Belongs to the helicase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Pif1_2B_dom | PF21530 | 318 - 336 | 3.2e-06 | DNA helicase Pif1, 2B domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 327 |
| AccI | GTMKAC | 1 cut(s) | 249 |
| AciI | CCGC | 1 cut(s) | 141 |
| AclWI | GGATC | 2 cut(s) | 86, 1026 |
| AcsI | RAATTY | 9 cut(s) | 119, 151, 191, 275, 334, 728, 840, 910, 979 |
| AfaI | GTAC | 3 cut(s) | 209, 220, 816 |
| AgsI | TTSAA | 9 cut(s) | 16, 107, 189, 230, 333, 371, 540, 629, 839 |
| AluBI | AGCT | 2 cut(s) | 100, 437 |
| AluI | AGCT | 2 cut(s) | 100, 437 |
| Alw21I | GWGCWC | 2 cut(s) | 241, 439 |
| Alw44I | GTGCAC | 1 cut(s) | 237 |
| AlwI | GGATC | 2 cut(s) | 86, 1026 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 44 |
| Ama87I | CYCGRG | 1 cut(s) | 438 |
| ApaLI | GTGCAC | 1 cut(s) | 237 |
| ApoI | RAATTY | 9 cut(s) | 119, 151, 191, 275, 334, 728, 840, 910, 979 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 982, 1014 |
| AseI | ATTAAT | 3 cut(s) | 363, 417, 1055 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 184 |
| AspLEI | GCGC | 1 cut(s) | 811 |
| AspS9I | GGNCC | 2 cut(s) | 134, 425 |
| AsuII | TTCGAA | 1 cut(s) | 531 |
| AvaI | CYCGRG | 1 cut(s) | 438 |
| AvaII | GGWCC | 2 cut(s) | 134, 425 |
| BaeGI | GKGCMC | 1 cut(s) | 241 |
| BanII | GRGCYC | 1 cut(s) | 439 |
| BbsI | GAAGAC | 1 cut(s) | 270 |
| Bbv12I | GWGCWC | 2 cut(s) | 241, 439 |
| BccI | CCATC | 2 cut(s) | 170, 669 |
| BmcAI | AGTACT | 1 cut(s) | 220 |
| Bme18I | GGWCC | 2 cut(s) | 134, 425 |
| BmeT110I | CYCGRG | 1 cut(s) | 438 |
| BmgT120I | GGNCC | 2 cut(s) | 134, 425 |
| BmsI | GCATC | 1 cut(s) | 716 |
| BpiI | GAAGAC | 1 cut(s) | 270 |
| Bpu14I | TTCGAA | 1 cut(s) | 531 |
| Bsa29I | ATCGAT | 1 cut(s) | 632 |
| BsaAI | YACGTR | 1 cut(s) | 452 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1023 |
| BsaWI | WCCGGW | 1 cut(s) | 995 |
| Bse1I | ACTGG | 1 cut(s) | 676 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1023 |
| BseCI | ATCGAT | 1 cut(s) | 632 |
| BseGI | GGATG | 3 cut(s) | 553, 680, 757 |
| BseJI | GATNNNNATC | 1 cut(s) | 1023 |
| BseNI | ACTGG | 1 cut(s) | 676 |
| BseRI | GAGGAG | 1 cut(s) | 495 |
| BseSI | GKGCMC | 1 cut(s) | 241 |
| BsgI | GTGCAG | 1 cut(s) | 672 |
