Rmu_sc0001648.1_g000008

Helicase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001648.1
OG0000080
Physical Location & Seq
Forward (+)
68941 .. 70245
1305 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001648.1_g000008.1.cds

Sequence Viewer

Length: 1305 bp
atgccaaggtgtattgaagacgaactttccatacatatctctcaagaagacattgatataattgaccaccttaatgatgaccaaatgatcgcctttaacacgatcatggctgcagttcagagaaaaacaagtgcattattttttgttgatggtcctggtggaactgggaaaacatatttataccgtgcattgctagtaaacatacgaagaacgaatcatatagtcttagccacagcatcatctggaatagctgcaaatatactacccggcaggaggatagctcactctagatttaagattccactcaatgtagatgcgtcatctatgtgttccataattaaacagtctgctttggcacaactgatacaagattcaactgcaattatttgggatgaggcacctatgacacatcgacatgtctttgaagcacttgatcgaacttttagagacataatggatgtcgacttaccatttggtggaaagataatgatttttgggggagattttcgtcaagtcatccctgttattcctaaaggaacgaagtctgaactcattcaagcctccattgtgaaatcaacattttggacgcagataaagatattaagactgagacagaatatgagatccataaatgaccaccaatttgcagagtttcttcttcgtgtaggcgatgggagtgaacaagtcatcaatgacgaaatgataagattaccggaatgcatggtggttccatgggaaagcgaccaatctatcaatctaattattgatgaagttttccccaatttgggtgatcatgtaaatgatgcaagatacatggtggatagagcattgattactcctataaacaacgatgtggacgtgttgaatgaaaacataatcaatatgtttccaggtgaagaaattacattgtattcatttgactctgttgaagatgacatcagaaatttgtaccaaccagagtttctgaactcaataaccgcagatgggttgccaccccacaagttaactctaaaagtaggtgctccaatcatgcttttgaggaatattgaccctaaattgggattgtgtaacggtactagattgttgtgcggtggttcataccaaaatctgattgatgctgagatactaataggacaatttgctgggactagagttttactacttagaattcctttgaaaagtgcagaaaatgttgggctcccatttcaactaacaagaaagcaatttccagttaaactgagcttctgtttgaccaaaaacaaatctcaagatgtgatgccccggaaattcataattattttctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

434

Amino Acids

48.87

Weight (kDa)

5.77

Isoelectric Point (pI)

