Rmu_sc0006101.1_g000004

G-quadruplex DNA unwinding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006101.1
OG0000080
Physical Location & Seq
Reverse (-)
25677 .. 27661
1985 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006101.1_g000004.1.cds

Sequence Viewer

Length: 1419 bp
atggagcgtgtgcgtgctcggcaccgacaatggcgagagtcaatgagttcttcacaacgtccagcatacttggcacgacgacgcgcaatagctcaagaaaagcgacccgtggtggaaactagcccaagtaacagagctgaacaagctccagaatttgacaatgaaggcacaagttcaagaatttcttcaaattccaacaaccctgaacaagactactcaagggtttgcttaactcacataagacaaatggcacgttcgaatagatcagaaacaagcgatggagtcgtccgaatttctactcgctatgaagaatttgacaatgaaggcacaagttcaagaatttcttcaaattccaacaaccctgaacaagactactcaagggtttgcttaactcacataagacaaatggcacgttcgaatagatcagaaacaagcgatggagtcgtccgaatttctactcgctatgagttacctaatgctaccatgaataatcatgaggagcataacagcaacaatgtggccatgaataatgatgaagaacataccaacaacattgaggaagacaatgaaagtgagcctatgaataatcatgaggagcgccgtaacaacattcatcaagtacggagtatgaggagggcaagaataaataataattctgctagagattttcatgaggaaatgggtgtccatgattgtcaattgcccccactaaaagcatgcccatactgcaatgcattattgtttaatcgagagacctttagtttgtgttgcttgaaggggaatattgttctaccactaatacagtctcccccagaaatggttcacctcttttctgatcaaactgatgagggcagaaaattcagacaaaatattagggcctacaacaatgtgttcgcattcacttcaatgggcgtacatgttgatgaaagaattaatatccaaggtcgtggaccttatacgtttcgtgcacaaggttctatatatcataaaattggtggtctattaccaattgacggcactgagcatgaacttgagaatagattgtctaaaagcgaagttttggagaggggaatggttgaaaagatacaacaaattcttaatcaacacaatccatttgttcagacatttcgaagtctcggacaacgtcaggatttgcccaattgcagactcatcatcagagagcaaacttccgaccgccgtcagtataatttgccatctgcatcacaggttgctgctattatagtagggggtgacgacatcaatccaaatgggagagattttattgttcaaacaattagtggacaactttggaatgtcaaagactcagttggatattatgaccccatgcagtatccatgcgtcaaggtcatgaaaatcctctacatcgaggaggacgcctcttccaacagtatgttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

472

Amino Acids

54.34

Weight (kDa)

6.45

Isoelectric Point (pI)

