Helitron helicase-like domain at N-terminus
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Helitron_like_N | PF14214 | 232 - 331 | 1.2e-35 | Helitron helicase-like domain at N-terminus |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1193 |
| AccBSI | CCGCTC | 1 cut(s) | 650 |
| AciI | CCGC | 5 cut(s) | 303, 489, 632, 650, 1039 |
| AclWI | GGATC | 1 cut(s) | 207 |
| AcsI | RAATTY | 1 cut(s) | 953 |
| AcuI | CTGAAG | 2 cut(s) | 156, 1047 |
| AfaI | GTAC | 2 cut(s) | 274, 981 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 340, 506, 796 |
| AflIII | ACRYGT | 2 cut(s) | 782, 976 |
| AgsI | TTSAA | 7 cut(s) | 9, 398, 746, 876, 884, 953, 1237 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 147 |
| AjnI | CCWGG | 1 cut(s) | 823 |
| AleI | CACNNNNGTG | 1 cut(s) | 1165 |
| AluBI | AGCT | 5 cut(s) | 14, 47, 817, 1015, 1052 |
| AluI | AGCT | 5 cut(s) | 14, 47, 817, 1015, 1052 |
| Alw21I | GWGCWC | 3 cut(s) | 16, 60, 463 |
| Alw26I | GTCTC | 1 cut(s) | 102 |
| Alw44I | GTGCAC | 1 cut(s) | 56 |
| AlwI | GGATC | 1 cut(s) | 207 |
| AoxI | GGCC | 1 cut(s) | 490 |
| ApaLI | GTGCAC | 1 cut(s) | 56 |
| ApoI | RAATTY | 1 cut(s) | 953 |
| AspS9I | GGNCC | 2 cut(s) | 1118, 1127 |
| AsuHPI | GGTGA | 2 cut(s) | 146, 277 |
| AvaII | GGWCC | 2 cut(s) | 1118, 1127 |
| BaeGI | GKGCMC | 1 cut(s) | 60 |
| BanII | GRGCYC | 1 cut(s) | 16 |
| BbsI | GAAGAC | 2 cut(s) | 903, 1137 |
| Bbv12I | GWGCWC | 3 cut(s) | 16, 60, 463 |
| BccI | CCATC | 5 cut(s) | 25, 622, 727, 1158, 1172 |
| BceAI | ACGGC | 1 cut(s) | 423 |
| BciT130I | CCWGG | 1 cut(s) | 825 |
| BcoDI | GTCTC | 1 cut(s) | 102 |
| BfaI | CTAG | 1 cut(s) | 672 |
| BisI | GCNGC | 2 cut(s) | 490, 633 |
| BlsI | GCNGC | 2 cut(s) | 491, 634 |
| Bme1390I | CCNGG | 1 cut(s) | 825 |
| Bme18I | GGWCC | 2 cut(s) | 1118, 1127 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 147 |
| BmgT120I | GGNCC | 2 cut(s) | 1118, 1127 |
| BmrFI | CCNGG | 1 cut(s) | 825 |
| BmsI | GCATC | 2 cut(s) | 629, 718 |
| BpiI | GAAGAC | 2 cut(s) | 903, 1137 |
| BpuEI | CTTGAG | 1 cut(s) | 447 |
| BsaJI | CCNNGG | 3 cut(s) | 439, 823, 1198 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 340, 506, 796 |
| Bse3DI | GCAATG | 1 cut(s) | 415 |
| BseBI | CCWGG | 1 cut(s) | 825 |
| BseDI | CCNNGG | 3 cut(s) | 439, 823, 1198 |
| BseGI | GGATG | 2 cut(s) | 733, 1006 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 340, 506, 796 |
| BseMI | GCAATG | 1 cut(s) | 415 |
| BseSI | GKGCMC | 1 cut(s) | 60 |
| BsgI | GTGCAG | 1 cut(s) | 265 |
