Rw4G013650

Helicase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000080
Physical Location & Seq
Forward (+)
31955224 .. 31956285
1062 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G013650.1

Sequence Viewer

Length: 1062 bp
ATGATGCATAGATTTGCATTTGAAGCTCTTGATCGGACTTTTAAAGACATAATAGGTGTTGATTTGCCATTTGGGGGCAAAGTGATTATTTTTGGGGGAGATTTCCGACAAGTTCTGCCCGTTGTCCATAAGGGTACAAGGTCTCAGATGGTCCAAGCCAGTCTGGTTAACTCTTCATTTTGGAAAGATGTGAGGATTCTTCGTTTGCGGCAAAATATGAGATCTATCAATGATCCAGAGTTCTCAGAGTTTTTACTTAATGTTGGTAATGGAGAACAACCATCTGTGGTTGAAGACATGATACGATTACCGTCGTGTATGGCCATACCATGGGAGGGTGAAGAGTCAATCAACCGATTAGTTAATGAAGTTTTTCCTAATTTGGAATCTCATGTAAATGATGCAGCGTACATGGTTGAAAGGGCAATAATCACTCCAAAGAATGATGATGTTGACGTGCTTAATGAGATGATTATAAAGCAATTTCCAGGGCCTGAACGGATCCTGTACTCTTTCGACTCGGTTGAGGATGACACCAGAAATATGTATCAACAAGAATTCTTAAATTCAATTTCACCTTCTGGTATGCCCCCACATCAGTTAACTATAAAAAAAGGTGCTCCCATTATGCTTTTGAGAAATATTGACCCTACGATGGGATTGTGCAATGGTACACGATTGACTTGCCGTGGATCATATAACAACCTTATTGACGCAGAGATTTTAACTGGTCAATTTGTTGGAACTAGAGTATTCTTACCAAGAATATCTCTAAAGAGTGCCGAGAGTTCTGGACTCCCTTTTGAGATGACAAGAAAACAATTCCCTGTAAAGTTGAGTTTTGCACTTACTATAAATAAATCACAAGGGCAAACGATACCGAATGTTGGCATCTACCTTCCAGATCATGTATTCAGTCATGGGCAGTTATATGTCGCTTTATCACGAGGAATTTCAGAGGCTACCACCAAAGTGTTAGTCAAGAAAGGCTCATTTGAAGGCGAGGAAGGGGTGTTCACAACAAATGTTGTTTATAAAGAGATTTTGCTTCCAGCAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

353

Amino Acids

39.61

Weight (kDa)

5.94

Isoelectric Point (pI)

