Rmu_sc0004301.1_g000006

Belongs to the helicase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004301.1
OG0000080
Physical Location & Seq
Reverse (-)
20772 .. 25334
4563 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004301.1_g000006.1.cds

Sequence Viewer

Length: 942 bp
atggatgtcgaattaccgttgagtgcaaagataatgatttttgggggagattttcgtcaagttctccctgttattcctaaaggaacgaagtctgaactcattcaagcctccattgtgaaagtaacattttgggcacaaacaaagatattgagattgagacagaatatgagatctataaatgaccaccaatttgcagaatttctacttcgtgttggcgatgggagtgaacaagtcattaacgacaaaatgatgaggttaccagaatgcatggtggttccatgggaaagtgatcaatctatcaatcaaattattgatgaagttttccccaatttgggtgatcatgtaaataatgtaagatacatggtggacagagcattgattacccctataaacgatgatgtggacgtgttgaatgaaaagataatcaatatgtttccaggtgaagaaattacattgtactcatttgactctgttgaagatggcatgagaaatttgtaccaaccagagtttctgaactcaataaccgaaggtgggctgccactccacaagttaactttgaaagtaggtgctccaatcatgcttttaaggaatattgaccctaaattgggattgtgtaacggtactagattgctgtgtcatggttcgtaccaaaatctgatttatgctgagatactaacaggacagtttgctgggactagagtttttctacctagaattcctttgaaaagtgcagaaaatgctgggctaccatttcaactaacaagaaaaaaaatcccacatgggcatgacagccgccattgctgcctctggtgccgccggcgacctagggccgccattgtcccccttgacaacgccatagaaggcgtcacccatggccatgatgccatagatgtcaatccccatggccatggcgccatggatcctatggtcctaacgccatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

313

Amino Acids

35.23

Weight (kDa)

6.26

Isoelectric Point (pI)