| BshFI | GGCC | 1 cut(s) | 492 |
| BsiHKAI | GWGCWC | 3 cut(s) | 16, 60, 463 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 340, 506, 796 |
| BsmAI | GTCTC | 1 cut(s) | 102 |
| BsmBI | CGTCTC | 1 cut(s) | 102 |
| BsmI | GAATGC | 1 cut(s) | 388 |
| BsnI | GGCC | 1 cut(s) | 492 |
| Bsp1286I | GDGCHC | 3 cut(s) | 16, 60, 463 |
| Bsp1407I | TGTACA | 1 cut(s) | 979 |
| Bsp143I | GATC | 3 cut(s) | 199, 841, 1090 |
| Bsp19I | CCATGG | 1 cut(s) | 1198 |
| BspACI | CCGC | 5 cut(s) | 303, 489, 632, 650, 1039 |
| BspANI | GGCC | 1 cut(s) | 492 |
| BspHI | TCATGA | 1 cut(s) | 193 |
| BspPI | GGATC | 1 cut(s) | 207 |
| BspQI | GCTCTTC | 1 cut(s) | 1068 |
| BsrBI | CCGCTC | 1 cut(s) | 650 |
| BsrDI | GCAATG | 1 cut(s) | 415 |
| BsrGI | TGTACA | 1 cut(s) | 979 |
| BssECI | CCNNGG | 3 cut(s) | 439, 823, 1198 |
| BssMI | GATC | 3 cut(s) | 199, 841, 1090 |
| BssT1I | CCWWGG | 1 cut(s) | 1198 |
| Bst2UI | CCWGG | 1 cut(s) | 825 |
| Bst4CI | ACNGT | 7 cut(s) | 55, 78, 176, 265, 603, 1143, 1214 |
| Bst6I | CTCTTC | 2 cut(s) | 919, 1068 |
| BstAUI | TGTACA | 1 cut(s) | 979 |
| BstC8I | GCNNGC | 1 cut(s) | 652 |
| BstDSI | CCRYGG | 2 cut(s) | 439, 1198 |
| BstF5I | GGATG | 2 cut(s) | 733, 1006 |
| BstKTI | GATC | 3 cut(s) | 202, 844, 1093 |
| BstMAI | GTCTC | 1 cut(s) | 102 |
| BstMBI | GATC | 3 cut(s) | 199, 841, 1090 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 64, 994 |
| BstNI | CCWGG | 1 cut(s) | 825 |
| BstNSI | RCATGY | 2 cut(s) | 786, 980 |
| BstSCI | CCNGG | 1 cut(s) | 823 |
| BstSLI | GKGCMC | 1 cut(s) | 60 |
| BstV2I | GAAGAC | 2 cut(s) | 903, 1137 |
| BsuRI | GGCC | 1 cut(s) | 492 |
| BtgI | CCRYGG | 2 cut(s) | 439, 1198 |
| BtgZI | GCGATG | 2 cut(s) | 149, 746 |
| BtsCI | GGATG | 2 cut(s) | 733, 1006 |
| BtsIMutI | CAGTG | 2 cut(s) | 60, 181 |
| Cac8I | GCNNGC | 1 cut(s) | 652 |
| CciI | TCATGA | 1 cut(s) | 193 |
| Cfr13I | GGNCC | 2 cut(s) | 1118, 1127 |
| CseI | GACGC | 2 cut(s) | 73, 84 |
| Csp6I | GTAC | 2 cut(s) | 273, 980 |
| CviQI | GTAC | 2 cut(s) | 273, 980 |
| DpnI | GATC | 3 cut(s) | 201, 843, 1092 |
| DpnII | GATC | 3 cut(s) | 199, 841, 1090 |
| DraI | TTTAAA | 1 cut(s) | 1134 |
| DriI | GACNNNNNGTC | 1 cut(s) | 147 |
| Eam1104I | CTCTTC | 2 cut(s) | 919, 1068 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 147 |
| EarI | CTCTTC | 2 cut(s) | 919, 1068 |
| Ecl136II | GAGCTC | 1 cut(s) | 14 |
| Eco130I | CCWWGG | 1 cut(s) | 1198 |
| Eco24I | GRGCYC | 1 cut(s) | 16 |
| Eco47I | GGWCC | 2 cut(s) | 1118, 1127 |
| Eco53kI | GAGCTC | 1 cut(s) | 14 |
