Rw7G035690

Belongs to the helicase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
53451802 .. 53457815
6014 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G035690.1

Sequence Viewer

Length: 4161 bp
ATGGCAGCTGAAAATGCCAAGAGAGGGATAAAGAGGTTCTTAGAACCATCTACCAGTGGCAGAATTGATCAAGAAAAATCTGAATATGGTCATGTGAGACCAAAAAGATTGAAAAGAATGTTTCATCGAGAAATTGCTGGAGGATCTAATGAGTGTCGGAATGAAATGCAATTGAAAGGTGATGATGAAAACGCTGCTGAAGGGATGGCAGCTAAGGATGCCAAGAAAGGGAAAAAAAGATTGTCAAAAGAATCCACTACTAAGAGAGTTAATCAAGGAAAAACTGAACGTAGTCATGTTAGATCAAAGAGATTGAAAAGAATGTTTTGCCGAGAGATTAATGAAAAAGATAATCAATGTCAGAGTGAGACCGAATTCAGAGATCAACGTTCGCGACTATTTGGTCAAGCGTCATATCAACAAAACAGACAAGGGTTAACTGTGAAATACGAAGACTCGGGGGATAATGTGTACTCATGTAACCATTGTGATGCATGCTTTTGGCTTGGAGAAGCTACTAAAAGATCAACTTCAAATGCATCAATTATCTATACAAATTGTTGTAGGAAAGGCGAAATCAAACTTGAAAGATCAAAACCAACACCAACTTTCCTCGAGCATTTATTGAATCCAAATAATGGTTCAGAAAGCAGATCATTCAGAGAAAACATAAGAATTTATAATTCAATGTTTGCTTTTACATCAATGGGAGCAAATATTGACTACAAAATAAATAATGGTTTAGGTCCTTATGTTTTCAAAATTAGTGGTCAAGTACATCATTTAATGGGTTCTTTATTACCCTCTAATGGAGAATCTCCTAAATATGCTCAATTATATATATACGATACAAAAAATGAAGTTTCAAATCGCATTAATGCAATTGATCCGAATCACAATAATGTAAATATCAAATCAAATATAGTTGAAGGACTCATTAAAATGTTTGACCAAAATAATGAATTAGTAAAAGAATTTCGAACTATAAGAGATAGATATGAAAATGGTTTCATTCCTACGTTAAATATGACTATACTTAATCGTCAACCTACAGATAGCAAACAATATGAAATACCAACCAGTGAAGAAATCGGTGGTTTAATTGTTGGTGATATTGGACAACATAATGCAAATAAAGATTTAATTATTGAATCAAAAAGTGGTTGTTTACAACGTATTTCTAAAATACATCCAAAATACATGTCATTACAATATCCAATACTTTTTCCATATGGTGAAGATGGATATAAACCGAATTTACTAATAGAGCAAATACCTGGAAATTCTATAAAAAAAAGACAACGAATATCTATGCGAGCATACATTGCGTATCAAATCCAAGACCGAAATAATGAAGTAAAAACTTTATTAAAAGGTGGACGTTTATTTCAACAATTTTTAGTAGATTCTTATGCAACAGTTGAAGAAGACCGTTTAGATTGGATTAGAAGAAATCAAAAGAATTTTCGTAGTGAAATATATAAAGAACTTTGTACTTCAGCTTCAGCAGGAATTAATAAAGCATCCAATTTAGGACAAAAAATTATTCTACCGAGTTCTTATACTGGAAGTCCTAGAGATATGATTAATAATTATCAAGATGCTATGGCAATTTGTAGACAATACGGTAATCCTGATTTATTCATTACTTTTACTTGCAATGTTAAATGGATAGAAATTGAAAGATATTTTCAAAATCAACCTGAACATAAAATTGAAGATAGACCAGATATAATTTCAAGAATCTTTAAAATAAAATTAGAAGATATGATAAATTATATTAAATCTGGAGAACCTTTTGGAGAAATTGATGCATACGTGCATACAATAGAATTTCAAAAAAGAGGACTTCCTCATGCTCATATGTTATTTTGGTTAAAAAAGGATTATAAATGTTATACAGCCGCTGACGTTGATTCTATTATTTCAGCAGAATTACCAGATAAAAATGTAAACCCAGAATTATACAGAATTGTCAGCCAATTTATGATTCATGGACCCTGTGGAGAACTAAATTTAAAATCTCCTTGCATGCGAAATGGAAAGTGTTCTAAATTTTTTCCAAAACCATACAATCCAAATACTACATTTGAATCAAATATGCCCACTATATATAGACGTCGTGATGATCCAACAAAGTTTATATTAAAAAATGATATTCACATTGGAAATAATTTTGTTGTACCTTACAATATAAATTTGTTATTAAGATATAACGCTCATATAAATGTTGAGTTATGTTCTCAATCTATGCTAATAAAATATTTGTTTAAATATATTAACAAAGGGCCAGATCGAGCTCGAATTTTATTTCAAGAAAATTTAAAGGATGAAATCTCTGCTTATCTTAATTGTCGATATTTAACTCCTCATGAATCTGTATGGAGATTATTTGAATATTCAATTCATTCTAGGCATCCTGCTGTTCAACATTTACAAATTCATTTACCTTCGGAACAAAATATAATTTTTAATGAATGTCAATCAATTGAATCAATAATAAAGCAAAAAAGTACAGAAGATACTATGCTTACTGGATGGTTTAAAGCAAATACCATTTATCCAGAAGCAACCGAATTAACATATACAAATTTTCCAAGTAAATTCGTATGGGATGACCAGAAAAAATGTTGGACACCGAGAAAAAAATATGAAACCATTGGCCGAATAACATATATATATCCTATAGCAGGTGAATTATATTATATGAGAATGTTATTAAATATTCAAAAAGGTTGTACTAATTTCGACTCAATAAAAACAATTAATGGAATTACATATTCTTCTTATCAAGAAGCTTGCCAAAAACTTGGCTTATTAGGAGATGATAAAGAATGGGTAGAAGCTTTAGAAAATTCTTCACATACTGCAACTGCTTCTGAAATACGACAATTATTTGTTACAATTATTTTATTCTGTGATGTTGCAGATCCTCAAAAATTATTAGATTTATATTGGTCAAATATGTCAGATGACATTTTATATAAAGCTAGAGTTGACATTGGAAATCCAAACTTAATTTTACCTGATTTTGAACTGAAAAACAAAGTATTATTTGAATTAGAGCAAATATTTAATAAATCATCAAGTTCATTAAAAGATTATAAATTGCCAATGCCTGATACAAATATAGTATTTAATTCAAATGATAGACTCTTAAGAGAGGAACTAGAATATGATTGTTTTGAATTAAAACGTCAACATTTAAATATGATTGCTCAATTAAATACAAATCAAAAAATTGTGTATAATGAAGTTATAAAAGGAATTGAAGAAGGAACATGTAACACTTTTTTTGTTCATGGTTACGGAGGAACCGGTAAAACATTTTTATGGCACACAATCATAAACAAACTAAGATCAGAAGGAAAAATTGTTTTAGCTGTTGCTTCATCTGGAATTGCATCACTATTACTACCAAACGGTCGAACTGCTCATTCTCGATTTAAGATACCTTTAGTAATTAATAATTTATCAATATGTCCAATAAAAAAAGGAAGCCAACTTGCAAAATTAATTGAAAAAACCGAATTAATTATTTGGGATGAAGCTCCAATGTGTAATAAACACTGTTTTGAAGCATTAGACAAATCTTTACGTGATATTTTATCAAATCCAAATAATATCGAACATGAGAAACCATTTGGTGGTAAACCAATTTTATTAGGTGGAGATTTCAGGCAAATTTTACCTGTTATTACAGGGGGAACTAAAGAACAAATAATTGAAGTTACATTAAATAGTTCATATCTTTGGCCATTATTTAAAACATTTCATTTAACAGAAAATATGAGATTATCAAAAAAAGATTTAACTGAAGAAGATAAAAAAAATATTTCTAATTTTGCGAATTGGTTATTAGAAATTGGAGAAGGTCGTGTACATTCTATTAATTATGAAAATGATGAAGACACATCATGGGTAGAAATACCAAATGATTTACTGATTTATAACGTTAAAAATCCAATAGAGGCAATCTTTCTCACAACTTATCCGAATTTTCAAATTAAATATTGTGATTTCAATTATCTAAAAGAACGTGCAATTATTACTCCACGAAATACTACAGTTCAAGAGATAAATAATTATGCTATAAATTTATTACCAGGTAACAAAACTACCTACTTCACGAAATATTGTACTGATTATTTTTTTGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

1386

Amino Acids

160.35

Weight (kDa)

8.63

Isoelectric Point (pI)

