Helitron helicase-like domain at N-terminus
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 585 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 516 |
| AccI | GTMKAC | 2 cut(s) | 675, 825 |
| AciI | CCGC | 1 cut(s) | 307 |
| AcsI | RAATTY | 3 cut(s) | 221, 466, 794 |
| AcuI | CTGAAG | 1 cut(s) | 315 |
| AfaI | GTAC | 1 cut(s) | 249 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 64 |
| AflIII | ACRYGT | 2 cut(s) | 50, 244 |
| AgsI | TTSAA | 6 cut(s) | 14, 144, 221, 370, 629, 704 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 743 |
| AjiI | CACGTC | 1 cut(s) | 51 |
| AleI | CACNNNNGTG | 1 cut(s) | 557 |
| AluBI | AGCT | 3 cut(s) | 85, 283, 776 |
| AluI | AGCT | 3 cut(s) | 85, 283, 776 |
| Alw21I | GWGCWC | 1 cut(s) | 769 |
| Alw26I | GTCTC | 2 cut(s) | 543, 875 |
| Alw44I | GTGCAC | 1 cut(s) | 765 |
| AoxI | GGCC | 1 cut(s) | 235 |
| ApaLI | GTGCAC | 1 cut(s) | 765 |
| ApoI | RAATTY | 3 cut(s) | 221, 466, 794 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 707, 739 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 894 |
| AspS9I | GGNCC | 3 cut(s) | 235, 386, 683 |
| AsuC2I | CCSGG | 1 cut(s) | 719 |
| AsuHPI | GGTGA | 1 cut(s) | 166 |
| AvaII | GGWCC | 2 cut(s) | 386, 683 |
| BaeGI | GKGCMC | 1 cut(s) | 769 |
| BbsI | GAAGAC | 4 cut(s) | 171, 405, 514, 897 |
| Bbv12I | GWGCWC | 1 cut(s) | 769 |
| BcnI | CCSGG | 1 cut(s) | 719 |
| BcoDI | GTCTC | 2 cut(s) | 543, 875 |
| BfaI | CTAG | 2 cut(s) | 93, 899 |
| BfmI | CTRYAG | 1 cut(s) | 885 |
| BglII | AGATCT | 1 cut(s) | 542 |
| Bme1390I | CCNGG | 1 cut(s) | 719 |
| Bme18I | GGWCC | 2 cut(s) | 386, 683 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 743 |
| BmgBI | CACGTC | 1 cut(s) | 51 |
| BmgT120I | GGNCC | 3 cut(s) | 235, 386, 683 |
| BmiI | GGNNCC | 2 cut(s) | 236, 397 |
| BmrFI | CCNGG | 1 cut(s) | 719 |
| BmsI | GCATC | 4 cut(s) | 425, 478, 739, 862 |
| BpiI | GAAGAC | 4 cut(s) | 171, 405, 514, 897 |
| BpmI | CTGGAG | 1 cut(s) | 567 |
| BpuEI | CTTGAG | 1 cut(s) | 170 |
| BpuMI | CCSGG | 1 cut(s) | 719 |
| BsaAI | YACGTR | 1 cut(s) | 539 |
| BsaBI | GATNNNNATC | 1 cut(s) | 492 |
| BsaJI | CCNNGG | 1 cut(s) | 590 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 64 |
| Bse1I | ACTGG | 1 cut(s) | 527 |
| Bse8I | GATNNNNATC | 1 cut(s) | 492 |
| BseDI | CCNNGG | 1 cut(s) | 590 |
| BseGI | GGATG | 1 cut(s) | 274 |
| BseJI | GATNNNNATC | 1 cut(s) | 492 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BseNI | ACTGG | 1 cut(s) | 527 |
| BseSI | GKGCMC | 1 cut(s) | 769 |
| BshFI | GGCC | 1 cut(s) | 237 |
| BsiHKAI | GWGCWC | 1 cut(s) | 769 |
