Belongs to the helicase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Helitron_like_N | PF14214 | 2 - 42 | 4.9e-10 | Helitron helicase-like domain at N-terminus |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 188, 261 |
| AcoI | YGGCCR | 2 cut(s) | 919, 961 |
| AcsI | RAATTY | 9 cut(s) | 89, 311, 395, 454, 561, 808, 848, 860, 976 |
| AfaI | GTAC | 3 cut(s) | 417, 772, 936 |
| AflIII | ACRYGT | 1 cut(s) | 931 |
| AluBI | AGCT | 1 cut(s) | 557 |
| AluI | AGCT | 1 cut(s) | 557 |
| Alw21I | GWGCWC | 1 cut(s) | 559 |
| Alw26I | GTCTC | 1 cut(s) | 637 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 164 |
| AoxI | GGCC | 3 cut(s) | 544, 919, 961 |
| ApaI | GGGCCC | 1 cut(s) | 548 |
| ApoI | RAATTY | 9 cut(s) | 89, 311, 395, 454, 561, 808, 848, 860, 976 |
| AseI | ATTAAT | 3 cut(s) | 30, 483, 537 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 304 |
| AspS9I | GGNCC | 3 cut(s) | 254, 544, 545 |
| AsuII | TTCGAA | 1 cut(s) | 308 |
| AvaII | GGWCC | 1 cut(s) | 254 |
| BaeGI | GKGCMC | 1 cut(s) | 548 |
| BalI | TGGCCA | 1 cut(s) | 963 |
| BanII | GRGCYC | 2 cut(s) | 548, 559 |
| Bbv12I | GWGCWC | 1 cut(s) | 559 |
| BccI | CCATC | 2 cut(s) | 862, 972 |
| BclI | TGATCA | 1 cut(s) | 385 |
| BcoDI | GTCTC | 1 cut(s) | 637 |
| Bme18I | GGWCC | 1 cut(s) | 254 |
| BmgT120I | GGNCC | 3 cut(s) | 254, 544, 545 |
| BmiI | GGNNCC | 1 cut(s) | 546 |
| BmsI | GCATC | 1 cut(s) | 836 |
| BpmI | CTGGAG | 1 cut(s) | 66 |
| Bpu14I | TTCGAA | 1 cut(s) | 308 |
| BsaJI | CCNNGG | 1 cut(s) | 896 |
| Bse1I | ACTGG | 1 cut(s) | 796 |
| BseDI | CCNNGG | 1 cut(s) | 896 |
| BseGI | GGATG | 1 cut(s) | 673 |
| BseMII | CTCAG | 1 cut(s) | 834 |
| BseNI | ACTGG | 1 cut(s) | 796 |
| BseRI | GAGGAG | 1 cut(s) | 615 |
| BseSI | GKGCMC | 1 cut(s) | 548 |
| BshFI | GGCC | 3 cut(s) | 546, 921, 963 |
| BsiHKAI | GWGCWC | 1 cut(s) | 559 |
| BslFI | GGGAC | 1 cut(s) | 884 |
| BsmAI | GTCTC | 1 cut(s) | 637 |
| BsmFI | GGGAC | 1 cut(s) | 884 |
| BsnI | GGCC | 3 cut(s) | 546, 921, 963 |
| Bsp119I | TTCGAA | 1 cut(s) | 308 |
| Bsp120I | GGGCCC | 1 cut(s) | 544 |
| Bsp1286I | GDGCHC | 2 cut(s) | 548, 559 |
| Bsp1407I | TGTACA | 1 cut(s) | 415 |
| Bsp143I | GATC | 2 cut(s) | 385, 550 |
| BspACI | CCGC | 2 cut(s) | 188, 261 |
| BspANI | GGCC | 3 cut(s) | 546, 921, 963 |
| BspCNI | CTCAG | 1 cut(s) | 833 |
| BspHI | TCATGA | 1 cut(s) | 628 |
| BspLI | GGNNCC | 1 cut(s) | 546 |
| BspT104I | TTCGAA | 1 cut(s) | 308 |
| BsrGI | TGTACA | 1 cut(s) | 415 |
| BsrI | ACTGG | 1 cut(s) | 796 |
| BssECI | CCNNGG | 1 cut(s) | 896 |
| BssMI | GATC | 2 cut(s) | 385, 550 |
| Bst4CI | ACNGT | 1 cut(s) | 570 |
| BstAUI | TGTACA | 1 cut(s) | 415 |