| BshVI | ATCGAT | 1 cut(s) | 632 |
| BsiHKAI | GWGCWC | 2 cut(s) | 241, 439 |
| BsiHKCI | CYCGRG | 1 cut(s) | 438 |
| BsiSI | CCGG | 1 cut(s) | 996 |
| BslFI | GGGAC | 1 cut(s) | 305 |
| BsmFI | GGGAC | 1 cut(s) | 305 |
| BsmI | GAATGC | 1 cut(s) | 963 |
| BsoBI | CYCGRG | 1 cut(s) | 438 |
| Bsp119I | TTCGAA | 1 cut(s) | 531 |
| Bsp1286I | GDGCHC | 2 cut(s) | 241, 439 |
| Bsp143I | GATC | 4 cut(s) | 91, 430, 633, 1018 |
| BspACI | CCGC | 1 cut(s) | 141 |
| BspDI | ATCGAT | 1 cut(s) | 632 |
| BspHI | TCATGA | 2 cut(s) | 123, 508 |
| BspPI | GGATC | 2 cut(s) | 86, 1026 |
| BspT104I | TTCGAA | 1 cut(s) | 531 |
| BsrI | ACTGG | 1 cut(s) | 676 |
| BssMI | GATC | 4 cut(s) | 91, 430, 633, 1018 |
| BssNAI | GTATAC | 1 cut(s) | 250 |
| Bst1107I | GTATAC | 1 cut(s) | 250 |
| BstBAI | YACGTR | 1 cut(s) | 452 |
| BstBI | TTCGAA | 1 cut(s) | 531 |
| BstC8I | GCNNGC | 1 cut(s) | 170 |
| BstDEI | CTNAG | 1 cut(s) | 738 |
| BstF5I | GGATG | 3 cut(s) | 553, 680, 757 |
| BstHHI | GCGC | 1 cut(s) | 811 |
| BstKTI | GATC | 4 cut(s) | 94, 433, 636, 1021 |
| BstMBI | GATC | 4 cut(s) | 91, 430, 633, 1018 |
| BstNSI | RCATGY | 2 cut(s) | 172, 815 |
| BstSLI | GKGCMC | 1 cut(s) | 241 |
| BstV2I | GAAGAC | 1 cut(s) | 270 |
| BstX2I | RGATCY | 1 cut(s) | 1018 |
| BstYI | RGATCY | 1 cut(s) | 1018 |
| BstZ17I | GTATAC | 1 cut(s) | 250 |
| Bsu15I | ATCGAT | 1 cut(s) | 632 |
| BsuTUI | ATCGAT | 1 cut(s) | 632 |
| BtsCI | GGATG | 3 cut(s) | 553, 680, 757 |
| Cac8I | GCNNGC | 1 cut(s) | 170 |
| CaiI | CAGNNNCTG | 1 cut(s) | 44 |
| CciI | TCATGA | 2 cut(s) | 123, 508 |
| CfoI | GCGC | 1 cut(s) | 811 |
| Cfr13I | GGNCC | 2 cut(s) | 134, 425 |
| ClaI | ATCGAT | 1 cut(s) | 632 |
| Csp6I | GTAC | 3 cut(s) | 208, 219, 815 |
| CviAII | CATG | 7 cut(s) | 124, 131, 169, 375, 509, 812, 967 |
| CviJI | RGCY | 4 cut(s) | 100, 437, 719, 830 |
| CviKI_1 | RGCY | 4 cut(s) | 100, 437, 719, 830 |
| CviQI | GTAC | 3 cut(s) | 208, 219, 815 |
| DdeI | CTNAG | 1 cut(s) | 738 |
| DpnI | GATC | 4 cut(s) | 93, 432, 635, 1020 |
| DpnII | GATC | 4 cut(s) | 91, 430, 633, 1018 |
| DraI | TTTAAA | 5 cut(s) | 156, 409, 682, 945, 984 |
| Ecl136II | GAGCTC | 1 cut(s) | 437 |
| Eco24I | GRGCYC | 1 cut(s) | 439 |
| Eco47I | GGWCC | 2 cut(s) | 134, 425 |
| Eco53kI | GAGCTC | 1 cut(s) | 437 |
