Rmu_sc0001074.1_g000030

Belongs to the helicase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001074.1
OG0000080
Physical Location & Seq
Reverse (-)
141885 .. 144216
2332 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001074.1_g000030.1.cds

Sequence Viewer

Length: 1611 bp
atgttagaagaaaatgacaagcttaataactctgatgaatatgatcgcattgttagagctgaaataccatatgaggatgaggagcctcaactttatgatattttcgttgttgaatttcaaaaacgggagctgaaataccatgaggatgaggagcctcaactttatgatgcagtgtgtacacatatgattcatggtccatgtggaactcttaacccaaggcagtcatgtatgaaaaatgggagttgcaataaaggctacccaaaaccatttgcaaatttcactgtgcaagggaatgatgcatatcctgtatatcagagacgagcaagtcgtttactggtacatttgcgtagacgagaagatgtgatggtggatgacagttgggtggttccctacaacccatggttgctattacgtgtctcaccgtatgaaggtgagaaattttacctgcttgtccttcttaatcatgtcaaaggtccaagatcatttcgtgatttgcttactgttaatggtgttctacaaccaactttcaagcaagcagcagagaaacaaggtttgctagaaaatgacaatagtatccgacagtgtttgttggaggcctctgcaattaggatgccatcaactttgaggagattatttgtcacaattttggtgtacaatgagccaatcggtgtccgaacattgtgggatgaattttttccttttatggtggaagattatccttcatctggtgatattgcaaaccgaaacaggctcttacaagatttaaatggagtacttgaacaatttagcaggaacattagagattttgacctacctgaaatgacaacggagctagaagaaaattcaagaatgccaaggtgtattgaagacgaactttccgtacatatctctaaagaagacattgatgcaattgaccgccttaatgatgaccaaaggatcgcctttaacaggatcatggatgcagttcagagaaaaagaagtgtattaatattttttgttgatggtcctggtggaactgggaagacatatttataccgtgcattgctagcaaacatacgaagaacaaatcatatagtcttagccacaacatcatctggaatagctgcaaatatactgcccggcgggaggacagctcactctagatttaagattccactcaatgtagatgcgtcatctatgtgttccataagtaaattgtctgctctggcacaactgatacaagattcgactgcaattatttgggataaggcacctatgacacatcgacatgtctttgaagcacttgatcgaacttttagagacataatggatgtcgacttaccatttggtggaaagataatgatttttgggggagattttcgtcaagtcctccctgttattcctaaaggaacgaagtctgaactcattcaagcctccattgtgaaatcaacattttggacacagataaagatattgagactgagacagaatatgagatccataaatgaccaccaatttgcagagtttcttcttcgtgtaggctatgggagcgaacaagtcatcaatgacgaaatgataagattaccggaatgcatggtggttccatgggaaagcgaccaatcatttgggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

536

Amino Acids

61.72

Weight (kDa)

5.69

Isoelectric Point (pI)

