Rmu_sc0009472.1_g000020

Helicase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009472.1
OG0000080
Physical Location & Seq
Forward (+)
59433 .. 60926
1494 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009472.1_g000020.1.cds

Sequence Viewer

Length: 1494 bp
atgactcaagatggtggtgaaaattcttcaatgccgaggctaatacaagatgaaatttcaattaacattcctcaagaagactgtgatgcagttcatcatttgaatgaggatcaaacttttgcatacaattccataatatctgctattgagtgtcatgacaatgccatatatttcgttgatggtccaggaggaactggaaagacatacttatatcgtgcattattagcaagcttgagaagcattgatcacattgtattggcaacagcaacttctggcatagcagcaacaatactacctggtgggaggacagcacactctaggtttaaaattcctcttaatcttgatgcatcttcgacatgctccattagtaaacagtctgatttagcagagttgatcagaaagtcatcggcaattatttgggatgaagcaccaatgatgaatcgatatgggtttgaagctcttgatcgaacatttagagacataacaagtgtcgatttgccatttggaggaaaggtgatgatcttcgggggcgatttccgacaagttcttcctgttatccataagggtacgagatctgagatggtgcaagccagtttgattaatgcttcattttggaaggatgtgaagattcttcgtttgacacagaatatgagatccatcaatgatccatatttctcagagttcttacttcgtgttggtaatggagaacaaccaactgtcgttgaagacataatacaaataccgttgcccatggtcatatcatgggagaatgaagaatcaatcaaccagttggttaatcaagtcttccctaatttggatcgtcatgtaaatgataccaagtacatggttgaaagggcaataattactccaaaaaatgatgatgttgacgtactcaatgaaagaatcatacaacaatttccggggcctgaacgaatcttatactcttttgactcagttgaggatgacaccagaaatatgtatcaacaagaatttttaaattcgatttcaccttctggtatgccgccacatcagttgattataaagaaaggtgccccaattatgcttttgagaaatattgacccaaagatgggattgttcaacggtacaaggttgacttgccgaggagcatataacaatctaattgatgcagagattttaactggacaattttcgggaactagagttttcttgccaagaattgctcttaagagtgccgaaagttctggactctcttttgagatgacaagaaagcagtttcccgtaaagttgagttttgcacttaccataaataaatcacaagggcagacaataccgaatgttggtatttaccttcctgatcatgtgtttagccatggacagctatacgtggctttatcgagaggagtttcagaggcaagcaccaaatttttggtaaaagaaggttcattagagggtgaggaaggggtattcacagcaaacgttgtgtataaagaaattttgcttccttccacataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

497

Amino Acids

55.4

Weight (kDa)

5.41

Isoelectric Point (pI)

