FvH4_3g36632

Belongs to the helicase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000080
Physical Location & Seq
Forward (+)
31381055 .. 31382302
1248 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g36632.t1

Sequence Viewer

Length: 1248 bp
ATGAATCATATAGTCTTAGCAACAGCATCATCTGGAATAGCGGCAAACATATTGCCCGGCGGGAGGACAGCTCACTCCAGATTCAAGATTCCCCTGAAAGTACTACCTTCATCTATGTGTTCCATAGGTAAACAGTCTGCACTGGCACAATTGGTACGACAATCCACTGCAGTTATATGGGATGAGGCACCTATGACAAATCGAGATGTGTTTGAATTAGTTGATCGAACTTTTCAGGACATAATGGACGTGGAACTTCCTTTTGGTGGTAAAATAATGATTTTCGGGGGAGATTTTCGTCAAGTCATTCCTGTCATTCCTAAAGGAACAAGGTCTCAACTCATCGAAGCCTCGATTATGAGATCATCGTTTTGGCCAGCTACAAGGATATTGAGATTGAGGCAGAATATGAGATCCATAAATGACCACCGATTTGGGGAGTTTCTATTACGTGTTGGTGATGGTAGTGAACAAGTCATCCATGACGACATGATAAGGTTACCAAAAAGCATGGTGATTCCATGGCAAAGCGACCAATCTATCTTTCAAATTATTGATAGAGTTTTCCCTAATCTTGGTGATCACGCAGGCGATGCAAGATACATGGTGGATAGAGCATTGATTACTCCTTTGAACAACGATGCAGACATGTTGAATGAAAAGATCATCAGTATGTTTCCTGGGGAAGAAATTTCATTTTACTCATTTGACTCTGTTGAAGATGACATCCGAAATCTGTACCAGCCTAAGTTTTTAAATTCAATAACCGCAAGTGGTTTACCGCCGCACATGTTAACTCTAAAAACAGGTGCTCCAATCATGCTCTTGAGAAATATAGACCCAAAATTAGGGTTGTGTAATGATACTAGATTGTTATGTCGTGGTTCCTACCAAAATTTGATTGATGCAGAAATTATGACAGGCGAGTTTGTTGGGTCTAGAGTTTTTTTGCCAAGAATTCCTTTGCAAAGTGCAGAAAATGCGGGACTACTGTTTCAACTTACAAGAAAGCAATTTCCAGTCAAGTTGAGCTTTGCTTTGACCATAAATAAATCTCAAGGTCAAACCATCCCACATGTGGGAGTTTACCTCCCAGATCATGTTTTTAGTCATGGACAATTATATGTGGCATTGTCGAGAGGAATATCAGAGTCTACCACAAAGCTGTTGGTTAAAAAAGGGTCCATAGTTGGTGAAGATGGCATATTTACTAAGAACGTCGTGTTTAAAGAAGTTTTGTTTCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

416

Amino Acids

46.4

Weight (kDa)

8.67

Isoelectric Point (pI)