43.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Helitron_like_N PF14214 441 - 623 5.6e-57 Helitron helicase-like domain at N-terminus
PIF1 PF05970 1074 - 1297 4.2e-92 PIF1-like helicase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 681, 1890, 3105, 3260, 3951
AarI CACCTGC 1 cut(s) 2681
AasI GACNNNNNNGTC 1 cut(s) 402
AatII GACGTC 1 cut(s) 2122
Acc36I ACCTGC 1 cut(s) 2681
AccB7I CCANNNNNTGG 2 cut(s) 638, 3647
AccI GTMKAC 1 cut(s) 1618
AccII CGCG 1 cut(s) 394
AciI CCGC 1 cut(s) 1905
AclI AACGTT 2 cut(s) 388, 3954
AclWI GGATC 4 cut(s) 151, 881, 2123, 2924
AcoI YGGCCR 2 cut(s) 2662, 3755
AcuI CTGAAG 4 cut(s) 219, 1482, 1488, 3837
AcyI GRCGYC 1 cut(s) 2119
AfaI GTAC 8 cut(s) 473, 777, 1495, 2184, 2515, 2740, 3882, 4141
AfiI CCNNNNNNNGG 6 cut(s) 24, 228, 638, 809, 2690, 3647
AflII CTTAAG 1 cut(s) 3157
AflIII ACRYGT 2 cut(s) 1200, 3281
AgeI ACCGGT 1 cut(s) 3317
AjnI CCWGG 2 cut(s) 1276, 4105
AjuI GAANNNNNNNTTGG 4 cut(s) 625, 657, 1974, 2006
Alw21I GWGCWC 1 cut(s) 2302
Alw26I GTCTC 2 cut(s) 91, 362
AlwI GGATC 4 cut(s) 151, 881, 2123, 2924
AlwNI CAGNNNCTG 1 cut(s) 1907
Ama87I CYCGRG 2 cut(s) 457, 614
AoxI GGCC 3 cut(s) 2288, 2662, 3755
ApeKI GCWGC 3 cut(s) 5, 194, 209
ArsI GACNNNNNNTTYG 2 cut(s) 1187, 1219
AseI ATTAAT 9 cut(s) 339, 876, 1515, 1587, 2766, 3465, 3515, 3533, 3891
AsiGI ACCGGT 1 cut(s) 3317
Asp700I GAANNNNTTC 1 cut(s) 2047
AspS9I GGNCC 3 cut(s) 746, 1997, 2288
AsuHPI GGTGA 4 cut(s) 191, 1121, 1247, 2705
AsuII TTCGAA 1 cut(s) 979
AvaI CYCGRG 2 cut(s) 457, 614
AvaII GGWCC 2 cut(s) 746, 1997
BalI TGGCCA 1 cut(s) 3757
BanII GRGCYC 1 cut(s) 2302
BarI GAAGNNNNNNTAC 4 cut(s) 1486, 1518, 3864, 3896
BbsI GAAGAC 3 cut(s) 459, 1434, 3915
Bbv12I GWGCWC 1 cut(s) 2302
BbvI GCAGC 3 cut(s) 17, 181, 221
BccI CCATC 4 cut(s) 55, 199, 1235, 2532
BciT130I CCWGG 2 cut(s) 1278, 4107
BclI TGATCA 1 cut(s) 67
BcoDI GTCTC 2 cut(s) 91, 362
BfaI CTAG 4 cut(s) 1575, 2412, 2991, 3170
BfmI CTRYAG 3 cut(s) 1050, 2685, 4065
BfrI CTTAAG 1 cut(s) 3157
BfuAI ACCTGC 1 cut(s) 2681
BisI GCNGC 4 cut(s) 6, 195, 210, 1905
BlsI GCNGC 4 cut(s) 7, 196, 211, 1906
Bme1390I CCNGG 2 cut(s) 1278, 4107
Bme18I GGWCC 2 cut(s) 746, 1997
BmeT110I CYCGRG 2 cut(s) 457, 614
BmgT120I GGNCC 3 cut(s) 746, 1997, 2288
BmiI GGNNCC 2 cut(s) 1999, 3316
BmrFI CCNGG 2 cut(s) 1278, 4107
