Rorug03G0286100

G-quadruplex DNA unwinding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000080
Physical Location & Seq
Forward (+)
28822665 .. 28825402
2738 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0286100.1

Sequence Viewer

Length: 1209 bp
ATGGAGAATGAACCTTTTCTCTCCTCCCCACCCCCACCCCCACTTGAACCCATCATTGAGGACCCTCATGATTTCTCTTTCAATCTCCCTCCTCCCCACACCGACCCAATTGCGCTTCTCTTACAAGAACCCCCACACCAACATGATGAAATACACCAAGACCCACATCCCTCTTCATCGTCTTCCTCATCTTCCGGACCCCGGCATGCCCCGACCCGCAAACCCACCATTCTCCAGCGATGCAAGACCGCCCCGGCCATGGCTGTCATGCGAGACCTGAAGCCAAAGACCGCCCAGGTCCCCAAGCCACAGTCCGAGACCAGCTCCATCATCATCAGACAAGCTGTGTTGTTACTTGTCATGTATCTCTCTCTCGGTGTTGTAATATACTCTTTCAACAGGGACAAGTTCTCCGGTACGGAAACCCACCCGGTGGTTGACGCCCTCTACTTTTGTATAGTCACTATGTGCACGATTGGGTACGGCGACATTGCTCCGGAAACGCCGCTGGCTAAGGTGTTTTCGTGTGTGTTTGTGTTGGTGGGGTTTGGGTTTATTGACATCTTGCTTAGTGGGGTGGTCAATTATGTGCTGGACTTGCAAGAGAACATAATCTTGACCGGAATCCAAATGAGTCATCACCACCACCACCACCACCACCACCATGGATTTTCGGACTACATTGTTGATGTGGCCAAGGGGAGGATGAGGATCAGACTCAAGGTGGGTCTGGCGCTTGGTGTGGTGGTGATGTGCATTGGCATGGGGGCTCTGGTTTTGTGTTTCTTGGAGGATTTGGAATGGGTTGATTCCATTTATTTGTCTGTTATGTCGGTTACAACTGTTGGGTATGGGGACAAGGCCTTCAAGTCGCTGCCGGGGCGGCTTTTCGCGGCGGTTTGGCTTCTGTTTTCGACACTGGCGGTGGCGAGAGCCTTTTTGTATTTGGCAGAGGCGAGGGTGGATAAGAGACACAGGAAAATTGTCAACTGGGTATTGCATAGGGAGATCACTGTCCAGGATTTGCTTGCTGCTGACATCAATAACCATGGCTTCATCAGCAAATCAGAGTATATTGTTTACAAGCTCAAAGAGATGGGAAAGATAGATGAGAAAGATATAATGCAAATCTGCGATCAGTTCAGTAAGCTTGATTCAAACCACTCTGGGAAGATAACACTGCCCGATTTGTTGGAGAATCGCTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

402

Amino Acids

45.02

Weight (kDa)

6.41

Isoelectric Point (pI)