| BsiSI | CCGG | 1 cut(s) | 719 |
| BslFI | GGGAC | 1 cut(s) | 515 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BsmAI | GTCTC | 2 cut(s) | 543, 875 |
| BsmFI | GGGAC | 1 cut(s) | 515 |
| BsnI | GGCC | 1 cut(s) | 237 |
| Bsp1286I | GDGCHC | 1 cut(s) | 769 |
| Bsp1407I | TGTACA | 1 cut(s) | 247 |
| Bsp143I | GATC | 3 cut(s) | 109, 358, 542 |
| BspACI | CCGC | 1 cut(s) | 307 |
| BspANI | GGCC | 1 cut(s) | 237 |
| BspLI | GGNNCC | 2 cut(s) | 236, 397 |
| BspQI | GCTCTTC | 1 cut(s) | 336 |
| BsrGI | TGTACA | 1 cut(s) | 247 |
| BsrI | ACTGG | 1 cut(s) | 527 |
| BssECI | CCNNGG | 1 cut(s) | 590 |
| BssMI | GATC | 3 cut(s) | 109, 358, 542 |
| Bst4CI | ACNGT | 6 cut(s) | 386, 411, 475, 606, 823, 886 |
| Bst6I | CTCTTC | 2 cut(s) | 187, 336 |
| BstAUI | TGTACA | 1 cut(s) | 247 |
| BstBAI | YACGTR | 1 cut(s) | 539 |
| BstC8I | GCNNGC | 1 cut(s) | 912 |
| BstDSI | CCRYGG | 1 cut(s) | 590 |
| BstF5I | GGATG | 1 cut(s) | 274 |
| BstKTI | GATC | 3 cut(s) | 112, 361, 545 |
| BstMAI | GTCTC | 2 cut(s) | 543, 875 |
| BstMBI | GATC | 3 cut(s) | 109, 358, 542 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 773 |
| BstNSI | RCATGY | 4 cut(s) | 248, 256, 856, 914 |
| BstSCI | CCNGG | 1 cut(s) | 717 |
| BstSFI | CTRYAG | 1 cut(s) | 885 |
| BstSLI | GKGCMC | 1 cut(s) | 769 |
| BstSNI | TACGTA | 1 cut(s) | 539 |
| BstV2I | GAAGAC | 4 cut(s) | 171, 405, 514, 897 |
| BstX2I | RGATCY | 1 cut(s) | 542 |
| BstYI | RGATCY | 1 cut(s) | 542 |
| BsuRI | GGCC | 1 cut(s) | 237 |
| BtgI | CCRYGG | 1 cut(s) | 590 |
| BtrI | CACGTC | 1 cut(s) | 51 |
| BtsCI | GGATG | 1 cut(s) | 274 |
| BtsIMutI | CAGTG | 1 cut(s) | 471 |
| Cac8I | GCNNGC | 1 cut(s) | 912 |
| Cfr13I | GGNCC | 3 cut(s) | 235, 386, 683 |
| Csp6I | GTAC | 1 cut(s) | 248 |
| CviAII | CATG | 8 cut(s) | 206, 245, 253, 262, 390, 417, 853, 911 |
| CviJI | RGCY | 6 cut(s) | 5, 85, 237, 283, 346, 776 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 85, 237, 283, 346, 776 |
| CviQI | GTAC | 1 cut(s) | 248 |
| DpnI | GATC | 3 cut(s) | 111, 360, 544 |
| DpnII | GATC | 3 cut(s) | 109, 358, 542 |
| DraI | TTTAAA | 1 cut(s) | 793 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 516 |
| DriI | GACNNNNNGTC | 1 cut(s) | 743 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 516 |
| Eam1104I | CTCTTC | 2 cut(s) | 187, 336 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 743 |
| EarI | CTCTTC | 2 cut(s) | 187, 336 |
| Eco105I | TACGTA | 1 cut(s) | 539 |
| Eco47I | GGWCC | 2 cut(s) | 386, 683 |
| Eco57I | CTGAAG | 1 cut(s) | 315 |
| EcoO109I | RGGNCCY | 2 cut(s) | 235, 683 |