40.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1040
AccB1I GGYRCC 1 cut(s) 1049
AciI CCGC 1 cut(s) 1022
AclI AACGTT 1 cut(s) 1458
AclWI GGATC 4 cut(s) 117, 648, 659, 825
AcsI RAATTY 7 cut(s) 22, 54, 327, 989, 997, 1403, 1473
AfaI GTAC 4 cut(s) 568, 842, 891, 1105
AfiI CCNNNNNNNGG 5 cut(s) 506, 814, 1087, 1088, 1319
AflII CTTAAG 1 cut(s) 1205
AgsI TTSAA 7 cut(s) 30, 60, 103, 455, 725, 851, 1099
AjnI CCWGG 2 cut(s) 184, 295
AluBI AGCT 3 cut(s) 231, 458, 1360
AluI AGCT 3 cut(s) 231, 458, 1360
Alw26I GTCTC 1 cut(s) 471
AlwI GGATC 4 cut(s) 117, 648, 659, 825
AoxI GGCC 1 cut(s) 923
ApeKI GCWGC 1 cut(s) 281
ApoI RAATTY 7 cut(s) 22, 54, 327, 989, 997, 1403, 1473
AseI ATTAAT 1 cut(s) 600
AspS9I GGNCC 2 cut(s) 182, 923
AsuC2I CCSGG 1 cut(s) 921
AsuHPI GGTGA 4 cut(s) 29, 526, 999, 1445
AvaII GGWCC 1 cut(s) 182
BaeGI GKGCMC 1 cut(s) 1054
BanI GGYRCC 1 cut(s) 1049
BarI GAAGNNNNNNTAC 2 cut(s) 717, 749
BbsI GAAGAC 3 cut(s) 84, 732, 796
BbvI GCAGC 1 cut(s) 293
BccI CCATC 5 cut(s) 5, 173, 574, 665, 1081
BciT130I CCWGG 2 cut(s) 186, 297
BclI TGATCA 3 cut(s) 244, 393, 1336
BcnI CCSGG 1 cut(s) 921
BcoDI GTCTC 1 cut(s) 471
BfaI CTAG 2 cut(s) 318, 1179
BfrI CTTAAG 1 cut(s) 1205
BglII AGATCT 1 cut(s) 572
BisI GCNGC 2 cut(s) 282, 1022
BlsI GCNGC 2 cut(s) 283, 1023
Bme1390I CCNGG 3 cut(s) 186, 297, 921
Bme18I GGWCC 1 cut(s) 182
BmgT120I GGNCC 2 cut(s) 182, 923
BmiI GGNNCC 2 cut(s) 924, 1051
BmrFI CCNGG 3 cut(s) 186, 297, 921
BmsI GCATC 4 cut(s) 76, 334, 356, 1135
BpiI GAAGAC 3 cut(s) 84, 732, 796
BpuEI CTTGAG 2 cut(s) 57, 253
BpuMI CCSGG 1 cut(s) 921
Bsa29I ATCGAT 1 cut(s) 442
BsaAI YACGTR 1 cut(s) 1366
BsaJI CCNNGG 5 cut(s) 35, 750, 920, 1120, 1351
BsaXI ACNNNNNCTCC 2 cut(s) 498, 528
Bsc4I CCNNNNNNNGG 5 cut(s) 506, 814, 1087, 1088, 1319
Bse1I ACTGG 4 cut(s) 199, 591, 787, 1165
BseBI CCWGG 2 cut(s) 186, 297
BseCI ATCGAT 1 cut(s) 442
BseDI CCNNGG 5 cut(s) 35, 750, 920, 1120, 1351
BseGI GGATG 3 cut(s) 427, 625, 967
BseLI CCNNNNNNNGG 5 cut(s) 506, 814, 1087, 1088, 1319
BseMII CTCAG 3 cut(s) 567, 690, 966
BseNI ACTGG 4 cut(s) 199, 591, 787, 1165
BseRI GAGGAG 2 cut(s) 1137, 1395
BseSI GKGCMC 1 cut(s) 1054
BseXI GCAGC 1 cut(s) 293
BshFI GGCC 1 cut(s) 925
BshNI GGYRCC 1 cut(s) 1049
BshVI ATCGAT 1 cut(s) 442
BsiSI CCGG 1 cut(s) 920
BslI CCNNNNNNNGG 5 cut(s) 506, 814, 1087, 1088, 1319
BsmAI GTCTC 1 cut(s) 471
BsnI GGCC 1 cut(s) 925
Bsp1286I GDGCHC 1 cut(s) 1054
Bsp19I CCATGG 2 cut(s) 750, 1351
BspACI CCGC 1 cut(s) 1022
BspANI GGCC 1 cut(s) 925
BspCNI CTCAG 3 cut(s) 568, 689, 965
BspDI ATCGAT 1 cut(s) 442
BspHI TCATGA 1 cut(s) 154
BspLI GGNNCC 2 cut(s) 924, 1051
BspPI GGATC 4 cut(s) 117, 648, 659, 825
BspT107I GGYRCC 1 cut(s) 1049
BspTI CTTAAG 1 cut(s) 1205
BsrI ACTGG 4 cut(s) 199, 591, 787, 1165
BssECI CCNNGG 5 cut(s) 35, 750, 920, 1120, 1351
