Helitron helicase-like domain at N-terminus
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Helitron_like_N | PF14214 | 311 - 360 | 4e-08 | Helitron helicase-like domain at N-terminus |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 462 |
| AclWI | GGATC | 3 cut(s) | 66, 105, 319 |
| AcsI | RAATTY | 2 cut(s) | 362, 456 |
| AfaI | GTAC | 1 cut(s) | 133 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 660 |
| AflIII | ACRYGT | 1 cut(s) | 221 |
| AgsI | TTSAA | 6 cut(s) | 265, 411, 575, 595, 757, 1034 |
| AjnI | CCWGG | 1 cut(s) | 958 |
| AluBI | AGCT | 1 cut(s) | 79 |
| AluI | AGCT | 1 cut(s) | 79 |
| Alw21I | GWGCWC | 2 cut(s) | 214, 475 |
| Alw26I | GTCTC | 1 cut(s) | 251 |
| Alw44I | GTGCAC | 2 cut(s) | 210, 471 |
| AlwI | GGATC | 3 cut(s) | 66, 105, 319 |
| ApaLI | GTGCAC | 2 cut(s) | 210, 471 |
| ApeKI | GCWGC | 4 cut(s) | 105, 108, 679, 728 |
| ApoI | RAATTY | 2 cut(s) | 362, 456 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 250, 282 |
| AseI | ATTAAT | 2 cut(s) | 438, 888 |
| AspLEI | GCGC | 5 cut(s) | 105, 129, 164, 642, 957 |
| AspS9I | GGNCC | 1 cut(s) | 19 |
| AsuHPI | GGTGA | 1 cut(s) | 974 |
| AsuII | TTCGAA | 2 cut(s) | 278, 625 |
| AvaII | GGWCC | 1 cut(s) | 19 |
| BaeGI | GKGCMC | 3 cut(s) | 214, 475, 568 |
| BbsI | GAAGAC | 2 cut(s) | 805, 916 |
| Bbv12I | GWGCWC | 2 cut(s) | 214, 475 |
| BbvI | GCAGC | 4 cut(s) | 117, 120, 691, 715 |
| BccI | CCATC | 3 cut(s) | 177, 624, 718 |
| BceAI | ACGGC | 2 cut(s) | 114, 1007 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 917, 951 |
| BciT130I | CCWGG | 1 cut(s) | 960 |
| BciVI | GTATCC | 1 cut(s) | 858 |
| BcoDI | GTCTC | 1 cut(s) | 251 |
| BfaI | CTAG | 2 cut(s) | 80, 165 |
| BfoI | RGCGCY | 1 cut(s) | 643 |
| BfuI | GTATCC | 1 cut(s) | 858 |
| BisI | GCNGC | 4 cut(s) | 106, 109, 680, 729 |
| BlsI | GCNGC | 4 cut(s) | 107, 110, 681, 730 |
| Bme1390I | CCNGG | 1 cut(s) | 960 |
| Bme18I | GGWCC | 1 cut(s) | 19 |
| BmgT120I | GGNCC | 1 cut(s) | 19 |
| BmrFI | CCNGG | 1 cut(s) | 960 |
| BmrI | ACTGGG | 1 cut(s) | 116 |
| BmsI | GCATC | 2 cut(s) | 725, 942 |
| BmuI | ACTGGG | 1 cut(s) | 116 |
| BoxI | GACNNNNGTC | 1 cut(s) | 916 |
| BpiI | GAAGAC | 2 cut(s) | 805, 916 |
| Bpu14I | TTCGAA | 2 cut(s) | 278, 625 |
| Bsa29I | ATCGAT | 1 cut(s) | 535 |
| BsaAI | YACGTR | 1 cut(s) | 1024 |
| BsaBI | GATNNNNATC | 1 cut(s) | 969 |
| BsaI | GGTCTC | 1 cut(s) | 251 |
| BsaJI | CCNNGG | 2 cut(s) | 631, 958 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 660 |
| Bse1I | ACTGG | 2 cut(s) | 122, 573 |
| Bse3DI | GCAATG | 1 cut(s) | 241 |
| Bse8I | GATNNNNATC | 1 cut(s) | 969 |
| BseBI | CCWGG | 1 cut(s) | 960 |
| BseCI | ATCGAT | 1 cut(s) | 535 |
| BseDI | CCNNGG | 2 cut(s) | 631, 958 |
