII GTYRAC 3 cut(s) 94, 937, 1704
HindII GTYRAC 3 cut(s) 94, 937, 1704
HindIII AAGCTT 1 cut(s) 543
HinfI GANTC 2 cut(s) 1082, 1619
HpaI GTTAAC 2 cut(s) 937, 1704
HpaII CCGG 1 cut(s) 1589
HphI GGTGA 2 cut(s) 1379, 1435
Hpy166II GTNNAC 8 cut(s) 94, 421, 427, 503, 752, 937, 1037, 1704
Hpy188I TCNGA 8 cut(s) 124, 166, 340, 680, 863, 1348, 1710, 1752
Hpy188III TCNNGA 1 cut(s) 1663
Hpy8I GTNNAC 8 cut(s) 94, 421, 427, 503, 752, 937, 1037, 1704
HpyAV CCTTC 3 cut(s) 512, 810, 1192
HpyCH4III ACNGT 5 cut(s) 222, 309, 903, 917, 941
HpyCH4IV ACGT 5 cut(s) 423, 610, 858, 1039, 1551
HpyCH4V TGCA 9 cut(s) 395, 482, 705, 809, 1048, 1110, 1263, 1419, 1505
HpyF10VI GCNNNNNNNGC 3 cut(s) 479, 806, 1279
HpyF3I CTNAG 3 cut(s) 561, 1285, 1483
HpySE526I ACGT 5 cut(s) 423, 610, 858, 1039, 1551
Hsp92I GRCGYC 2 cut(s) 739, 1039
HspAI GCGC 1 cut(s) 144
KspAI GTTAAC 2 cut(s) 937, 1704
Kzo9I GATC 6 cut(s) 711, 733, 883, 1013, 1489, 1747
LguI GCTCTTC 1 cut(s) 952
LmnI GCTCC 3 cut(s) 1211, 1248, 1278
Lsp1109I GCAGC 1 cut(s) 894
LweI GCATC 3 cut(s) 249, 770, 1492
MaeI CTAG 3 cut(s) 198, 1145, 1278
MaeII ACGT 5 cut(s) 423, 610, 858, 1039, 1551
MaeIII GTNAC 5 cut(s) 17, 240, 974, 993, 1531
MalI GATC 6 cut(s) 713, 735, 885, 1015, 1491, 1749
MboI GATC 6 cut(s) 711, 733, 883, 1013, 1489, 1747
MboII GAAGA 7 cut(s) 297, 858, 969, 1391, 1465, 1559, 1610
MfeI CAATTG 2 cut(s) 700, 804
MmeI TCCRAC 1 cut(s) 853
Mph1103I ATGCAT 2 cut(s) 397, 1421
MroXI GAANNNNTTC 2 cut(s) 63, 850
MseI TTAA 8 cut(s) 438, 936, 1074, 1095, 1452, 1460, 1703, 1736
MslI CAYNNNNRTG 2 cut(s) 410, 1497
MspI CCGG 1 cut(s) 1589
MspR9I CCNGG 1 cut(s) 1590
MunI CAATTG 2 cut(s) 700, 804
Mva1269I GAATGC 3 cut(s) 207, 1421, 1444
MvnI CGCG 1 cut(s) 532
MwoI GCNNNNNNNGC 3 cut(s) 479, 806, 1279
NciI CCSGG 1 cut(s) 1590
NcoI CCATGG 2 cut(s) 1209, 1430
NdeI CATATG 1 cut(s) 213
NdeII GATC 6 cut(s) 711, 733, 883, 1013, 1489, 1747
NlaIV GGNNCC 2 cut(s) 43, 1207
NmuCI GTSAC 2 cut(s) 240, 974
NsiI ATGCAT 2 cut(s) 397, 1421
NspI RCATGY 1 cut(s) 972
PceI AGGCCT 1 cut(s) 1181
PciI ACATGT 1 cut(s) 968
PciSI GCTCTTC 1 cut(s) 952