BmsI GCATC 8 cut(s) 208, 481, 548, 1532, 1591, 1801, 2425, 3413
BpiI GAAGAC 3 cut(s) 459, 1434, 3915
BpmI CTGGAG 2 cut(s) 159, 1809
Bpu10I CCTNAGC 1 cut(s) 213
Bpu14I TTCGAA 1 cut(s) 979
BsaAI YACGTR 2 cut(s) 1819, 3599
BsaBI GATNNNNATC 1 cut(s) 891
BsaHI GRCGYC 1 cut(s) 2119
BsaI GGTCTC 2 cut(s) 91, 362
BsaWI WCCGGW 1 cut(s) 3317
Bsc4I CCNNNNNNNGG 6 cut(s) 24, 228, 638, 809, 2690, 3647
Bse118I RCCGGY 1 cut(s) 3317
Bse1I ACTGG 4 cut(s) 54, 1080, 1570, 2539
Bse3DI GCAATG 2 cut(s) 1323, 1666
Bse8I GATNNNNATC 1 cut(s) 891
BseBI CCWGG 2 cut(s) 1278, 4107
BseGI GGATG 9 cut(s) 210, 223, 1189, 1523, 2335, 2416, 2543, 2620, 3550
BseJI GATNNNNATC 1 cut(s) 891
BseLI CCNNNNNNNGG 6 cut(s) 24, 228, 638, 809, 2690, 3647
BseMI GCAATG 2 cut(s) 1323, 1666
BseNI ACTGG 4 cut(s) 54, 1080, 1570, 2539
BseRI GAGGAG 1 cut(s) 2358
BseXI GCAGC 3 cut(s) 17, 181, 221
Bsh1236I CGCG 1 cut(s) 394
Bsh1285I CGRYCG 1 cut(s) 3427
BshFI GGCC 3 cut(s) 2290, 2664, 3757
BshTI ACCGGT 1 cut(s) 3317
BsiEI CGRYCG 1 cut(s) 3427
BsiHKAI GWGCWC 1 cut(s) 2302
BsiHKCI CYCGRG 2 cut(s) 457, 614
BsiSI CCGG 1 cut(s) 3318
BslI CCNNNNNNNGG 6 cut(s) 24, 228, 638, 809, 2690, 3647
BsmAI GTCTC 2 cut(s) 91, 362
BsnI GGCC 3 cut(s) 2290, 2664, 3757
Bso31I GGTCTC 2 cut(s) 91, 362
BsoBI CYCGRG 2 cut(s) 457, 614
Bsp119I TTCGAA 1 cut(s) 979
Bsp1286I GDGCHC 1 cut(s) 2302
Bsp1407I TGTACA 1 cut(s) 3880
Bsp68I TCGCGA 1 cut(s) 394
BspACI CCGC 1 cut(s) 1905
BspANI GGCC 3 cut(s) 2290, 2664, 3757
BspFNI CGCG 1 cut(s) 394
BspHI TCATGA 1 cut(s) 2371
BspLI GGNNCC 2 cut(s) 1999, 3316
BspMI ACCTGC 1 cut(s) 2681
BspPI GGATC 4 cut(s) 151, 881, 2123, 2924
BspT104I TTCGAA 1 cut(s) 979
BspTI CTTAAG 1 cut(s) 3157
BspTNI GGTCTC 2 cut(s) 91, 362
BsrDI GCAATG 2 cut(s) 1323, 1666
BsrFI RCCGGY 1 cut(s) 3317
BsrGI TGTACA 1 cut(s) 3880
BsrI ACTGG 4 cut(s) 54, 1080, 1570, 2539
BssAI RCCGGY 1 cut(s) 3317
BssNI GRCGYC 1 cut(s) 2119
Bst2UI CCWGG 2 cut(s) 1278, 4107
Bst4CI ACNGT 7 cut(s) 442, 1420, 1433, 1628, 3425, 3572, 4069
BstACI GRCGYC 1 cut(s) 2119
BstAFI CTTAAG 1 cut(s) 3157
BstAPI GCANNNNNTGC 1 cut(s) 1325
BstAUI TGTACA 1 cut(s) 3880
BstBAI YACGTR 2 cut(s) 1819, 3599
BstBI TTCGAA 1 cut(s) 979
BstC8I GCNNGC 4 cut(s) 496, 1317, 2033, 2800
BstDEI CTNAG 4 cut(s) 40, 213, 261, 3356
BstENI CCTNNNNNAGG 1 cut(s) 2688
