Rw5G019260

Helicase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000080
Physical Location & Seq
Forward (+)
25084918 .. 25087158
2241 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G019260.1

Sequence Viewer

Length: 1341 bp
ATGAAGGTAAGAAATGACAAACATCAATGTATTTTCAGTATTGTTTCAGTAATGAAACTGCAATTATTGATGTTTTTTTTTTCCATAATAGGAACCTCTGAAAATTTAAGAATGCGCTTGAGTCATATAAGGCAACTAGCACGGTCAAATAGGTCGCAAATGCCTAATAGTGGAGTTAACCAAAATGCTGGGAATAATGAAGATCACATAGTACTCAATGAAGGAACCTCTGAAAATGTCATTCCTCAAAATAGCATGACCTATAATAACAGTGTTGTCCAAGTACGTCTTAGAGCTAGAGTGGGTGCAGATGATGCAGAAAATCTGAGAGGTCGTGATATTGTAGTACAGACAAGAGAGGGTCAACTTTTAAATGTCCAAGACTGTGCGGGTTACTATGATCCTTTACAATATCCATTGCTTTTACCTTATGGCACATATGGATGGGATGTGAATAGTCGGAATAATAATGGTACAAAATTGACGTGTCGTGACTATTACGCATATATTTTGCAGATTCGTCCACATAATGAATCAATTTTACTTCGAGGAGGCCGCCTGTTACAACAATATGTTGTCGATAATTATGTGAAAATTGAGACACAAAAGCTTAGATGGATTCGCAGTAATCAAGATACCCTGCCACGTGAACTTTATAATGGACTCCAAGACTCGCTAAATGCCGGTGAAAACAATGCAGGTAACATTGGTCGCAGAACTATTTTACCTTCCTCATTTATCGGTAGTCCACGTGATATGCACCAGAGATACCAAGATGCAATGGCTTTGGTCCAAAAATACGGGAAGCCAGATATTTTTCTCACAATGACATGCAACCCGAATTGGGAAGAAATAAAGGCAGAGTTATTACCGGGTCAAGTGGCACAAGATCGCCCAGATTTATGTACCCGGATTTTTCGTGCCAAATTTGAAGAGCTGAAGGAAGACGTTATCAAAAAAGGGGTCTTAGGTACTGTTGTTGCACATGTTTATGTCATCGAATTTCAAAAACGTGGTCTCCCATATGTTCATATGCTTCTGATGTTAAGTGATGATGATAAGTTGAATAACTCGGATGATTATGACAAAATTGTTCGAGCTGAAATACCAAGTCAAGATGAAGAACCGGAGTTGTACAATGCCGTATTGAGGCACATGATACATGGTCCATGTGGAGTACATAAGCGTAATGCCCCATGTATGAAGCGTGGGAGTTGTAAACGAGGTTATCCTAAGCCCTTTTCAGCCAACACATTTCAAGGGAATGACTCTTATCCCATTTACCGTAGGCGAGATGTTCACCCAATGCGGAATCTGATTTCAATCAAAGCAGACAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

446

Amino Acids

51.27

Weight (kDa)

9.08

Isoelectric Point (pI)