| BstBI | TTCGAA | 1 cut(s) | 308 |
| BstDEI | CTNAG | 2 cut(s) | 464, 820 |
| BstDSI | CCRYGG | 1 cut(s) | 896 |
| BstF5I | GGATG | 1 cut(s) | 673 |
| BstKTI | GATC | 2 cut(s) | 388, 553 |
| BstMAI | GTCTC | 1 cut(s) | 637 |
| BstMBI | GATC | 2 cut(s) | 385, 550 |
| BstNSI | RCATGY | 2 cut(s) | 361, 935 |
| BstSLI | GKGCMC | 1 cut(s) | 548 |
| BsuRI | GGCC | 3 cut(s) | 546, 921, 963 |
| BtgI | CCRYGG | 1 cut(s) | 896 |
| BtsCI | GGATG | 1 cut(s) | 673 |
| CaiI | CAGNNNCTG | 1 cut(s) | 164 |
| CciI | TCATGA | 1 cut(s) | 628 |
| Cfr13I | GGNCC | 3 cut(s) | 254, 544, 545 |
| Csp6I | GTAC | 3 cut(s) | 416, 771, 935 |
| CviAII | CATG | 8 cut(s) | 25, 113, 251, 289, 358, 495, 629, 932 |
| CviJI | RGCY | 4 cut(s) | 546, 557, 921, 963 |
| CviKI_1 | RGCY | 4 cut(s) | 546, 557, 921, 963 |
| CviQI | GTAC | 3 cut(s) | 416, 771, 935 |
| DdeI | CTNAG | 2 cut(s) | 464, 820 |
| DpnI | GATC | 2 cut(s) | 387, 552 |
| DpnII | GATC | 2 cut(s) | 385, 550 |
| DraI | TTTAAA | 3 cut(s) | 529, 802, 972 |
| EaeI | YGGCCR | 2 cut(s) | 919, 961 |
| Ecl136II | GAGCTC | 1 cut(s) | 557 |
| Eco24I | GRGCYC | 2 cut(s) | 548, 559 |
| Eco47I | GGWCC | 1 cut(s) | 254 |
| Eco53kI | GAGCTC | 1 cut(s) | 557 |
| EcoICRI | GAGCTC | 1 cut(s) | 557 |
| EcoO109I | RGGNCCY | 1 cut(s) | 544 |
| EcoT38I | GRGCYC | 2 cut(s) | 548, 559 |
| FaeI | CATG | 8 cut(s) | 28, 116, 254, 292, 361, 498, 632, 935 |
| FaqI | GGGAC | 1 cut(s) | 884 |
| FatI | CATG | 8 cut(s) | 24, 112, 250, 288, 357, 494, 628, 931 |
| FauNDI | CATATG | 1 cut(s) | 120 |
| FbaI | TGATCA | 1 cut(s) | 385 |
| FokI | GGATG | 1 cut(s) | 660 |
| FriOI | GRGCYC | 2 cut(s) | 548, 559 |
| GsuI | CTGGAG | 1 cut(s) | 66 |
| HaeIII | GGCC | 3 cut(s) | 546, 921, 963 |
| Hin1II | CATG | 8 cut(s) | 28, 116, 254, 292, 361, 498, 632, 935 |
| HinfI | GANTC | 5 cut(s) | 173, 247, 491, 632, 749 |
| Hpy166II | GTNNAC | 1 cut(s) | 79 |
| Hpy188I | TCNGA | 2 cut(s) | 832, 912 |
| Hpy188III | TCNNGA | 7 cut(s) | 45, 215, 380, 629, 669, 746, 822 |
| Hpy8I | GTNNAC | 1 cut(s) | 79 |
| Hpy99I | CGWCG | 1 cut(s) | 381 |
| HpyAV | CCTTC | 1 cut(s) | 372 |
| HpyCH4III | ACNGT | 1 cut(s) | 570 |
| HpyCH4IV | ACGT | 1 cut(s) | 376 |
| HpyCH4V | TGCA | 3 cut(s) | 227, 288, 685 |
| HpyF3I | CTNAG | 2 cut(s) | 464, 820 |
| HpySE526I | ACGT | 1 cut(s) | 376 |
| Hsp92II | CATG | 8 cut(s) | 28, 116, 254, 292, 361, 498, 632, 935 |
| Ksp22I | TGATCA | 1 cut(s) | 385 |
| Kzo9I | GATC | 2 cut(s) | 385, 550 |
| LmnI | GCTCC | 1 cut(s) | 824 |
| LpnPI | CCDG | 7 cut(s) | 30, 210, 228, 561, 690, 777, 807 |
| LweI | GCATC | 1 cut(s) | 836 |
| MaeII | ACGT | 1 cut(s) | 376 |
| MalI | GATC | 2 cut(s) | 387, 552 |
| MboI | GATC | 2 cut(s) | 385, 550 |
