Helitron helicase-like domain at N-terminus
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Helitron_like_N | PF14214 | 464 - 646 | 4.1e-58 | Helitron helicase-like domain at N-terminus |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1551, 1715, 1959 |
| AatII | GACGTC | 1 cut(s) | 2185 |
| AccB1I | GGYRCC | 1 cut(s) | 151 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 707 |
| AccI | GTMKAC | 2 cut(s) | 1102, 1687 |
| AccIII | TCCGGA | 1 cut(s) | 102 |
| AciI | CCGC | 1 cut(s) | 2073 |
| AclWI | GGATC | 4 cut(s) | 692, 705, 817, 950 |
| AcoI | YGGCCR | 2 cut(s) | 838, 1739 |
| AcsI | RAATTY | 9 cut(s) | 139, 651, 723, 1043, 1064, 1324, 1351, 1901, 2123 |
| AcuI | CTGAAG | 3 cut(s) | 354, 1173, 1557 |
| AcyI | GRCGYC | 1 cut(s) | 2182 |
| AfaI | GTAC | 3 cut(s) | 412, 908, 1432 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 707, 878 |
| AflII | CTTAAG | 1 cut(s) | 587 |
| AflIII | ACRYGT | 3 cut(s) | 545, 1885, 1932 |
| AluBI | AGCT | 6 cut(s) | 584, 677, 1388, 1577, 1976, 2032 |
| AluI | AGCT | 6 cut(s) | 584, 677, 1388, 1577, 1976, 2032 |
| Alw21I | GWGCWC | 1 cut(s) | 375 |
| AlwI | GGATC | 4 cut(s) | 692, 705, 817, 950 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1976 |
| Aor13HI | TCCGGA | 1 cut(s) | 102 |
| AoxI | GGCC | 4 cut(s) | 709, 838, 1739, 1793 |
| ApeKI | GCWGC | 1 cut(s) | 1973 |
| ApoI | RAATTY | 9 cut(s) | 139, 651, 723, 1043, 1064, 1324, 1351, 1901, 2123 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1256, 1288 |
| AseI | ATTAAT | 1 cut(s) | 2022 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2116 |
| AspLEI | GCGC | 1 cut(s) | 610 |
| AspS9I | GGNCC | 3 cut(s) | 710, 815, 2066 |
| AsuHPI | GGTGA | 4 cut(s) | 464, 542, 1190, 1316 |
| AsuII | TTCGAA | 2 cut(s) | 1048, 1537 |
| AvaII | GGWCC | 2 cut(s) | 815, 2066 |
| BalI | TGGCCA | 2 cut(s) | 840, 1741 |
| BamHI | GGATCC | 1 cut(s) | 697 |
| BanI | GGYRCC | 1 cut(s) | 151 |
| BbsI | GAAGAC | 1 cut(s) | 1794 |
| Bbv12I | GWGCWC | 1 cut(s) | 375 |
| BbvI | GCAGC | 1 cut(s) | 1985 |
| BccI | CCATC | 3 cut(s) | 142, 297, 1304 |
| BclI | TGATCA | 1 cut(s) | 550 |
| BfaI | CTAG | 1 cut(s) | 1644 |
| BfmI | CTRYAG | 2 cut(s) | 414, 2176 |
| BfrI | CTTAAG | 1 cut(s) | 587 |
| BglII | AGATCT | 1 cut(s) | 1853 |
| BisI | GCNGC | 1 cut(s) | 1974 |
| BlsI | GCNGC | 1 cut(s) | 1975 |
| BmcAI | AGTACT | 2 cut(s) | 412, 1432 |
| Bme18I | GGWCC | 2 cut(s) | 815, 2066 |
| BmgT120I | GGNCC | 3 cut(s) | 710, 815, 2066 |