| Eco88I | CYCGRG | 1 cut(s) | 438 |
| EcoICRI | GAGCTC | 1 cut(s) | 437 |
| EcoRI | GAATTC | 1 cut(s) | 119 |
| EcoT38I | GRGCYC | 1 cut(s) | 439 |
| FaeI | CATG | 7 cut(s) | 127, 134, 172, 378, 512, 815, 970 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 226, 258 |
| FaqI | GGGAC | 1 cut(s) | 305 |
| FatI | CATG | 7 cut(s) | 123, 130, 168, 374, 508, 811, 966 |
| FblI | GTMKAC | 1 cut(s) | 249 |
| FokI | GGATG | 3 cut(s) | 540, 687, 764 |
| FriOI | GRGCYC | 1 cut(s) | 439 |
| GlaI | GCGC | 1 cut(s) | 810 |
| HapII | CCGG | 1 cut(s) | 996 |
| HhaI | GCGC | 1 cut(s) | 811 |
| Hin1II | CATG | 7 cut(s) | 127, 134, 172, 378, 512, 815, 970 |
| Hin6I | GCGC | 1 cut(s) | 809 |
| HinP1I | GCGC | 1 cut(s) | 809 |
| HinfI | GANTC | 5 cut(s) | 53, 127, 371, 512, 629 |
| HpaII | CCGG | 1 cut(s) | 996 |
| Hpy166II | GTNNAC | 3 cut(s) | 239, 250, 298 |
| Hpy188I | TCNGA | 2 cut(s) | 712, 1033 |
| Hpy188III | TCNNGA | 6 cut(s) | 95, 124, 260, 428, 509, 549 |
| Hpy8I | GTNNAC | 3 cut(s) | 239, 250, 298 |
| Hpy99I | CGWCG | 1 cut(s) | 261 |
| HpyAV | CCTTC | 1 cut(s) | 252 |
| HpyCH4IV | ACGT | 2 cut(s) | 256, 451 |
| HpyCH4V | TGCA | 4 cut(s) | 168, 239, 653, 899 |
| HpyF3I | CTNAG | 1 cut(s) | 738 |
| HpySE526I | ACGT | 2 cut(s) | 256, 451 |
| Hsp92II | CATG | 7 cut(s) | 127, 134, 172, 378, 512, 815, 970 |
| HspAI | GCGC | 1 cut(s) | 809 |
| Kzo9I | GATC | 4 cut(s) | 91, 430, 633, 1018 |
| LpnPI | CCDG | 6 cut(s) | 90, 108, 441, 570, 657, 1009 |
| LweI | GCATC | 1 cut(s) | 716 |
| MaeII | ACGT | 2 cut(s) | 256, 451 |
| MalI | GATC | 4 cut(s) | 93, 432, 635, 1020 |
| MboI | GATC | 4 cut(s) | 91, 430, 633, 1018 |
| MboII | GAAGA | 3 cut(s) | 275, 668, 767 |
| MfeI | CAATTG | 1 cut(s) | 624 |
| MflI | RGATCY | 1 cut(s) | 1018 |
| MhlI | GDGCHC | 2 cut(s) | 241, 439 |
| MmeI | TCCRAC | 2 cut(s) | 749, 758 |
| MnlI | CCTC | 2 cut(s) | 516, 828 |
| MroXI | GAANNNNTTC | 1 cut(s) | 184 |
| MslI | CAYNNNNRTG | 1 cut(s) | 363 |
| MspI | CCGG | 1 cut(s) | 996 |
| MunI | CAATTG | 1 cut(s) | 624 |
| Mva1269I | GAATGC | 1 cut(s) | 963 |
| NdeII | GATC | 4 cut(s) | 91, 430, 633, 1018 |
| NlaIII | CATG | 7 cut(s) | 127, 134, 172, 378, 512, 815, 970 |
| NspI | RCATGY | 2 cut(s) | 172, 815 |
| NspV | TTCGAA | 1 cut(s) | 531 |
