Belongs to the helicase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Helitron_like_N | PF14214 | 1 - 96 | 6.8e-32 | Helitron helicase-like domain at N-terminus |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 65 |
| AccB1I | GGYRCC | 1 cut(s) | 942 |
| AciI | CCGC | 1 cut(s) | 423 |
| AcoI | YGGCCR | 1 cut(s) | 89 |
| AcsI | RAATTY | 9 cut(s) | 162, 251, 334, 473, 711, 747, 899, 911, 935 |
| AcuI | CTGAAG | 1 cut(s) | 714 |
| AfaI | GTAC | 3 cut(s) | 579, 603, 823 |
| AjnI | CCWGG | 1 cut(s) | 121 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 393, 425 |
| AluBI | AGCT | 1 cut(s) | 350 |
| AluI | AGCT | 1 cut(s) | 350 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 326 |
| AoxI | GGCC | 3 cut(s) | 89, 143, 416 |
| ApoI | RAATTY | 9 cut(s) | 162, 251, 334, 473, 711, 747, 899, 911, 935 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 542, 574 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 466 |
| AspS9I | GGNCC | 1 cut(s) | 416 |
| BaeGI | GKGCMC | 1 cut(s) | 945 |
| BalI | TGGCCA | 1 cut(s) | 91 |
| BanI | GGYRCC | 1 cut(s) | 942 |
| BauI | CACGAG | 1 cut(s) | 879 |
| BccI | CCATC | 2 cut(s) | 452, 840 |
| BciT130I | CCWGG | 1 cut(s) | 123 |
| BclI | TGATCA | 1 cut(s) | 3 |
| BfaI | CTAG | 1 cut(s) | 207 |
| BglII | AGATCT | 1 cut(s) | 55 |
| Bme1390I | CCNGG | 1 cut(s) | 123 |
| BmgT120I | GGNCC | 1 cut(s) | 416 |
| BmiI | GGNNCC | 1 cut(s) | 944 |
| BmrFI | CCNGG | 1 cut(s) | 123 |
| BmsI | GCATC | 1 cut(s) | 10 |
| BsaBI | GATNNNNATC | 1 cut(s) | 372 |
| Bse1I | ACTGG | 1 cut(s) | 847 |
| Bse3DI | GCAATG | 2 cut(s) | 30, 85 |
| Bse8I | GATNNNNATC | 1 cut(s) | 372 |
| BseBI | CCWGG | 1 cut(s) | 123 |
| BseGI | GGATG | 2 cut(s) | 724, 851 |
| BseJI | GATNNNNATC | 1 cut(s) | 372 |
| BseMI | GCAATG | 2 cut(s) | 30, 85 |
| BseMII | CTCAG | 1 cut(s) | 360 |
| BseNI | ACTGG | 1 cut(s) | 847 |
| BseRI | GAGGAG | 1 cut(s) | 666 |
| BseSI | GKGCMC | 1 cut(s) | 945 |
| BshFI | GGCC | 3 cut(s) | 91, 145, 418 |
| BshNI | GGYRCC | 1 cut(s) | 942 |
| BslFI | GGGAC | 1 cut(s) | 935 |
| BsmFI | GGGAC | 1 cut(s) | 935 |
| BsnI | GGCC | 3 cut(s) | 91, 145, 418 |
| Bsp1286I | GDGCHC | 1 cut(s) | 945 |
| Bsp1407I | TGTACA | 1 cut(s) | 577 |
| Bsp143I | GATC | 3 cut(s) | 3, 55, 571 |
| BspACI | CCGC | 1 cut(s) | 423 |
| BspANI | GGCC | 3 cut(s) | 91, 145, 418 |
| BspCNI | CTCAG | 1 cut(s) | 359 |
| BspHI | TCATGA | 2 cut(s) | 405, 679 |
| BspLI | GGNNCC | 1 cut(s) | 944 |
| BspT107I | GGYRCC | 1 cut(s) | 942 |
| BsrDI | GCAATG | 2 cut(s) | 30, 85 |
| BsrGI | TGTACA | 1 cut(s) | 577 |
| BsrI | ACTGG | 1 cut(s) | 847 |
| BssMI | GATC | 3 cut(s) | 3, 55, 571 |
| BssSI | CACGAG | 1 cut(s) | 879 |
| Bst2BI | CACGAG | 1 cut(s) | 879 |
| Bst2UI | CCWGG | 1 cut(s) | 123 |
| Bst4CI | ACNGT | 2 cut(s) | 247, 322 |
