G-quadruplex DNA unwinding
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Helitron_like_N | PF14214 | 300 - 464 | 7.9e-46 | Helitron helicase-like domain at N-terminus |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 261 |
| Acc36I | ACCTGC | 1 cut(s) | 1382 |
| AccI | GTMKAC | 1 cut(s) | 1195 |
| AclWI | GGATC | 5 cut(s) | 22, 203, 328, 379, 461 |
| AcoI | YGGCCR | 1 cut(s) | 1247 |
| AcsI | RAATTY | 5 cut(s) | 701, 912, 1039, 1053, 1421 |
| AfaI | GTAC | 1 cut(s) | 419 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 389 |
| AjnI | CCWGG | 1 cut(s) | 1279 |
| AluBI | AGCT | 3 cut(s) | 27, 1085, 1134 |
| AluI | AGCT | 3 cut(s) | 27, 1085, 1134 |
| AlwI | GGATC | 5 cut(s) | 22, 203, 328, 379, 461 |
| AoxI | GGCC | 2 cut(s) | 1247, 1301 |
| ApoI | RAATTY | 5 cut(s) | 701, 912, 1039, 1053, 1421 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 767, 799 |
| AseI | ATTAAT | 1 cut(s) | 1092 |
| AspLEI | GCGC | 1 cut(s) | 74 |
| AspS9I | GGNCC | 1 cut(s) | 326 |
| AsuHPI | GGTGA | 4 cut(s) | 53, 404, 701, 827 |
| AvaII | GGWCC | 1 cut(s) | 326 |
| BalI | TGGCCA | 1 cut(s) | 1249 |
| BanII | GRGCYC | 1 cut(s) | 1374 |
| BccI | CCATC | 3 cut(s) | 383, 815, 1091 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 971, 1005 |
| BciT130I | CCWGG | 1 cut(s) | 1281 |
| BclI | TGATCA | 1 cut(s) | 301 |
| BfaI | CTAG | 3 cut(s) | 567, 1109, 1152 |
| BfmI | CTRYAG | 1 cut(s) | 1074 |
| BfuAI | ACCTGC | 1 cut(s) | 1382 |
| Bme1390I | CCNGG | 1 cut(s) | 1281 |
| Bme18I | GGWCC | 1 cut(s) | 326 |
| BmgT120I | GGNCC | 1 cut(s) | 326 |
| BmrFI | CCNGG | 1 cut(s) | 1281 |
| BmsI | GCATC | 2 cut(s) | 367, 1168 |
| BpmI | CTGGAG | 1 cut(s) | 1386 |
| Bsa29I | ATCGAT | 1 cut(s) | 17 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 389 |
| Bse1I | ACTGG | 3 cut(s) | 322, 1022, 1147 |
| Bse3DI | GCAATG | 1 cut(s) | 1243 |
| BseBI | CCWGG | 1 cut(s) | 1281 |
| BseCI | ATCGAT | 1 cut(s) | 17 |
| BseGI | GGATG | 2 cut(s) | 769, 1289 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 389 |
| BseMI | GCAATG | 1 cut(s) | 1243 |
| BseNI | ACTGG | 3 cut(s) | 322, 1022, 1147 |
| BshFI | GGCC | 2 cut(s) | 1249, 1303 |
| BshVI | ATCGAT | 1 cut(s) | 17 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 389 |
| BsnI | GGCC | 2 cut(s) | 1249, 1303 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1374 |
| Bsp1407I | TGTACA | 1 cut(s) | 417 |
| Bsp143I | GATC | 7 cut(s) | 14, 208, 301, 320, 371, 466, 1006 |
| BspANI | GGCC | 2 cut(s) | 1249, 1303 |
| BspDI | ATCGAT | 1 cut(s) | 17 |
| BspMAI | CTGCAG | 1 cut(s) | 1078 |
| BspMI | ACCTGC | 1 cut(s) | 1382 |
| BspPI | GGATC | 5 cut(s) | 22, 203, 328, 379, 461 |
| BsrDI | GCAATG | 1 cut(s) | 1243 |
| BsrGI | TGTACA | 1 cut(s) | 417 |
| BsrI | ACTGG | 3 cut(s) | 322, 1022, 1147 |
| BssMI | GATC | 7 cut(s) | 14, 208, 301, 320, 371, 466, 1006 |
| Bst2UI | CCWGG | 1 cut(s) | 1281 |
| BstAUI | TGTACA | 1 cut(s) | 417 |
| BstF5I | GGATG | 2 cut(s) | 769, 1289 |
| BstHHI | GCGC | 1 cut(s) | 74 |