| BmiI | GGNNCC | 2 cut(s) | 153, 699 |
| BmsI | GCATC | 7 cut(s) | 347, 488, 572, 856, 1465, 1577, 1660 |
| BpiI | GAAGAC | 1 cut(s) | 1794 |
| BpmI | CTGGAG | 1 cut(s) | 1878 |
| Bpu14I | TTCGAA | 2 cut(s) | 1048, 1537 |
| BsaAI | YACGTR | 1 cut(s) | 546 |
| BsaHI | GRCGYC | 1 cut(s) | 2182 |
| BsaWI | WCCGGW | 1 cut(s) | 102 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 707, 878 |
| Bse1I | ACTGG | 1 cut(s) | 1639 |
| Bse3DI | GCAATG | 2 cut(s) | 277, 1735 |
| BseAI | TCCGGA | 1 cut(s) | 102 |
| BseGI | GGATG | 1 cut(s) | 1258 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 707, 878 |
| BseMI | GCAATG | 2 cut(s) | 277, 1735 |
| BseMII | CTCAG | 1 cut(s) | 342 |
| BseNI | ACTGG | 1 cut(s) | 1639 |
| BseXI | GCAGC | 1 cut(s) | 1985 |
| Bsh1285I | CGRYCG | 1 cut(s) | 286 |
| BshFI | GGCC | 4 cut(s) | 711, 840, 1741, 1795 |
| BshNI | GGYRCC | 1 cut(s) | 151 |
| BsiEI | CGRYCG | 1 cut(s) | 286 |
| BsiHKAI | GWGCWC | 1 cut(s) | 375 |
| BsiSI | CCGG | 1 cut(s) | 103 |
| BslFI | GGGAC | 1 cut(s) | 301 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 707, 878 |
| BsmFI | GGGAC | 1 cut(s) | 301 |
| BsnI | GGCC | 4 cut(s) | 711, 840, 1741, 1795 |
| Bsp119I | TTCGAA | 2 cut(s) | 1048, 1537 |
| Bsp1286I | GDGCHC | 1 cut(s) | 375 |
| Bsp13I | TCCGGA | 1 cut(s) | 102 |
| Bsp1407I | TGTACA | 1 cut(s) | 906 |
| BspACI | CCGC | 1 cut(s) | 2073 |
| BspANI | GGCC | 4 cut(s) | 711, 840, 1741, 1795 |
| BspCNI | CTCAG | 1 cut(s) | 343 |
| BspEI | TCCGGA | 1 cut(s) | 102 |
| BspLI | GGNNCC | 2 cut(s) | 153, 699 |
| BspMAI | CTGCAG | 1 cut(s) | 418 |
| BspPI | GGATC | 4 cut(s) | 692, 705, 817, 950 |
| BspT104I | TTCGAA | 2 cut(s) | 1048, 1537 |
| BspT107I | GGYRCC | 1 cut(s) | 151 |
| BspTI | CTTAAG | 1 cut(s) | 587 |
| BsrDI | GCAATG | 2 cut(s) | 277, 1735 |
| BsrGI | TGTACA | 1 cut(s) | 906 |
| BsrI | ACTGG | 1 cut(s) | 1639 |
| BssNAI | GTATAC | 1 cut(s) | 1103 |
| BssNI | GRCGYC | 1 cut(s) | 2182 |
| Bst1107I | GTATAC | 1 cut(s) | 1103 |
| Bst4CI | ACNGT | 5 cut(s) | 48, 110, 195, 377, 1489 |
| BstACI | GRCGYC | 1 cut(s) | 2182 |
| BstAFI | CTTAAG | 1 cut(s) | 587 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 125 |
| BstAUI | TGTACA | 1 cut(s) | 906 |
| BstBAI | YACGTR | 1 cut(s) | 546 |
| BstBI | TTCGAA | 2 cut(s) | 1048, 1537 |
| BstC8I | GCNNGC | 5 cut(s) | 497, 501, 675, 1386, 2102 |
| BstDEI | CTNAG | 1 cut(s) | 351 |
| BstF5I | GGATG | 1 cut(s) | 1258 |
| BstHHI | GCGC | 1 cut(s) | 610 |