| Eco57I | CTGAAG | 2 cut(s) | 156, 1047 |
| EcoICRI | GAGCTC | 1 cut(s) | 14 |
| EcoRII | CCWGG | 1 cut(s) | 823 |
| EcoT14I | CCWWGG | 1 cut(s) | 1198 |
| EcoT38I | GRGCYC | 1 cut(s) | 16 |
| ErhI | CCWWGG | 1 cut(s) | 1198 |
| Esp3I | CGTCTC | 1 cut(s) | 102 |
| FauI | CCCGC | 1 cut(s) | 643 |
| FauNDI | CATATG | 1 cut(s) | 984 |
| Fnu4HI | GCNGC | 2 cut(s) | 490, 633 |
| FokI | GGATG | 2 cut(s) | 740, 1013 |
| FriOI | GRGCYC | 1 cut(s) | 16 |
| Fsp4HI | GCNGC | 2 cut(s) | 490, 633 |
| FspBI | CTAG | 1 cut(s) | 672 |
| GluI | GCNGC | 2 cut(s) | 490, 633 |
| HaeIII | GGCC | 1 cut(s) | 492 |
| HgaI | GACGC | 2 cut(s) | 73, 84 |
| HindIII | AAGCTT | 1 cut(s) | 1013 |
| HinfI | GANTC | 6 cut(s) | 148, 238, 419, 705, 722, 1111 |
| HphI | GGTGA | 2 cut(s) | 146, 277 |
| Hpy166II | GTNNAC | 5 cut(s) | 58, 611, 701, 1127, 1158 |
| Hpy188I | TCNGA | 5 cut(s) | 355, 367, 577, 727, 960 |
| Hpy188III | TCNNGA | 7 cut(s) | 9, 99, 194, 203, 688, 709, 848 |
| Hpy8I | GTNNAC | 5 cut(s) | 58, 611, 701, 1127, 1158 |
| Hpy99I | CGWCG | 1 cut(s) | 67 |
| HpyAV | CCTTC | 2 cut(s) | 314, 500 |
| HpyCH4III | ACNGT | 7 cut(s) | 55, 78, 176, 265, 603, 1143, 1214 |
| HpyCH4V | TGCA | 7 cut(s) | 58, 246, 388, 408, 512, 584, 620 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 64, 994 |
| Kzo9I | GATC | 3 cut(s) | 199, 841, 1090 |
| LguI | GCTCTTC | 1 cut(s) | 1068 |
| LmnI | GCTCC | 2 cut(s) | 19, 647 |
| LweI | GCATC | 2 cut(s) | 629, 718 |
| MaeI | CTAG | 1 cut(s) | 672 |
| MaeIII | GTNAC | 4 cut(s) | 115, 139, 785, 1208 |
| MalI | GATC | 3 cut(s) | 201, 843, 1092 |
| MbiI | CCGCTC | 1 cut(s) | 650 |
| MboI | GATC | 3 cut(s) | 199, 841, 1090 |
| MboII | GAAGA | 6 cut(s) | 812, 908, 936, 1040, 1085, 1137 |
| MfeI | CAATTG | 1 cut(s) | 285 |
| MhlI | GDGCHC | 3 cut(s) | 16, 60, 463 |
| MluCI | AATT | 7 cut(s) | 124, 285, 292, 693, 793, 804, 953 |
| MlyI | GAGTC | 3 cut(s) | 157, 699, 716 |
| MmeI | TCCRAC | 1 cut(s) | 184 |
| MnlI | CCTC | 6 cut(s) | 167, 190, 261, 590, 850, 1089 |
| MseI | TTAA | 6 cut(s) | 258, 426, 680, 807, 1017, 1133 |
| MslI | CAYNNNNRTG | 4 cut(s) | 397, 1153, 1165, 1229 |
| MspR9I | CCNGG | 1 cut(s) | 825 |
| MunI | CAATTG | 1 cut(s) | 285 |
| Mva1269I | GAATGC | 1 cut(s) | 388 |
| MvaI | CCWGG | 1 cut(s) | 825 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 64, 994 |
| NcoI | CCATGG | 1 cut(s) | 1198 |
| NdeI | CATATG | 1 cut(s) | 984 |
| NdeII | GATC | 3 cut(s) | 199, 841, 1090 |
| NmuCI | GTSAC | 2 cut(s) | 115, 139 |
| NspI | RCATGY | 2 cut(s) | 786, 980 |