| EcoT22I | ATGCAT | 1 cut(s) | 493 |
| FaeI | CATG | 8 cut(s) | 209, 248, 256, 265, 393, 420, 856, 914 |
| FaqI | GGGAC | 1 cut(s) | 515 |
| FatI | CATG | 8 cut(s) | 205, 244, 252, 261, 389, 416, 852, 910 |
| FauNDI | CATATG | 1 cut(s) | 375 |
| FblI | GTMKAC | 2 cut(s) | 675, 825 |
| FokI | GGATG | 1 cut(s) | 281 |
| FspBI | CTAG | 2 cut(s) | 93, 899 |
| GsuI | CTGGAG | 1 cut(s) | 567 |
| HaeIII | GGCC | 1 cut(s) | 237 |
| HapII | CCGG | 1 cut(s) | 719 |
| Hin1II | CATG | 8 cut(s) | 209, 248, 256, 265, 393, 420, 856, 914 |
| HincII | GTYRAC | 1 cut(s) | 826 |
| HindII | GTYRAC | 1 cut(s) | 826 |
| HindIII | AAGCTT | 2 cut(s) | 281, 774 |
| HinfI | GANTC | 2 cut(s) | 379, 867 |
| HpaII | CCGG | 1 cut(s) | 719 |
| HphI | GGTGA | 1 cut(s) | 166 |
| Hpy166II | GTNNAC | 4 cut(s) | 250, 676, 767, 826 |
| Hpy188I | TCNGA | 3 cut(s) | 228, 715, 866 |
| Hpy188III | TCNNGA | 3 cut(s) | 116, 546, 686 |
| Hpy8I | GTNNAC | 4 cut(s) | 250, 676, 767, 826 |
| Hpy99I | CGWCG | 1 cut(s) | 218 |
| HpyCH4III | ACNGT | 6 cut(s) | 386, 411, 475, 606, 823, 886 |
| HpyCH4IV | ACGT | 2 cut(s) | 50, 538 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 773 |
| HpySE526I | ACGT | 2 cut(s) | 50, 538 |
| Hsp92II | CATG | 8 cut(s) | 209, 248, 256, 265, 393, 420, 856, 914 |
| Kzo9I | GATC | 3 cut(s) | 109, 358, 542 |
| LguI | GCTCTTC | 1 cut(s) | 336 |
| LmnI | GCTCC | 1 cut(s) | 639 |
| LweI | GCATC | 4 cut(s) | 425, 478, 739, 862 |
| MaeI | CTAG | 2 cut(s) | 93, 899 |
| MaeII | ACGT | 2 cut(s) | 50, 538 |
| MaeIII | GTNAC | 2 cut(s) | 53, 614 |
| MalI | GATC | 3 cut(s) | 111, 360, 544 |
| MboI | GATC | 3 cut(s) | 109, 358, 542 |
| MflI | RGATCY | 1 cut(s) | 542 |
| MhlI | GDGCHC | 1 cut(s) | 769 |
| MluCI | AATT | 6 cut(s) | 61, 72, 221, 466, 740, 794 |
| MmeI | TCCRAC | 2 cut(s) | 246, 842 |
| MnlI | CCTC | 4 cut(s) | 118, 357, 543, 777 |
| Mph1103I | ATGCAT | 1 cut(s) | 493 |
| MroXI | GAANNNNTTC | 1 cut(s) | 894 |
| MseI | TTAA | 5 cut(s) | 75, 285, 401, 792, 922 |
| MslI | CAYNNNNRTG | 2 cut(s) | 557, 621 |
| MspI | CCGG | 1 cut(s) | 719 |
| MspR9I | CCNGG | 1 cut(s) | 719 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 773 |
| NciI | CCSGG | 1 cut(s) | 719 |
| NdeI | CATATG | 1 cut(s) | 375 |
| NdeII | GATC | 3 cut(s) | 109, 358, 542 |
| NlaIII | CATG | 8 cut(s) | 209, 248, 256, 265, 393, 420, 856, 914 |
| NlaIV | GGNNCC | 2 cut(s) | 236, 397 |
| NmuCI | GTSAC | 1 cut(s) | 614 |
| NsiI | ATGCAT | 1 cut(s) | 493 |
| NspI | RCATGY | 4 cut(s) | 248, 256, 856, 914 |
| OliI | CACNNNNGTG | 1 cut(s) | 557 |
| PaeI | GCATGC | 1 cut(s) | 914 |