| BstMCI | CGRYCG | 1 cut(s) | 286 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 125, 717, 1574 |
| BstNSI | RCATGY | 4 cut(s) | 215, 1889, 1936, 2104 |
| BstSFI | CTRYAG | 2 cut(s) | 414, 2176 |
| BstV1I | GCAGC | 1 cut(s) | 1985 |
| BstV2I | GAAGAC | 1 cut(s) | 1794 |
| BstX2I | RGATCY | 2 cut(s) | 697, 1853 |
| BstYI | RGATCY | 2 cut(s) | 697, 1853 |
| BstZ17I | GTATAC | 1 cut(s) | 1103 |
| BsuRI | GGCC | 4 cut(s) | 711, 840, 1741, 1795 |
| BtsCI | GGATG | 1 cut(s) | 1258 |
| BtsI | GCAGTG | 1 cut(s) | 1563 |
| BtsIMutI | CAGTG | 6 cut(s) | 44, 115, 150, 200, 373, 1563 |
| Cac8I | GCNNGC | 5 cut(s) | 497, 501, 675, 1386, 2102 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1976 |
| CfoI | GCGC | 1 cut(s) | 610 |
| Cfr13I | GGNCC | 3 cut(s) | 710, 815, 2066 |
| CseI | GACGC | 1 cut(s) | 402 |
| Csp6I | GTAC | 3 cut(s) | 411, 907, 1431 |
| CviAII | CATG | 7 cut(s) | 212, 320, 965, 1886, 1925, 1933, 2101 |
| CviQI | GTAC | 3 cut(s) | 411, 907, 1431 |
| DdeI | CTNAG | 1 cut(s) | 351 |
| DraI | TTTAAA | 3 cut(s) | 829, 1819, 2038 |
| EaeI | YGGCCR | 2 cut(s) | 838, 1739 |
| Eco147I | AGGCCT | 1 cut(s) | 1795 |
| Eco32I | GATATC | 1 cut(s) | 100 |
| Eco47I | GGWCC | 2 cut(s) | 815, 2066 |
| Eco57I | CTGAAG | 3 cut(s) | 354, 1173, 1557 |
| EcoO109I | RGGNCCY | 1 cut(s) | 815 |
| EcoRV | GATATC | 1 cut(s) | 100 |
| EcoT22I | ATGCAT | 1 cut(s) | 565 |
| FaeI | CATG | 7 cut(s) | 215, 323, 968, 1889, 1928, 1936, 2104 |
| FaqI | GGGAC | 1 cut(s) | 301 |
| FatI | CATG | 7 cut(s) | 211, 319, 964, 1885, 1924, 1932, 2100 |
| FauNDI | CATATG | 1 cut(s) | 1300 |
| FbaI | TGATCA | 1 cut(s) | 550 |
| FblI | GTMKAC | 2 cut(s) | 1102, 1687 |
| Fnu4HI | GCNGC | 1 cut(s) | 1974 |
| FokI | GGATG | 1 cut(s) | 1245 |
| Fsp4HI | GCNGC | 1 cut(s) | 1974 |
| FspBI | CTAG | 1 cut(s) | 1644 |
| GlaI | GCGC | 1 cut(s) | 609 |
| GluI | GCNGC | 1 cut(s) | 1974 |
| GsuI | CTGGAG | 1 cut(s) | 1878 |
| HaeIII | GGCC | 4 cut(s) | 711, 840, 1741, 1795 |
| HapII | CCGG | 1 cut(s) | 103 |
| HgaI | GACGC | 1 cut(s) | 402 |
| HhaI | GCGC | 1 cut(s) | 610 |
| Hin1I | GRCGYC | 1 cut(s) | 2182 |
| Hin1II | CATG | 7 cut(s) | 215, 323, 968, 1889, 1928, 1936, 2104 |
| Hin6I | GCGC | 1 cut(s) | 608 |
| HinP1I | GCGC | 1 cut(s) | 608 |
| HincII | GTYRAC | 1 cut(s) | 1115 |
| HindII | GTYRAC | 1 cut(s) | 1115 |
| HinfI | GANTC | 6 cut(s) | 428, 524, 1220, 1405, 1985, 2059 |
| HpaII | CCGG | 1 cut(s) | 103 |
| HphI | GGTGA | 4 cut(s) | 464, 542, 1190, 1316 |
| Hpy166II | GTNNAC | 7 cut(s) | 424, 1103, 1115, 1130, 1448, 1688, 1891 |