BstF5I GGATG 9 cut(s) 210, 223, 1189, 1523, 2335, 2416, 2543, 2620, 3550
BstFNI CGCG 1 cut(s) 394
BstMAI GTCTC 2 cut(s) 91, 362
BstMCI CGRYCG 1 cut(s) 3427
BstMWI GCNNNNNNNGC 3 cut(s) 14, 218, 1325
BstNI CCWGG 2 cut(s) 1278, 4107
BstNSI RCATGY 4 cut(s) 498, 1204, 2035, 3285
BstSCI CCNGG 2 cut(s) 1276, 4105
BstSFI CTRYAG 3 cut(s) 1050, 2685, 4065
BstUI CGCG 1 cut(s) 394
BstV1I GCAGC 3 cut(s) 17, 181, 221
BstV2I GAAGAC 3 cut(s) 459, 1434, 3915
BstX2I RGATCY 2 cut(s) 143, 2929
BstXI CCANNNNNNTGG 1 cut(s) 2810
BstYI RGATCY 2 cut(s) 143, 2929
BsuRI GGCC 3 cut(s) 2290, 2664, 3757
BtsCI GGATG 9 cut(s) 210, 223, 1189, 1523, 2335, 2416, 2543, 2620, 3550
BtsIMutI CAGTG 3 cut(s) 61, 1087, 3568
BtuMI TCGCGA 1 cut(s) 394
BveI ACCTGC 1 cut(s) 2681
Cac8I GCNNGC 4 cut(s) 496, 1317, 2033, 2800
CaiI CAGNNNCTG 1 cut(s) 1907
CciI TCATGA 1 cut(s) 2371
Cfr10I RCCGGY 1 cut(s) 3317
Cfr13I GGNCC 3 cut(s) 746, 1997, 2288
CseI GACGC 1 cut(s) 399
CsiI ACCWGGT 1 cut(s) 4105
Csp6I GTAC 8 cut(s) 472, 776, 1494, 2183, 2514, 2739, 3881, 4140
CspAI ACCGGT 1 cut(s) 3317
CspCI CAANNNNNGTGG 2 cut(s) 748, 783
CviQI GTAC 8 cut(s) 472, 776, 1494, 2183, 2514, 2739, 3881, 4140
DdeI CTNAG 4 cut(s) 40, 213, 261, 3356
DraI TTTAAA 7 cut(s) 1750, 2019, 2272, 2325, 2545, 3207, 3766
DrdI GACNNNNNNGTC 1 cut(s) 402
DseDI GACNNNNNNGTC 1 cut(s) 402
EaeI YGGCCR 2 cut(s) 2662, 3755
Ecl136II GAGCTC 1 cut(s) 2300
Eco24I GRGCYC 1 cut(s) 2302
Eco31I GGTCTC 2 cut(s) 91, 362
Eco47I GGWCC 2 cut(s) 746, 1997
Eco53kI GAGCTC 1 cut(s) 2300
Eco57I CTGAAG 4 cut(s) 219, 1482, 1488, 3837
Eco88I CYCGRG 2 cut(s) 457, 614
EcoICRI GAGCTC 1 cut(s) 2300
EcoNI CCTNNNNNAGG 1 cut(s) 2688
EcoO109I RGGNCCY 1 cut(s) 746
EcoRI GAATTC 1 cut(s) 374
EcoRII CCWGG 2 cut(s) 1276, 4105
EcoT22I ATGCAT 3 cut(s) 496, 541, 1816
EcoT38I GRGCYC 1 cut(s) 2302
FalI AAGNNNNNCTT 4 cut(s) 23, 55, 514, 546
FauNDI CATATG 2 cut(s) 1231, 1863
FbaI TGATCA 1 cut(s) 67
FblI GTMKAC 1 cut(s) 1618
Fnu4HI GCNGC 4 cut(s) 6, 195, 210, 1905
FokI GGATG 9 cut(s) 217, 230, 1176, 1510, 2342, 2403, 2550, 2627, 3557
FriOI GRGCYC 1 cut(s) 2302
Fsp4HI GCNGC 4 cut(s) 6, 195, 210, 1905
FspBI CTAG 4 cut(s) 1575, 2412, 2991, 3170
GluI GCNGC 4 cut(s) 6, 195, 210, 1905
GsuI CTGGAG 2 cut(s) 159, 1809
HaeIII GGCC 3 cut(s) 2290, 2664, 3757
HapII CCGG 1 cut(s) 3318