| BseGI | GGATG | 1 cut(s) | 188 |
| BseJI | GATNNNNATC | 1 cut(s) | 969 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 660 |
| BseMI | GCAATG | 1 cut(s) | 241 |
| BseMII | CTCAG | 3 cut(s) | 66, 507, 1060 |
| BseNI | ACTGG | 2 cut(s) | 122, 573 |
| BseSI | GKGCMC | 3 cut(s) | 214, 475, 568 |
| BseXI | GCAGC | 4 cut(s) | 117, 120, 691, 715 |
| Bsh1285I | CGRYCG | 1 cut(s) | 825 |
| BshVI | ATCGAT | 1 cut(s) | 535 |
| BsiEI | CGRYCG | 1 cut(s) | 825 |
| BsiHKAI | GWGCWC | 2 cut(s) | 214, 475 |
| BslFI | GGGAC | 1 cut(s) | 176 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 660 |
| BsmAI | GTCTC | 1 cut(s) | 251 |
| BsmFI | GGGAC | 1 cut(s) | 176 |
| Bso31I | GGTCTC | 1 cut(s) | 251 |
| Bsp119I | TTCGAA | 2 cut(s) | 278, 625 |
| Bsp1286I | GDGCHC | 3 cut(s) | 214, 475, 568 |
| Bsp143I | GATC | 3 cut(s) | 58, 97, 324 |
| BspCNI | CTCAG | 3 cut(s) | 67, 508, 1059 |
| BspDI | ATCGAT | 1 cut(s) | 535 |
| BspHI | TCATGA | 3 cut(s) | 10, 52, 895 |
| BspPI | GGATC | 3 cut(s) | 66, 105, 319 |
| BspT104I | TTCGAA | 2 cut(s) | 278, 625 |
| BspTNI | GGTCTC | 1 cut(s) | 251 |
| BsrDI | GCAATG | 1 cut(s) | 241 |
| BsrI | ACTGG | 2 cut(s) | 122, 573 |
| BssECI | CCNNGG | 2 cut(s) | 631, 958 |
| BssMI | GATC | 3 cut(s) | 58, 97, 324 |
| Bst2UI | CCWGG | 1 cut(s) | 960 |
| Bst4CI | ACNGT | 2 cut(s) | 243, 1005 |
| Bst6I | CTCTTC | 1 cut(s) | 763 |
| BstBAI | YACGTR | 1 cut(s) | 1024 |
| BstBI | TTCGAA | 2 cut(s) | 278, 625 |
| BstC8I | GCNNGC | 2 cut(s) | 210, 662 |
| BstDEI | CTNAG | 4 cut(s) | 75, 215, 516, 1046 |
| BstF5I | GGATG | 1 cut(s) | 188 |
| BstH2I | RGCGCY | 1 cut(s) | 643 |
| BstHHI | GCGC | 5 cut(s) | 105, 129, 164, 642, 957 |
| BstKTI | GATC | 3 cut(s) | 61, 100, 327 |
| BstMAI | GTCTC | 1 cut(s) | 251 |
| BstMBI | GATC | 3 cut(s) | 58, 97, 324 |
| BstMCI | CGRYCG | 1 cut(s) | 825 |
| BstNI | CCWGG | 1 cut(s) | 960 |
| BstNSI | RCATGY | 2 cut(s) | 225, 425 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 916 |
| BstSCI | CCNGG | 1 cut(s) | 958 |
| BstSLI | GKGCMC | 3 cut(s) | 214, 475, 568 |
| BstV1I | GCAGC | 4 cut(s) | 117, 120, 691, 715 |
| BstV2I | GAAGAC | 2 cut(s) | 805, 916 |
| Bsu15I | ATCGAT | 1 cut(s) | 535 |
| BsuI | GTATCC | 1 cut(s) | 858 |
| BsuTUI | ATCGAT | 1 cut(s) | 535 |
| BtsCI | GGATG | 1 cut(s) | 188 |
| BtsI | GCAGTG | 1 cut(s) | 118 |
| BtsIMutI | CAGTG | 5 cut(s) | 72, 118, 129, 513, 566 |
| Cac8I | GCNNGC | 2 cut(s) | 210, 662 |
| CciI | TCATGA | 3 cut(s) | 10, 52, 895 |
| CfoI | GCGC | 5 cut(s) | 105, 129, 164, 642, 957 |
| Cfr13I | GGNCC | 1 cut(s) | 19 |
| ClaI | ATCGAT | 1 cut(s) | 535 |
| Csp6I | GTAC | 1 cut(s) | 132 |
| CviAII | CATG | 8 cut(s) | 11, 53, 222, 422, 521, 841, 896, 921 |