| Hpy188I | TCNGA | 4 cut(s) | 97, 352, 743, 1404 |
| Hpy8I | GTNNAC | 7 cut(s) | 424, 1103, 1115, 1130, 1448, 1688, 1891 |
| Hpy99I | CGWCG | 1 cut(s) | 2187 |
| HpyAV | CCTTC | 5 cut(s) | 200, 234, 443, 882, 2178 |
| HpyCH4III | ACNGT | 5 cut(s) | 48, 110, 195, 377, 1489 |
| HpyCH4IV | ACGT | 3 cut(s) | 59, 545, 2182 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 125, 717, 1574 |
| HpyF3I | CTNAG | 1 cut(s) | 351 |
| HpySE526I | ACGT | 3 cut(s) | 59, 545, 2182 |
| Hsp92I | GRCGYC | 1 cut(s) | 2182 |
| Hsp92II | CATG | 7 cut(s) | 215, 323, 968, 1889, 1928, 1936, 2104 |
| HspAI | GCGC | 1 cut(s) | 608 |
| Kpn2I | TCCGGA | 1 cut(s) | 102 |
| Ksp22I | TGATCA | 1 cut(s) | 550 |
| LmnI | GCTCC | 1 cut(s) | 779 |
| Lsp1109I | GCAGC | 1 cut(s) | 1985 |
| LweI | GCATC | 7 cut(s) | 347, 488, 572, 856, 1465, 1577, 1660 |
| MaeI | CTAG | 1 cut(s) | 1644 |
| MaeII | ACGT | 3 cut(s) | 59, 545, 2182 |
| MaeIII | GTNAC | 3 cut(s) | 377, 1178, 1275 |
| MfeI | CAATTG | 2 cut(s) | 786, 902 |
| MflI | RGATCY | 2 cut(s) | 697, 1853 |
| MhlI | GDGCHC | 1 cut(s) | 375 |
| MlsI | TGGCCA | 2 cut(s) | 840, 1741 |
| MluNI | TGGCCA | 2 cut(s) | 840, 1741 |
| MnlI | CCTC | 6 cut(s) | 164, 174, 226, 621, 1907, 1932 |
| Mox20I | TGGCCA | 2 cut(s) | 840, 1741 |
| Mph1103I | ATGCAT | 1 cut(s) | 565 |
| MroI | TCCGGA | 1 cut(s) | 102 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2116 |
| MscI | TGGCCA | 2 cut(s) | 840, 1741 |
| MslI | CAYNNNNRTG | 3 cut(s) | 216, 558, 969 |
| Msp20I | TGGCCA | 2 cut(s) | 840, 1741 |
| MspA1I | CMGCKG | 2 cut(s) | 1577, 1976 |
| MspCI | CTTAAG | 1 cut(s) | 587 |
| MspI | CCGG | 1 cut(s) | 103 |
| MunI | CAATTG | 2 cut(s) | 786, 902 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 125, 717, 1574 |
| NdeI | CATATG | 1 cut(s) | 1300 |
| NlaIII | CATG | 7 cut(s) | 215, 323, 968, 1889, 1928, 1936, 2104 |
| NlaIV | GGNNCC | 2 cut(s) | 153, 699 |
| NmuCI | GTSAC | 2 cut(s) | 377, 1178 |
| NsiI | ATGCAT | 1 cut(s) | 565 |
| NspI | RCATGY | 4 cut(s) | 215, 1889, 1936, 2104 |
| NspV | TTCGAA | 2 cut(s) | 1048, 1537 |
| PaeI | GCATGC | 1 cut(s) | 2104 |
| PceI | AGGCCT | 1 cut(s) | 1795 |
| PciI | ACATGT | 2 cut(s) | 1885, 1932 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2116 |
| PfeI | GAWTC | 6 cut(s) | 428, 524, 1220, 1405, 1985, 2059 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 707 |
| PkrI | GCNGC | 1 cut(s) | 1975 |
| Ple19I | CGATCG | 1 cut(s) | 286 |
| Ppu21I | YACGTR | 1 cut(s) | 546 |