39.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 810, 911
AciI CCGC 3 cut(s) 793, 814, 831
AclWI GGATC 2 cut(s) 914, 927
AcoI YGGCCR 2 cut(s) 874, 904
AcsI RAATTY 3 cut(s) 197, 490, 714
AcyI GRCGYC 2 cut(s) 864, 912
AfaI GTAC 4 cut(s) 458, 497, 622, 647
AfiI CCNNNNNNNGG 5 cut(s) 331, 332, 531, 604, 605
AflIII ACRYGT 1 cut(s) 405
AgsI TTSAA 6 cut(s) 104, 412, 476, 559, 724, 755
AjiI CACGTC 1 cut(s) 406
AjnI CCWGG 1 cut(s) 436
AjuI GAANNNNNNNTTGG 2 cut(s) 492, 524
Alw21I GWGCWC 1 cut(s) 571
Alw26I GTCTC 1 cut(s) 151
AlwI GGATC 2 cut(s) 914, 927
AoxI GGCC 3 cut(s) 828, 874, 904
ApeKI GCWGC 2 cut(s) 535, 801
ApoI RAATTY 3 cut(s) 197, 490, 714
ArsI GACNNNNNNTTYG 2 cut(s) 173, 205
Asp700I GAANNNNTTC 1 cut(s) 99
AspA2I CCTAGG 1 cut(s) 824
AspLEI GCGC 1 cut(s) 914
AspS9I GGNCC 2 cut(s) 828, 928
AsuHPI GGTGA 3 cut(s) 347, 452, 859
AvaII GGWCC 1 cut(s) 928
AvrII CCTAGG 1 cut(s) 824
BaeGI GKGCMC 1 cut(s) 136
BalI TGGCCA 2 cut(s) 876, 906
BamHI GGATCC 1 cut(s) 919
BanI GGYRCC 2 cut(s) 810, 911
Bbv12I GWGCWC 1 cut(s) 571
BbvI GCAGC 2 cut(s) 522, 788
BccI CCATC 2 cut(s) 212, 473
BciT130I CCWGG 1 cut(s) 438
BclI TGATCA 2 cut(s) 289, 337
BcoDI GTCTC 1 cut(s) 151
BfaI CTAG 4 cut(s) 624, 696, 711, 825
BfoI RGCGCY 1 cut(s) 915
BglII AGATCT 1 cut(s) 170
BisI GCNGC 5 cut(s) 536, 793, 802, 814, 831
BlnI CCTAGG 1 cut(s) 824
BlsI GCNGC 5 cut(s) 537, 794, 803, 815, 832
Bme1390I CCNGG 1 cut(s) 438
Bme18I GGWCC 1 cut(s) 928
BmgBI CACGTC 1 cut(s) 406
BmgT120I GGNCC 2 cut(s) 828, 928
BmiI GGNNCC 4 cut(s) 276, 812, 913, 921
BmrFI CCNGG 1 cut(s) 438
BmsI GCATC 1 cut(s) 871
BsaBI GATNNNNATC 1 cut(s) 894
BsaHI GRCGYC 2 cut(s) 864, 912
BsaJI CCNNGG 6 cut(s) 278, 824, 871, 901, 907, 915
Bsc4I CCNNNNNNNGG 5 cut(s) 331, 332, 531, 604, 605
Bse118I RCCGGY 1 cut(s) 816
Bse3DI GCAATG 1 cut(s) 796
Bse8I GATNNNNATC 1 cut(s) 894
BseBI CCWGG 1 cut(s) 438
BseDI CCNNGG 6 cut(s) 278, 824, 871, 901, 907, 915
BseGI GGATG 1 cut(s) 10
BseJI GATNNNNATC 1 cut(s) 894
BseLI CCNNNNNNNGG 5 cut(s) 331, 332, 531, 604, 605
BseMI GCAATG 1 cut(s) 796
BseMII CTCAG 1 cut(s) 657
BseSI GKGCMC 1 cut(s) 136
BseXI GCAGC 2 cut(s) 522, 788
BseYI CCCAGC 2 cut(s) 689, 740
BsgI GTGCAG 1 cut(s) 750
BshFI GGCC 3 cut(s) 830, 876, 906
BshNI GGYRCC 2 cut(s) 810, 911
BsiHKAI GWGCWC 1 cut(s) 571
BsiSI CCGG 1 cut(s) 817