43.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 397
AccB7I CCANNNNNTGG 1 cut(s) 476
AccI GTMKAC 1 cut(s) 462
AciI CCGC 2 cut(s) 978, 1089
AclWI GGATC 1 cut(s) 618
AcsI RAATTY 3 cut(s) 943, 1167, 1286
AfaI GTAC 2 cut(s) 950, 1075
AfiI CCNNNNNNNGG 7 cut(s) 273, 476, 784, 785, 984, 1057, 1058
AflIII ACRYGT 2 cut(s) 415, 858
AgsI TTSAA 8 cut(s) 17, 375, 425, 557, 865, 929, 1177, 1208
AjiI CACGTC 1 cut(s) 859
AjnI CCWGG 2 cut(s) 154, 889
AjuI GAANNNNNNNTTGG 2 cut(s) 945, 977
AluBI AGCT 3 cut(s) 251, 281, 1242
AluI AGCT 3 cut(s) 251, 281, 1242
Alw21I GWGCWC 1 cut(s) 1024
Alw26I GTCTC 2 cut(s) 441, 604
AlwI GGATC 1 cut(s) 618
ApeKI GCWGC 2 cut(s) 110, 251
ApoI RAATTY 3 cut(s) 943, 1167, 1286
ArsI GACNNNNNNTTYG 4 cut(s) 455, 487, 626, 658
Asp700I GAANNNNTTC 1 cut(s) 552
AspS9I GGNCC 1 cut(s) 152
AsuC2I CCSGG 2 cut(s) 267, 1282
AsuHPI GGTGA 2 cut(s) 800, 905
AvaII GGWCC 1 cut(s) 152
BanI GGYRCC 1 cut(s) 397
BanII GRGCYC 1 cut(s) 1200
BbsI GAAGAC 2 cut(s) 24, 54
Bbv12I GWGCWC 1 cut(s) 1024
BbvI GCAGC 2 cut(s) 97, 238
BccI CCATC 3 cut(s) 143, 665, 977
BciT130I CCWGG 2 cut(s) 156, 891
BclI TGATCA 1 cut(s) 790
BcnI CCSGG 2 cut(s) 267, 1282
BcoDI GTCTC 2 cut(s) 441, 604
BfaI CTAG 4 cut(s) 194, 288, 1077, 1149
BfmI CTRYAG 1 cut(s) 111
BisI GCNGC 2 cut(s) 111, 252
BlsI GCNGC 2 cut(s) 112, 253
Bme1390I CCNGG 4 cut(s) 156, 267, 891, 1282
Bme18I GGWCC 1 cut(s) 152
BmgBI CACGTC 1 cut(s) 859
BmgT120I GGNCC 1 cut(s) 152
BmiI GGNNCC 3 cut(s) 399, 729, 1199
BmrFI CCNGG 4 cut(s) 156, 267, 891, 1282
BmrI ACTGGG 1 cut(s) 174
BmsI GCATC 5 cut(s) 245, 304, 793, 1105, 1266
BmuI ACTGGG 1 cut(s) 174
BpiI GAAGAC 2 cut(s) 24, 54
BplI GAGNNNNNCTC 2 cut(s) 265, 297
BpuEI CTTGAG 2 cut(s) 27, 1251
BpuMI CCSGG 2 cut(s) 267, 1282
BsaJI CCNNGG 3 cut(s) 5, 731, 1280
BsaWI WCCGGW 1 cut(s) 712
Bsc4I CCNNNNNNNGG 7 cut(s) 273, 476, 784, 785, 984, 1057, 1058
Bse1I ACTGG 2 cut(s) 169, 1229
Bse3DI GCAATG 1 cut(s) 188
BseBI CCWGG 2 cut(s) 156, 891
BseDI CCNNGG 3 cut(s) 5, 731, 1280
BseGI GGATG 3 cut(s) 397, 463, 516
BseLI CCNNNNNNNGG 7 cut(s) 273, 476, 784, 785, 984, 1057, 1058
BseMI GCAATG 1 cut(s) 188
BseMII CTCAG 3 cut(s) 599, 1110, 1229
BseNI ACTGG 2 cut(s) 169, 1229
BseXI GCAGC 2 cut(s) 97, 238
BseYI CCCAGC 1 cut(s) 1142
BsgI GTGCAG 1 cut(s) 1203
BshNI GGYRCC 1 cut(s) 397
BsiHKAI GWGCWC 1 cut(s) 1024
BsiSI CCGG 3 cut(s) 267, 713, 1282
BslFI GGGAC 1 cut(s) 1159
BslI CCNNNNNNNGG 7 cut(s) 273, 476, 784, 785, 984, 1057, 1058
BsmAI GTCTC 2 cut(s) 441, 604
BsmFI GGGAC 1 cut(s) 1159
BsmI GAATGC 1 cut(s) 722
Bsp1286I GDGCHC 2 cut(s) 1024, 1200
Bsp143I GATC 5 cut(s) 87, 102, 433, 623, 790
Bsp19I CCATGG 1 cut(s) 731
BspACI CCGC 2 cut(s) 978, 1089
BspCNI CTCAG 3 cut(s) 600, 1111, 1230
BspLI GGNNCC 3 cut(s) 399, 729, 1199
BspMAI CTGCAG 1 cut(s) 115
BspPI GGATC 1 cut(s) 618
BspT107I GGYRCC 1 cut(s) 397
BsrDI GCAATG 1 cut(s) 188
BsrI ACTGG 2 cut(s) 169, 1229