| Bst6I | CTCTTC | 1 cut(s) | 254 |
| BstAUI | TGTACA | 1 cut(s) | 577 |
| BstC8I | GCNNGC | 1 cut(s) | 452 |
| BstDEI | CTNAG | 1 cut(s) | 346 |
| BstF5I | GGATG | 2 cut(s) | 724, 851 |
| BstKTI | GATC | 3 cut(s) | 6, 58, 574 |
| BstMBI | GATC | 3 cut(s) | 3, 55, 571 |
| BstNI | CCWGG | 1 cut(s) | 123 |
| BstNSI | RCATGY | 1 cut(s) | 454 |
| BstSCI | CCNGG | 1 cut(s) | 121 |
| BstSLI | GKGCMC | 1 cut(s) | 945 |
| BstX2I | RGATCY | 1 cut(s) | 55 |
| BstYI | RGATCY | 1 cut(s) | 55 |
| BsuRI | GGCC | 3 cut(s) | 91, 145, 418 |
| BtsCI | GGATG | 2 cut(s) | 724, 851 |
| BtsIMutI | CAGTG | 3 cut(s) | 327, 840, 894 |
| Cac8I | GCNNGC | 1 cut(s) | 452 |
| CaiI | CAGNNNCTG | 1 cut(s) | 326 |
| CciI | TCATGA | 2 cut(s) | 405, 679 |
| Cfr13I | GGNCC | 1 cut(s) | 416 |
| Csp6I | GTAC | 3 cut(s) | 578, 602, 822 |
| CviAII | CATG | 6 cut(s) | 275, 406, 413, 451, 575, 680 |
| CviJI | RGCY | 5 cut(s) | 91, 145, 350, 399, 418 |
| CviKI_1 | RGCY | 5 cut(s) | 91, 145, 350, 399, 418 |
| CviQI | GTAC | 3 cut(s) | 578, 602, 822 |
| DdeI | CTNAG | 1 cut(s) | 346 |
| DpnI | GATC | 3 cut(s) | 5, 57, 573 |
| DpnII | GATC | 3 cut(s) | 3, 55, 571 |
| DraI | TTTAAA | 3 cut(s) | 169, 388, 853 |
| EaeI | YGGCCR | 1 cut(s) | 89 |
| Eam1104I | CTCTTC | 1 cut(s) | 254 |
| EarI | CTCTTC | 1 cut(s) | 254 |
| Eco147I | AGGCCT | 1 cut(s) | 145 |
| Eco32I | GATATC | 1 cut(s) | 668 |
| Eco57I | CTGAAG | 1 cut(s) | 714 |
| EcoRII | CCWGG | 1 cut(s) | 121 |
| EcoRV | GATATC | 1 cut(s) | 668 |
| FaeI | CATG | 6 cut(s) | 278, 409, 416, 454, 578, 683 |
| FaqI | GGGAC | 1 cut(s) | 935 |
| FatI | CATG | 6 cut(s) | 274, 405, 412, 450, 574, 679 |
| FauNDI | CATATG | 2 cut(s) | 282, 753 |
| FbaI | TGATCA | 1 cut(s) | 3 |
| FokI | GGATG | 2 cut(s) | 711, 858 |
| FspBI | CTAG | 1 cut(s) | 207 |
| HaeIII | GGCC | 3 cut(s) | 91, 145, 418 |
| Hin1II | CATG | 6 cut(s) | 278, 409, 416, 454, 578, 683 |
| HinfI | GANTC | 6 cut(s) | 267, 409, 433, 683, 791, 800 |
| Hpy188I | TCNGA | 1 cut(s) | 258 |
| Hpy188III | TCNNGA | 9 cut(s) | 17, 53, 159, 207, 377, 406, 680, 797, 872 |
| HpyAV | CCTTC | 1 cut(s) | 738 |
| HpyCH4III | ACNGT | 2 cut(s) | 247, 322 |
| HpyCH4IV | ACGT | 1 cut(s) | 538 |
| HpyCH4V | TGCA | 4 cut(s) | 23, 78, 243, 450 |
| HpyF3I | CTNAG | 1 cut(s) | 346 |
| HpySE526I | ACGT | 1 cut(s) | 538 |
| Hsp92II | CATG | 6 cut(s) | 278, 409, 416, 454, 578, 683 |
| Ksp22I | TGATCA | 1 cut(s) | 3 |
| Kzo9I | GATC | 3 cut(s) | 3, 55, 571 |
| LpnPI | CCDG | 9 cut(s) | 66, 105, 108, 135, 159, 372, 390, 828, 885 |
| LweI | GCATC | 1 cut(s) | 10 |
| MaeI | CTAG | 1 cut(s) | 207 |
| MaeII | ACGT | 1 cut(s) | 538 |
| MaeIII | GTNAC | 1 cut(s) | 322 |
| MalI | GATC | 3 cut(s) | 5, 57, 573 |
| MboI | GATC | 3 cut(s) | 3, 55, 571 |
| MboII | GAAGA | 3 cut(s) | 149, 271, 839 |
| MflI | RGATCY | 1 cut(s) | 55 |