48.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Helitron_like_N PF14214 166 - 347 9.3e-63 Helitron helicase-like domain at N-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 657
Acc36I ACCTGC 1 cut(s) 689
AciI CCGC 3 cut(s) 389, 556, 1309
AclWI GGATC 1 cut(s) 395
AcsI RAATTY 3 cut(s) 103, 926, 1001
AcuI CTGAAG 1 cut(s) 959
AcvI CACGTG 2 cut(s) 647, 752
AfaI GTAC 8 cut(s) 213, 285, 348, 475, 907, 973, 1136, 1179
AfiI CCNNNNNNNGG 3 cut(s) 170, 844, 1149
AflIII ACRYGT 2 cut(s) 485, 985
AgsI TTSAA 5 cut(s) 932, 1007, 1066, 1259, 1323
AjiI CACGTC 1 cut(s) 486
AluBI AGCT 4 cut(s) 296, 610, 937, 1100
AluI AGCT 4 cut(s) 296, 610, 937, 1100
Alw26I GTCTC 2 cut(s) 593, 1022
AlwI GGATC 1 cut(s) 395
AoxI GGCC 1 cut(s) 553
ApoI RAATTY 3 cut(s) 103, 926, 1001
ArsI GACNNNNNNTTYG 4 cut(s) 948, 980, 1000, 1032
AspLEI GCGC 1 cut(s) 117
AspS9I GGNCC 2 cut(s) 790, 1166
AsuC2I CCSGG 2 cut(s) 873, 910
AsuHPI GGTGA 2 cut(s) 698, 1292
AvaII GGWCC 2 cut(s) 790, 1166
BaeI ACNNNNGTAYC 2 cut(s) 963, 996
BbrPI CACGTG 2 cut(s) 647, 752
BbsI GAAGAC 1 cut(s) 951
BccI CCATC 2 cut(s) 438, 609
BceAI ACGGC 1 cut(s) 1127
BcnI CCSGG 2 cut(s) 873, 910
BcoDI GTCTC 2 cut(s) 593, 1022
BfaI CTAG 2 cut(s) 137, 297
BfuAI ACCTGC 1 cut(s) 689
BisI GCNGC 1 cut(s) 556
BlsI GCNGC 1 cut(s) 557
BmcAI AGTACT 1 cut(s) 213
Bme1390I CCNGG 2 cut(s) 873, 910
Bme18I GGWCC 2 cut(s) 790, 1166
BmgBI CACGTC 1 cut(s) 486
BmgT120I GGNCC 2 cut(s) 790, 1166
BmiI GGNNCC 2 cut(s) 94, 226
BmrFI CCNGG 2 cut(s) 873, 910
BmsI GCATC 2 cut(s) 304, 766
BpiI GAAGAC 1 cut(s) 951
Bpu10I CCTNAGC 1 cut(s) 1233
BpuEI CTTGAG 1 cut(s) 139
BpuMI CCSGG 2 cut(s) 873, 910
BsaAI YACGTR 2 cut(s) 647, 752
BsaBI GATNNNNATC 1 cut(s) 1322
BsaI GGTCTC 1 cut(s) 1022
BsaWI WCCGGW 1 cut(s) 1126
BsaXI ACNNNNNCTCC 2 cut(s) 1002, 1032
Bsc4I CCNNNNNNNGG 3 cut(s) 170, 844, 1149
Bse118I RCCGGY 1 cut(s) 683
Bse3DI GCAATG 2 cut(s) 416, 786
Bse8I GATNNNNATC 1 cut(s) 1322
BseGI GGATG 3 cut(s) 449, 454, 1081
BseJI GATNNNNATC 1 cut(s) 1322
BseLI CCNNNNNNNGG 3 cut(s) 170, 844, 1149
BseMI GCAATG 2 cut(s) 416, 786
BseMII CTCAG 1 cut(s) 317
BseRI GAGGAG 1 cut(s) 564
BseYI CCCAGC 1 cut(s) 188
BsgI GTGCAG 1 cut(s) 327
BshFI GGCC 1 cut(s) 555
BsiSI CCGG 4 cut(s) 684, 872, 910, 1127
BslI CCNNNNNNNGG 3 cut(s) 170, 844, 1149
BsmAI GTCTC 2 cut(s) 593, 1022
BsmI GAATGC 1 cut(s) 117
BsnI GGCC 1 cut(s) 555
Bso31I GGTCTC 1 cut(s) 1022
Bsp1407I TGTACA 1 cut(s) 1134
Bsp143I GATC 3 cut(s) 202, 400, 889
BspACI CCGC 3 cut(s) 389, 556, 1309
BspANI GGCC 1 cut(s) 555
BspCNI CTCAG 1 cut(s) 318
BspLI GGNNCC 2 cut(s) 94, 226
BspMI ACCTGC 1 cut(s) 689
BspPI GGATC 1 cut(s) 395
BspQI GCTCTTC 1 cut(s) 927
BspTNI GGTCTC 1 cut(s) 1022
BsrDI GCAATG 2 cut(s) 416, 786
BsrFI RCCGGY 1 cut(s) 683
BsrGI TGTACA 1 cut(s) 1134
BssAI RCCGGY 1 cut(s) 683