53.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 324
Acc36I ACCTGC 1 cut(s) 453
AccB1I GGYRCC 1 cut(s) 1249
AccB7I CCANNNNNTGG 1 cut(s) 1328
AccI GTMKAC 2 cut(s) 349, 1314
AciI CCGC 2 cut(s) 916, 1122
AclWI GGATC 3 cut(s) 944, 959, 1470
AcsI RAATTY 5 cut(s) 113, 274, 437, 689, 841
AfaI GTAC 5 cut(s) 178, 339, 653, 774, 882
AfiI CCNNNNNNNGG 5 cut(s) 428, 725, 948, 1125, 1328
AflIII ACRYGT 2 cut(s) 412, 1267
AgsI TTSAA 8 cut(s) 113, 119, 529, 779, 846, 866, 1277, 1409
AjnI CCWGG 1 cut(s) 1006
AluBI AGCT 6 cut(s) 22, 59, 130, 832, 1103, 1133
AluI AGCT 6 cut(s) 22, 59, 130, 832, 1103, 1133
Alw26I GTCTC 5 cut(s) 310, 421, 1293, 1450, 1456
AlwI GGATC 3 cut(s) 944, 959, 1470
AoxI GGCC 1 cut(s) 594
ApeKI GCWGC 2 cut(s) 536, 1103
ApoI RAATTY 5 cut(s) 113, 274, 437, 689, 841
ArsI GACNNNNNNTTYG 5 cut(s) 1307, 1339, 1478, 1510, 1586
AseI ATTAAT 1 cut(s) 986
Asp700I GAANNNNTTC 2 cut(s) 693, 1404
AspS9I GGNCC 3 cut(s) 194, 473, 1004
AsuC2I CCSGG 1 cut(s) 1119
AsuHPI GGTGA 3 cut(s) 411, 443, 740
AsuNHI GCTAGC 1 cut(s) 1045
AvaII GGWCC 3 cut(s) 194, 473, 1004
BaeI ACNNNNGTAYC 2 cut(s) 556, 589
BanI GGYRCC 1 cut(s) 1249
BbsI GAAGAC 3 cut(s) 873, 903, 1028
BbvI GCAGC 2 cut(s) 548, 1090
BccI CCATC 3 cut(s) 358, 622, 995
BciT130I CCWGG 1 cut(s) 1008
BciVI GTATCC 1 cut(s) 584
BcnI CCSGG 1 cut(s) 1119
BcoDI GTCTC 5 cut(s) 310, 421, 1293, 1450, 1456
BfaI CTAG 4 cut(s) 557, 833, 1046, 1140
BfuAI ACCTGC 1 cut(s) 453
BfuI GTATCC 1 cut(s) 584
BisI GCNGC 2 cut(s) 537, 1104
BlsI GCNGC 2 cut(s) 538, 1105
BmcAI AGTACT 1 cut(s) 774
Bme1390I CCNGG 2 cut(s) 1008, 1119
Bme18I GGWCC 3 cut(s) 194, 473, 1004
BmgT120I GGNCC 3 cut(s) 194, 473, 1004
BmiI GGNNCC 5 cut(s) 84, 153, 387, 1251, 1581
BmrFI CCNGG 2 cut(s) 1008, 1119
BmrI ACTGGG 1 cut(s) 1026
BmsI GCATC 6 cut(s) 157, 286, 600, 895, 949, 1156
BmtI GCTAGC 1 cut(s) 1049
BmuI ACTGGG 1 cut(s) 1026
BpiI GAAGAC 3 cut(s) 873, 903, 1028
BplI GAGNNNNNCTC 2 cut(s) 1117, 1149
BpuMI CCSGG 1 cut(s) 1119
BsaAI YACGTR 1 cut(s) 413
BsaBI GATNNNNATC 1 cut(s) 300
BsaJI CCNNGG 4 cut(s) 215, 398, 854, 1583
BsaWI WCCGGW 1 cut(s) 1564
Bsc4I CCNNNNNNNGG 5 cut(s) 428, 725, 948, 1125, 1328
Bse1I ACTGG 2 cut(s) 339, 1021
Bse3DI GCAATG 1 cut(s) 1040
Bse8I GATNNNNATC 1 cut(s) 300
BseBI CCWGG 1 cut(s) 1008
BseDI CCNNGG 4 cut(s) 215, 398, 854, 1583
BseGI GGATG 7 cut(s) 82, 151, 376, 615, 691, 964, 1315
BseJI GATNNNNATC 1 cut(s) 300