| BstKTI | GATC | 7 cut(s) | 17, 211, 304, 323, 374, 469, 1009 |
| BstMBI | GATC | 7 cut(s) | 14, 208, 301, 320, 371, 466, 1006 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1082 |
| BstNI | CCWGG | 1 cut(s) | 1281 |
| BstNSI | RCATGY | 2 cut(s) | 60, 78 |
| BstSCI | CCNGG | 1 cut(s) | 1279 |
| BstSFI | CTRYAG | 1 cut(s) | 1074 |
| BstX2I | RGATCY | 2 cut(s) | 208, 371 |
| BstYI | RGATCY | 2 cut(s) | 208, 371 |
| Bsu15I | ATCGAT | 1 cut(s) | 17 |
| BsuRI | GGCC | 2 cut(s) | 1249, 1303 |
| BsuTUI | ATCGAT | 1 cut(s) | 17 |
| BtsCI | GGATG | 2 cut(s) | 769, 1289 |
| BtsI | GCAGTG | 1 cut(s) | 1071 |
| BtsIMutI | CAGTG | 1 cut(s) | 1071 |
| BveI | ACCTGC | 1 cut(s) | 1382 |
| CfoI | GCGC | 1 cut(s) | 74 |
| Cfr13I | GGNCC | 1 cut(s) | 326 |
| ClaI | ATCGAT | 1 cut(s) | 17 |
| Csp6I | GTAC | 1 cut(s) | 418 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 49, 84 |
| CviAII | CATG | 7 cut(s) | 57, 75, 305, 476, 587, 1159, 1345 |
| CviJI | RGCY | 8 cut(s) | 27, 566, 678, 1085, 1134, 1249, 1303, 1372 |
| CviKI_1 | RGCY | 8 cut(s) | 27, 566, 678, 1085, 1134, 1249, 1303, 1372 |
| CviQI | GTAC | 1 cut(s) | 418 |
| DpnI | GATC | 7 cut(s) | 16, 210, 303, 322, 373, 468, 1008 |
| DpnII | GATC | 7 cut(s) | 14, 208, 301, 320, 371, 466, 1006 |
| DraI | TTTAAA | 3 cut(s) | 241, 340, 1327 |
| EaeI | YGGCCR | 1 cut(s) | 1247 |
| Eco147I | AGGCCT | 1 cut(s) | 1303 |
| Eco24I | GRGCYC | 1 cut(s) | 1374 |
| Eco47I | GGWCC | 1 cut(s) | 326 |
| EcoO109I | RGGNCCY | 1 cut(s) | 326 |
| EcoRII | CCWGG | 1 cut(s) | 1279 |
| EcoT38I | GRGCYC | 1 cut(s) | 1374 |
| FaeI | CATG | 7 cut(s) | 60, 78, 308, 479, 590, 1162, 1348 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 147, 179 |
| FatI | CATG | 7 cut(s) | 56, 74, 304, 475, 586, 1158, 1344 |
| FauNDI | CATATG | 1 cut(s) | 811 |
| FbaI | TGATCA | 1 cut(s) | 301 |
| FblI | GTMKAC | 1 cut(s) | 1195 |
| FokI | GGATG | 2 cut(s) | 756, 1296 |
| FriOI | GRGCYC | 1 cut(s) | 1374 |
| FspBI | CTAG | 3 cut(s) | 567, 1109, 1152 |
| GlaI | GCGC | 1 cut(s) | 73 |
| GsuI | CTGGAG | 1 cut(s) | 1386 |
| HaeIII | GGCC | 2 cut(s) | 1249, 1303 |
| HhaI | GCGC | 1 cut(s) | 74 |
| Hin1II | CATG | 7 cut(s) | 60, 78, 308, 479, 590, 1162, 1348 |
| Hin6I | GCGC | 1 cut(s) | 72 |
| HinP1I | GCGC | 1 cut(s) | 72 |
| HinfI | GANTC | 2 cut(s) | 731, 983 |
| HphI | GGTGA | 4 cut(s) | 53, 404, 701, 827 |
| Hpy166II | GTNNAC | 3 cut(s) | 956, 1196, 1289 |
| Hpy188I | TCNGA | 3 cut(s) | 88, 388, 1046 |
| Hpy188III | TCNNGA | 6 cut(s) | 111, 224, 917, 1175, 1211, 1365 |
| Hpy8I | GTNNAC | 3 cut(s) | 956, 1196, 1289 |
| Hpy99I | CGWCG | 1 cut(s) | 756 |
| HpyAV | CCTTC | 2 cut(s) | 393, 606 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1082 |
| Hsp92II | CATG | 7 cut(s) | 60, 78, 308, 479, 590, 1162, 1348 |
| HspAI | GCGC | 1 cut(s) | 72 |
| Ksp22I | TGATCA | 1 cut(s) | 301 |
| Kzo9I | GATC | 7 cut(s) | 14, 208, 301, 320, 371, 466, 1006 |
| LmnI | GCTCC | 1 cut(s) | 290 |
| LweI | GCATC | 2 cut(s) | 367, 1168 |