BslFI GGGAC 2 cut(s) 706, 824
BslI CCNNNNNNNGG 5 cut(s) 331, 332, 531, 604, 605
BsmAI GTCTC 1 cut(s) 151
BsmFI GGGAC 2 cut(s) 706, 824
BsmI GAATGC 1 cut(s) 269
BsnI GGCC 3 cut(s) 830, 876, 906
Bsp1286I GDGCHC 2 cut(s) 136, 571
Bsp143I GATC 4 cut(s) 170, 289, 337, 919
Bsp19I CCATGG 5 cut(s) 278, 871, 901, 907, 915
BspACI CCGC 3 cut(s) 793, 814, 831
BspANI GGCC 3 cut(s) 830, 876, 906
BspCNI CTCAG 1 cut(s) 658
BspLI GGNNCC 4 cut(s) 276, 812, 913, 921
BspPI GGATC 2 cut(s) 914, 927
BspT107I GGYRCC 2 cut(s) 810, 911
BsrDI GCAATG 1 cut(s) 796
BsrFI RCCGGY 1 cut(s) 816
BssAI RCCGGY 1 cut(s) 816
BssECI CCNNGG 6 cut(s) 278, 824, 871, 901, 907, 915
BssMI GATC 4 cut(s) 170, 289, 337, 919
BssNI GRCGYC 2 cut(s) 864, 912
BssT1I CCWWGG 6 cut(s) 278, 824, 871, 901, 907, 915
Bst2UI CCWGG 1 cut(s) 438
Bst4CI ACNGT 3 cut(s) 18, 620, 684
BstACI GRCGYC 2 cut(s) 864, 912
BstAPI GCANNNNNTGC 1 cut(s) 737
BstC8I GCNNGC 1 cut(s) 818
BstDEI CTNAG 1 cut(s) 666
BstDSI CCRYGG 5 cut(s) 278, 871, 901, 907, 915
BstEII GGTNACC 1 cut(s) 255
BstF5I GGATG 1 cut(s) 10
BstH2I RGCGCY 1 cut(s) 915
BstHHI GCGC 1 cut(s) 914
BstKTI GATC 4 cut(s) 173, 292, 340, 922
BstMAI GTCTC 1 cut(s) 151
BstMBI GATC 4 cut(s) 170, 289, 337, 919
BstMWI GCNNNNNNNGC 4 cut(s) 737, 798, 801, 810
BstNI CCWGG 1 cut(s) 438
BstPI GGTNACC 1 cut(s) 255
BstSCI CCNGG 1 cut(s) 436
BstSLI GKGCMC 1 cut(s) 136
BstV1I GCAGC 2 cut(s) 522, 788
BstX2I RGATCY 2 cut(s) 170, 919
BstXI CCANNNNNNTGG 1 cut(s) 908
BstYI RGATCY 2 cut(s) 170, 919
BsuRI GGCC 3 cut(s) 830, 876, 906
BtgI CCRYGG 5 cut(s) 278, 871, 901, 907, 915
BtgZI GCGATG 1 cut(s) 231
BtrI CACGTC 1 cut(s) 406
BtsCI GGATG 1 cut(s) 10
Cac8I GCNNGC 1 cut(s) 818
CfoI GCGC 1 cut(s) 914
Cfr10I RCCGGY 1 cut(s) 816
Cfr13I GGNCC 2 cut(s) 828, 928
CseI GACGC 1 cut(s) 853
Csp6I GTAC 4 cut(s) 457, 496, 621, 646
CviJI RGCY 7 cut(s) 107, 535, 745, 792, 830, 876, 906
CviKI_1 RGCY 7 cut(s) 107, 535, 745, 792, 830, 876, 906
CviQI GTAC 4 cut(s) 457, 496, 621, 646
DdeI CTNAG 1 cut(s) 666
DinI GGCGCC 1 cut(s) 913
DpnI GATC 4 cut(s) 172, 291, 339, 921
DpnII GATC 4 cut(s) 170, 289, 337, 919
EaeI YGGCCR 2 cut(s) 874, 904
Eco130I CCWWGG 6 cut(s) 278, 824, 871, 901, 907, 915
Eco47I GGWCC 1 cut(s) 928
Eco91I GGTNACC 1 cut(s) 255
EcoO65I GGTNACC 1 cut(s) 255
EcoRI GAATTC 1 cut(s) 714