BseLI CCNNNNNNNGG 5 cut(s) 428, 725, 948, 1125, 1328
BseMI GCAATG 1 cut(s) 1040
BseMII CTCAG 1 cut(s) 1451
BseNI ACTGG 2 cut(s) 339, 1021
BseRI GAGGAG 3 cut(s) 95, 164, 640
BseXI GCAGC 2 cut(s) 548, 1090
BshFI GGCC 1 cut(s) 596
BshNI GGYRCC 1 cut(s) 1249
BsiSI CCGG 2 cut(s) 1119, 1565
BslI CCNNNNNNNGG 5 cut(s) 428, 725, 948, 1125, 1328
BsmAI GTCTC 5 cut(s) 310, 421, 1293, 1450, 1456
BsmBI CGTCTC 1 cut(s) 310
BsmI GAATGC 2 cut(s) 855, 1574
BsnI GGCC 1 cut(s) 596
Bsp1407I TGTACA 2 cut(s) 176, 651
Bsp143I GATC 6 cut(s) 43, 479, 936, 951, 1285, 1475
Bsp19I CCATGG 2 cut(s) 398, 1583
BspACI CCGC 2 cut(s) 916, 1122
BspANI GGCC 1 cut(s) 596
BspCNI CTCAG 1 cut(s) 1452
BspLI GGNNCC 5 cut(s) 84, 153, 387, 1251, 1581
BspMI ACCTGC 1 cut(s) 453
BspOI GCTAGC 1 cut(s) 1049
BspPI GGATC 3 cut(s) 944, 959, 1470
BspT107I GGYRCC 1 cut(s) 1249
BsrDI GCAATG 1 cut(s) 1040
BsrGI TGTACA 2 cut(s) 176, 651
BsrI ACTGG 2 cut(s) 339, 1021
BssECI CCNNGG 4 cut(s) 215, 398, 854, 1583
BssMI GATC 6 cut(s) 43, 479, 936, 951, 1285, 1475
BssT1I CCWWGG 4 cut(s) 215, 398, 854, 1583
Bst2UI CCWGG 1 cut(s) 1008
Bst4CI ACNGT 6 cut(s) 283, 377, 423, 502, 582, 1037
BstAUI TGTACA 2 cut(s) 176, 651
BstBAI YACGTR 1 cut(s) 413
BstC8I GCNNGC 2 cut(s) 534, 1047
BstDEI CTNAG 2 cut(s) 1078, 1460
BstDSI CCRYGG 2 cut(s) 398, 1583
BstENI CCTNNNNNAGG 1 cut(s) 946
BstF5I GGATG 7 cut(s) 82, 151, 376, 615, 691, 964, 1315
BstKTI GATC 6 cut(s) 46, 482, 939, 954, 1288, 1478
BstMAI GTCTC 5 cut(s) 310, 421, 1293, 1450, 1456
BstMBI GATC 6 cut(s) 43, 479, 936, 951, 1285, 1475
BstMWI GCNNNNNNNGC 3 cut(s) 252, 1046, 1527
BstNI CCWGG 1 cut(s) 1008
BstNSI RCATGY 1 cut(s) 1271
BstSCI CCNGG 2 cut(s) 1006, 1117
BstV1I GCAGC 2 cut(s) 548, 1090
BstV2I GAAGAC 3 cut(s) 873, 903, 1028
BstX2I RGATCY 1 cut(s) 1475
BstXI CCANNNNNNTGG 1 cut(s) 1604
BstYI RGATCY 1 cut(s) 1475
BsuI GTATCC 1 cut(s) 584
BsuRI GGCC 1 cut(s) 596
BtgI CCRYGG 2 cut(s) 398, 1583
BtsCI GGATG 7 cut(s) 82, 151, 376, 615, 691, 964, 1315
BtsI GCAGTG 1 cut(s) 177
BtsIMutI CAGTG 3 cut(s) 177, 279, 587
BveI ACCTGC 1 cut(s) 453
Cac8I GCNNGC 2 cut(s) 534, 1047
Cfr13I GGNCC 3 cut(s) 194, 473, 1004
CseI GACGC 1 cut(s) 1158
Csp6I GTAC 5 cut(s) 177, 338, 652, 773, 881
CviQI GTAC 5 cut(s) 177, 338, 652, 773, 881
DdeI CTNAG 2 cut(s) 1078, 1460
DpnI GATC 6 cut(s) 45, 481, 938, 953, 1287, 1477
DpnII GATC 6 cut(s) 43, 479, 936, 951, 1285, 1475
DraI TTTAAA 1 cut(s) 765
DrdI GACNNNNNNGTC 1 cut(s) 324