34.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 116 - 196 7.9e-07 Ion transport protein
Ion_trans_2 PF07885 118 - 197 1.8e-16 Ion channel
Ion_trans_2 PF07885 249 - 318 1.5e-11 Ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 433
AccII CGCG 1 cut(s) 893
AccIII TCCGGA 2 cut(s) 194, 496
AciI CCGC 8 cut(s) 217, 249, 291, 506, 883, 893, 896, 923
AclWI GGATC 1 cut(s) 719
AcoI YGGCCR 2 cut(s) 255, 693
AcuI CTGAAG 1 cut(s) 299
AcyI GRCGYC 1 cut(s) 441
AdeI CACNNNGTG 2 cut(s) 433, 468
AfaI GTAC 2 cut(s) 418, 482
AfiI CCNNNNNNNGG 4 cut(s) 201, 259, 433, 702
AgsI TTSAA 5 cut(s) 47, 82, 397, 868, 1158
AjnI CCWGG 2 cut(s) 294, 1017
AluBI AGCT 4 cut(s) 324, 344, 1087, 1150
AluI AGCT 4 cut(s) 324, 344, 1087, 1150
Alw21I GWGCWC 1 cut(s) 473
Alw26I GTCTC 3 cut(s) 267, 311, 964
Alw44I GTGCAC 1 cut(s) 469
AlwI GGATC 1 cut(s) 719
Aor13HI TCCGGA 2 cut(s) 194, 496
AoxI GGCC 3 cut(s) 255, 693, 861
ApaLI GTGCAC 1 cut(s) 469
ApeKI GCWGC 2 cut(s) 874, 1031
Asp700I GAANNNNTTC 2 cut(s) 15, 1202
AspLEI GCGC 2 cut(s) 115, 736
AspS9I GGNCC 3 cut(s) 61, 197, 298
AsuC2I CCSGG 4 cut(s) 202, 254, 431, 879
AsuHPI GGTGA 2 cut(s) 632, 760
AvaII GGWCC 3 cut(s) 61, 197, 298
BaeGI GKGCMC 1 cut(s) 473
BalI TGGCCA 1 cut(s) 695
BanII GRGCYC 1 cut(s) 772
BbsI GAAGAC 1 cut(s) 174
Bbv12I GWGCWC 1 cut(s) 473
BbvI GCAGC 2 cut(s) 861, 1018
BccI CCATC 3 cut(s) 59, 335, 1090
BceAI ACGGC 1 cut(s) 499
BcgI CGANNNNNNTGC 2 cut(s) 92, 126
BciT130I CCWGG 2 cut(s) 296, 1019
BcnI CCSGG 4 cut(s) 202, 254, 431, 879
BcoDI GTCTC 3 cut(s) 267, 311, 964
BfoI RGCGCY 1 cut(s) 737
BglI GCCNNNNNGGC 1 cut(s) 883
BisI GCNGC 5 cut(s) 506, 875, 884, 894, 1032
BlsI GCNGC 5 cut(s) 507, 876, 885, 895, 1033
Bme1390I CCNGG 6 cut(s) 202, 254, 296, 431, 879, 1019
Bme18I GGWCC 3 cut(s) 61, 197, 298
BmgT120I GGNCC 3 cut(s) 61, 197, 298
BmiI GGNNCC 3 cut(s) 63, 199, 300
BmrFI CCNGG 6 cut(s) 202, 254, 296, 431, 879, 1019
BmrI ACTGGG 1 cut(s) 1000
BmsI GCATC 1 cut(s) 230
BmuI ACTGGG 1 cut(s) 1000
BpiI GAAGAC 1 cut(s) 174
BplI GAGNNNNNCTC 2 cut(s) 308, 340
BpmI CTGGAG 1 cut(s) 218
Bpu10I CCTNAGC 1 cut(s) 513
BpuEI CTTGAG 1 cut(s) 704
BpuMI CCSGG 4 cut(s) 202, 254, 431, 879
BsaBI GATNNNNATC 1 cut(s) 710
BsaHI GRCGYC 1 cut(s) 441
BsaI GGTCTC 2 cut(s) 267, 311
BsaJI CCNNGG 8 cut(s) 200, 252, 258, 294, 664, 696, 878, 1048
BsaWI WCCGGW 4 cut(s) 194, 413, 496, 620
BsaXI ACNNNNNCTCC 2 cut(s) 395, 425
Bsc4I CCNNNNNNNGG 4 cut(s) 201, 259, 433, 702
Bse1I ACTGG 2 cut(s) 924, 995
Bse3DI GCAATG 1 cut(s) 489
Bse8I GATNNNNATC 1 cut(s) 710
BseAI TCCGGA 2 cut(s) 194, 496
BseBI CCWGG 2 cut(s) 296, 1019
