Rorug06G0318500

Belongs to the helicase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000080
Physical Location & Seq
Forward (+)
47019873 .. 47021002
1130 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0318500.1

Sequence Viewer

Length: 624 bp
ATGGCAGCCCCGGAACCCAGCAACATCGACGAGGAGCTCTCCGCCGCCTCCACGACCATCTTATTCGACCGCCCCGTCCCCTTGCTCCGCGGGCCGGTCCGGGCCGGCCCGCCCAACGACCCGTCGTCCGGCCCGTACGTGCTGGCATTCCGCGACCCGAAAACCTGGGCCAACGCCTACAGAGCGTGCGAGTCGAAGATCCTCCACCAGTGCGAGGCCGGGTCGAGAATCGGGTGCGCCCTCAGCGCATCGAGCAAGTGTAAGCCGCCGTGGTGGCGGTTTCTGATTGGGCAGAAAGCGCCGGAGTTGAAGCAGAGGGCGGAGTGCGAGGAGAGAGAGACGGAGGGGTGTTTGGCTACGGCGAAGGAGAAGTGCGTTGGGTTTGCGAGAGACAAGTGCTTGGAGCCGTTTAGGGAGGCCAGGGTTTGTGGGGTGAGTAAGAAGCAGGCGGAGAAGATGGTGTGCTGGGCGAGTGTGATCAATAAAAGTAGTACATGGGTGAGTTTGATTGGGTTGGAGAATTGTGGGTTTGGGGCGACGAATTGTAGGGCGGTTGAGCTGGTCGGGTATTCCGGTGAGGTTGATCGGGTTTTAGGTGGTGGCAATGAGACTTTGAAGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

207

Amino Acids

22.49

Weight (kDa)

8.24

Isoelectric Point (pI)