| CviJI | RGCY | 7 cut(s) | 79, 383, 630, 664, 682, 994, 1054 |
| CviKI_1 | RGCY | 7 cut(s) | 79, 383, 630, 664, 682, 994, 1054 |
| CviQI | GTAC | 1 cut(s) | 132 |
| DdeI | CTNAG | 4 cut(s) | 75, 215, 516, 1046 |
| DpnI | GATC | 3 cut(s) | 60, 99, 326 |
| DpnII | GATC | 3 cut(s) | 58, 97, 324 |
| Eam1104I | CTCTTC | 1 cut(s) | 763 |
| EarI | CTCTTC | 1 cut(s) | 763 |
| Eco31I | GGTCTC | 1 cut(s) | 251 |
| Eco47I | GGWCC | 1 cut(s) | 19 |
| EcoRII | CCWGG | 1 cut(s) | 958 |
| EcoT22I | ATGCAT | 1 cut(s) | 940 |
| FaeI | CATG | 8 cut(s) | 14, 56, 225, 425, 524, 844, 899, 924 |
| FaqI | GGGAC | 1 cut(s) | 176 |
| FatI | CATG | 8 cut(s) | 10, 52, 221, 421, 520, 840, 895, 920 |
| FauNDI | CATATG | 2 cut(s) | 39, 874 |
| Fnu4HI | GCNGC | 4 cut(s) | 106, 109, 680, 729 |
| FokI | GGATG | 1 cut(s) | 195 |
| Fsp4HI | GCNGC | 4 cut(s) | 106, 109, 680, 729 |
| FspBI | CTAG | 2 cut(s) | 80, 165 |
| GlaI | GCGC | 5 cut(s) | 104, 128, 163, 641, 956 |
| GluI | GCNGC | 4 cut(s) | 106, 109, 680, 729 |
| HaeII | RGCGCY | 1 cut(s) | 643 |
| HhaI | GCGC | 5 cut(s) | 105, 129, 164, 642, 957 |
| Hin1II | CATG | 8 cut(s) | 14, 56, 225, 425, 524, 844, 899, 924 |
| Hin6I | GCGC | 5 cut(s) | 103, 127, 162, 640, 955 |
| HinP1I | GCGC | 5 cut(s) | 103, 127, 162, 640, 955 |
| HincII | GTYRAC | 1 cut(s) | 118 |
| HindII | GTYRAC | 1 cut(s) | 118 |
| HinfI | GANTC | 5 cut(s) | 431, 595, 801, 818, 1034 |
| HphI | GGTGA | 1 cut(s) | 974 |
| Hpy166II | GTNNAC | 5 cut(s) | 118, 212, 405, 473, 707 |
| Hpy188I | TCNGA | 7 cut(s) | 63, 340, 368, 380, 544, 635, 827 |
| Hpy188III | TCNNGA | 5 cut(s) | 11, 53, 254, 805, 896 |
| Hpy8I | GTNNAC | 5 cut(s) | 118, 212, 405, 473, 707 |
| HpyAV | CCTTC | 2 cut(s) | 271, 693 |
| HpyCH4III | ACNGT | 2 cut(s) | 243, 1005 |
| HpyCH4IV | ACGT | 2 cut(s) | 694, 1023 |
| HpyCH4V | TGCA | 9 cut(s) | 212, 234, 239, 421, 473, 660, 716, 844, 938 |
| HpyF3I | CTNAG | 4 cut(s) | 75, 215, 516, 1046 |
| HpySE526I | ACGT | 2 cut(s) | 694, 1023 |
| Hsp92II | CATG | 8 cut(s) | 14, 56, 225, 425, 524, 844, 899, 924 |
| HspAI | GCGC | 5 cut(s) | 103, 127, 162, 640, 955 |
| Kzo9I | GATC | 3 cut(s) | 58, 97, 324 |
| Lsp1109I | GCAGC | 4 cut(s) | 117, 120, 691, 715 |
| LweI | GCATC | 2 cut(s) | 725, 942 |
| MaeI | CTAG | 2 cut(s) | 80, 165 |
| MaeII | ACGT | 2 cut(s) | 694, 1023 |
| MaeIII | GTNAC | 2 cut(s) | 945, 1061 |
| MalI | GATC | 3 cut(s) | 60, 99, 326 |
| MboI | GATC | 3 cut(s) | 58, 97, 324 |
| MboII | GAAGA | 4 cut(s) | 434, 780, 810, 921 |
| MfeI | CAATTG | 2 cut(s) | 203, 655 |
| MhlI | GDGCHC | 3 cut(s) | 214, 475, 568 |
| MlyI | GAGTC | 2 cut(s) | 795, 812 |
| MmeI | TCCRAC | 2 cut(s) | 352, 805 |
| Mph1103I | ATGCAT | 1 cut(s) | 940 |
| MseI | TTAA | 5 cut(s) | 174, 438, 776, 813, 888 |