BseDI CCNNGG 8 cut(s) 200, 252, 258, 294, 664, 696, 878, 1048
BseGI GGATG 2 cut(s) 166, 711
BseJI GATNNNNATC 1 cut(s) 710
BseLI CCNNNNNNNGG 4 cut(s) 201, 259, 433, 702
BseMI GCAATG 1 cut(s) 489
BseNI ACTGG 2 cut(s) 924, 995
BseRI GAGGAG 2 cut(s) 13, 81
BseSI GKGCMC 1 cut(s) 473
BseXI GCAGC 2 cut(s) 861, 1018
Bsh1236I CGCG 1 cut(s) 893
BshFI GGCC 3 cut(s) 257, 695, 863
BsiHKAI GWGCWC 1 cut(s) 473
BsiSI CCGG 8 cut(s) 195, 202, 254, 414, 431, 497, 621, 878
BslFI GGGAC 3 cut(s) 284, 416, 869
BslI CCNNNNNNNGG 4 cut(s) 201, 259, 433, 702
BsmAI GTCTC 3 cut(s) 267, 311, 964
BsmFI GGGAC 3 cut(s) 284, 416, 869
BsnI GGCC 3 cut(s) 257, 695, 863
Bso31I GGTCTC 2 cut(s) 267, 311
Bsp1286I GDGCHC 2 cut(s) 473, 772
Bsp13I TCCGGA 2 cut(s) 194, 496
Bsp143I GATC 3 cut(s) 711, 1008, 1135
Bsp19I CCATGG 3 cut(s) 258, 664, 1048
BspACI CCGC 8 cut(s) 217, 249, 291, 506, 883, 893, 896, 923
BspANI GGCC 3 cut(s) 257, 695, 863
BspEI TCCGGA 2 cut(s) 194, 496
BspFNI CGCG 1 cut(s) 893
BspHI TCATGA 1 cut(s) 67
BspLI GGNNCC 3 cut(s) 63, 199, 300
BspPI GGATC 1 cut(s) 719
BspTNI GGTCTC 2 cut(s) 267, 311
BsrDI GCAATG 1 cut(s) 489
BsrI ACTGG 2 cut(s) 924, 995
BssECI CCNNGG 8 cut(s) 200, 252, 258, 294, 664, 696, 878, 1048
BssMI GATC 3 cut(s) 711, 1008, 1135
BssNI GRCGYC 1 cut(s) 441
BssT1I CCWWGG 4 cut(s) 258, 664, 696, 1048
Bst2UI CCWGG 2 cut(s) 296, 1019
Bst4CI ACNGT 3 cut(s) 312, 844, 1015
Bst6I CTCTTC 1 cut(s) 178
BstACI GRCGYC 1 cut(s) 441
BstC8I GCNNGC 3 cut(s) 207, 510, 1029
BstDEI CTNAG 2 cut(s) 513, 569
BstDSI CCRYGG 3 cut(s) 258, 664, 1048
BstF5I GGATG 2 cut(s) 166, 711
BstFNI CGCG 1 cut(s) 893
BstH2I RGCGCY 1 cut(s) 737
BstHHI GCGC 2 cut(s) 115, 736
BstKTI GATC 3 cut(s) 714, 1011, 1138
BstMAI GTCTC 3 cut(s) 267, 311, 964
BstMBI GATC 3 cut(s) 711, 1008, 1135
BstMWI GCNNNNNNNGC 4 cut(s) 598, 880, 883, 1059
BstNI CCWGG 2 cut(s) 296, 1019
BstNSI RCATGY 1 cut(s) 209
BstSCI CCNGG 6 cut(s) 200, 252, 294, 429, 877, 1017
BstSLI GKGCMC 1 cut(s) 473
BstUI CGCG 1 cut(s) 893
BstV1I GCAGC 2 cut(s) 861, 1018
BstV2I GAAGAC 1 cut(s) 174
BstXI CCANNNNNNTGG 1 cut(s) 665
BsuRI GGCC 3 cut(s) 257, 695, 863
BtgI CCRYGG 3 cut(s) 258, 664, 1048
BtgZI GCGATG 1 cut(s) 253
BtsCI GGATG 2 cut(s) 166, 711
BtsI GCAGTG 1 cut(s) 1178
BtsIMutI CAGTG 3 cut(s) 917, 1011, 1178
Cac8I GCNNGC 3 cut(s) 207, 510, 1029
CciI TCATGA 1 cut(s) 67
CfoI GCGC 2 cut(s) 115, 736
Cfr13I GGNCC 3 cut(s) 61, 197, 298
CseI GACGC 1 cut(s) 449
Csp6I GTAC 2 cut(s) 417, 481
CviAII CATG 9 cut(s) 68, 143, 206, 259, 268, 361, 665, 763, 1049
CviQI GTAC 2 cut(s) 417, 481
DdeI CTNAG 2 cut(s) 513, 569
DpnI GATC 3 cut(s) 713, 1010, 1137