BssECI CCNNGG 3 cut(s) 5, 731, 1280
BssMI GATC 5 cut(s) 87, 102, 433, 623, 790
BssT1I CCWWGG 2 cut(s) 5, 731
Bst2UI CCWGG 2 cut(s) 156, 891
Bst4CI ACNGT 3 cut(s) 185, 345, 1073
BstDEI CTNAG 5 cut(s) 226, 608, 1119, 1163, 1238
BstDSI CCRYGG 1 cut(s) 731
BstF5I GGATG 3 cut(s) 397, 463, 516
BstKTI GATC 5 cut(s) 90, 105, 436, 626, 793
BstMAI GTCTC 2 cut(s) 441, 604
BstMBI GATC 5 cut(s) 87, 102, 433, 623, 790
BstNI CCWGG 2 cut(s) 156, 891
BstNSI RCATGY 1 cut(s) 419
BstSCI CCNGG 4 cut(s) 154, 265, 889, 1280
BstSFI CTRYAG 1 cut(s) 111
BstV1I GCAGC 2 cut(s) 97, 238
BstV2I GAAGAC 2 cut(s) 24, 54
BstX2I RGATCY 1 cut(s) 623
BstYI RGATCY 1 cut(s) 623
BtgI CCRYGG 1 cut(s) 731
BtgZI GCGATG 1 cut(s) 684
BtrI CACGTC 1 cut(s) 859
BtsCI GGATG 3 cut(s) 397, 463, 516
Cfr13I GGNCC 1 cut(s) 152
CseI GACGC 2 cut(s) 306, 595
Csp6I GTAC 2 cut(s) 949, 1074
CviAII CATG 7 cut(s) 106, 416, 721, 732, 794, 814, 1030
CviJI RGCY 7 cut(s) 110, 230, 251, 281, 560, 1198, 1242
CviKI_1 RGCY 7 cut(s) 110, 230, 251, 281, 560, 1198, 1242
CviQI GTAC 2 cut(s) 949, 1074
DdeI CTNAG 5 cut(s) 226, 608, 1119, 1163, 1238
DpnI GATC 5 cut(s) 89, 104, 435, 625, 792
DpnII GATC 5 cut(s) 87, 102, 433, 623, 790
Eco130I CCWWGG 2 cut(s) 5, 731
Eco24I GRGCYC 1 cut(s) 1200
Eco47I GGWCC 1 cut(s) 152
EcoRI GAATTC 1 cut(s) 1167
EcoRII CCWGG 2 cut(s) 154, 889
EcoT14I CCWWGG 2 cut(s) 5, 731
EcoT22I ATGCAT 1 cut(s) 722
EcoT38I GRGCYC 1 cut(s) 1200
ErhI CCWWGG 2 cut(s) 5, 731
FaeI CATG 7 cut(s) 109, 419, 724, 735, 797, 817, 1033
FalI AAGNNNNNCTT 2 cut(s) 9, 41
FaqI GGGAC 1 cut(s) 1159
FatI CATG 7 cut(s) 105, 415, 720, 731, 793, 813, 1029
FbaI TGATCA 1 cut(s) 790
FblI GTMKAC 1 cut(s) 462
Fnu4HI GCNGC 2 cut(s) 111, 252
FokI GGATG 3 cut(s) 404, 470, 503
FriOI GRGCYC 1 cut(s) 1200
Fsp4HI GCNGC 2 cut(s) 111, 252
FspBI CTAG 4 cut(s) 194, 288, 1077, 1149
GluI GCNGC 2 cut(s) 111, 252
GsaI CCCAGC 1 cut(s) 1146
HapII CCGG 3 cut(s) 267, 713, 1282
HgaI GACGC 2 cut(s) 306, 595
Hin1II CATG 7 cut(s) 109, 419, 724, 735, 797, 817, 1033
HincII GTYRAC 2 cut(s) 463, 1005
HindII GTYRAC 2 cut(s) 463, 1005
HinfI GANTC 4 cut(s) 214, 298, 371, 920
HpaI GTTAAC 1 cut(s) 1005
HpaII CCGG 3 cut(s) 267, 713, 1282
HphI GGTGA 2 cut(s) 800, 905
Hpy166II GTNNAC 5 cut(s) 199, 463, 680, 856, 1005
Hpy188I TCNGA 6 cut(s) 120, 547, 941, 966, 1110, 1304
Hpy188III TCNNGA 4 cut(s) 44, 243, 288, 1268
Hpy8I GTNNAC 5 cut(s) 199, 463, 680, 856, 1005
HpyCH4III ACNGT 3 cut(s) 185, 345, 1073
HpyCH4IV ACGT 1 cut(s) 858
HpyCH4V TGCA 9 cut(s) 113, 134, 188, 254, 380, 647, 720, 806, 1184
HpyF3I CTNAG 5 cut(s) 226, 608, 1119, 1163, 1238
HpySE526I ACGT 1 cut(s) 858
Hsp92II CATG 7 cut(s) 109, 419, 724, 735, 797, 817, 1033
Ksp22I TGATCA 1 cut(s) 790
KspAI GTTAAC 1 cut(s) 1005
Kzo9I GATC 5 cut(s) 87, 102, 433, 623, 790
LmnI GCTCC 2 cut(s) 1027, 1203
Lsp1109I GCAGC 2 cut(s) 97, 238
LweI GCATC 5 cut(s) 245, 304, 793, 1105, 1266