BssMI GATC 3 cut(s) 202, 400, 889
Bst4CI ACNGT 5 cut(s) 144, 272, 386, 976, 1286
Bst6I CTCTTC 1 cut(s) 927
BstAPI GCANNNNNTGC 1 cut(s) 314
BstAUI TGTACA 1 cut(s) 1134
BstBAI YACGTR 2 cut(s) 647, 752
BstDEI CTNAG 5 cut(s) 290, 326, 611, 967, 1233
BstF5I GGATG 3 cut(s) 449, 454, 1081
BstHHI GCGC 1 cut(s) 117
BstKTI GATC 3 cut(s) 205, 403, 892
BstMAI GTCTC 2 cut(s) 593, 1022
BstMBI GATC 3 cut(s) 202, 400, 889
BstMWI GCNNNNNNNGC 1 cut(s) 314
BstNSI RCATGY 2 cut(s) 834, 989
BstSCI CCNGG 2 cut(s) 871, 908
BstV2I GAAGAC 1 cut(s) 951
BstXI CCANNNNNNTGG 1 cut(s) 188
BsuRI GGCC 1 cut(s) 555
BtrI CACGTC 1 cut(s) 486
BtsCI GGATG 3 cut(s) 449, 454, 1081
BtsIMutI CAGTG 1 cut(s) 277
BveI ACCTGC 1 cut(s) 689
CfoI GCGC 1 cut(s) 117
Cfr10I RCCGGY 1 cut(s) 683
Cfr13I GGNCC 2 cut(s) 790, 1166
Csp6I GTAC 8 cut(s) 212, 284, 347, 474, 906, 972, 1135, 1178
CviAII CATG 7 cut(s) 256, 831, 986, 1156, 1163, 1170, 1197
CviJI RGCY 9 cut(s) 296, 555, 610, 785, 808, 937, 1100, 1237, 1247
CviKI_1 RGCY 9 cut(s) 296, 555, 610, 785, 808, 937, 1100, 1237, 1247
CviQI GTAC 8 cut(s) 212, 284, 347, 474, 906, 972, 1135, 1178
DdeI CTNAG 5 cut(s) 290, 326, 611, 967, 1233
DpnI GATC 3 cut(s) 204, 402, 891
DpnII GATC 3 cut(s) 202, 400, 889
DraI TTTAAA 1 cut(s) 372
Eam1104I CTCTTC 1 cut(s) 927
EarI CTCTTC 1 cut(s) 927
Eco31I GGTCTC 1 cut(s) 1022
Eco47I GGWCC 2 cut(s) 790, 1166
Eco57I CTGAAG 1 cut(s) 959
Eco72I CACGTG 2 cut(s) 647, 752
FaeI CATG 7 cut(s) 259, 834, 989, 1159, 1166, 1173, 1200
FalI AAGNNNNNCTT 2 cut(s) 273, 305
FatI CATG 7 cut(s) 255, 830, 985, 1155, 1162, 1169, 1196
FauI CCCGC 1 cut(s) 382
FauNDI CATATG 3 cut(s) 439, 1024, 1032
Fnu4HI GCNGC 1 cut(s) 556
FokI GGATG 3 cut(s) 456, 461, 1088
Fsp4HI GCNGC 1 cut(s) 556
FspBI CTAG 2 cut(s) 137, 297
GlaI GCGC 1 cut(s) 116
GluI GCNGC 1 cut(s) 556
GsaI CCCAGC 1 cut(s) 192
HaeIII GGCC 1 cut(s) 555
HapII CCGG 4 cut(s) 684, 872, 910, 1127
HhaI GCGC 1 cut(s) 117
Hin1II CATG 7 cut(s) 259, 834, 989, 1159, 1166, 1173, 1200
Hin6I GCGC 1 cut(s) 115
HinP1I GCGC 1 cut(s) 115
HincII GTYRAC 2 cut(s) 178, 365
HindII GTYRAC 2 cut(s) 178, 365
HindIII AAGCTT 1 cut(s) 608
HinfI GANTC 8 cut(s) 121, 517, 533, 619, 663, 671, 1268, 1312
HpaI GTTAAC 1 cut(s) 178
HpaII CCGG 4 cut(s) 684, 872, 910, 1127
HphI GGTGA 2 cut(s) 698, 1292
Hpy166II GTNNAC 7 cut(s) 178, 365, 524, 650, 749, 1220, 1300
Hpy188I TCNGA 7 cut(s) 100, 232, 327, 462, 1041, 1075, 1317
Hpy188III TCNNGA 4 cut(s) 335, 491, 632, 1115
Hpy8I GTNNAC 7 cut(s) 178, 365, 524, 650, 749, 1220, 1300
HpyAV CCTTC 3 cut(s) 215, 738, 934
HpyCH4III ACNGT 5 cut(s) 144, 272, 386, 976, 1286
HpyCH4IV ACGT 6 cut(s) 286, 485, 646, 751, 948, 1012
HpyCH4V TGCA 9 cut(s) 61, 308, 317, 514, 698, 760, 779, 834, 983
HpyF10VI GCNNNNNNNGC 1 cut(s) 314
HpyF3I CTNAG 5 cut(s) 290, 326, 611, 967, 1233
HpySE526I ACGT 6 cut(s) 286, 485, 646, 751, 948, 1012