| MslI | CAYNNNNRTG | 3 cut(s) | 410, 426, 877 |
| MspR9I | CCNGG | 1 cut(s) | 960 |
| MunI | CAATTG | 2 cut(s) | 203, 655 |
| MvaI | CCWGG | 1 cut(s) | 960 |
| NdeI | CATATG | 2 cut(s) | 39, 874 |
| NdeII | GATC | 3 cut(s) | 58, 97, 324 |
| NlaIII | CATG | 8 cut(s) | 14, 56, 225, 425, 524, 844, 899, 924 |
| NsiI | ATGCAT | 1 cut(s) | 940 |
| NspI | RCATGY | 2 cut(s) | 225, 425 |
| NspV | TTCGAA | 2 cut(s) | 278, 625 |
| PagI | TCATGA | 3 cut(s) | 10, 52, 895 |
| PciI | ACATGT | 1 cut(s) | 221 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 831 |
| PfeI | GAWTC | 3 cut(s) | 431, 595, 1034 |
| PflFI | GACNNNGTC | 1 cut(s) | 821 |
| PkrI | GCNGC | 4 cut(s) | 107, 110, 681, 730 |
| PleI | GAGTC | 2 cut(s) | 795, 812 |
| PpsI | GAGTC | 2 cut(s) | 795, 812 |
| Ppu21I | YACGTR | 1 cut(s) | 1024 |
| PscI | ACATGT | 1 cut(s) | 221 |
| PshAI | GACNNNNGTC | 1 cut(s) | 916 |
| PshBI | ATTAAT | 2 cut(s) | 438, 888 |
| PsiI | TTATAA | 1 cut(s) | 462 |
| Psp6I | CCWGG | 1 cut(s) | 958 |
| PspGI | CCWGG | 1 cut(s) | 958 |
| PspPI | GGNCC | 1 cut(s) | 19 |
| PsyI | GACNNNGTC | 1 cut(s) | 821 |
| RsaI | GTAC | 1 cut(s) | 133 |
| RsaNI | GTAC | 1 cut(s) | 132 |
| RseI | CAYNNNNRTG | 3 cut(s) | 410, 426, 877 |
| SaqAI | TTAA | 5 cut(s) | 174, 438, 776, 813, 888 |
| SatI | GCNGC | 4 cut(s) | 106, 109, 680, 729 |
| Sau3AI | GATC | 3 cut(s) | 58, 97, 324 |
| Sau96I | GGNCC | 1 cut(s) | 19 |
| SchI | GAGTC | 2 cut(s) | 795, 812 |
| ScrFI | CCNGG | 1 cut(s) | 960 |
| SduI | GDGCHC | 3 cut(s) | 214, 475, 568 |
| SfaNI | GCATC | 2 cut(s) | 725, 942 |
| SfuI | TTCGAA | 2 cut(s) | 278, 625 |
| SinI | GGWCC | 1 cut(s) | 19 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 410, 426, 877 |
| SspI | AATATT | 1 cut(s) | 289 |
| SspMI | CTAG | 2 cut(s) | 80, 165 |
| StyD4I | CCNGG | 1 cut(s) | 958 |
| TaaI | ACNGT | 2 cut(s) | 243, 1005 |
| TaiI | ACGT | 2 cut(s) | 697, 1026 |
| TaqI | TCGA | 6 cut(s) | 253, 278, 445, 535, 625, 982 |
| TaqII | GACCGA | 1 cut(s) | 811 |
| TfiI | GAWTC | 3 cut(s) | 431, 595, 1034 |
| Tru1I | TTAA | 5 cut(s) | 174, 438, 776, 813, 888 |
| Tru9I | TTAA | 5 cut(s) | 174, 438, 776, 813, 888 |
| TscAI | CASTG | 5 cut(s) | 79, 118, 129, 520, 573 |
| TseI | GCWGC | 4 cut(s) | 105, 108, 679, 728 |
| TspDTI | ATGAA | 6 cut(s) | 17, 59, 239, 444, 537, 981 |
| TspRI | CASTG | 5 cut(s) | 79, 118, 129, 520, 573 |
| Tth111I | GACNNNGTC | 1 cut(s) | 821 |
| VneI | GTGCAC | 2 cut(s) | 210, 471 |
| VpaK11BI | GGWCC | 1 cut(s) | 19 |
| VspI | ATTAAT | 2 cut(s) | 438, 888 |
| XapI | RAATTY | 2 cut(s) | 362, 456 |
| XceI | RCATGY | 2 cut(s) | 225, 425 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 791 |
| XspI | CTAG | 2 cut(s) | 80, 165 |
| Zsp2I | ATGCAT | 1 cut(s) | 940 |