| OliI | CACNNNNGTG | 1 cut(s) | 1165 |
| PagI | TCATGA | 1 cut(s) | 193 |
| PciI | ACATGT | 2 cut(s) | 782, 976 |
| PciSI | GCTCTTC | 1 cut(s) | 1068 |
| PctI | GAATGC | 1 cut(s) | 388 |
| PfeI | GAWTC | 3 cut(s) | 238, 419, 1111 |
| PkrI | GCNGC | 2 cut(s) | 491, 634 |
| PleI | GAGTC | 3 cut(s) | 156, 699, 716 |
| PpsI | GAGTC | 3 cut(s) | 156, 699, 716 |
| PscI | ACATGT | 2 cut(s) | 782, 976 |
| PsiI | TTATAA | 1 cut(s) | 1193 |
| Psp124BI | GAGCTC | 1 cut(s) | 16 |
| Psp6I | CCWGG | 1 cut(s) | 823 |
| PspGI | CCWGG | 1 cut(s) | 823 |
| PspPI | GGNCC | 2 cut(s) | 1118, 1127 |
| RsaI | GTAC | 2 cut(s) | 274, 981 |
| RsaNI | GTAC | 2 cut(s) | 273, 980 |
| RseI | CAYNNNNRTG | 4 cut(s) | 397, 1153, 1165, 1229 |
| SacI | GAGCTC | 1 cut(s) | 16 |
| SapI | GCTCTTC | 1 cut(s) | 1068 |
| SaqAI | TTAA | 6 cut(s) | 258, 426, 680, 807, 1017, 1133 |
| SatI | GCNGC | 2 cut(s) | 490, 633 |
| Sau3AI | GATC | 3 cut(s) | 199, 841, 1090 |
| Sau96I | GGNCC | 2 cut(s) | 1118, 1127 |
| SchI | GAGTC | 3 cut(s) | 157, 699, 716 |
| ScrFI | CCNGG | 1 cut(s) | 825 |
| SduI | GDGCHC | 3 cut(s) | 16, 60, 463 |
| SfaNI | GCATC | 2 cut(s) | 629, 718 |
| SinI | GGWCC | 2 cut(s) | 1118, 1127 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 397, 1153, 1165, 1229 |
| SmlI | CTYRAG | 1 cut(s) | 462 |
| SmoI | CTYRAG | 1 cut(s) | 462 |
| Sse9I | AATT | 7 cut(s) | 124, 285, 292, 693, 793, 804, 953 |
| SsiI | CCGC | 5 cut(s) | 303, 489, 632, 650, 1039 |
| SspI | AATATT | 1 cut(s) | 190 |
| SspMI | CTAG | 1 cut(s) | 672 |
| SstI | GAGCTC | 1 cut(s) | 16 |
| StyD4I | CCNGG | 1 cut(s) | 823 |
| StyI | CCWWGG | 1 cut(s) | 1198 |
| TaaI | ACNGT | 7 cut(s) | 55, 78, 176, 265, 603, 1143, 1214 |
| TaqI | TCGA | 6 cut(s) | 62, 100, 146, 345, 470, 1081 |
| TasI | AATT | 7 cut(s) | 124, 285, 292, 693, 793, 804, 953 |
| TatI | WGTACW | 1 cut(s) | 979 |
| TauI | GCSGC | 2 cut(s) | 492, 635 |
| TfiI | GAWTC | 3 cut(s) | 238, 419, 1111 |
| Tru1I | TTAA | 6 cut(s) | 258, 426, 680, 807, 1017, 1133 |
| Tru9I | TTAA | 6 cut(s) | 258, 426, 680, 807, 1017, 1133 |
| TscAI | CASTG | 2 cut(s) | 60, 181 |
| TseFI | GTSAC | 2 cut(s) | 115, 139 |
| Tsp45I | GTSAC | 2 cut(s) | 115, 139 |
| TspDTI | ATGAA | 9 cut(s) | 182, 432, 519, 570, 860, 1017, 1086, 1103, 1137 |
| TspRI | CASTG | 2 cut(s) | 60, 181 |
| VneI | GTGCAC | 1 cut(s) | 56 |
| VpaK11BI | GGWCC | 2 cut(s) | 1118, 1127 |
| XapI | RAATTY | 1 cut(s) | 953 |
| XceI | RCATGY | 2 cut(s) | 786, 980 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 695 |
| XspI | CTAG | 1 cut(s) | 672 |