BssT1I CCWWGG 2 cut(s) 750, 1351
Bst2UI CCWGG 2 cut(s) 186, 297
Bst4CI ACNGT 5 cut(s) 83, 375, 718, 744, 1103
BstAFI CTTAAG 1 cut(s) 1205
BstBAI YACGTR 1 cut(s) 1366
BstC8I GCNNGC 3 cut(s) 229, 588, 1396
BstDEI CTNAG 3 cut(s) 576, 676, 952
BstDSI CCRYGG 2 cut(s) 750, 1351
BstF5I GGATG 3 cut(s) 427, 625, 967
BstMAI GTCTC 1 cut(s) 471
BstMWI GCNNNNNNNGC 2 cut(s) 224, 237
BstNI CCWGG 2 cut(s) 186, 297
BstNSI RCATGY 1 cut(s) 360
BstSCI CCNGG 3 cut(s) 184, 295, 919
BstSLI GKGCMC 1 cut(s) 1054
BstV1I GCAGC 1 cut(s) 293
BstV2I GAAGAC 3 cut(s) 84, 732, 796
BstX2I RGATCY 2 cut(s) 572, 653
BstXI CCANNNNNNTGG 2 cut(s) 844, 1408
BstYI RGATCY 2 cut(s) 572, 653
Bsu15I ATCGAT 1 cut(s) 442
BsuRI GGCC 1 cut(s) 925
BsuTUI ATCGAT 1 cut(s) 442
BtgI CCRYGG 2 cut(s) 750, 1351
BtsCI GGATG 3 cut(s) 427, 625, 967
Cac8I GCNNGC 3 cut(s) 229, 588, 1396
CciI TCATGA 1 cut(s) 154
Cfr13I GGNCC 2 cut(s) 182, 923
ClaI ATCGAT 1 cut(s) 442
CsiI ACCWGGT 1 cut(s) 295
Csp6I GTAC 4 cut(s) 567, 841, 890, 1104
CspCI CAANNNNNGTGG 2 cut(s) 1014, 1049
CviAII CATG 8 cut(s) 155, 357, 751, 762, 824, 844, 1340, 1352
CviJI RGCY 8 cut(s) 40, 231, 458, 590, 925, 1350, 1360, 1370
CviKI_1 RGCY 8 cut(s) 40, 231, 458, 590, 925, 1350, 1360, 1370
CviQI GTAC 4 cut(s) 567, 841, 890, 1104
DdeI CTNAG 3 cut(s) 576, 676, 952
DraI TTTAAA 2 cut(s) 325, 996
Eco130I CCWWGG 2 cut(s) 750, 1351
Eco47I GGWCC 1 cut(s) 182
EcoO109I RGGNCCY 1 cut(s) 923
EcoRII CCWGG 2 cut(s) 184, 295
EcoT14I CCWWGG 2 cut(s) 750, 1351
EcoT22I ATGCAT 1 cut(s) 349
ErhI CCWWGG 2 cut(s) 750, 1351
FaeI CATG 8 cut(s) 158, 360, 754, 765, 827, 847, 1343, 1355
FalI AAGNNNNNCTT 4 cut(s) 191, 223, 1099, 1131
FatI CATG 8 cut(s) 154, 356, 750, 761, 823, 843, 1339, 1351
FbaI TGATCA 3 cut(s) 244, 393, 1336
Fnu4HI GCNGC 2 cut(s) 282, 1022
FokI GGATG 3 cut(s) 434, 632, 974
Fsp4HI GCNGC 2 cut(s) 282, 1022
FspBI CTAG 2 cut(s) 318, 1179
GluI GCNGC 2 cut(s) 282, 1022
HaeIII GGCC 1 cut(s) 925
HapII CCGG 1 cut(s) 920
Hin1II CATG 8 cut(s) 158, 360, 754, 765, 827, 847, 1343, 1355
HincII GTYRAC 2 cut(s) 886, 1113
HindII GTYRAC 2 cut(s) 886, 1113
HindIII AAGCTT 1 cut(s) 229
HinfI GANTC 8 cut(s) 4, 439, 628, 776, 903, 933, 950, 1227
HpaII CCGG 1 cut(s) 920
HphI GGTGA 4 cut(s) 29, 526, 999, 1445
Hpy166II GTNNAC 3 cut(s) 371, 886, 1113
Hpy188I TCNGA 6 cut(s) 379, 398, 539, 577, 679, 1390
Hpy188III TCNNGA 9 cut(s) 8, 74, 155, 341, 461, 1173, 1224, 1334, 1377
Hpy8I GTNNAC 3 cut(s) 371, 886, 1113
HpyAV CCTTC 6 cut(s) 610, 1020, 1340, 1412, 1433, 1494
HpyCH4III ACNGT 5 cut(s) 83, 375, 718, 744, 1103
HpyCH4IV ACGT 3 cut(s) 888, 1365, 1458
HpyCH4V TGCA 7 cut(s) 89, 122, 218, 347, 586, 1148, 1277
HpyF10VI GCNNNNNNNGC 2 cut(s) 224, 237
HpyF3I CTNAG 3 cut(s) 576, 676, 952
HpySE526I ACGT 3 cut(s) 888, 1365, 1458