MaeI CTAG 4 cut(s) 194, 288, 1077, 1149
MaeII ACGT 1 cut(s) 858
MaeIII GTNAC 1 cut(s) 1067
MalI GATC 5 cut(s) 89, 104, 435, 625, 792
MboI GATC 5 cut(s) 87, 102, 433, 623, 790
MboII GAAGA 7 cut(s) 29, 59, 219, 647, 650, 908, 941
MflI RGATCY 1 cut(s) 623
MhlI GDGCHC 2 cut(s) 1024, 1200
MlyI GAGTC 1 cut(s) 914
MnlI CCTC 4 cut(s) 267, 388, 571, 1032
Mph1103I ATGCAT 1 cut(s) 722
MroXI GAANNNNTTC 1 cut(s) 552
MseI TTAA 7 cut(s) 72, 96, 294, 339, 602, 1004, 1233
MslI CAYNNNNRTG 5 cut(s) 72, 104, 325, 414, 798
MspI CCGG 3 cut(s) 267, 713, 1282
MspR9I CCNGG 4 cut(s) 156, 267, 891, 1282
Mva1269I GAATGC 1 cut(s) 722
MvaI CCWGG 2 cut(s) 156, 891
NciI CCSGG 2 cut(s) 267, 1282
NcoI CCATGG 1 cut(s) 731
NdeII GATC 5 cut(s) 87, 102, 433, 623, 790
NlaIII CATG 7 cut(s) 109, 419, 724, 735, 797, 817, 1033
NlaIV GGNNCC 3 cut(s) 399, 729, 1199
NsiI ATGCAT 1 cut(s) 722
NspI RCATGY 1 cut(s) 419
PciI ACATGT 1 cut(s) 415
PcsI WCGNNNNNNNCGW 1 cut(s) 855
PctI GAATGC 1 cut(s) 722
PdmI GAANNNNTTC 1 cut(s) 552
PfeI GAWTC 3 cut(s) 214, 298, 371
PflMI CCANNNNNTGG 1 cut(s) 476
PkrI GCNGC 2 cut(s) 112, 253
PleI GAGTC 1 cut(s) 914
PpsI GAGTC 1 cut(s) 914
PscI ACATGT 1 cut(s) 415
Psp6I CCWGG 2 cut(s) 154, 889
PspFI CCCAGC 1 cut(s) 1142
PspGI CCWGG 2 cut(s) 154, 889
PspN4I GGNNCC 3 cut(s) 399, 729, 1199
PspPI GGNCC 1 cut(s) 152
PsrI GAACNNNNNNTAC 2 cut(s) 15, 47
PstI CTGCAG 1 cut(s) 115
PsuI RGATCY 1 cut(s) 623
RsaI GTAC 2 cut(s) 950, 1075
RsaNI GTAC 2 cut(s) 949, 1074
RseI CAYNNNNRTG 5 cut(s) 72, 104, 325, 414, 798
SalI GTCGAC 1 cut(s) 461
SaqAI TTAA 7 cut(s) 72, 96, 294, 339, 602, 1004, 1233
SatI GCNGC 2 cut(s) 111, 252
Sau3AI GATC 5 cut(s) 87, 102, 433, 623, 790
Sau96I GGNCC 1 cut(s) 152
SchI GAGTC 1 cut(s) 914
ScrFI CCNGG 4 cut(s) 156, 267, 891, 1282
SduI GDGCHC 2 cut(s) 1024, 1200
SetI ASST 9 cut(s) 11, 72, 253, 283, 403, 861, 895, 1021, 1244
SfaNI GCATC 5 cut(s) 245, 304, 793, 1105, 1266
SfcI CTRYAG 1 cut(s) 111
SinI GGWCC 1 cut(s) 152
SmiMI CAYNNNNRTG 5 cut(s) 72, 104, 325, 414, 798
SmlI CTYRAG 2 cut(s) 42, 1266
SmoI CTYRAG 2 cut(s) 42, 1266
SsiI CCGC 2 cut(s) 978, 1089
SspI AATATT 1 cut(s) 1045
SspMI CTAG 4 cut(s) 194, 288, 1077, 1149
StyD4I CCNGG 4 cut(s) 154, 265, 889, 1280
StyI CCWWGG 2 cut(s) 5, 731
TaaI ACNGT 3 cut(s) 185, 345, 1073
TaiI ACGT 1 cut(s) 861
TaqI TCGA 3 cut(s) 412, 436, 462
TfiI GAWTC 3 cut(s) 214, 298, 371
Tru1I TTAA 7 cut(s) 72, 96, 294, 339, 602, 1004, 1233
Tru9I TTAA 7 cut(s) 72, 96, 294, 339, 602, 1004, 1233
TseI GCWGC 2 cut(s) 110, 251
TspDTI ATGAA 5 cut(s) 783, 882, 903, 1086, 1279
Van91I CCANNNNNTGG 1 cut(s) 476
VpaK11BI GGWCC 1 cut(s) 152
XapI RAATTY 3 cut(s) 943, 1167, 1286
XbaI TCTAGA 1 cut(s) 287
XceI RCATGY 1 cut(s) 419
XmiI GTMKAC 1 cut(s) 462
XmnI GAANNNNTTC 1 cut(s) 552
XspI CTAG 4 cut(s) 194, 288, 1077, 1149
Zsp2I ATGCAT 1 cut(s) 722
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.