DseDI GACNNNNNNGTC 1 cut(s) 324
Eco130I CCWWGG 4 cut(s) 215, 398, 854, 1583
Eco147I AGGCCT 1 cut(s) 596
Eco47I GGWCC 3 cut(s) 194, 473, 1004
EcoNI CCTNNNNNAGG 1 cut(s) 946
EcoRII CCWGG 1 cut(s) 1006
EcoT14I CCWWGG 4 cut(s) 215, 398, 854, 1583
EcoT22I ATGCAT 2 cut(s) 301, 1574
ErhI CCWWGG 4 cut(s) 215, 398, 854, 1583
Esp3I CGTCTC 1 cut(s) 310
FalI AAGNNNNNCTT 2 cut(s) 858, 890
FauI CCCGC 1 cut(s) 1115
FauNDI CATATG 2 cut(s) 70, 183
FblI GTMKAC 2 cut(s) 349, 1314
Fnu4HI GCNGC 2 cut(s) 537, 1104
FokI GGATG 7 cut(s) 89, 158, 383, 622, 698, 971, 1322
Fsp4HI GCNGC 2 cut(s) 537, 1104
FspBI CTAG 4 cut(s) 557, 833, 1046, 1140
GluI GCNGC 2 cut(s) 537, 1104
HaeIII GGCC 1 cut(s) 596
HapII CCGG 2 cut(s) 1119, 1565
HgaI GACGC 1 cut(s) 1158
HincII GTYRAC 1 cut(s) 1315
HindII GTYRAC 1 cut(s) 1315
HindIII AAGCTT 1 cut(s) 20
HinfI GANTC 3 cut(s) 187, 1150, 1223
HpaII CCGG 2 cut(s) 1119, 1565
HphI GGTGA 3 cut(s) 411, 443, 740
Hpy166II GTNNAC 6 cut(s) 177, 179, 332, 350, 652, 1315
Hpy188I TCNGA 6 cut(s) 34, 315, 578, 674, 969, 1399
Hpy188III TCNNGA 4 cut(s) 488, 846, 1095, 1140
Hpy8I GTNNAC 6 cut(s) 177, 179, 332, 350, 652, 1315
HpyAV CCTTC 3 cut(s) 422, 464, 729
HpyCH4III ACNGT 6 cut(s) 283, 377, 423, 502, 582, 1037
HpyCH4IV ACGT 1 cut(s) 412
HpyF10VI GCNNNNNNNGC 3 cut(s) 252, 1046, 1527
HpyF3I CTNAG 2 cut(s) 1078, 1460
HpySE526I ACGT 1 cut(s) 412
Kzo9I GATC 6 cut(s) 43, 479, 936, 951, 1285, 1475
LmnI GCTCC 5 cut(s) 82, 127, 151, 829, 1527
Lsp1109I GCAGC 2 cut(s) 548, 1090
LweI GCATC 6 cut(s) 157, 286, 600, 895, 949, 1156
MaeI CTAG 4 cut(s) 557, 833, 1046, 1140
MaeII ACGT 1 cut(s) 412
MaeIII GTNAC 1 cut(s) 637
MalI GATC 6 cut(s) 45, 481, 938, 953, 1287, 1477
MboI GATC 6 cut(s) 43, 479, 936, 951, 1285, 1475
MfeI CAATTG 1 cut(s) 909
MflI RGATCY 1 cut(s) 1475
MmeI TCCRAC 2 cut(s) 570, 601
Mph1103I ATGCAT 2 cut(s) 301, 1574
MroXI GAANNNNTTC 2 cut(s) 693, 1404
MseI TTAA 9 cut(s) 24, 210, 459, 504, 764, 921, 945, 986, 1146
MslI CAYNNNNRTG 4 cut(s) 144, 1177, 1266, 1606
MspI CCGG 2 cut(s) 1119, 1565
MspR9I CCNGG 2 cut(s) 1008, 1119
MunI CAATTG 1 cut(s) 909
Mva1269I GAATGC 2 cut(s) 855, 1574
MvaI CCWGG 1 cut(s) 1008
MwoI GCNNNNNNNGC 3 cut(s) 252, 1046, 1527
NciI CCSGG 1 cut(s) 1119
NcoI CCATGG 2 cut(s) 398, 1583
NdeI CATATG 2 cut(s) 70, 183
NdeII GATC 6 cut(s) 43, 479, 936, 951, 1285, 1475
NheI GCTAGC 1 cut(s) 1045
NlaIV GGNNCC 5 cut(s) 84, 153, 387, 1251, 1581
NmuCI GTSAC 1 cut(s) 637