PcsI WCGNNNNNNNCGW 1 cut(s) 1036
PctI GAATGC 3 cut(s) 207, 1421, 1444
PdmI GAANNNNTTC 2 cut(s) 63, 850
PfeI GAWTC 2 cut(s) 1082, 1619
PkrI GCNGC 2 cut(s) 775, 909
PmaCI CACGTG 1 cut(s) 424
PmlI CACGTG 1 cut(s) 424
Ppu21I YACGTR 1 cut(s) 424
PscI ACATGT 1 cut(s) 968
PshBI ATTAAT 3 cut(s) 438, 1452, 1460
PsiI TTATAA 1 cut(s) 782
PspCI CACGTG 1 cut(s) 424
PspN4I GGNNCC 2 cut(s) 43, 1207
PspPI GGNCC 3 cut(s) 41, 1148, 1281
RsaI GTAC 4 cut(s) 208, 420, 1720, 1774
RsaNI GTAC 4 cut(s) 207, 419, 1719, 1773
RseI CAYNNNNRTG 2 cut(s) 410, 1497
SalI GTCGAC 1 cut(s) 92
SapI GCTCTTC 1 cut(s) 952
SaqAI TTAA 8 cut(s) 438, 936, 1074, 1095, 1452, 1460, 1703, 1736
SatI GCNGC 2 cut(s) 774, 908
Sau3AI GATC 6 cut(s) 711, 733, 883, 1013, 1489, 1747
Sau96I GGNCC 3 cut(s) 41, 1148, 1281
ScrFI CCNGG 1 cut(s) 1590
SfaNI GCATC 3 cut(s) 249, 770, 1492
SinI GGWCC 1 cut(s) 41
SmiMI CAYNNNNRTG 2 cut(s) 410, 1497
SmlI CTYRAG 1 cut(s) 474
SmoI CTYRAG 1 cut(s) 474
SseBI AGGCCT 1 cut(s) 1181
SsiI CCGC 3 cut(s) 530, 773, 1694
SspI AATATT 3 cut(s) 376, 442, 1744
SspMI CTAG 3 cut(s) 198, 1145, 1278
StuI AGGCCT 1 cut(s) 1181
StyD4I CCNGG 1 cut(s) 1588
StyI CCWWGG 3 cut(s) 1209, 1277, 1430
TaaI ACNGT 5 cut(s) 222, 309, 903, 917, 941
TaiI ACGT 5 cut(s) 426, 613, 861, 1042, 1554
TaqI TCGA 3 cut(s) 93, 379, 1030
TatI WGTACW 1 cut(s) 418
TauI GCSGC 1 cut(s) 776
TfiI GAWTC 2 cut(s) 1082, 1619
Tru1I TTAA 8 cut(s) 438, 936, 1074, 1095, 1452, 1460, 1703, 1736
Tru9I TTAA 8 cut(s) 438, 936, 1074, 1095, 1452, 1460, 1703, 1736
TscAI CASTG 3 cut(s) 565, 906, 1533
TseFI GTSAC 2 cut(s) 240, 974
TseI GCWGC 1 cut(s) 907
Tsp45I GTSAC 2 cut(s) 240, 974
TspRI CASTG 3 cut(s) 565, 906, 1533
VpaK11BI GGWCC 1 cut(s) 41
VspI ATTAAT 3 cut(s) 438, 1452, 1460
XapI RAATTY 8 cut(s) 33, 117, 148, 1187, 1340, 1349, 1642, 1666
XceI RCATGY 1 cut(s) 972
XmaJI CCTAGG 1 cut(s) 1277
XmiI GTMKAC 2 cut(s) 93, 751
XmnI GAANNNNTTC 2 cut(s) 63, 850
XspI CTAG 3 cut(s) 198, 1145, 1278
ZraI GACGTC 1 cut(s) 1040
Zsp2I ATGCAT 2 cut(s) 397, 1421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.