DpnII GATC 3 cut(s) 711, 1008, 1135
DraIII CACNNNGTG 2 cut(s) 433, 468
EaeI YGGCCR 2 cut(s) 255, 693
Eam1104I CTCTTC 1 cut(s) 178
EarI CTCTTC 1 cut(s) 178
Eco130I CCWWGG 4 cut(s) 258, 664, 696, 1048
Eco147I AGGCCT 1 cut(s) 863
Eco24I GRGCYC 1 cut(s) 772
Eco31I GGTCTC 2 cut(s) 267, 311
Eco47I GGWCC 3 cut(s) 61, 197, 298
Eco57I CTGAAG 1 cut(s) 299
EcoO109I RGGNCCY 2 cut(s) 61, 298
EcoRII CCWGG 2 cut(s) 294, 1017
EcoT14I CCWWGG 4 cut(s) 258, 664, 696, 1048
EcoT38I GRGCYC 1 cut(s) 772
ErhI CCWWGG 4 cut(s) 258, 664, 696, 1048
FaeI CATG 9 cut(s) 71, 146, 209, 262, 271, 364, 668, 766, 1052
FaqI GGGAC 3 cut(s) 284, 416, 869
FatI CATG 9 cut(s) 67, 142, 205, 258, 267, 360, 664, 762, 1048
FauI CCCGC 1 cut(s) 224
Fnu4HI GCNGC 5 cut(s) 506, 875, 884, 894, 1032
FokI GGATG 2 cut(s) 153, 718
FriOI GRGCYC 1 cut(s) 772
Fsp4HI GCNGC 5 cut(s) 506, 875, 884, 894, 1032
GlaI GCGC 2 cut(s) 114, 735
GluI GCNGC 5 cut(s) 506, 875, 884, 894, 1032
GsuI CTGGAG 1 cut(s) 218
HaeII RGCGCY 1 cut(s) 737
HaeIII GGCC 3 cut(s) 257, 695, 863
HapII CCGG 8 cut(s) 195, 202, 254, 414, 431, 497, 621, 878
HgaI GACGC 1 cut(s) 449
HhaI GCGC 2 cut(s) 115, 736
Hin1I GRCGYC 1 cut(s) 441
Hin1II CATG 9 cut(s) 71, 146, 209, 262, 271, 364, 668, 766, 1052
Hin6I GCGC 2 cut(s) 113, 734
HinP1I GCGC 2 cut(s) 113, 734
HincII GTYRAC 2 cut(s) 439, 988
HindII GTYRAC 2 cut(s) 439, 988
HindIII AAGCTT 1 cut(s) 1148
HinfI GANTC 6 cut(s) 624, 634, 717, 809, 1154, 1198
HpaII CCGG 8 cut(s) 195, 202, 254, 414, 431, 497, 621, 878
HphI GGTGA 2 cut(s) 632, 760
Hpy166II GTNNAC 4 cut(s) 439, 471, 988, 1081
Hpy188I TCNGA 5 cut(s) 316, 338, 676, 716, 1069
Hpy188III TCNNGA 4 cut(s) 68, 195, 497, 616
Hpy8I GTNNAC 4 cut(s) 439, 471, 988, 1081
HpyAV CCTTC 1 cut(s) 874
HpyCH4III ACNGT 3 cut(s) 312, 844, 1015
HpyCH4V TGCA 6 cut(s) 243, 471, 601, 756, 1000, 1126
HpyF10VI GCNNNNNNNGC 4 cut(s) 598, 880, 883, 1059
HpyF3I CTNAG 2 cut(s) 513, 569
Hsp92I GRCGYC 1 cut(s) 441
Hsp92II CATG 9 cut(s) 71, 146, 209, 262, 271, 364, 668, 766, 1052
HspAI GCGC 2 cut(s) 113, 734
Kpn2I TCCGGA 2 cut(s) 194, 496
Kzo9I GATC 3 cut(s) 711, 1008, 1135
LmnI GCTCC 2 cut(s) 329, 499
Lsp1109I GCAGC 2 cut(s) 861, 1018
LweI GCATC 1 cut(s) 230
MaeIII GTNAC 3 cut(s) 351, 460, 835
MalI GATC 3 cut(s) 713, 1010, 1137
MboI GATC 3 cut(s) 711, 1008, 1135
MboII GAAGA 4 cut(s) 165, 174, 183, 1183
MfeI CAATTG 1 cut(s) 108
MhlI GDGCHC 2 cut(s) 473, 772
MlsI TGGCCA 1 cut(s) 695
MluCI AATT 3 cut(s) 108, 583, 981
MluNI TGGCCA 1 cut(s) 695
MlyI GAGTC 2 cut(s) 643, 711
MmeI TCCRAC 1 cut(s) 1173
Mox20I TGGCCA 1 cut(s) 695
MroI TCCGGA 2 cut(s) 194, 496
MroXI GAANNNNTTC 2 cut(s) 15, 1202