HgaI GACGC 1 cut(s) 399
Hin1I GRCGYC 1 cut(s) 2119
HincII GTYRAC 4 cut(s) 438, 1046, 2998, 3200
HindII GTYRAC 4 cut(s) 438, 1046, 2998, 3200
HindIII AAGCTT 2 cut(s) 2796, 2844
HpaI GTTAAC 1 cut(s) 438
HpaII CCGG 1 cut(s) 3318
HphI GGTGA 4 cut(s) 191, 1121, 1247, 2705
Hpy99I CGWCG 1 cut(s) 2124
HpyAV CCTTC 6 cut(s) 194, 923, 2460, 3269, 3359, 3866
HpyCH4III ACNGT 7 cut(s) 442, 1420, 1433, 1628, 3425, 3572, 4069
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 218, 1325
HpyF3I CTNAG 4 cut(s) 40, 213, 261, 3356
Hsp92I GRCGYC 1 cut(s) 2119
Ksp22I TGATCA 1 cut(s) 67
KspAI GTTAAC 1 cut(s) 438
LmnI GCTCC 2 cut(s) 710, 3556
Lsp1109I GCAGC 3 cut(s) 17, 181, 221
LweI GCATC 8 cut(s) 208, 481, 548, 1532, 1591, 1801, 2425, 3413
MabI ACCWGGT 1 cut(s) 4105
MaeI CTAG 4 cut(s) 1575, 2412, 2991, 3170
MaeIII GTNAC 6 cut(s) 479, 2899, 3284, 3305, 3730, 4109
MfeI CAATTG 3 cut(s) 170, 882, 2487
MflI RGATCY 2 cut(s) 143, 2929
MhlI GDGCHC 1 cut(s) 2302
MlsI TGGCCA 1 cut(s) 3757
MluNI TGGCCA 1 cut(s) 3757
MlyI GAGTC 4 cut(s) 449, 927, 2744, 3147
MmeI TCCRAC 3 cut(s) 137, 2156, 2612
Mox20I TGGCCA 1 cut(s) 3757
Mph1103I ATGCAT 3 cut(s) 496, 541, 1816
MroXI GAANNNNTTC 1 cut(s) 2047
MscI TGGCCA 1 cut(s) 3757
MslI CAYNNNNRTG 5 cut(s) 489, 900, 941, 2226, 3331
Msp20I TGGCCA 1 cut(s) 3757
MspA1I CMGCKG 2 cut(s) 8, 1907
MspCI CTTAAG 1 cut(s) 3157
MspI CCGG 1 cut(s) 3318
MspR9I CCNGG 2 cut(s) 1278, 4107
MunI CAATTG 3 cut(s) 170, 882, 2487
MvaI CCWGG 2 cut(s) 1278, 4107
MvnI CGCG 1 cut(s) 394
MwoI GCNNNNNNNGC 3 cut(s) 14, 218, 1325
NdeI CATATG 2 cut(s) 1231, 1863
NlaIV GGNNCC 2 cut(s) 1999, 3316
NmeAIII GCCGAG 1 cut(s) 356
NruI TCGCGA 1 cut(s) 394
NsiI ATGCAT 3 cut(s) 496, 541, 1816
NspI RCATGY 4 cut(s) 498, 1204, 2035, 3285
NspV TTCGAA 1 cut(s) 979
PaeI GCATGC 2 cut(s) 498, 2035
PaeR7I CTCGAG 1 cut(s) 614
PagI TCATGA 1 cut(s) 2371
PaqCI CACCTGC 1 cut(s) 2681
PciI ACATGT 2 cut(s) 1200, 3281
PdmI GAANNNNTTC 1 cut(s) 2047
PflMI CCANNNNNTGG 2 cut(s) 638, 3647
PinAI ACCGGT 1 cut(s) 3317
PkrI GCNGC 4 cut(s) 7, 196, 211, 1906
PleI GAGTC 4 cut(s) 449, 927, 2744, 3147
PpsI GAGTC 4 cut(s) 449, 927, 2744, 3147
Ppu21I YACGTR 2 cut(s) 1819, 3599
PpuMI RGGWCCY 1 cut(s) 746
PscI ACATGT 2 cut(s) 1200, 3281
PshBI ATTAAT 9 cut(s) 339, 876, 1515, 1587, 2766, 3465, 3515, 3533, 3891