EcoRII CCWGG 1 cut(s) 436
EcoT14I CCWWGG 6 cut(s) 278, 824, 871, 901, 907, 915
EcoT22I ATGCAT 1 cut(s) 269
EgeI GGCGCC 1 cut(s) 913
EheI GGCGCC 1 cut(s) 913
ErhI CCWWGG 6 cut(s) 278, 824, 871, 901, 907, 915
FaqI GGGAC 2 cut(s) 706, 824
FbaI TGATCA 2 cut(s) 289, 337
Fnu4HI GCNGC 5 cut(s) 536, 793, 802, 814, 831
FokI GGATG 1 cut(s) 17
Fsp4HI GCNGC 5 cut(s) 536, 793, 802, 814, 831
FspBI CTAG 4 cut(s) 624, 696, 711, 825
GlaI GCGC 1 cut(s) 913
GluI GCNGC 5 cut(s) 536, 793, 802, 814, 831
GsaI CCCAGC 2 cut(s) 693, 744
HaeII RGCGCY 1 cut(s) 915
HaeIII GGCC 3 cut(s) 830, 876, 906
HapII CCGG 1 cut(s) 817
HgaI GACGC 1 cut(s) 853
HhaI GCGC 1 cut(s) 914
Hin1I GRCGYC 2 cut(s) 864, 912
Hin6I GCGC 1 cut(s) 912
HinP1I GCGC 1 cut(s) 912
HincII GTYRAC 1 cut(s) 552
HindII GTYRAC 1 cut(s) 552
HinfI GANTC 1 cut(s) 467
HpaI GTTAAC 1 cut(s) 552
HpaII CCGG 1 cut(s) 817
HphI GGTGA 3 cut(s) 347, 452, 859
Hpy166II GTNNAC 4 cut(s) 227, 367, 403, 552
Hpy188I TCNGA 3 cut(s) 94, 513, 657
Hpy8I GTNNAC 4 cut(s) 227, 367, 403, 552
HpyAV CCTTC 2 cut(s) 521, 854
HpyCH4III ACNGT 3 cut(s) 18, 620, 684
HpyCH4IV ACGT 1 cut(s) 405
HpyCH4V TGCA 4 cut(s) 26, 194, 267, 731
HpyF10VI GCNNNNNNNGC 4 cut(s) 737, 798, 801, 810
HpyF3I CTNAG 1 cut(s) 666
HpySE526I ACGT 1 cut(s) 405
Hsp92I GRCGYC 2 cut(s) 864, 912
HspAI GCGC 1 cut(s) 912
KasI GGCGCC 1 cut(s) 911
KroI GCCGGC 1 cut(s) 816
KroNI GCCGGC 1 cut(s) 818
Ksp22I TGATCA 2 cut(s) 289, 337
KspAI GTTAAC 1 cut(s) 552
Kzo9I GATC 4 cut(s) 170, 289, 337, 919
LmnI GCTCC 1 cut(s) 574
Lsp1109I GCAGC 2 cut(s) 522, 788
LweI GCATC 1 cut(s) 871
MaeI CTAG 4 cut(s) 624, 696, 711, 825
MaeII ACGT 1 cut(s) 405
MaeIII GTNAC 4 cut(s) 121, 255, 614, 865
MalI GATC 4 cut(s) 172, 291, 339, 921
MboI GATC 4 cut(s) 170, 289, 337, 919
MboII GAAGA 2 cut(s) 455, 488
MflI RGATCY 2 cut(s) 170, 919
MhlI GDGCHC 2 cut(s) 136, 571
MlsI TGGCCA 2 cut(s) 876, 906
MluCI AATT 9 cut(s) 11, 188, 197, 306, 328, 447, 490, 602, 714
MluNI TGGCCA 2 cut(s) 876, 906
Mly113I GGCGCC 1 cut(s) 912
MlyI GAGTC 1 cut(s) 461
MnlI CCTC 3 cut(s) 118, 246, 815
Mox20I TGGCCA 2 cut(s) 876, 906
Mph1103I ATGCAT 1 cut(s) 269
MreI CGCCGGCG 1 cut(s) 816
MroNI GCCGGC 1 cut(s) 816
MroXI GAANNNNTTC 1 cut(s) 99
MscI TGGCCA 2 cut(s) 876, 906
MseI TTAA 3 cut(s) 237, 551, 584
MslI CAYNNNNRTG 3 cut(s) 783, 876, 906