64.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 21
AccII CGCG 1 cut(s) 84
AciI CCGC 1 cut(s) 1195
AcoI YGGCCR 1 cut(s) 519
AcyI GRCGYC 1 cut(s) 1395
AfaI GTAC 2 cut(s) 621, 915
AfiI CCNNNNNNNGG 2 cut(s) 817, 1013
AflIII ACRYGT 1 cut(s) 916
AgsI TTSAA 8 cut(s) 177, 189, 336, 348, 775, 906, 1079, 1289
AluBI AGCT 3 cut(s) 92, 137, 146
AluI AGCT 3 cut(s) 92, 137, 146
Alw21I GWGCWC 2 cut(s) 19, 970
Alw26I GTCTC 3 cut(s) 746, 810, 1139
Alw44I GTGCAC 1 cut(s) 966
AoxI GGCC 2 cut(s) 519, 876
ApaLI GTGCAC 1 cut(s) 966
ApeKI GCWGC 1 cut(s) 1232
ArsI GACNNNNNNTTYG 2 cut(s) 745, 777
AseI ATTAAT 1 cut(s) 933
Asp700I GAANNNNTTC 3 cut(s) 184, 343, 819
AspLEI GCGC 2 cut(s) 86, 600
AspS9I GGNCC 2 cut(s) 876, 950
AsuHPI GGTGA 2 cut(s) 815, 1262
AsuII TTCGAA 3 cut(s) 257, 416, 1129
AvaII GGWCC 1 cut(s) 950
BaeGI GKGCMC 1 cut(s) 970
BalI TGGCCA 1 cut(s) 521
BanI GGYRCC 1 cut(s) 21
BbsI GAAGAC 1 cut(s) 567
Bbv12I GWGCWC 2 cut(s) 19, 970
BbvI GCAGC 1 cut(s) 1219
BccI CCATC 3 cut(s) 272, 431, 1222
BceAI ACGGC 3 cut(s) 585, 1030, 1182
BciVI GTATCC 1 cut(s) 1362
BclI TGATCA 1 cut(s) 835
BcoDI GTCTC 3 cut(s) 746, 810, 1139
BfaI CTAG 2 cut(s) 120, 660
BfoI RGCGCY 1 cut(s) 601
BfuI GTATCC 1 cut(s) 1362
BisI GCNGC 1 cut(s) 1233
BlsI GCNGC 1 cut(s) 1234
Bme18I GGWCC 1 cut(s) 950
BmgT120I GGNCC 2 cut(s) 876, 950
BmiI GGNNCC 1 cut(s) 23
BmsI GCATC 1 cut(s) 1229
BoxI GACNNNNGTC 1 cut(s) 1197
BpiI GAAGAC 1 cut(s) 567
BplI GAGNNNNNCTC 2 cut(s) 1382, 1414
BpmI CTGGAG 1 cut(s) 132
Bpu14I TTCGAA 3 cut(s) 257, 416, 1129
BpuEI CTTGAG 4 cut(s) 78, 202, 361, 1052
BsaHI GRCGYC 1 cut(s) 1395
BsaI GGTCTC 1 cut(s) 746
BsaJI CCNNGG 2 cut(s) 108, 940
Bsc4I CCNNNNNNNGG 2 cut(s) 817, 1013
Bse3DI GCAATG 1 cut(s) 736
BseDI CCNNGG 2 cut(s) 108, 940
BseLI CCNNNNNNNGG 2 cut(s) 817, 1013
BseMI GCAATG 1 cut(s) 736
BseMII CTCAG 2 cut(s) 1011, 1338
BseRI GAGGAG 4 cut(s) 512, 608, 646, 1403
BseSI GKGCMC 1 cut(s) 970
BseXI GCAGC 1 cut(s) 1219
Bsh1236I CGCG 1 cut(s) 84
Bsh1285I CGRYCG 1 cut(s) 1195
BshFI GGCC 2 cut(s) 521, 878
BshNI GGYRCC 1 cut(s) 21
BsiEI CGRYCG 1 cut(s) 1195
BsiHKAI GWGCWC 2 cut(s) 19, 970
BslI CCNNNNNNNGG 2 cut(s) 817, 1013
BsmAI GTCTC 3 cut(s) 746, 810, 1139
BsmI GAATGC 1 cut(s) 896
BsnI GGCC 2 cut(s) 521, 878
Bso31I GGTCTC 1 cut(s) 746
Bsp119I TTCGAA 3 cut(s) 257, 416, 1129
Bsp1286I GDGCHC 2 cut(s) 19, 970
Bsp143I GATC 3 cut(s) 263, 422, 835
BspACI CCGC 1 cut(s) 1195
BspANI GGCC 2 cut(s) 521, 878
BspCNI CTCAG 2 cut(s) 1012, 1337
BspFNI CGCG 1 cut(s) 84
BspHI TCATGA 4 cut(s) 493, 589, 670, 1368
BspLI GGNNCC 1 cut(s) 23
BspT104I TTCGAA 3 cut(s) 257, 416, 1129
BspT107I GGYRCC 1 cut(s) 21
BspTNI GGTCTC 1 cut(s) 746
BsrDI GCAATG 1 cut(s) 736
BssECI CCNNGG 2 cut(s) 108, 940
BssMI GATC 3 cut(s) 263, 422, 835