| MhlI | GDGCHC | 1 cut(s) | 945 |
| MlsI | TGGCCA | 1 cut(s) | 91 |
| MluNI | TGGCCA | 1 cut(s) | 91 |
| MlyI | GAGTC | 1 cut(s) | 261 |
| MmeI | TCCRAC | 1 cut(s) | 929 |
| MnlI | CCTC | 4 cut(s) | 257, 282, 687, 848 |
| Mox20I | TGGCCA | 1 cut(s) | 91 |
| MroXI | GAANNNNTTC | 1 cut(s) | 466 |
| MscI | TGGCCA | 1 cut(s) | 91 |
| MseI | TTAA | 8 cut(s) | 84, 168, 179, 201, 387, 657, 852, 887 |
| Msp20I | TGGCCA | 1 cut(s) | 91 |
| MspA1I | CMGCKG | 1 cut(s) | 350 |
| MspR9I | CCNGG | 1 cut(s) | 123 |
| MvaI | CCWGG | 1 cut(s) | 123 |
| NdeI | CATATG | 2 cut(s) | 282, 753 |
| NdeII | GATC | 3 cut(s) | 3, 55, 571 |
| NlaIII | CATG | 6 cut(s) | 278, 409, 416, 454, 578, 683 |
| NlaIV | GGNNCC | 1 cut(s) | 944 |
| NmuCI | GTSAC | 1 cut(s) | 322 |
| NspI | RCATGY | 1 cut(s) | 454 |
| PaeI | GCATGC | 1 cut(s) | 454 |
| PagI | TCATGA | 2 cut(s) | 405, 679 |
| PceI | AGGCCT | 1 cut(s) | 145 |
| PdmI | GAANNNNTTC | 1 cut(s) | 466 |
| PfeI | GAWTC | 5 cut(s) | 409, 433, 683, 791, 800 |
| PleI | GAGTC | 1 cut(s) | 261 |
| PpsI | GAGTC | 1 cut(s) | 261 |
| PsiI | TTATAA | 1 cut(s) | 65 |
| Psp6I | CCWGG | 1 cut(s) | 121 |
| PspGI | CCWGG | 1 cut(s) | 121 |
| PspN4I | GGNNCC | 1 cut(s) | 944 |
| PspPI | GGNCC | 1 cut(s) | 416 |
| PstNI | CAGNNNCTG | 1 cut(s) | 326 |
| PsuI | RGATCY | 1 cut(s) | 55 |
| PvuII | CAGCTG | 1 cut(s) | 350 |
| RsaI | GTAC | 3 cut(s) | 579, 603, 823 |
| RsaNI | GTAC | 3 cut(s) | 578, 602, 822 |
| SaqAI | TTAA | 8 cut(s) | 84, 168, 179, 201, 387, 657, 852, 887 |
| Sau3AI | GATC | 3 cut(s) | 3, 55, 571 |
| Sau96I | GGNCC | 1 cut(s) | 416 |
| SchI | GAGTC | 1 cut(s) | 261 |
| ScrFI | CCNGG | 1 cut(s) | 123 |
| SduI | GDGCHC | 1 cut(s) | 945 |
| SetI | ASST | 4 cut(s) | 124, 217, 352, 541 |
| SfaNI | GCATC | 1 cut(s) | 10 |
| SphI | GCATGC | 1 cut(s) | 454 |
| SseBI | AGGCCT | 1 cut(s) | 145 |
| SsiI | CCGC | 1 cut(s) | 423 |
| SspI | AATATT | 1 cut(s) | 99 |
| SspMI | CTAG | 1 cut(s) | 207 |
| StuI | AGGCCT | 1 cut(s) | 145 |
| StyD4I | CCNGG | 1 cut(s) | 121 |
| TaaI | ACNGT | 2 cut(s) | 247, 322 |
| TaiI | ACGT | 1 cut(s) | 541 |
| TaqI | TCGA | 1 cut(s) | 664 |
| TatI | WGTACW | 2 cut(s) | 577, 821 |
| TfiI | GAWTC | 5 cut(s) | 409, 433, 683, 791, 800 |
| Tru1I | TTAA | 8 cut(s) | 84, 168, 179, 201, 387, 657, 852, 887 |
| Tru9I | TTAA | 8 cut(s) | 84, 168, 179, 201, 387, 657, 852, 887 |
| TscAI | CASTG | 3 cut(s) | 327, 847, 901 |
| TseFI | GTSAC | 1 cut(s) | 322 |
| Tsp45I | GTSAC | 1 cut(s) | 322 |
| TspDTI | ATGAA | 9 cut(s) | 132, 394, 401, 446, 696, 704, 723, 740, 798 |
| TspRI | CASTG | 3 cut(s) | 327, 847, 901 |
| XapI | RAATTY | 9 cut(s) | 162, 251, 334, 473, 711, 747, 899, 911, 935 |
| XbaI | TCTAGA | 1 cut(s) | 206 |
| XceI | RCATGY | 1 cut(s) | 454 |
| XmnI | GAANNNNTTC | 1 cut(s) | 466 |
| XspI | CTAG | 1 cut(s) | 207 |