Msp20I TGGCCA 2 cut(s) 876, 906
MspI CCGG 1 cut(s) 817
MspR9I CCNGG 1 cut(s) 438
Mva1269I GAATGC 1 cut(s) 269
MvaI CCWGG 1 cut(s) 438
MwoI GCNNNNNNNGC 4 cut(s) 737, 798, 801, 810
NaeI GCCGGC 1 cut(s) 818
NarI GGCGCC 1 cut(s) 912
NcoI CCATGG 5 cut(s) 278, 871, 901, 907, 915
NdeII GATC 4 cut(s) 170, 289, 337, 919
NgoMIV GCCGGC 1 cut(s) 816
NlaIV GGNNCC 4 cut(s) 276, 812, 913, 921
NmuCI GTSAC 1 cut(s) 865
NsiI ATGCAT 1 cut(s) 269
PctI GAATGC 1 cut(s) 269
PdiI GCCGGC 1 cut(s) 818
PdmI GAANNNNTTC 1 cut(s) 99
PkrI GCNGC 5 cut(s) 537, 794, 803, 815, 832
PleI GAGTC 1 cut(s) 461
PluTI GGCGCC 1 cut(s) 915
PpsI GAGTC 1 cut(s) 461
Psp6I CCWGG 1 cut(s) 436
PspEI GGTNACC 1 cut(s) 255
PspFI CCCAGC 2 cut(s) 689, 740
PspGI CCWGG 1 cut(s) 436
PspN4I GGNNCC 4 cut(s) 276, 812, 913, 921
PspPI GGNCC 2 cut(s) 828, 928
PsuI RGATCY 2 cut(s) 170, 919
RsaI GTAC 4 cut(s) 458, 497, 622, 647
RsaNI GTAC 4 cut(s) 457, 496, 621, 646
RseI CAYNNNNRTG 3 cut(s) 783, 876, 906
SaqAI TTAA 3 cut(s) 237, 551, 584
SatI GCNGC 5 cut(s) 536, 793, 802, 814, 831
Sau3AI GATC 4 cut(s) 170, 289, 337, 919
Sau96I GGNCC 2 cut(s) 828, 928
SchI GAGTC 1 cut(s) 461
ScrFI CCNGG 1 cut(s) 438
SduI GDGCHC 2 cut(s) 136, 571
SetI ASST 7 cut(s) 257, 408, 442, 532, 568, 712, 826
SfaNI GCATC 1 cut(s) 871
SfoI GGCGCC 1 cut(s) 913
SgrAI CRCCGGYG 1 cut(s) 816
SinI GGWCC 1 cut(s) 928
SmiMI CAYNNNNRTG 3 cut(s) 783, 876, 906
Sse9I AATT 9 cut(s) 11, 188, 197, 306, 328, 447, 490, 602, 714
SsiI CCGC 3 cut(s) 793, 814, 831
SspDI GGCGCC 1 cut(s) 911
SspI AATATT 1 cut(s) 592
SspMI CTAG 4 cut(s) 624, 696, 711, 825
StyD4I CCNGG 1 cut(s) 436
StyI CCWWGG 6 cut(s) 278, 824, 871, 901, 907, 915
TaaI ACNGT 3 cut(s) 18, 620, 684
TaiI ACGT 1 cut(s) 408
TaqI TCGA 1 cut(s) 9
TasI AATT 9 cut(s) 11, 188, 197, 306, 328, 447, 490, 602, 714
TatI WGTACW 1 cut(s) 456
TauI GCSGC 3 cut(s) 795, 816, 833
Tru1I TTAA 3 cut(s) 237, 551, 584
Tru9I TTAA 3 cut(s) 237, 551, 584
TseFI GTSAC 1 cut(s) 865
TseI GCWGC 2 cut(s) 535, 801
Tsp45I GTSAC 1 cut(s) 865
TspDTI ATGAA 2 cut(s) 330, 429
VpaK11BI GGWCC 1 cut(s) 928
XapI RAATTY 3 cut(s) 197, 490, 714
XcmI CCANNNNNNNNNTGG 1 cut(s) 922
XmaJI CCTAGG 1 cut(s) 824
XmnI GAANNNNTTC 1 cut(s) 99
XspI CTAG 4 cut(s) 624, 696, 711, 825
Zsp2I ATGCAT 1 cut(s) 269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.