43.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PIF1 PF05970 1 - 95 2.2e-28 PIF1-like helicase
Pif1_2B_dom PF21530 186 - 228 1.3e-20 DNA helicase Pif1, 2B domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 476, 1035
AccB7I CCANNNNNTGG 1 cut(s) 330
AciI CCGC 1 cut(s) 208
AclWI GGATC 4 cut(s) 227, 496, 509, 700
AcoI YGGCCR 1 cut(s) 321
AcsI RAATTY 3 cut(s) 557, 565, 951
AfaI GTAC 4 cut(s) 136, 410, 509, 673
AfiI CCNNNNNNNGG 6 cut(s) 74, 330, 335, 655, 656, 887
AgsI TTSAA 5 cut(s) 23, 293, 419, 570, 998
AjiI CACGTC 1 cut(s) 457
AjnI CCWGG 1 cut(s) 487
AleI CACNNNNGTG 1 cut(s) 971
AloI GAACNNNNNNTCC 2 cut(s) 998, 1030
AluBI AGCT 1 cut(s) 26
AluI AGCT 1 cut(s) 26
Alw21I GWGCWC 1 cut(s) 622
Alw26I GTCTC 1 cut(s) 147
AlwI GGATC 4 cut(s) 227, 496, 509, 700
AlwNI CAGNNNCTG 1 cut(s) 494
AoxI GGCC 2 cut(s) 321, 491
ApeKI GCWGC 1 cut(s) 404
ApoI RAATTY 3 cut(s) 557, 565, 951
ArsI GACNNNNNNTTYG 2 cut(s) 963, 995
Asp700I GAANNNNTTC 1 cut(s) 372
AspS9I GGNCC 2 cut(s) 151, 491
AsuHPI GGTGA 2 cut(s) 350, 567
AvaII GGWCC 1 cut(s) 151
BalI TGGCCA 1 cut(s) 323
BamHI GGATCC 1 cut(s) 501
BarI GAAGNNNNNNTAC 2 cut(s) 285, 317
BauI CACGAG 1 cut(s) 945
BbsI GAAGAC 1 cut(s) 300
Bbv12I GWGCWC 1 cut(s) 622
BbvI GCAGC 1 cut(s) 416
BccI CCATC 3 cut(s) 142, 289, 649
BceAI ACGGC 1 cut(s) 672
BcgI CGANNNNNNTGC 2 cut(s) 666, 700
BciT130I CCWGG 1 cut(s) 489
BcoDI GTCTC 1 cut(s) 147
BfaI CTAG 1 cut(s) 747
BglII AGATCT 1 cut(s) 221
BisI GCNGC 2 cut(s) 209, 405
BlsI GCNGC 2 cut(s) 210, 406
Bme1390I CCNGG 1 cut(s) 489
Bme18I GGWCC 1 cut(s) 151
BmgBI CACGTC 1 cut(s) 457
BmgT120I GGNCC 2 cut(s) 151, 491
BmiI GGNNCC 1 cut(s) 503
BmrFI CCNGG 1 cut(s) 489
BmsI GCATC 2 cut(s) 391, 900
BpiI GAAGAC 1 cut(s) 300
BsaI GGTCTC 1 cut(s) 147
BsaJI CCNNGG 3 cut(s) 329, 488, 688
Bsc4I CCNNNNNNNGG 6 cut(s) 74, 330, 335, 655, 656, 887
Bse1I ACTGG 2 cut(s) 159, 733
Bse3DI GCAATG 1 cut(s) 673
BseBI CCWGG 1 cut(s) 489
BseDI CCNNGG 3 cut(s) 329, 488, 688
BseGI GGATG 1 cut(s) 535
BseLI CCNNNNNNNGG 6 cut(s) 74, 330, 335, 655, 656, 887
BseMI GCAATG 1 cut(s) 673
BseMII CTCAG 2 cut(s) 158, 258
BseNI ACTGG 2 cut(s) 159, 733
BseXI GCAGC 1 cut(s) 416
BshFI GGCC 2 cut(s) 323, 493
BsiHKAI GWGCWC 1 cut(s) 622
BslI CCNNNNNNNGG 6 cut(s) 74, 330, 335, 655, 656, 887
BsmAI GTCTC 1 cut(s) 147
BsnI GGCC 2 cut(s) 323, 493
Bso31I GGTCTC 1 cut(s) 147
Bsp1286I GDGCHC 1 cut(s) 622
Bsp143I GATC 6 cut(s) 31, 221, 232, 501, 692, 904
Bsp19I CCATGG 1 cut(s) 329
BspACI CCGC 1 cut(s) 208
BspANI GGCC 2 cut(s) 323, 493
BspCNI CTCAG 2 cut(s) 157, 257
BspLI GGNNCC 1 cut(s) 503
BspPI GGATC 4 cut(s) 227, 496, 509, 700
BspTNI GGTCTC 1 cut(s) 147
BsrDI GCAATG 1 cut(s) 673
BsrI ACTGG 2 cut(s) 159, 733
BssECI CCNNGG 3 cut(s) 329, 488, 688
BssMI GATC 6 cut(s) 31, 221, 232, 501, 692, 904
BssSI CACGAG 1 cut(s) 945
BssT1I CCWWGG 1 cut(s) 329
Bst2BI CACGAG 1 cut(s) 945
Bst2UI CCWGG 1 cut(s) 489
Bst4CI ACNGT 1 cut(s) 312
Bst6I CTCTTC 2 cut(s) 178, 336
BstDEI CTNAG 2 cut(s) 144, 244
BstDSI CCRYGG 2 cut(s) 329, 688
BstF5I GGATG 1 cut(s) 535
