Ribosomal RNA small subunit methyltransferase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| EMG1 | PF03587 | 2 - 51 | 4.6e-15 | EMG1/NEP1 methyltransferase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 268 |
| AdeI | CACNNNGTG | 1 cut(s) | 200 |
| AgsI | TTSAA | 1 cut(s) | 296 |
| AjnI | CCWGG | 1 cut(s) | 12 |
| AluBI | AGCT | 2 cut(s) | 41, 251 |
| AluI | AGCT | 2 cut(s) | 41, 251 |
| AoxI | GGCC | 1 cut(s) | 268 |
| AseI | ATTAAT | 1 cut(s) | 33 |
| BalI | TGGCCA | 1 cut(s) | 270 |
| BccI | CCATC | 1 cut(s) | 71 |
| BceAI | ACGGC | 1 cut(s) | 260 |
| BciT130I | CCWGG | 1 cut(s) | 14 |
| BciVI | GTATCC | 1 cut(s) | 122 |
| BfaI | CTAG | 1 cut(s) | 42 |
| BfuI | GTATCC | 1 cut(s) | 122 |
| Bme1390I | CCNGG | 1 cut(s) | 14 |
| BmrFI | CCNGG | 1 cut(s) | 14 |
| BmsI | GCATC | 1 cut(s) | 164 |
| BsaJI | CCNNGG | 2 cut(s) | 72, 116 |
| BseBI | CCWGG | 1 cut(s) | 14 |
| BseDI | CCNNGG | 2 cut(s) | 72, 116 |
| BseGI | GGATG | 2 cut(s) | 82, 242 |
| BseYI | CCCAGC | 1 cut(s) | 251 |
| BshFI | GGCC | 1 cut(s) | 270 |
| BslFI | GGGAC | 3 cut(s) | 268, 313, 341 |
| BsmFI | GGGAC | 3 cut(s) | 268, 313, 341 |
| BsnI | GGCC | 1 cut(s) | 270 |
| BspANI | GGCC | 1 cut(s) | 270 |
| BssECI | CCNNGG | 2 cut(s) | 72, 116 |
| BssT1I | CCWWGG | 1 cut(s) | 116 |
| Bst2UI | CCWGG | 1 cut(s) | 14 |
| Bst4CI | ACNGT | 1 cut(s) | 304 |
| BstC8I | GCNNGC | 1 cut(s) | 249 |
| BstF5I | GGATG | 2 cut(s) | 82, 242 |
| BstNI | CCWGG | 1 cut(s) | 14 |
| BstSCI | CCNGG | 1 cut(s) | 12 |
| BsuI | GTATCC | 1 cut(s) | 122 |
| BsuRI | GGCC | 1 cut(s) | 270 |
| BtgZI | GCGATG | 2 cut(s) | 67, 141 |
| BtsCI | GGATG | 2 cut(s) | 82, 242 |
| Cac8I | GCNNGC | 1 cut(s) | 249 |
| CviAII | CATG | 3 cut(s) | 145, 220, 308 |
| CviJI | RGCY | 6 cut(s) | 5, 27, 41, 251, 270, 275 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 27, 41, 251, 270, 275 |
| DraIII | CACNNNGTG | 1 cut(s) | 200 |
| EaeI | YGGCCR | 1 cut(s) | 268 |
| Eco130I | CCWWGG | 1 cut(s) | 116 |
| EcoRII | CCWGG | 1 cut(s) | 12 |
| EcoT14I | CCWWGG | 1 cut(s) | 116 |
| ErhI | CCWWGG | 1 cut(s) | 116 |
| FaeI | CATG | 3 cut(s) | 148, 223, 311 |
| FaiI | YATR | 9 cut(s) | 63, 65, 103, 105, 146, 221, 280, 309, 337 |