Hsp92II CATG 7 cut(s) 259, 834, 989, 1159, 1166, 1173, 1200
HspAI GCGC 1 cut(s) 115
KspAI GTTAAC 1 cut(s) 178
Kzo9I GATC 3 cut(s) 202, 400, 889
LguI GCTCTTC 1 cut(s) 927
LweI GCATC 2 cut(s) 304, 766
MaeI CTAG 2 cut(s) 137, 297
MaeII ACGT 6 cut(s) 286, 485, 646, 751, 948, 1012
MaeIII GTNAC 4 cut(s) 392, 491, 561, 701
MalI GATC 3 cut(s) 204, 402, 891
MboI GATC 3 cut(s) 202, 400, 889
MboII GAAGA 5 cut(s) 212, 860, 944, 956, 1133
MlyI GAGTC 4 cut(s) 130, 657, 665, 1262
MmeI TCCRAC 1 cut(s) 440
MseI TTAA 4 cut(s) 107, 177, 371, 1046
MslI CAYNNNNRTG 2 cut(s) 442, 990
MspI CCGG 4 cut(s) 684, 872, 910, 1127
MspR9I CCNGG 2 cut(s) 873, 910
Mva1269I GAATGC 1 cut(s) 117
MwoI GCNNNNNNNGC 1 cut(s) 314
NciI CCSGG 2 cut(s) 873, 910
NdeI CATATG 3 cut(s) 439, 1024, 1032
NdeII GATC 3 cut(s) 202, 400, 889
NlaIII CATG 7 cut(s) 259, 834, 989, 1159, 1166, 1173, 1200
NlaIV GGNNCC 2 cut(s) 94, 226
NmuCI GTSAC 1 cut(s) 491
NspI RCATGY 2 cut(s) 834, 989
PciI ACATGT 1 cut(s) 985
PciSI GCTCTTC 1 cut(s) 927
PctI GAATGC 1 cut(s) 117
PfeI GAWTC 4 cut(s) 517, 533, 619, 1312
PkrI GCNGC 1 cut(s) 557
PleI GAGTC 4 cut(s) 129, 657, 665, 1262
PmaCI CACGTG 2 cut(s) 647, 752
PmlI CACGTG 2 cut(s) 647, 752
PpsI GAGTC 4 cut(s) 129, 657, 665, 1262
Ppu21I YACGTR 2 cut(s) 647, 752
PscI ACATGT 1 cut(s) 985
PsiI TTATAA 1 cut(s) 657
PspCI CACGTG 2 cut(s) 647, 752
PspFI CCCAGC 1 cut(s) 188
PspN4I GGNNCC 2 cut(s) 94, 226
PspPI GGNCC 2 cut(s) 790, 1166
RsaI GTAC 8 cut(s) 213, 285, 348, 475, 907, 973, 1136, 1179
RsaNI GTAC 8 cut(s) 212, 284, 347, 474, 906, 972, 1135, 1178
RseI CAYNNNNRTG 2 cut(s) 442, 990
SapI GCTCTTC 1 cut(s) 927
SaqAI TTAA 4 cut(s) 107, 177, 371, 1046
SatI GCNGC 1 cut(s) 556
Sau3AI GATC 3 cut(s) 202, 400, 889
Sau96I GGNCC 2 cut(s) 790, 1166
ScaI AGTACT 1 cut(s) 213
SchI GAGTC 4 cut(s) 130, 657, 665, 1262
ScrFI CCNGG 2 cut(s) 873, 910
SfaNI GCATC 2 cut(s) 304, 766
SinI GGWCC 2 cut(s) 790, 1166
SmiMI CAYNNNNRTG 2 cut(s) 442, 990
SmlI CTYRAG 1 cut(s) 118
SmoI CTYRAG 1 cut(s) 118
SsiI CCGC 3 cut(s) 389, 556, 1309
SspMI CTAG 2 cut(s) 137, 297
StyD4I CCNGG 2 cut(s) 871, 908
TaaI ACNGT 5 cut(s) 144, 272, 386, 976, 1286
TaiI ACGT 6 cut(s) 289, 488, 649, 754, 951, 1015
TaqI TCGA 4 cut(s) 547, 579, 999, 1096
TatI WGTACW 4 cut(s) 211, 346, 1134, 1177
TauI GCSGC 1 cut(s) 558
TfiI GAWTC 4 cut(s) 517, 533, 619, 1312
Tru1I TTAA 4 cut(s) 107, 177, 371, 1046
Tru9I TTAA 4 cut(s) 107, 177, 371, 1046
TscAI CASTG 1 cut(s) 277
TseFI GTSAC 1 cut(s) 491
Tsp45I GTSAC 1 cut(s) 491
TspDTI ATGAA 8 cut(s) 17, 68, 213, 234, 546, 1019, 1134, 1217
TspRI CASTG 1 cut(s) 277
VpaK11BI GGWCC 2 cut(s) 790, 1166
XapI RAATTY 3 cut(s) 103, 926, 1001
XceI RCATGY 2 cut(s) 834, 989
XspI CTAG 2 cut(s) 137, 297
ZrmI AGTACT 1 cut(s) 213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.