| PpuMI | RGGWCCY | 1 cut(s) | 815 |
| PscI | ACATGT | 2 cut(s) | 1885, 1932 |
| PshBI | ATTAAT | 1 cut(s) | 2022 |
| PsiI | TTATAA | 3 cut(s) | 1551, 1715, 1959 |
| Psp5II | RGGWCCY | 1 cut(s) | 815 |
| PspN4I | GGNNCC | 2 cut(s) | 153, 699 |
| PspPI | GGNCC | 3 cut(s) | 710, 815, 2066 |
| PspPPI | RGGWCCY | 1 cut(s) | 815 |
| PstI | CTGCAG | 1 cut(s) | 418 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1976 |
| PsuI | RGATCY | 2 cut(s) | 697, 1853 |
| PvuI | CGATCG | 1 cut(s) | 286 |
| PvuII | CAGCTG | 2 cut(s) | 1577, 1976 |
| RsaI | GTAC | 3 cut(s) | 412, 908, 1432 |
| RsaNI | GTAC | 3 cut(s) | 411, 907, 1431 |
| RseI | CAYNNNNRTG | 3 cut(s) | 216, 558, 969 |
| SatI | GCNGC | 1 cut(s) | 1974 |
| Sau96I | GGNCC | 3 cut(s) | 710, 815, 2066 |
| ScaI | AGTACT | 2 cut(s) | 412, 1432 |
| SduI | GDGCHC | 1 cut(s) | 375 |
| SfaNI | GCATC | 7 cut(s) | 347, 488, 572, 856, 1465, 1577, 1660 |
| SfcI | CTRYAG | 2 cut(s) | 414, 2176 |
| SfuI | TTCGAA | 2 cut(s) | 1048, 1537 |
| SinI | GGWCC | 2 cut(s) | 815, 2066 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 216, 558, 969 |
| SmlI | CTYRAG | 1 cut(s) | 587 |
| SmoI | CTYRAG | 1 cut(s) | 587 |
| SphI | GCATGC | 1 cut(s) | 2104 |
| SseBI | AGGCCT | 1 cut(s) | 1795 |
| SsiI | CCGC | 1 cut(s) | 2073 |
| SspI | AATATT | 2 cut(s) | 979, 2151 |
| SspMI | CTAG | 1 cut(s) | 1644 |
| StuI | AGGCCT | 1 cut(s) | 1795 |
| TaaI | ACNGT | 5 cut(s) | 48, 110, 195, 377, 1489 |
| TaiI | ACGT | 3 cut(s) | 62, 548, 2185 |
| TaqI | TCGA | 4 cut(s) | 167, 286, 1048, 1537 |
| TatI | WGTACW | 3 cut(s) | 410, 906, 1430 |
| TfiI | GAWTC | 6 cut(s) | 428, 524, 1220, 1405, 1985, 2059 |
| TscAI | CASTG | 6 cut(s) | 51, 115, 150, 200, 380, 1570 |
| TseFI | GTSAC | 2 cut(s) | 377, 1178 |
| TseI | GCWGC | 1 cut(s) | 1973 |
| Tsp45I | GTSAC | 2 cut(s) | 377, 1178 |
| TspGWI | ACGGA | 1 cut(s) | 2079 |
| TspRI | CASTG | 6 cut(s) | 51, 115, 150, 200, 380, 1570 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 707 |
| Vha464I | CTTAAG | 1 cut(s) | 587 |
| VpaK11BI | GGWCC | 2 cut(s) | 815, 2066 |
| VspI | ATTAAT | 1 cut(s) | 2022 |
| XapI | RAATTY | 9 cut(s) | 139, 651, 723, 1043, 1064, 1324, 1351, 1901, 2123 |
| XceI | RCATGY | 4 cut(s) | 215, 1889, 1936, 2104 |
| XmiI | GTMKAC | 2 cut(s) | 1102, 1687 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2116 |
| XspI | CTAG | 1 cut(s) | 1644 |
| ZraI | GACGTC | 1 cut(s) | 2183 |
| ZrmI | AGTACT | 2 cut(s) | 412, 1432 |
| Zsp2I | ATGCAT | 1 cut(s) | 565 |