BssNI GRCGYC 1 cut(s) 1395
BssT1I CCWWGG 1 cut(s) 940
Bst4CI ACNGT 2 cut(s) 804, 1409
Bst6I CTCTTC 1 cut(s) 1405
BstACI GRCGYC 1 cut(s) 1395
BstBI TTCGAA 3 cut(s) 257, 416, 1129
BstC8I GCNNGC 2 cut(s) 15, 718
BstDEI CTNAG 2 cut(s) 1020, 1324
BstDSI CCRYGG 1 cut(s) 108
BstFNI CGCG 1 cut(s) 84
BstH2I RGCGCY 1 cut(s) 601
BstHHI GCGC 2 cut(s) 86, 600
BstKTI GATC 3 cut(s) 266, 425, 838
BstMAI GTCTC 3 cut(s) 746, 810, 1139
BstMBI GATC 3 cut(s) 263, 422, 835
BstMCI CGRYCG 1 cut(s) 1195
BstMWI GCNNNNNNNGC 4 cut(s) 19, 71, 143, 726
BstNSI RCATGY 2 cut(s) 720, 920
BstPAI GACNNNNGTC 1 cut(s) 1197
BstSLI GKGCMC 1 cut(s) 970
BstUI CGCG 1 cut(s) 84
BstV1I GCAGC 1 cut(s) 1219
BstV2I GAAGAC 1 cut(s) 567
BstXI CCANNNNNNTGG 1 cut(s) 947
BsuI GTATCC 1 cut(s) 1362
BsuRI GGCC 2 cut(s) 521, 878
BtgI CCRYGG 1 cut(s) 108
BtgZI GCGATG 2 cut(s) 291, 450
BtsIMutI CAGTG 1 cut(s) 1017
Cac8I GCNNGC 2 cut(s) 15, 718
CciI TCATGA 4 cut(s) 493, 589, 670, 1368
CfoI GCGC 2 cut(s) 86, 600
Cfr13I GGNCC 2 cut(s) 876, 950
CseI GACGC 3 cut(s) 90, 1348, 1403
Csp6I GTAC 2 cut(s) 620, 914
CviJI RGCY 7 cut(s) 92, 123, 137, 146, 521, 577, 878
CviKI_1 RGCY 7 cut(s) 92, 123, 137, 146, 521, 577, 878
CviQI GTAC 2 cut(s) 620, 914
DdeI CTNAG 2 cut(s) 1020, 1324
DpnI GATC 3 cut(s) 265, 424, 837
DpnII GATC 3 cut(s) 263, 422, 835
EaeI YGGCCR 1 cut(s) 519
Eam1104I CTCTTC 1 cut(s) 1405
EarI CTCTTC 1 cut(s) 1405
Eco130I CCWWGG 1 cut(s) 940
Eco31I GGTCTC 1 cut(s) 746
Eco47I GGWCC 1 cut(s) 950
EcoO109I RGGNCCY 1 cut(s) 876
EcoT14I CCWWGG 1 cut(s) 940
EcoT22I ATGCAT 1 cut(s) 736
ErhI CCWWGG 1 cut(s) 940
FalI AAGNNNNNCTT 4 cut(s) 169, 201, 328, 360
FbaI TGATCA 1 cut(s) 835
Fnu4HI GCNGC 1 cut(s) 1233
Fsp4HI GCNGC 1 cut(s) 1233
FspBI CTAG 2 cut(s) 120, 660
GlaI GCGC 2 cut(s) 85, 599
GluI GCNGC 1 cut(s) 1233
GsuI CTGGAG 1 cut(s) 132
HaeII RGCGCY 1 cut(s) 601
HaeIII GGCC 2 cut(s) 521, 878
HgaI GACGC 3 cut(s) 90, 1348, 1403
HhaI GCGC 2 cut(s) 86, 600
Hin1I GRCGYC 1 cut(s) 1395
Hin6I GCGC 2 cut(s) 84, 598
HinP1I GCGC 2 cut(s) 84, 598
HinfI GANTC 5 cut(s) 38, 282, 441, 1167, 1322
HphI GGTGA 2 cut(s) 815, 1262
Hpy166II GTNNAC 4 cut(s) 823, 950, 968, 1301
Hpy8I GTNNAC 4 cut(s) 823, 950, 968, 1301
Hpy99I CGWCG 2 cut(s) 81, 84
HpyAV CCTTC 3 cut(s) 158, 317, 769
HpyCH4III ACNGT 2 cut(s) 804, 1409
HpyCH4IV ACGT 5 cut(s) 58, 253, 412, 959, 1144
HpyCH4V TGCA 6 cut(s) 729, 734, 968, 1164, 1220, 1348
HpyF10VI GCNNNNNNNGC 4 cut(s) 19, 71, 143, 726
HpyF3I CTNAG 2 cut(s) 1020, 1324
HpySE526I ACGT 5 cut(s) 58, 253, 412, 959, 1144
Hsp92I GRCGYC 1 cut(s) 1395
HspAI GCGC 2 cut(s) 84, 598
Ksp22I TGATCA 1 cut(s) 835
Kzo9I GATC 3 cut(s) 263, 422, 835
LmnI GCTCC 4 cut(s) 4, 151, 499, 595
LpnPI CCDG 7 cut(s) 75, 162, 216, 375, 825, 1133, 1211
Lsp1109I GCAGC 1 cut(s) 1219
LweI GCATC 1 cut(s) 1229