PsiI TTATAA 5 cut(s) 681, 1890, 3105, 3260, 3951
Psp124BI GAGCTC 1 cut(s) 2302
Psp1406I AACGTT 2 cut(s) 388, 3954
Psp5II RGGWCCY 1 cut(s) 746
Psp6I CCWGG 2 cut(s) 1276, 4105
PspGI CCWGG 2 cut(s) 1276, 4105
PspN4I GGNNCC 2 cut(s) 1999, 3316
PspPI GGNCC 3 cut(s) 746, 1997, 2288
PspPPI RGGWCCY 1 cut(s) 746
PspXI VCTCGAGB 1 cut(s) 614
PstNI CAGNNNCTG 1 cut(s) 1907
PsuI RGATCY 2 cut(s) 143, 2929
PvuII CAGCTG 1 cut(s) 8
RruI TCGCGA 1 cut(s) 394
RsaI GTAC 8 cut(s) 473, 777, 1495, 2184, 2515, 2740, 3882, 4141
RsaNI GTAC 8 cut(s) 472, 776, 1494, 2183, 2514, 2739, 3881, 4140
RseI CAYNNNNRTG 5 cut(s) 489, 900, 941, 2226, 3331
SacI GAGCTC 1 cut(s) 2302
SatI GCNGC 4 cut(s) 6, 195, 210, 1905
Sau96I GGNCC 3 cut(s) 746, 1997, 2288
SchI GAGTC 4 cut(s) 449, 927, 2744, 3147
ScrFI CCNGG 2 cut(s) 1278, 4107
SduI GDGCHC 1 cut(s) 2302
SexAI ACCWGGT 1 cut(s) 4105
SfaNI GCATC 8 cut(s) 208, 481, 548, 1532, 1591, 1801, 2425, 3413
SfcI CTRYAG 3 cut(s) 1050, 2685, 4065
Sfr274I CTCGAG 1 cut(s) 614
SfuI TTCGAA 1 cut(s) 979
SinI GGWCC 2 cut(s) 746, 1997
SlaI CTCGAG 1 cut(s) 614
SmiI ATTTAAAT 1 cut(s) 3207
SmiMI CAYNNNNRTG 5 cut(s) 489, 900, 941, 2226, 3331
SmlI CTYRAG 2 cut(s) 614, 3157
SmoI CTYRAG 2 cut(s) 614, 3157
SphI GCATGC 2 cut(s) 498, 2035
SsiI CCGC 1 cut(s) 1905
SspI AATATT 8 cut(s) 718, 2264, 2399, 2725, 3072, 3835, 4013, 4136
SspMI CTAG 4 cut(s) 1575, 2412, 2991, 3170
SstI GAGCTC 1 cut(s) 2302
StyD4I CCNGG 2 cut(s) 1276, 4105
SwaI ATTTAAAT 1 cut(s) 3207
TaaI ACNGT 7 cut(s) 442, 1420, 1433, 1628, 3425, 3572, 4069
TaqII GACCGA 2 cut(s) 386, 1359
TatI WGTACW 7 cut(s) 471, 775, 1493, 2513, 2738, 3880, 4139
TauI GCSGC 1 cut(s) 1907
TscAI CASTG 3 cut(s) 61, 1087, 3575
TseI GCWGC 3 cut(s) 5, 194, 209
TspGWI ACGGA 1 cut(s) 3324
TspRI CASTG 3 cut(s) 61, 1087, 3575
Van91I CCANNNNNTGG 2 cut(s) 638, 3647
Vha464I CTTAAG 1 cut(s) 3157
VpaK11BI GGWCC 2 cut(s) 746, 1997
VspI ATTAAT 9 cut(s) 339, 876, 1515, 1587, 2766, 3465, 3515, 3533, 3891
XagI CCTNNNNNAGG 1 cut(s) 2688
XceI RCATGY 4 cut(s) 498, 1204, 2035, 3285
XhoI CTCGAG 1 cut(s) 614
XmiI GTMKAC 1 cut(s) 1618
XmnI GAANNNNTTC 1 cut(s) 2047
XspI CTAG 4 cut(s) 1575, 2412, 2991, 3170
ZraI GACGTC 1 cut(s) 2120
Zsp2I ATGCAT 3 cut(s) 496, 541, 1816
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.