| PciI | ACATGT | 1 cut(s) | 244 |
| PciSI | GCTCTTC | 1 cut(s) | 336 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 56 |
| PdmI | GAANNNNTTC | 1 cut(s) | 894 |
| PfeI | GAWTC | 2 cut(s) | 379, 867 |
| Ppu21I | YACGTR | 1 cut(s) | 539 |
| PpuMI | RGGWCCY | 1 cut(s) | 683 |
| PscI | ACATGT | 1 cut(s) | 244 |
| PsiI | TTATAA | 1 cut(s) | 585 |
| Psp5II | RGGWCCY | 1 cut(s) | 683 |
| PspN4I | GGNNCC | 2 cut(s) | 236, 397 |
| PspPI | GGNCC | 3 cut(s) | 235, 386, 683 |
| PspPPI | RGGWCCY | 1 cut(s) | 683 |
| PsuI | RGATCY | 1 cut(s) | 542 |
| RsaI | GTAC | 1 cut(s) | 249 |
| RsaNI | GTAC | 1 cut(s) | 248 |
| RseI | CAYNNNNRTG | 2 cut(s) | 557, 621 |
| SalI | GTCGAC | 1 cut(s) | 824 |
| SapI | GCTCTTC | 1 cut(s) | 336 |
| SaqAI | TTAA | 5 cut(s) | 75, 285, 401, 792, 922 |
| Sau3AI | GATC | 3 cut(s) | 109, 358, 542 |
| Sau96I | GGNCC | 3 cut(s) | 235, 386, 683 |
| ScrFI | CCNGG | 1 cut(s) | 719 |
| SduI | GDGCHC | 1 cut(s) | 769 |
| SetI | ASST | 9 cut(s) | 53, 87, 129, 285, 401, 541, 685, 758, 778 |
| SfaNI | GCATC | 4 cut(s) | 425, 478, 739, 862 |
| SfcI | CTRYAG | 1 cut(s) | 885 |
| SinI | GGWCC | 2 cut(s) | 386, 683 |
| SmiI | ATTTAAAT | 1 cut(s) | 793 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 557, 621 |
| SmlI | CTYRAG | 1 cut(s) | 149 |
| SmoI | CTYRAG | 1 cut(s) | 149 |
| SnaBI | TACGTA | 1 cut(s) | 539 |
| SphI | GCATGC | 1 cut(s) | 914 |
| Sse9I | AATT | 6 cut(s) | 61, 72, 221, 466, 740, 794 |
| SsiI | CCGC | 1 cut(s) | 307 |
| SspMI | CTAG | 2 cut(s) | 93, 899 |
| StyD4I | CCNGG | 1 cut(s) | 717 |
| SwaI | ATTTAAAT | 1 cut(s) | 793 |
| TaaI | ACNGT | 6 cut(s) | 386, 411, 475, 606, 823, 886 |
| TaiI | ACGT | 2 cut(s) | 53, 541 |
| TaqI | TCGA | 5 cut(s) | 505, 726, 747, 825, 870 |
| TasI | AATT | 6 cut(s) | 61, 72, 221, 466, 740, 794 |
| TatI | WGTACW | 1 cut(s) | 247 |
| TfiI | GAWTC | 2 cut(s) | 379, 867 |
| Tru1I | TTAA | 5 cut(s) | 75, 285, 401, 792, 922 |
| Tru9I | TTAA | 5 cut(s) | 75, 285, 401, 792, 922 |
| TscAI | CASTG | 1 cut(s) | 478 |
| TseFI | GTSAC | 1 cut(s) | 614 |
| Tsp45I | GTSAC | 1 cut(s) | 614 |
| TspDTI | ATGAA | 6 cut(s) | 285, 354, 405, 437, 744, 818 |
| TspRI | CASTG | 1 cut(s) | 478 |
| VneI | GTGCAC | 1 cut(s) | 765 |
| VpaK11BI | GGWCC | 2 cut(s) | 386, 683 |
| XapI | RAATTY | 3 cut(s) | 221, 466, 794 |
| XceI | RCATGY | 4 cut(s) | 248, 256, 856, 914 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 184, 777 |
| XmiI | GTMKAC | 2 cut(s) | 675, 825 |
| XmnI | GAANNNNTTC | 1 cut(s) | 894 |
| XspI | CTAG | 2 cut(s) | 93, 899 |
| Zsp2I | ATGCAT | 1 cut(s) | 493 |