38.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PIF1 PF05970 2 - 158 4.2e-52 PIF1-like helicase
Pif1_2B_dom PF21530 250 - 292 8.4e-19 DNA helicase Pif1, 2B domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 187
AccI GTMKAC 1 cut(s) 1154
AciI CCGC 6 cut(s) 41, 60, 768, 782, 785, 983
AclWI GGATC 1 cut(s) 408
AcoI YGGCCR 1 cut(s) 374
AcsI RAATTY 4 cut(s) 690, 757, 895, 957
AfaI GTAC 3 cut(s) 102, 156, 740
AfiI CCNNNNNNNGG 7 cut(s) 63, 266, 436, 575, 848, 1078, 1079
AflIII ACRYGT 4 cut(s) 451, 648, 789, 1075
AgsI TTSAA 8 cut(s) 85, 215, 548, 634, 655, 719, 762, 998
AjiI CACGTC 1 cut(s) 250
AjnI CCWGG 1 cut(s) 679
AjuI GAANNNNNNNTTGG 4 cut(s) 246, 278, 528, 560
AloI GAACNNNNNNTCC 2 cut(s) 462, 494
AluBI AGCT 4 cut(s) 71, 380, 1032, 1165
AluI AGCT 4 cut(s) 71, 380, 1032, 1165
Alw21I GWGCWC 1 cut(s) 814
Alw26I GTCTC 1 cut(s) 339
AlwI GGATC 1 cut(s) 408
AoxI GGCC 1 cut(s) 374
ApoI RAATTY 4 cut(s) 690, 757, 895, 957
ArsI GACNNNNNNTTYG 2 cut(s) 416, 448
AspS9I GGNCC 1 cut(s) 1182
AsuC2I CCSGG 1 cut(s) 57
AsuHPI GGTGA 4 cut(s) 470, 526, 590, 1205
AvaII GGWCC 1 cut(s) 1182
BalI TGGCCA 1 cut(s) 376
BanI GGYRCC 1 cut(s) 187
Bbv12I GWGCWC 1 cut(s) 814
BccI CCATC 3 cut(s) 455, 1076, 1193
BciT130I CCWGG 1 cut(s) 681
BclI TGATCA 1 cut(s) 580
BcnI CCSGG 1 cut(s) 57
BcoDI GTCTC 1 cut(s) 339
BfaI CTAG 2 cut(s) 867, 939
BfmI CTRYAG 1 cut(s) 168
BisI GCNGC 2 cut(s) 42, 785
BlsI GCNGC 2 cut(s) 43, 786
BmcAI AGTACT 1 cut(s) 102
Bme1390I CCNGG 2 cut(s) 57, 681
Bme18I GGWCC 1 cut(s) 1182
BmgBI CACGTC 1 cut(s) 250
BmgT120I GGNCC 1 cut(s) 1182
BmiI GGNNCC 3 cut(s) 189, 886, 1183
BmrFI CCNGG 2 cut(s) 57, 681
BmsI GCATC 4 cut(s) 35, 583, 631, 895
BplI GAGNNNNNCTC 4 cut(s) 55, 87, 1074, 1106
BpmI CTGGAG 1 cut(s) 61
BpuEI CTTGAG 2 cut(s) 847, 1041
BpuMI CCSGG 1 cut(s) 57
BsaAI YACGTR 1 cut(s) 452
BsaI GGTCTC 1 cut(s) 339
BsaJI CCNNGG 2 cut(s) 521, 680
BsaXI ACNNNNNCTCC 2 cut(s) 796, 826
Bsc4I CCNNNNNNNGG 7 cut(s) 63, 266, 436, 575, 848, 1078, 1079
Bse1I ACTGG 2 cut(s) 147, 1019
BseBI CCWGG 1 cut(s) 681
BseDI CCNNGG 2 cut(s) 521, 680
BseGI GGATG 4 cut(s) 187, 477, 726, 1068
BseLI CCNNNNNNNGG 7 cut(s) 63, 266, 436, 575, 848, 1078, 1079
BseNI ACTGG 2 cut(s) 147, 1019
BsgI GTGCAG 2 cut(s) 123, 993
BshFI GGCC 1 cut(s) 376
BshNI GGYRCC 1 cut(s) 187
BsiHKAI GWGCWC 1 cut(s) 814
BsiSI CCGG 1 cut(s) 57
BslFI GGGAC 1 cut(s) 999
BslI CCNNNNNNNGG 7 cut(s) 63, 266, 436, 575, 848, 1078, 1079
BsmAI GTCTC 1 cut(s) 339
BsmFI GGGAC 1 cut(s) 999
BsnI GGCC 1 cut(s) 376
Bso31I GGTCTC 1 cut(s) 339
Bsp1286I GDGCHC 1 cut(s) 814
Bsp143I GATC 6 cut(s) 223, 362, 413, 580, 663, 1096
Bsp19I CCATGG 1 cut(s) 521
BspACI CCGC 6 cut(s) 41, 60, 768, 782, 785, 983
BspANI GGCC 1 cut(s) 376
BspLI GGNNCC 3 cut(s) 189, 886, 1183
BspMAI CTGCAG 1 cut(s) 172
BspPI GGATC 1 cut(s) 408
BspT107I GGYRCC 1 cut(s) 187