MaeI CTAG 2 cut(s) 120, 660
MaeII ACGT 5 cut(s) 58, 253, 412, 959, 1144
MaeIII GTNAC 4 cut(s) 128, 468, 602, 1250
MalI GATC 3 cut(s) 265, 424, 837
MboI GATC 3 cut(s) 263, 422, 835
MboII GAAGA 7 cut(s) 42, 177, 320, 336, 548, 572, 1392
MfeI CAATTG 3 cut(s) 698, 1008, 1159
MhlI GDGCHC 2 cut(s) 19, 970
MlsI TGGCCA 1 cut(s) 521
MluNI TGGCCA 1 cut(s) 521
MlyI GAGTC 5 cut(s) 47, 291, 450, 1161, 1316
MmeI TCCRAC 4 cut(s) 219, 378, 1215, 1309
Mox20I TGGCCA 1 cut(s) 521
Mph1103I ATGCAT 1 cut(s) 736
MroXI GAANNNNTTC 3 cut(s) 184, 343, 819
MscI TGGCCA 1 cut(s) 521
MseI TTAA 5 cut(s) 230, 389, 744, 933, 1098
MslI CAYNNNNRTG 2 cut(s) 905, 921
Msp20I TGGCCA 1 cut(s) 521
MunI CAATTG 3 cut(s) 698, 1008, 1159
Mva1269I GAATGC 1 cut(s) 896
MvnI CGCG 1 cut(s) 84
MwoI GCNNNNNNNGC 4 cut(s) 19, 71, 143, 726
NdeII GATC 3 cut(s) 263, 422, 835
NlaIV GGNNCC 1 cut(s) 23
NmuCI GTSAC 1 cut(s) 1250
NsiI ATGCAT 1 cut(s) 736
NspI RCATGY 2 cut(s) 720, 920
NspV TTCGAA 3 cut(s) 257, 416, 1129
PaeI GCATGC 1 cut(s) 720
PagI TCATGA 4 cut(s) 493, 589, 670, 1368
PciI ACATGT 1 cut(s) 916
PctI GAATGC 1 cut(s) 896
PdmI GAANNNNTTC 3 cut(s) 184, 343, 819
PflFI GACNNNGTC 1 cut(s) 1143
PkrI GCNGC 1 cut(s) 1234
PleI GAGTC 5 cut(s) 46, 290, 449, 1161, 1316
PpsI GAGTC 5 cut(s) 46, 290, 449, 1161, 1316
PscI ACATGT 1 cut(s) 916
PshAI GACNNNNGTC 1 cut(s) 1197
PshBI ATTAAT 1 cut(s) 933
PspN4I GGNNCC 1 cut(s) 23
PspPI GGNCC 2 cut(s) 876, 950
PsyI GACNNNGTC 1 cut(s) 1143
RsaI GTAC 2 cut(s) 621, 915
RsaNI GTAC 2 cut(s) 620, 914
RseI CAYNNNNRTG 2 cut(s) 905, 921
SaqAI TTAA 5 cut(s) 230, 389, 744, 933, 1098
SatI GCNGC 1 cut(s) 1233
Sau3AI GATC 3 cut(s) 263, 422, 835
Sau96I GGNCC 2 cut(s) 876, 950
SchI GAGTC 5 cut(s) 47, 291, 450, 1161, 1316
SduI GDGCHC 2 cut(s) 19, 970
SfaNI GCATC 1 cut(s) 1229
SfuI TTCGAA 3 cut(s) 257, 416, 1129
SinI GGWCC 1 cut(s) 950
SmiMI CAYNNNNRTG 2 cut(s) 905, 921
SmlI CTYRAG 4 cut(s) 93, 217, 376, 1031
SmoI CTYRAG 4 cut(s) 93, 217, 376, 1031
SphI GCATGC 1 cut(s) 720
SsiI CCGC 1 cut(s) 1195
SspI AATATT 2 cut(s) 784, 871
SspMI CTAG 2 cut(s) 120, 660
StyI CCWWGG 1 cut(s) 940
TaaI ACNGT 2 cut(s) 804, 1409
TaiI ACGT 5 cut(s) 61, 256, 415, 962, 1147
TaqI TCGA 5 cut(s) 257, 416, 748, 1129, 1386
Tru1I TTAA 5 cut(s) 230, 389, 744, 933, 1098
Tru9I TTAA 5 cut(s) 230, 389, 744, 933, 1098
TscAI CASTG 1 cut(s) 1024
TseFI GTSAC 1 cut(s) 1250
TseI GCWGC 1 cut(s) 1232
Tsp45I GTSAC 1 cut(s) 1250
TspGWI ACGGA 1 cut(s) 637
TspRI CASTG 1 cut(s) 1024
Tth111I GACNNNGTC 1 cut(s) 1143
VneI GTGCAC 1 cut(s) 966
VpaK11BI GGWCC 1 cut(s) 950
VspI ATTAAT 1 cut(s) 933
XceI RCATGY 2 cut(s) 720, 920
XmnI GAANNNNTTC 3 cut(s) 184, 343, 819
XspI CTAG 2 cut(s) 120, 660
Zsp2I ATGCAT 1 cut(s) 736
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.