Hsp92II CATG 8 cut(s) 158, 360, 754, 765, 827, 847, 1343, 1355
Ksp22I TGATCA 3 cut(s) 244, 393, 1336
LmnI GCTCC 2 cut(s) 365, 1124
Lsp1109I GCAGC 1 cut(s) 293
LweI GCATC 4 cut(s) 76, 334, 356, 1135
MabI ACCWGGT 1 cut(s) 295
MaeI CTAG 2 cut(s) 318, 1179
MaeII ACGT 3 cut(s) 888, 1365, 1458
MflI RGATCY 2 cut(s) 572, 653
MhlI GDGCHC 1 cut(s) 1054
MlyI GAGTC 2 cut(s) 944, 1221
MmeI TCCRAC 1 cut(s) 562
Mph1103I ATGCAT 1 cut(s) 349
MseI TTAA 8 cut(s) 63, 324, 336, 600, 795, 995, 1157, 1206
MslI CAYNNNNRTG 3 cut(s) 102, 159, 828
MspCI CTTAAG 1 cut(s) 1205
MspI CCGG 1 cut(s) 920
MspR9I CCNGG 3 cut(s) 186, 297, 921
MvaI CCWGG 2 cut(s) 186, 297
MwoI GCNNNNNNNGC 2 cut(s) 224, 237
NciI CCSGG 1 cut(s) 921
NcoI CCATGG 2 cut(s) 750, 1351
NlaIII CATG 8 cut(s) 158, 360, 754, 765, 827, 847, 1343, 1355
NlaIV GGNNCC 2 cut(s) 924, 1051
NmeAIII GCCGAG 2 cut(s) 60, 1145
NsiI ATGCAT 1 cut(s) 349
NspI RCATGY 1 cut(s) 360
PagI TCATGA 1 cut(s) 154
PfeI GAWTC 5 cut(s) 439, 628, 776, 903, 933
PfoI TCCNGGA 1 cut(s) 184
PkrI GCNGC 2 cut(s) 283, 1023
PleI GAGTC 2 cut(s) 944, 1221
PpsI GAGTC 2 cut(s) 944, 1221
Ppu21I YACGTR 1 cut(s) 1366
PshBI ATTAAT 1 cut(s) 600
PsiI TTATAA 1 cut(s) 1040
Psp1406I AACGTT 1 cut(s) 1458
Psp6I CCWGG 2 cut(s) 184, 295
PspGI CCWGG 2 cut(s) 184, 295
PspN4I GGNNCC 2 cut(s) 924, 1051
PspPI GGNCC 2 cut(s) 182, 923
PsuI RGATCY 2 cut(s) 572, 653
RsaI GTAC 4 cut(s) 568, 842, 891, 1105
RsaNI GTAC 4 cut(s) 567, 841, 890, 1104
RseI CAYNNNNRTG 3 cut(s) 102, 159, 828
SaqAI TTAA 8 cut(s) 63, 324, 336, 600, 795, 995, 1157, 1206
SatI GCNGC 2 cut(s) 282, 1022
Sau96I GGNCC 2 cut(s) 182, 923
SchI GAGTC 2 cut(s) 944, 1221
ScrFI CCNGG 3 cut(s) 186, 297, 921
SduI GDGCHC 1 cut(s) 1054
SexAI ACCWGGT 1 cut(s) 295
SfaNI GCATC 4 cut(s) 76, 334, 356, 1135
SinI GGWCC 1 cut(s) 182
SmiMI CAYNNNNRTG 3 cut(s) 102, 159, 828
SmlI CTYRAG 4 cut(s) 6, 72, 232, 1205
SmoI CTYRAG 4 cut(s) 6, 72, 232, 1205
SsiI CCGC 1 cut(s) 1022
SspI AATATT 1 cut(s) 1075
SspMI CTAG 2 cut(s) 318, 1179
StyD4I CCNGG 3 cut(s) 184, 295, 919
StyI CCWWGG 2 cut(s) 750, 1351
TaaI ACNGT 5 cut(s) 83, 375, 718, 744, 1103
TaiI ACGT 3 cut(s) 891, 1368, 1461
TaqI TCGA 6 cut(s) 353, 442, 466, 492, 1001, 1376
TatI WGTACW 1 cut(s) 840
TauI GCSGC 1 cut(s) 1024
TfiI GAWTC 5 cut(s) 439, 628, 776, 903, 933
Tru1I TTAA 8 cut(s) 63, 324, 336, 600, 795, 995, 1157, 1206
Tru9I TTAA 8 cut(s) 63, 324, 336, 600, 795, 995, 1157, 1206
TseI GCWGC 1 cut(s) 281
TspDTI ATGAA 8 cut(s) 66, 83, 438, 452, 597, 786, 912, 1413
Vha464I CTTAAG 1 cut(s) 1205
VpaK11BI GGWCC 1 cut(s) 182
VspI ATTAAT 1 cut(s) 600
XapI RAATTY 7 cut(s) 22, 54, 327, 989, 997, 1403, 1473
XceI RCATGY 1 cut(s) 360
XspI CTAG 2 cut(s) 318, 1179
Zsp2I ATGCAT 1 cut(s) 349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.