39.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 74
AccII CGCG 2 cut(s) 90, 153
AclWI GGATC 1 cut(s) 193
AfaI GTAC 2 cut(s) 137, 493
AfiI CCNNNNNNNGG 3 cut(s) 94, 128, 214
AgsI TTSAA 2 cut(s) 310, 616
AhdI GACNNNNNGTC 1 cut(s) 124
AjnI CCWGG 2 cut(s) 164, 419
AluBI AGCT 2 cut(s) 37, 559
AluI AGCT 2 cut(s) 37, 559
Alw21I GWGCWC 1 cut(s) 39
Alw26I GTCTC 3 cut(s) 332, 384, 602
AlwI GGATC 1 cut(s) 193
AoxI GGCC 7 cut(s) 92, 102, 106, 130, 168, 216, 417
ApeKI GCWGC 1 cut(s) 5
AspLEI GCGC 3 cut(s) 239, 248, 301
AspS9I GGNCC 6 cut(s) 92, 97, 102, 107, 131, 168
AsuC2I CCSGG 3 cut(s) 11, 101, 220
AsuHPI GGTGA 3 cut(s) 445, 511, 587
AvaII GGWCC 1 cut(s) 97
BanII GRGCYC 1 cut(s) 39
Bbv12I GWGCWC 1 cut(s) 39
BbvCI CCTCAGC 1 cut(s) 242
BbvI GCAGC 1 cut(s) 17
BccI CCATC 2 cut(s) 65, 451
BceAI ACGGC 3 cut(s) 253, 375, 391
BciT130I CCWGG 2 cut(s) 166, 421
BclI TGATCA 1 cut(s) 477
BcnI CCSGG 3 cut(s) 11, 101, 220
BcoDI GTCTC 3 cut(s) 332, 384, 602
BfmI CTRYAG 1 cut(s) 178
BfoI RGCGCY 1 cut(s) 302
BglI GCCNNNNNGGC 1 cut(s) 274
BisI GCNGC 3 cut(s) 6, 45, 266
BlsI GCNGC 3 cut(s) 7, 46, 267
Bme1390I CCNGG 5 cut(s) 11, 101, 166, 220, 421
Bme18I GGWCC 1 cut(s) 97
BmeRI GACNNNNNGTC 1 cut(s) 124
BmgT120I GGNCC 6 cut(s) 92, 97, 102, 107, 131, 168
BmiI GGNNCC 2 cut(s) 15, 405
BmrFI CCNGG 5 cut(s) 11, 101, 166, 220, 421
BmsI GCATC 1 cut(s) 257
BplI GAGNNNNNCTC 2 cut(s) 23, 55
Bpu10I CCTNAGC 1 cut(s) 242
BpuMI CCSGG 3 cut(s) 11, 101, 220
BsaAI YACGTR 1 cut(s) 139
BsaJI CCNNGG 5 cut(s) 9, 88, 165, 269, 420
BsaWI WCCGGW 1 cut(s) 572
Bsc4I CCNNNNNNNGG 3 cut(s) 94, 128, 214
Bse118I RCCGGY 2 cut(s) 94, 104
Bse1I ACTGG 1 cut(s) 208
Bse3DI GCAATG 1 cut(s) 610
BseBI CCWGG 2 cut(s) 166, 421
BseDI CCNNGG 5 cut(s) 9, 88, 165, 269, 420
BseLI CCNNNNNNNGG 3 cut(s) 94, 128, 214
BseMI GCAATG 1 cut(s) 610
BseMII CTCAG 1 cut(s) 256
BseNI ACTGG 1 cut(s) 208
BseRI GAGGAG 2 cut(s) 47, 344
BseXI GCAGC 1 cut(s) 17
BseYI CCCAGC 2 cut(s) 17, 465
Bsh1236I CGCG 2 cut(s) 90, 153
Bsh1285I CGRYCG 1 cut(s) 70
BshFI GGCC 7 cut(s) 94, 104, 108, 132, 170, 218, 419
BsiEI CGRYCG 1 cut(s) 70
BsiHKAI GWGCWC 1 cut(s) 39
BsiSI CCGG 8 cut(s) 11, 95, 100, 105, 129, 219, 302, 573
BsiWI CGTACG 1 cut(s) 135
BslFI GGGAC 1 cut(s) 62
BslI CCNNNNNNNGG 3 cut(s) 94, 128, 214
BsmAI GTCTC 3 cut(s) 332, 384, 602
BsmBI CGTCTC 1 cut(s) 332
BsmFI GGGAC 1 cut(s) 62
BsmI GAATGC 1 cut(s) 146
BsnI GGCC 7 cut(s) 94, 104, 108, 132, 170, 218, 419
Bsp1286I GDGCHC 1 cut(s) 39
Bsp143I GATC 3 cut(s) 198, 477, 583
BspANI GGCC 7 cut(s) 94, 104, 108, 132, 170, 218, 419
BspCNI CTCAG 1 cut(s) 255
BspFNI CGCG 2 cut(s) 90, 153
BspLI GGNNCC 2 cut(s) 15, 405