| MaeI | CTAG | 3 cut(s) | 567, 1109, 1152 |
| MaeIII | GTNAC | 2 cut(s) | 41, 689 |
| MalI | GATC | 7 cut(s) | 16, 210, 303, 322, 373, 468, 1008 |
| MboI | GATC | 7 cut(s) | 14, 208, 301, 320, 371, 466, 1006 |
| MboII | GAAGA | 9 cut(s) | 101, 185, 662, 677, 756, 830, 944, 1013, 1016 |
| MfeI | CAATTG | 3 cut(s) | 6, 297, 413 |
| MflI | RGATCY | 2 cut(s) | 208, 371 |
| MhlI | GDGCHC | 1 cut(s) | 1374 |
| MlsI | TGGCCA | 1 cut(s) | 1249 |
| MluNI | TGGCCA | 1 cut(s) | 1249 |
| MmeI | TCCRAC | 2 cut(s) | 66, 203 |
| MnlI | CCTC | 1 cut(s) | 1288 |
| Mox20I | TGGCCA | 1 cut(s) | 1249 |
| MscI | TGGCCA | 1 cut(s) | 1249 |
| MslI | CAYNNNNRTG | 1 cut(s) | 284 |
| Msp20I | TGGCCA | 1 cut(s) | 1249 |
| MspA1I | CMGCKG | 1 cut(s) | 1085 |
| MspR9I | CCNGG | 1 cut(s) | 1281 |
| MunI | CAATTG | 3 cut(s) | 6, 297, 413 |
| MvaI | CCWGG | 1 cut(s) | 1281 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1082 |
| NdeI | CATATG | 1 cut(s) | 811 |
| NdeII | GATC | 7 cut(s) | 14, 208, 301, 320, 371, 466, 1006 |
| NlaIII | CATG | 7 cut(s) | 60, 78, 308, 479, 590, 1162, 1348 |
| NmuCI | GTSAC | 2 cut(s) | 41, 689 |
| NspI | RCATGY | 2 cut(s) | 60, 78 |
| PceI | AGGCCT | 1 cut(s) | 1303 |
| PfeI | GAWTC | 2 cut(s) | 731, 983 |
| PpuMI | RGGWCCY | 1 cut(s) | 326 |
| PshBI | ATTAAT | 1 cut(s) | 1092 |
| PsiI | TTATAA | 1 cut(s) | 261 |
| Psp5II | RGGWCCY | 1 cut(s) | 326 |
| Psp6I | CCWGG | 1 cut(s) | 1279 |
| PspGI | CCWGG | 1 cut(s) | 1279 |
| PspPI | GGNCC | 1 cut(s) | 326 |
| PspPPI | RGGWCCY | 1 cut(s) | 326 |
| PstI | CTGCAG | 1 cut(s) | 1078 |
| PsuI | RGATCY | 2 cut(s) | 208, 371 |
| PvuII | CAGCTG | 1 cut(s) | 1085 |
| RsaI | GTAC | 1 cut(s) | 419 |
| RsaNI | GTAC | 1 cut(s) | 418 |
| RseI | CAYNNNNRTG | 1 cut(s) | 284 |
| Sau3AI | GATC | 7 cut(s) | 14, 208, 301, 320, 371, 466, 1006 |
| Sau96I | GGNCC | 1 cut(s) | 326 |
| ScrFI | CCNGG | 1 cut(s) | 1281 |
| SduI | GDGCHC | 1 cut(s) | 1374 |
| SetI | ASST | 8 cut(s) | 29, 328, 835, 955, 1087, 1136, 1282, 1396 |
| SfaNI | GCATC | 2 cut(s) | 367, 1168 |
| SfcI | CTRYAG | 1 cut(s) | 1074 |
| SinI | GGWCC | 1 cut(s) | 326 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 284 |
| SseBI | AGGCCT | 1 cut(s) | 1303 |
| SspI | AATATT | 3 cut(s) | 250, 490, 1257 |
| SspMI | CTAG | 3 cut(s) | 567, 1109, 1152 |
| StuI | AGGCCT | 1 cut(s) | 1303 |
| StyD4I | CCNGG | 1 cut(s) | 1279 |
| TaqI | TCGA | 3 cut(s) | 17, 559, 981 |
| TatI | WGTACW | 1 cut(s) | 417 |
| TfiI | GAWTC | 2 cut(s) | 731, 983 |
| TscAI | CASTG | 1 cut(s) | 1078 |
| TseFI | GTSAC | 2 cut(s) | 41, 689 |
| Tsp45I | GTSAC | 2 cut(s) | 41, 689 |
| TspDTI | ATGAA | 7 cut(s) | 453, 546, 588, 594, 663, 945, 1346 |
| TspGWI | ACGGA | 2 cut(s) | 756, 769 |
| TspRI | CASTG | 1 cut(s) | 1078 |
| VpaK11BI | GGWCC | 1 cut(s) | 326 |
| VspI | ATTAAT | 1 cut(s) | 1092 |
| XapI | RAATTY | 5 cut(s) | 701, 912, 1039, 1053, 1421 |
| XceI | RCATGY | 2 cut(s) | 60, 78 |
| XmiI | GTMKAC | 1 cut(s) | 1195 |
| XspI | CTAG | 3 cut(s) | 567, 1109, 1152 |