MscI TGGCCA 1 cut(s) 695
MslI CAYNNNNRTG 3 cut(s) 141, 663, 761
Msp20I TGGCCA 1 cut(s) 695
MspA1I CMGCKG 1 cut(s) 508
MspI CCGG 8 cut(s) 195, 202, 254, 414, 431, 497, 621, 878
MspR9I CCNGG 6 cut(s) 202, 254, 296, 431, 879, 1019
MunI CAATTG 1 cut(s) 108
MvaI CCWGG 2 cut(s) 296, 1019
MvnI CGCG 1 cut(s) 893
MwoI GCNNNNNNNGC 4 cut(s) 598, 880, 883, 1059
NciI CCSGG 4 cut(s) 202, 254, 431, 879
NcoI CCATGG 3 cut(s) 258, 664, 1048
NdeII GATC 3 cut(s) 711, 1008, 1135
NlaIII CATG 9 cut(s) 71, 146, 209, 262, 271, 364, 668, 766, 1052
NlaIV GGNNCC 3 cut(s) 63, 199, 300
NmuCI GTSAC 1 cut(s) 460
NspI RCATGY 1 cut(s) 209
PaeI GCATGC 1 cut(s) 209
PagI TCATGA 1 cut(s) 67
PceI AGGCCT 1 cut(s) 863
PdmI GAANNNNTTC 2 cut(s) 15, 1202
PfeI GAWTC 4 cut(s) 624, 809, 1154, 1198
PflMI CCANNNNNTGG 1 cut(s) 433
PfoI TCCNGGA 1 cut(s) 1017
PkrI GCNGC 5 cut(s) 507, 876, 885, 895, 1033
PleI GAGTC 2 cut(s) 642, 711
PpsI GAGTC 2 cut(s) 642, 711
PpuMI RGGWCCY 2 cut(s) 61, 298
Psp5II RGGWCCY 2 cut(s) 61, 298
Psp6I CCWGG 2 cut(s) 294, 1017
PspGI CCWGG 2 cut(s) 294, 1017
PspN4I GGNNCC 3 cut(s) 63, 199, 300
PspPI GGNCC 3 cut(s) 61, 197, 298
PspPPI RGGWCCY 2 cut(s) 61, 298
RsaI GTAC 2 cut(s) 418, 482
RsaNI GTAC 2 cut(s) 417, 481
RseI CAYNNNNRTG 3 cut(s) 141, 663, 761
SatI GCNGC 5 cut(s) 506, 875, 884, 894, 1032
Sau3AI GATC 3 cut(s) 711, 1008, 1135
Sau96I GGNCC 3 cut(s) 61, 197, 298
SchI GAGTC 2 cut(s) 643, 711
ScrFI CCNGG 6 cut(s) 202, 254, 296, 431, 879, 1019
SduI GDGCHC 2 cut(s) 473, 772
SetI ASST 9 cut(s) 16, 279, 300, 326, 346, 519, 726, 1089, 1152
SfaNI GCATC 1 cut(s) 230
SinI GGWCC 3 cut(s) 61, 197, 298
SmiMI CAYNNNNRTG 3 cut(s) 141, 663, 761
SmlI CTYRAG 1 cut(s) 719
SmoI CTYRAG 1 cut(s) 719
SphI GCATGC 1 cut(s) 209
Sse9I AATT 3 cut(s) 108, 583, 981
SseBI AGGCCT 1 cut(s) 863
SsiI CCGC 8 cut(s) 217, 249, 291, 506, 883, 893, 896, 923
StuI AGGCCT 1 cut(s) 863
StyD4I CCNGG 6 cut(s) 200, 252, 294, 429, 877, 1017
StyI CCWWGG 4 cut(s) 258, 664, 696, 1048
TaaI ACNGT 3 cut(s) 312, 844, 1015
TaqI TCGA 1 cut(s) 914
TasI AATT 3 cut(s) 108, 583, 981
TauI GCSGC 3 cut(s) 508, 886, 896
TfiI GAWTC 4 cut(s) 624, 809, 1154, 1198
TscAI CASTG 3 cut(s) 924, 1018, 1185
TseFI GTSAC 1 cut(s) 460
TseI GCWGC 2 cut(s) 874, 1031
Tsp45I GTSAC 1 cut(s) 460
TspDTI ATGAA 4 cut(s) 24, 162, 165, 1045
TspGWI ACGGA 1 cut(s) 434
TspRI CASTG 3 cut(s) 924, 1018, 1185
Van91I CCANNNNNTGG 1 cut(s) 433
VneI GTGCAC 1 cut(s) 469
VpaK11BI GGWCC 3 cut(s) 61, 197, 298
XceI RCATGY 1 cut(s) 209
XcmI CCANNNNNNNNNTGG 1 cut(s) 662
XmnI GAANNNNTTC 2 cut(s) 15, 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.