BspPI GGATC 1 cut(s) 193
BsrDI GCAATG 1 cut(s) 610
BsrFI RCCGGY 2 cut(s) 94, 104
BsrI ACTGG 1 cut(s) 208
BssAI RCCGGY 2 cut(s) 94, 104
BssECI CCNNGG 5 cut(s) 9, 88, 165, 269, 420
BssMI GATC 3 cut(s) 198, 477, 583
Bst2UI CCWGG 2 cut(s) 166, 421
BstBAI YACGTR 1 cut(s) 139
BstC8I GCNNGC 6 cut(s) 92, 106, 110, 144, 187, 447
BstDEI CTNAG 1 cut(s) 242
BstDSI CCRYGG 2 cut(s) 88, 269
BstFNI CGCG 2 cut(s) 90, 153
BstH2I RGCGCY 1 cut(s) 302
BstHHI GCGC 3 cut(s) 239, 248, 301
BstKTI GATC 3 cut(s) 201, 480, 586
BstMAI GTCTC 3 cut(s) 332, 384, 602
BstMBI GATC 3 cut(s) 198, 477, 583
BstMCI CGRYCG 1 cut(s) 70
BstMWI GCNNNNNNNGC 7 cut(s) 91, 182, 243, 245, 252, 274, 298
BstNI CCWGG 2 cut(s) 166, 421
BstSCI CCNGG 5 cut(s) 9, 99, 164, 218, 419
BstSFI CTRYAG 1 cut(s) 178
BstUI CGCG 2 cut(s) 90, 153
BstV1I GCAGC 1 cut(s) 17
BstX2I RGATCY 1 cut(s) 198
BstYI RGATCY 1 cut(s) 198
BsuRI GGCC 7 cut(s) 94, 104, 108, 132, 170, 218, 419
BtgI CCRYGG 2 cut(s) 88, 269
BtsIMutI CAGTG 1 cut(s) 215
Cac8I GCNNGC 6 cut(s) 92, 106, 110, 144, 187, 447
CfoI GCGC 3 cut(s) 239, 248, 301
Cfr10I RCCGGY 2 cut(s) 94, 104
Cfr13I GGNCC 6 cut(s) 92, 97, 102, 107, 131, 168
Cfr42I CCGCGG 1 cut(s) 91
CpoI CGGWCCG 1 cut(s) 97
Csp6I GTAC 2 cut(s) 136, 492
CspI CGGWCCG 1 cut(s) 97
CviAII CATG 1 cut(s) 495
CviQI GTAC 2 cut(s) 136, 492
DdeI CTNAG 1 cut(s) 242
DpnI GATC 3 cut(s) 200, 479, 585
DpnII GATC 3 cut(s) 198, 477, 583
DrdI GACNNNNNNGTC 1 cut(s) 74
DriI GACNNNNNGTC 1 cut(s) 124
DseDI GACNNNNNNGTC 1 cut(s) 74
Eam1105I GACNNNNNGTC 1 cut(s) 124
EciI GGCGGA 3 cut(s) 31, 335, 464
Ecl136II GAGCTC 1 cut(s) 37
Eco24I GRGCYC 1 cut(s) 39
Eco47I GGWCC 1 cut(s) 97
Eco53kI GAGCTC 1 cut(s) 37
EcoICRI GAGCTC 1 cut(s) 37
EcoRII CCWGG 2 cut(s) 164, 419
EcoT38I GRGCYC 1 cut(s) 39
Esp3I CGTCTC 1 cut(s) 332
FaeI CATG 1 cut(s) 498
FaiI YATR 1 cut(s) 496
FaqI GGGAC 1 cut(s) 62
FatI CATG 1 cut(s) 494
FauI CCCGC 2 cut(s) 83, 117
FbaI TGATCA 1 cut(s) 477
Fnu4HI GCNGC 3 cut(s) 6, 45, 266
FriOI GRGCYC 1 cut(s) 39
FseI GGCCGGCC 1 cut(s) 108
Fsp4HI GCNGC 3 cut(s) 6, 45, 266
GlaI GCGC 3 cut(s) 238, 247, 300
GluI GCNGC 3 cut(s) 6, 45, 266
GsaI CCCAGC 2 cut(s) 21, 469
HaeII RGCGCY 1 cut(s) 302
HaeIII GGCC 7 cut(s) 94, 104, 108, 132, 170, 218, 419
HapII CCGG 8 cut(s) 11, 95, 100, 105, 129, 219, 302, 573
HhaI GCGC 3 cut(s) 239, 248, 301
Hin1II CATG 1 cut(s) 498
Hin6I GCGC 3 cut(s) 237, 246, 299
HinP1I GCGC 3 cut(s) 237, 246, 299
HinfI GANTC 2 cut(s) 191, 228
HpaII CCGG 8 cut(s) 11, 95, 100, 105, 129, 219, 302, 573
HphI GGTGA 3 cut(s) 445, 511, 587
Hpy188I TCNGA 1 cut(s) 285
Hpy188III TCNNGA 1 cut(s) 225
Hpy99I CGWCG 3 cut(s) 32, 127, 541
HpyAV CCTTC 1 cut(s) 358