BspTNI GGTCTC 1 cut(s) 339
BsrI ACTGG 2 cut(s) 147, 1019
BssECI CCNNGG 2 cut(s) 521, 680
BssMI GATC 6 cut(s) 223, 362, 413, 580, 663, 1096
BssT1I CCWWGG 1 cut(s) 521
Bst2UI CCWGG 1 cut(s) 681
Bst4CI ACNGT 2 cut(s) 135, 993
BstAPI GCANNNNNTGC 2 cut(s) 593, 980
BstBAI YACGTR 1 cut(s) 452
BstC8I GCNNGC 2 cut(s) 378, 589
BstDEI CTNAG 3 cut(s) 16, 747, 1212
BstDSI CCRYGG 1 cut(s) 521
BstEII GGTNACC 1 cut(s) 498
BstF5I GGATG 4 cut(s) 187, 477, 726, 1068
BstKTI GATC 6 cut(s) 226, 365, 416, 583, 666, 1099
BstMAI GTCTC 1 cut(s) 339
BstMBI GATC 6 cut(s) 223, 362, 413, 580, 663, 1096
BstMWI GCNNNNNNNGC 2 cut(s) 593, 980
BstNI CCWGG 1 cut(s) 681
BstNSI RCATGY 3 cut(s) 652, 793, 1079
BstPI GGTNACC 1 cut(s) 498
BstSCI CCNGG 2 cut(s) 55, 679
BstSFI CTRYAG 1 cut(s) 168
BstX2I RGATCY 1 cut(s) 413
BstXI CCANNNNNNTGG 1 cut(s) 434
BstYI RGATCY 1 cut(s) 413
BsuRI GGCC 1 cut(s) 376
BtgI CCRYGG 1 cut(s) 521
BtgZI GCGATG 1 cut(s) 606
BtrI CACGTC 1 cut(s) 250
BtsCI GGATG 4 cut(s) 187, 477, 726, 1068
BtsI GCAGTG 1 cut(s) 165
BtsIMutI CAGTG 2 cut(s) 140, 165
Cac8I GCNNGC 2 cut(s) 378, 589
Cfr13I GGNCC 1 cut(s) 1182
Csp6I GTAC 3 cut(s) 101, 155, 739
CviJI RGCY 7 cut(s) 71, 350, 376, 380, 745, 1032, 1165
CviKI_1 RGCY 7 cut(s) 71, 350, 376, 380, 745, 1032, 1165
CviQI GTAC 3 cut(s) 101, 155, 739
DdeI CTNAG 3 cut(s) 16, 747, 1212
DpnI GATC 6 cut(s) 225, 364, 415, 582, 665, 1098
DpnII GATC 6 cut(s) 223, 362, 413, 580, 663, 1096
DraI TTTAAA 2 cut(s) 756, 1228
EaeI YGGCCR 1 cut(s) 374
Eco130I CCWWGG 1 cut(s) 521
Eco31I GGTCTC 1 cut(s) 339
Eco47I GGWCC 1 cut(s) 1182
Eco91I GGTNACC 1 cut(s) 498
EcoO65I GGTNACC 1 cut(s) 498
EcoRI GAATTC 1 cut(s) 957
EcoRII CCWGG 1 cut(s) 679
EcoT14I CCWWGG 1 cut(s) 521
ErhI CCWWGG 1 cut(s) 521
FalI AAGNNNNNCTT 4 cut(s) 946, 978, 1016, 1048
FaqI GGGAC 1 cut(s) 999
FauI CCCGC 2 cut(s) 53, 976
FbaI TGATCA 1 cut(s) 580
FblI GTMKAC 1 cut(s) 1154
Fnu4HI GCNGC 2 cut(s) 42, 785
FokI GGATG 4 cut(s) 194, 464, 713, 1055
Fsp4HI GCNGC 2 cut(s) 42, 785
FspBI CTAG 2 cut(s) 867, 939
GluI GCNGC 2 cut(s) 42, 785
GsuI CTGGAG 1 cut(s) 61
HaeIII GGCC 1 cut(s) 376
HapII CCGG 1 cut(s) 57
HincII GTYRAC 1 cut(s) 795
HindII GTYRAC 1 cut(s) 795
HinfI GANTC 6 cut(s) 4, 81, 88, 517, 710, 1151
HpaI GTTAAC 1 cut(s) 795
HpaII CCGG 1 cut(s) 57
HphI GGTGA 4 cut(s) 470, 526, 590, 1205
Hpy166II GTNNAC 6 cut(s) 131, 470, 779, 795, 1087, 1155
Hpy188I TCNGA 2 cut(s) 731, 1150
Hpy188III TCNNGA 8 cut(s) 33, 78, 85, 203, 236, 826, 939, 1137
Hpy8I GTNNAC 6 cut(s) 131, 470, 779, 795, 1087, 1155
Hpy99I CGWCG 1 cut(s) 1223
HpyAV CCTTC 1 cut(s) 117
HpyCH4III ACNGT 2 cut(s) 135, 993
HpyCH4IV ACGT 3 cut(s) 249, 451, 1218
HpyCH4V TGCA 7 cut(s) 140, 170, 596, 644, 908, 967, 974
HpyF10VI GCNNNNNNNGC 2 cut(s) 593, 980
HpyF3I CTNAG 3 cut(s) 16, 747, 1212
HpySE526I ACGT 3 cut(s) 249, 451, 1218