NsiI ATGCAT 2 cut(s) 301, 1574
NspI RCATGY 1 cut(s) 1271
PceI AGGCCT 1 cut(s) 596
PciI ACATGT 1 cut(s) 1267
PcsI WCGNNNNNNNCGW 2 cut(s) 325, 876
PctI GAATGC 2 cut(s) 855, 1574
PdmI GAANNNNTTC 2 cut(s) 693, 1404
PfeI GAWTC 3 cut(s) 187, 1150, 1223
PflMI CCANNNNNTGG 1 cut(s) 1328
PkrI GCNGC 2 cut(s) 538, 1105
Ppu21I YACGTR 1 cut(s) 413
PscI ACATGT 1 cut(s) 1267
PshBI ATTAAT 1 cut(s) 986
Psp6I CCWGG 1 cut(s) 1006
PspGI CCWGG 1 cut(s) 1006
PspN4I GGNNCC 5 cut(s) 84, 153, 387, 1251, 1581
PspPI GGNCC 3 cut(s) 194, 473, 1004
PsrI GAACNNNNNNTAC 2 cut(s) 864, 896
PsuI RGATCY 1 cut(s) 1475
RsaI GTAC 5 cut(s) 178, 339, 653, 774, 882
RsaNI GTAC 5 cut(s) 177, 338, 652, 773, 881
RseI CAYNNNNRTG 4 cut(s) 144, 1177, 1266, 1606
SalI GTCGAC 1 cut(s) 1313
SaqAI TTAA 9 cut(s) 24, 210, 459, 504, 764, 921, 945, 986, 1146
SatI GCNGC 2 cut(s) 537, 1104
Sau3AI GATC 6 cut(s) 43, 479, 936, 951, 1285, 1475
Sau96I GGNCC 3 cut(s) 194, 473, 1004
ScaI AGTACT 1 cut(s) 774
ScrFI CCNGG 2 cut(s) 1008, 1119
SfaNI GCATC 6 cut(s) 157, 286, 600, 895, 949, 1156
SinI GGWCC 3 cut(s) 194, 473, 1004
SmiI ATTTAAAT 1 cut(s) 765
SmiMI CAYNNNNRTG 4 cut(s) 144, 1177, 1266, 1606
SseBI AGGCCT 1 cut(s) 596
SsiI CCGC 2 cut(s) 916, 1122
SspI AATATT 1 cut(s) 990
SspMI CTAG 4 cut(s) 557, 833, 1046, 1140
StuI AGGCCT 1 cut(s) 596
StyD4I CCNGG 2 cut(s) 1006, 1117
StyI CCWWGG 4 cut(s) 215, 398, 854, 1583
SwaI ATTTAAAT 1 cut(s) 765
TaaI ACNGT 6 cut(s) 283, 377, 423, 502, 582, 1037
TaiI ACGT 1 cut(s) 415
TaqI TCGA 4 cut(s) 1226, 1264, 1288, 1314
TatI WGTACW 3 cut(s) 176, 651, 772
TfiI GAWTC 3 cut(s) 187, 1150, 1223
Tru1I TTAA 9 cut(s) 24, 210, 459, 504, 764, 921, 945, 986, 1146
Tru9I TTAA 9 cut(s) 24, 210, 459, 504, 764, 921, 945, 986, 1146
TscAI CASTG 3 cut(s) 177, 286, 587
TseFI GTSAC 1 cut(s) 637
TseI GCWGC 2 cut(s) 536, 1103
Tsp45I GTSAC 1 cut(s) 637
TspDTI ATGAA 6 cut(s) 51, 179, 245, 441, 702, 711
TspGWI ACGGA 2 cut(s) 842, 868
TspRI CASTG 3 cut(s) 177, 286, 587
Van91I CCANNNNNTGG 1 cut(s) 1328
VpaK11BI GGWCC 3 cut(s) 194, 473, 1004
VspI ATTAAT 1 cut(s) 986
XagI CCTNNNNNAGG 1 cut(s) 946
XapI RAATTY 5 cut(s) 113, 274, 437, 689, 841
XbaI TCTAGA 1 cut(s) 1139
XceI RCATGY 1 cut(s) 1271
XmiI GTMKAC 2 cut(s) 349, 1314
XmnI GAANNNNTTC 2 cut(s) 693, 1404
XspI CTAG 4 cut(s) 557, 833, 1046, 1140
ZrmI AGTACT 1 cut(s) 774
Zsp2I ATGCAT 2 cut(s) 301, 1574
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.