HpyCH4IV ACGT 1 cut(s) 138
HpyF10VI GCNNNNNNNGC 7 cut(s) 91, 182, 243, 245, 252, 274, 298
HpyF3I CTNAG 1 cut(s) 242
HpySE526I ACGT 1 cut(s) 138
Hsp92II CATG 1 cut(s) 498
HspAI GCGC 3 cut(s) 237, 246, 299
KroI GCCGGC 1 cut(s) 104
KroNI GCCGGC 1 cut(s) 106
Ksp22I TGATCA 1 cut(s) 477
KspI CCGCGG 1 cut(s) 91
Kzo9I GATC 3 cut(s) 198, 477, 583
LmnI GCTCC 3 cut(s) 34, 90, 403
Lsp1109I GCAGC 1 cut(s) 17
LweI GCATC 1 cut(s) 257
MaeII ACGT 1 cut(s) 138
MalI GATC 3 cut(s) 200, 479, 585
MboI GATC 3 cut(s) 198, 477, 583
MboII GAAGA 2 cut(s) 208, 466
MflI RGATCY 1 cut(s) 198
MhlI GDGCHC 1 cut(s) 39
MluCI AATT 2 cut(s) 520, 541
MlyI GAGTC 1 cut(s) 200
MmeI TCCRAC 1 cut(s) 495
MroNI GCCGGC 1 cut(s) 104
MspA1I CMGCKG 1 cut(s) 90
MspI CCGG 8 cut(s) 11, 95, 100, 105, 129, 219, 302, 573
MspR9I CCNGG 5 cut(s) 11, 101, 166, 220, 421
Mva1269I GAATGC 1 cut(s) 146
MvaI CCWGG 2 cut(s) 166, 421
MvnI CGCG 2 cut(s) 90, 153
MwoI GCNNNNNNNGC 7 cut(s) 91, 182, 243, 245, 252, 274, 298
NaeI GCCGGC 1 cut(s) 106
NciI CCSGG 3 cut(s) 11, 101, 220
NdeII GATC 3 cut(s) 198, 477, 583
NgoMIV GCCGGC 1 cut(s) 104
NlaIII CATG 1 cut(s) 498
NlaIV GGNNCC 2 cut(s) 15, 405
PcsI WCGNNNNNNNCGW 2 cut(s) 72, 131
PctI GAATGC 1 cut(s) 146
PdiI GCCGGC 1 cut(s) 106
PfeI GAWTC 1 cut(s) 228
Pfl23II CGTACG 1 cut(s) 135
PkrI GCNGC 3 cut(s) 7, 46, 267
PleI GAGTC 1 cut(s) 199
PpsI GAGTC 1 cut(s) 199
Ppu21I YACGTR 1 cut(s) 139
Psp124BI GAGCTC 1 cut(s) 39
Psp6I CCWGG 2 cut(s) 164, 419
PspFI CCCAGC 2 cut(s) 17, 465
PspGI CCWGG 2 cut(s) 164, 419
PspLI CGTACG 1 cut(s) 135
PspN4I GGNNCC 2 cut(s) 15, 405
PspPI GGNCC 6 cut(s) 92, 97, 102, 107, 131, 168
PsuI RGATCY 1 cut(s) 198
RigI GGCCGGCC 1 cut(s) 108
RsaI GTAC 2 cut(s) 137, 493
RsaNI GTAC 2 cut(s) 136, 492
Rsr2I CGGWCCG 1 cut(s) 97
RsrII CGGWCCG 1 cut(s) 97
SacI GAGCTC 1 cut(s) 39
SacII CCGCGG 1 cut(s) 91
SatI GCNGC 3 cut(s) 6, 45, 266
Sau3AI GATC 3 cut(s) 198, 477, 583
Sau96I GGNCC 6 cut(s) 92, 97, 102, 107, 131, 168
SchI GAGTC 1 cut(s) 200
ScrFI CCNGG 5 cut(s) 11, 101, 166, 220, 421
SduI GDGCHC 1 cut(s) 39
SetI ASST 6 cut(s) 39, 141, 167, 561, 582, 598
SfaNI GCATC 1 cut(s) 257
SfcI CTRYAG 1 cut(s) 178
Sfr303I CCGCGG 1 cut(s) 91
SgrBI CCGCGG 1 cut(s) 91
SinI GGWCC 1 cut(s) 97
Sse9I AATT 2 cut(s) 520, 541
SstI GAGCTC 1 cut(s) 39
StyD4I CCNGG 5 cut(s) 9, 99, 164, 218, 419
TaiI ACGT 1 cut(s) 141
TaqI TCGA 5 cut(s) 27, 66, 194, 224, 251
TasI AATT 2 cut(s) 520, 541
TatI WGTACW 1 cut(s) 491
TauI GCSGC 2 cut(s) 47, 268
TfiI GAWTC 1 cut(s) 228
TscAI CASTG 1 cut(s) 215
TseI GCWGC 1 cut(s) 5
TspGWI ACGGA 1 cut(s) 356
TspRI CASTG 1 cut(s) 215
VpaK11BI GGWCC 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.