Ksp22I TGATCA 1 cut(s) 580
KspAI GTTAAC 1 cut(s) 795
Kzo9I GATC 6 cut(s) 223, 362, 413, 580, 663, 1096
LmnI GCTCC 1 cut(s) 817
LweI GCATC 4 cut(s) 35, 583, 631, 895
MaeI CTAG 2 cut(s) 867, 939
MaeII ACGT 3 cut(s) 249, 451, 1218
MaeIII GTNAC 1 cut(s) 498
MalI GATC 6 cut(s) 225, 364, 415, 582, 665, 1098
MboI GATC 6 cut(s) 223, 362, 413, 580, 663, 1096
MboII GAAGA 3 cut(s) 698, 731, 1208
MfeI CAATTG 1 cut(s) 149
MflI RGATCY 1 cut(s) 413
MhlI GDGCHC 1 cut(s) 814
MlsI TGGCCA 1 cut(s) 376
MluNI TGGCCA 1 cut(s) 376
MlyI GAGTC 2 cut(s) 704, 1160
MnlI CCTC 6 cut(s) 57, 178, 361, 393, 1100, 1133
Mox20I TGGCCA 1 cut(s) 376
MscI TGGCCA 1 cut(s) 376
MseI TTAA 4 cut(s) 755, 794, 1173, 1227
MslI CAYNNNNRTG 2 cut(s) 115, 671
Msp20I TGGCCA 1 cut(s) 376
MspI CCGG 1 cut(s) 57
MspR9I CCNGG 2 cut(s) 57, 681
MunI CAATTG 1 cut(s) 149
MvaI CCWGG 1 cut(s) 681
MwoI GCNNNNNNNGC 2 cut(s) 593, 980
NciI CCSGG 1 cut(s) 57
NcoI CCATGG 1 cut(s) 521
NdeII GATC 6 cut(s) 223, 362, 413, 580, 663, 1096
NlaIV GGNNCC 3 cut(s) 189, 886, 1183
NspI RCATGY 3 cut(s) 652, 793, 1079
PciI ACATGT 3 cut(s) 648, 789, 1075
PfeI GAWTC 4 cut(s) 4, 81, 88, 517
PkrI GCNGC 2 cut(s) 43, 786
PleI GAGTC 2 cut(s) 704, 1159
PpsI GAGTC 2 cut(s) 704, 1159
Ppu21I YACGTR 1 cut(s) 452
PscI ACATGT 3 cut(s) 648, 789, 1075
Psp6I CCWGG 1 cut(s) 679
PspEI GGTNACC 1 cut(s) 498
PspGI CCWGG 1 cut(s) 679
PspN4I GGNNCC 3 cut(s) 189, 886, 1183
PspPI GGNCC 1 cut(s) 1182
PstI CTGCAG 1 cut(s) 172
PsuI RGATCY 1 cut(s) 413
RsaI GTAC 3 cut(s) 102, 156, 740
RsaNI GTAC 3 cut(s) 101, 155, 739
RseI CAYNNNNRTG 2 cut(s) 115, 671
SaqAI TTAA 4 cut(s) 755, 794, 1173, 1227
SatI GCNGC 2 cut(s) 42, 785
Sau3AI GATC 6 cut(s) 223, 362, 413, 580, 663, 1096
Sau96I GGNCC 1 cut(s) 1182
ScaI AGTACT 1 cut(s) 102
SchI GAGTC 2 cut(s) 704, 1160
ScrFI CCNGG 2 cut(s) 57, 681
SduI GDGCHC 1 cut(s) 814
SfaNI GCATC 4 cut(s) 35, 583, 631, 895
SfcI CTRYAG 1 cut(s) 168
SinI GGWCC 1 cut(s) 1182
SmiMI CAYNNNNRTG 2 cut(s) 115, 671
SmlI CTYRAG 2 cut(s) 826, 1056
SmoI CTYRAG 2 cut(s) 826, 1056
SsiI CCGC 6 cut(s) 41, 60, 768, 782, 785, 983
SspMI CTAG 2 cut(s) 867, 939
StyD4I CCNGG 2 cut(s) 55, 679
StyI CCWWGG 1 cut(s) 521
TaaI ACNGT 2 cut(s) 135, 993
TaiI ACGT 3 cut(s) 252, 454, 1221
TaqI TCGA 5 cut(s) 202, 226, 345, 353, 1136
TatI WGTACW 1 cut(s) 100
TauI GCSGC 2 cut(s) 44, 787
TfiI GAWTC 4 cut(s) 4, 81, 88, 517
Tru1I TTAA 4 cut(s) 755, 794, 1173, 1227
Tru9I TTAA 4 cut(s) 755, 794, 1173, 1227
TscAI CASTG 2 cut(s) 147, 172
TspDTI ATGAA 5 cut(s) 17, 99, 672, 684, 1232
TspRI CASTG 2 cut(s) 147, 172
VpaK11BI GGWCC 1 cut(s) 1182
XapI RAATTY 4 cut(s) 690, 757, 895, 957
XbaI TCTAGA 1 cut(s) 938
XceI RCATGY 3 cut(s) 652, 793, 1079
XcmI CCANNNNNNNNNTGG 2 cut(s) 1075, 1165
XmiI GTMKAC 1 cut(s) 1154
XspI CTAG 2 cut(s) 867, 939
ZrmI AGTACT 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.