| MboII | GAAGA | 1 cut(s) | 788 |
| MfeI | CAATTG | 1 cut(s) | 228 |
| MhlI | GDGCHC | 2 cut(s) | 548, 559 |
| MlsI | TGGCCA | 1 cut(s) | 963 |
| MluNI | TGGCCA | 1 cut(s) | 963 |
| MlyI | GAGTC | 1 cut(s) | 500 |
| MmeI | TCCRAC | 1 cut(s) | 869 |
| MnlI | CCTC | 5 cut(s) | 61, 95, 120, 636, 948 |
| Mox20I | TGGCCA | 1 cut(s) | 963 |
| MroXI | GAANNNNTTC | 1 cut(s) | 304 |
| MscI | TGGCCA | 1 cut(s) | 963 |
| MslI | CAYNNNNRTG | 1 cut(s) | 483 |
| Msp20I | TGGCCA | 1 cut(s) | 963 |
| MspA1I | CMGCKG | 1 cut(s) | 188 |
| MunI | CAATTG | 1 cut(s) | 228 |
| NdeI | CATATG | 1 cut(s) | 120 |
| NdeII | GATC | 2 cut(s) | 385, 550 |
| NlaIII | CATG | 8 cut(s) | 28, 116, 254, 292, 361, 498, 632, 935 |
| NlaIV | GGNNCC | 1 cut(s) | 546 |
| NspI | RCATGY | 2 cut(s) | 361, 935 |
| NspV | TTCGAA | 1 cut(s) | 308 |
| PacI | TTAATTAA | 1 cut(s) | 516 |
| PagI | TCATGA | 1 cut(s) | 628 |
| PciI | ACATGT | 1 cut(s) | 931 |
| PdmI | GAANNNNTTC | 1 cut(s) | 304 |
| PfeI | GAWTC | 4 cut(s) | 173, 247, 632, 749 |
| PleI | GAGTC | 1 cut(s) | 499 |
| PpsI | GAGTC | 1 cut(s) | 499 |
| PscI | ACATGT | 1 cut(s) | 931 |
| PshBI | ATTAAT | 3 cut(s) | 30, 483, 537 |
| Psp124BI | GAGCTC | 1 cut(s) | 559 |
| PspN4I | GGNNCC | 1 cut(s) | 546 |
| PspOMI | GGGCCC | 1 cut(s) | 544 |
| PspPI | GGNCC | 3 cut(s) | 254, 544, 545 |
| PstNI | CAGNNNCTG | 1 cut(s) | 164 |
| RsaI | GTAC | 3 cut(s) | 417, 772, 936 |
| RsaNI | GTAC | 3 cut(s) | 416, 771, 935 |
| RseI | CAYNNNNRTG | 1 cut(s) | 483 |
| SacI | GAGCTC | 1 cut(s) | 559 |
| Sau3AI | GATC | 2 cut(s) | 385, 550 |
| Sau96I | GGNCC | 3 cut(s) | 254, 544, 545 |
| SchI | GAGTC | 1 cut(s) | 500 |
| SduI | GDGCHC | 2 cut(s) | 548, 559 |
| SetI | ASST | 7 cut(s) | 55, 259, 298, 379, 559, 940, 959 |
| SfaNI | GCATC | 1 cut(s) | 836 |
| SfuI | TTCGAA | 1 cut(s) | 308 |
| SinI | GGWCC | 1 cut(s) | 254 |
| SmiI | ATTTAAAT | 1 cut(s) | 529 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 483 |
| SsiI | CCGC | 2 cut(s) | 188, 261 |
| SspI | AATATT | 3 cut(s) | 521, 656, 721 |
| SstI | GAGCTC | 1 cut(s) | 559 |
| SwaI | ATTTAAAT | 1 cut(s) | 529 |
| TaaI | ACNGT | 1 cut(s) | 570 |
| TaiI | ACGT | 1 cut(s) | 379 |
| TaqI | TCGA | 5 cut(s) | 308, 553, 559, 613, 670 |
| TatI | WGTACW | 2 cut(s) | 415, 770 |
| TfiI | GAWTC | 4 cut(s) | 173, 247, 632, 749 |
| TspDTI | ATGAA | 8 cut(s) | 239, 305, 588, 603, 645, 653, 689, 941 |
| TspGWI | ACGGA | 1 cut(s) | 913 |
| VpaK11BI | GGWCC | 1 cut(s) | 254 |
| VspI | ATTAAT | 3 cut(s) | 30, 483, 537 |
| XapI | RAATTY | 9 cut(s) | 89, 311, 395, 454, 561, 808, 848, 860, 976 |
| XceI | RCATGY | 2 cut(s) | 361, 935 |
| XmnI | GAANNNNTTC | 1 cut(s) | 304 |