| FaqI | GGGAC | 3 cut(s) | 268, 313, 341 |
| FatI | CATG | 3 cut(s) | 144, 219, 307 |
| FauNDI | CATATG | 1 cut(s) | 103 |
| FokI | GGATG | 2 cut(s) | 89, 249 |
| FspBI | CTAG | 1 cut(s) | 42 |
| GsaI | CCCAGC | 1 cut(s) | 255 |
| HaeIII | GGCC | 1 cut(s) | 270 |
| Hin1II | CATG | 3 cut(s) | 148, 223, 311 |
| HinfI | GANTC | 1 cut(s) | 362 |
| Hpy166II | GTNNAC | 2 cut(s) | 83, 242 |
| Hpy188I | TCNGA | 1 cut(s) | 172 |
| Hpy8I | GTNNAC | 2 cut(s) | 83, 242 |
| HpyAV | CCTTC | 1 cut(s) | 175 |
| HpyCH4III | ACNGT | 1 cut(s) | 304 |
| HpyCH4IV | ACGT | 1 cut(s) | 122 |
| HpyCH4V | TGCA | 2 cut(s) | 219, 307 |
| HpySE526I | ACGT | 1 cut(s) | 122 |
| Hsp92II | CATG | 3 cut(s) | 148, 223, 311 |
| LpnPI | CCDG | 3 cut(s) | 26, 123, 237 |
| LweI | GCATC | 1 cut(s) | 164 |
| MaeI | CTAG | 1 cut(s) | 42 |
| MaeII | ACGT | 1 cut(s) | 122 |
| MlsI | TGGCCA | 1 cut(s) | 270 |
| MluCI | AATT | 2 cut(s) | 226, 264 |
| MluNI | TGGCCA | 1 cut(s) | 270 |
| MnlI | CCTC | 4 cut(s) | 20, 67, 171, 286 |
| Mox20I | TGGCCA | 1 cut(s) | 270 |
| MscI | TGGCCA | 1 cut(s) | 270 |
| MseI | TTAA | 4 cut(s) | 33, 96, 126, 188 |
| Msp20I | TGGCCA | 1 cut(s) | 270 |
| MspR9I | CCNGG | 1 cut(s) | 14 |
| MvaI | CCWGG | 1 cut(s) | 14 |
| NdeI | CATATG | 1 cut(s) | 103 |
| NlaIII | CATG | 3 cut(s) | 148, 223, 311 |
| PfeI | GAWTC | 1 cut(s) | 362 |
| PshBI | ATTAAT | 1 cut(s) | 33 |
| Psp6I | CCWGG | 1 cut(s) | 12 |
| PspFI | CCCAGC | 1 cut(s) | 251 |
| PspGI | CCWGG | 1 cut(s) | 12 |
| SaqAI | TTAA | 4 cut(s) | 33, 96, 126, 188 |
| ScrFI | CCNGG | 1 cut(s) | 14 |
| SetI | ASST | 4 cut(s) | 43, 125, 202, 253 |
| SfaNI | GCATC | 1 cut(s) | 164 |
| Sse9I | AATT | 2 cut(s) | 226, 264 |
| SspMI | CTAG | 1 cut(s) | 42 |
| StyD4I | CCNGG | 1 cut(s) | 12 |
| StyI | CCWWGG | 1 cut(s) | 116 |
| TaaI | ACNGT | 1 cut(s) | 304 |
| TaiI | ACGT | 1 cut(s) | 125 |
| TaqII | GACCGA | 1 cut(s) | 86 |
| TasI | AATT | 2 cut(s) | 226, 264 |
| TfiI | GAWTC | 1 cut(s) | 362 |
| Tru1I | TTAA | 4 cut(s) | 33, 96, 126, 188 |
| Tru9I | TTAA | 4 cut(s) | 33, 96, 126, 188 |
| TspDTI | ATGAA | 2 cut(s) | 236, 375 |
| VspI | ATTAAT | 1 cut(s) | 33 |
| XspI | CTAG | 1 cut(s) | 42 |