| PacI | TTAATTAA | 1 cut(s) | 396 |
| PaeI | GCATGC | 1 cut(s) | 172 |
| PaeR7I | CTCGAG | 1 cut(s) | 438 |
| PagI | TCATGA | 2 cut(s) | 123, 508 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 609 |
| PctI | GAATGC | 1 cut(s) | 963 |
| PdmI | GAANNNNTTC | 1 cut(s) | 184 |
| PfeI | GAWTC | 5 cut(s) | 53, 127, 371, 512, 629 |
| Ppu21I | YACGTR | 1 cut(s) | 452 |
| PshBI | ATTAAT | 3 cut(s) | 363, 417, 1055 |
| PsiI | TTATAA | 1 cut(s) | 327 |
| Psp124BI | GAGCTC | 1 cut(s) | 439 |
| PspPI | GGNCC | 2 cut(s) | 134, 425 |
| PspXI | VCTCGAGB | 1 cut(s) | 438 |
| PstNI | CAGNNNCTG | 1 cut(s) | 44 |
| PsuI | RGATCY | 1 cut(s) | 1018 |
| RsaI | GTAC | 3 cut(s) | 209, 220, 816 |
| RsaNI | GTAC | 3 cut(s) | 208, 219, 815 |
| RseI | CAYNNNNRTG | 1 cut(s) | 363 |
| SacI | GAGCTC | 1 cut(s) | 439 |
| Sau3AI | GATC | 4 cut(s) | 91, 430, 633, 1018 |
| Sau96I | GGNCC | 2 cut(s) | 134, 425 |
| ScaI | AGTACT | 1 cut(s) | 220 |
| SduI | GDGCHC | 2 cut(s) | 241, 439 |
| SetI | ASST | 9 cut(s) | 79, 102, 139, 244, 259, 427, 439, 454, 820 |
| SfaNI | GCATC | 1 cut(s) | 716 |
| Sfr274I | CTCGAG | 1 cut(s) | 438 |
| SfuI | TTCGAA | 1 cut(s) | 531 |
| SinI | GGWCC | 2 cut(s) | 134, 425 |
| SlaI | CTCGAG | 1 cut(s) | 438 |
| SmiI | ATTTAAAT | 2 cut(s) | 409, 984 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 363 |
| SmlI | CTYRAG | 1 cut(s) | 438 |
| SmoI | CTYRAG | 1 cut(s) | 438 |
| SphI | GCATGC | 1 cut(s) | 172 |
| SsiI | CCGC | 1 cut(s) | 141 |
| SspI | AATATT | 3 cut(s) | 536, 919, 1053 |
| SstI | GAGCTC | 1 cut(s) | 439 |
| SwaI | ATTTAAAT | 2 cut(s) | 409, 984 |
| TaiI | ACGT | 2 cut(s) | 259, 454 |
| TaqI | TCGA | 5 cut(s) | 433, 439, 531, 632, 802 |
| TatI | WGTACW | 1 cut(s) | 218 |
| TfiI | GAWTC | 5 cut(s) | 53, 127, 371, 512, 629 |
| TspDTI | ATGAA | 9 cut(s) | 112, 119, 483, 525, 533, 569, 768, 851, 1023 |
| TspGWI | ACGGA | 1 cut(s) | 1031 |
| VneI | GTGCAC | 1 cut(s) | 237 |
| VpaK11BI | GGWCC | 2 cut(s) | 134, 425 |
| VspI | ATTAAT | 3 cut(s) | 363, 417, 1055 |
| XapI | RAATTY | 9 cut(s) | 119, 151, 191, 275, 334, 728, 840, 910, 979 |
| XceI | RCATGY | 2 cut(s) | 172, 815 |
| XhoI | CTCGAG | 1 cut(s) | 438 |
| XmiI | GTMKAC | 1 cut(s) | 249 |
| XmnI | GAANNNNTTC | 1 cut(s) | 184 |
| ZrmI | AGTACT | 1 cut(s) | 220 |