BstKTI GATC 6 cut(s) 34, 224, 235, 504, 695, 907
BstMAI GTCTC 1 cut(s) 147
BstMBI GATC 6 cut(s) 31, 221, 232, 501, 692, 904
BstMWI GCNNNNNNNGC 1 cut(s) 23
BstNI CCWGG 1 cut(s) 489
BstSCI CCNGG 1 cut(s) 487
BstV1I GCAGC 1 cut(s) 416
BstV2I GAAGAC 1 cut(s) 300
BstX2I RGATCY 2 cut(s) 221, 501
BstYI RGATCY 2 cut(s) 221, 501
BsuRI GGCC 2 cut(s) 323, 493
BtgI CCRYGG 2 cut(s) 329, 688
BtrI CACGTC 1 cut(s) 457
BtsCI GGATG 1 cut(s) 535
CaiI CAGNNNCTG 1 cut(s) 494
Cfr13I GGNCC 2 cut(s) 151, 491
CseI GACGC 1 cut(s) 722
Csp6I GTAC 4 cut(s) 135, 409, 508, 672
CviAII CATG 6 cut(s) 298, 330, 392, 412, 908, 920
CviJI RGCY 6 cut(s) 26, 158, 323, 493, 962, 990
CviKI_1 RGCY 6 cut(s) 26, 158, 323, 493, 962, 990
CviQI GTAC 4 cut(s) 135, 409, 508, 672
DdeI CTNAG 2 cut(s) 144, 244
DpnI GATC 6 cut(s) 33, 223, 234, 503, 694, 906
DpnII GATC 6 cut(s) 31, 221, 232, 501, 692, 904
DraI TTTAAA 1 cut(s) 43
EaeI YGGCCR 1 cut(s) 321
Eam1104I CTCTTC 2 cut(s) 178, 336
EarI CTCTTC 2 cut(s) 178, 336
Eco130I CCWWGG 1 cut(s) 329
Eco31I GGTCTC 1 cut(s) 147
Eco47I GGWCC 1 cut(s) 151
EcoO109I RGGNCCY 1 cut(s) 491
EcoRI GAATTC 1 cut(s) 557
EcoRII CCWGG 1 cut(s) 487
EcoT14I CCWWGG 1 cut(s) 329
EcoT22I ATGCAT 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 329
FaeI CATG 6 cut(s) 301, 333, 395, 415, 911, 923
FatI CATG 6 cut(s) 297, 329, 391, 411, 907, 919
Fnu4HI GCNGC 2 cut(s) 209, 405
FokI GGATG 1 cut(s) 542
Fsp4HI GCNGC 2 cut(s) 209, 405
FspBI CTAG 1 cut(s) 747
GluI GCNGC 2 cut(s) 209, 405
HaeIII GGCC 2 cut(s) 323, 493
HgaI GACGC 1 cut(s) 722
Hin1II CATG 6 cut(s) 301, 333, 395, 415, 911, 923
HincII GTYRAC 3 cut(s) 169, 454, 603
HindII GTYRAC 3 cut(s) 169, 454, 603
HinfI GANTC 5 cut(s) 196, 344, 386, 518, 795
HpaI GTTAAC 2 cut(s) 169, 603
HphI GGTGA 2 cut(s) 350, 567
Hpy166II GTNNAC 5 cut(s) 169, 454, 603, 674, 1017
Hpy188I TCNGA 5 cut(s) 36, 107, 147, 247, 958
Hpy188III TCNNGA 6 cut(s) 29, 236, 792, 902, 945, 982
Hpy8I GTNNAC 5 cut(s) 169, 454, 603, 674, 1017
Hpy99I CGWCG 1 cut(s) 316
HpyAV CCTTC 4 cut(s) 588, 908, 992, 1001
HpyCH4III ACNGT 1 cut(s) 312
HpyCH4IV ACGT 1 cut(s) 456
HpyCH4V TGCA 5 cut(s) 7, 17, 404, 666, 845
HpyF10VI GCNNNNNNNGC 1 cut(s) 23
HpyF3I CTNAG 2 cut(s) 144, 244
HpySE526I ACGT 1 cut(s) 456
Hsp92II CATG 6 cut(s) 301, 333, 395, 415, 911, 923
KspAI GTTAAC 2 cut(s) 169, 603
Kzo9I GATC 6 cut(s) 31, 221, 232, 501, 692, 904
LmnI GCTCC 1 cut(s) 625
Lsp1109I GCAGC 1 cut(s) 416
LweI GCATC 2 cut(s) 391, 900
MaeI CTAG 1 cut(s) 747
MaeII ACGT 1 cut(s) 456
MalI GATC 6 cut(s) 33, 223, 234, 503, 694, 906
MboI GATC 6 cut(s) 31, 221, 232, 501, 692, 904
MboII GAAGA 4 cut(s) 165, 191, 305, 353
MflI RGATCY 2 cut(s) 221, 501
MhlI GDGCHC 1 cut(s) 622
MlsI TGGCCA 1 cut(s) 323
MluCI AATT 8 cut(s) 379, 482, 557, 565, 570, 734, 821, 951
MluNI TGGCCA 1 cut(s) 323
MlyI GAGTC 3 cut(s) 353, 512, 789
MmeI TCCRAC 2 cut(s) 130, 721
MnlI CCTC 6 cut(s) 186, 328, 520, 941, 952, 997
Mox20I TGGCCA 1 cut(s) 323
Mph1103I ATGCAT 1 cut(s) 9
MroXI GAANNNNTTC 1 cut(s) 372
MscI TGGCCA 1 cut(s) 323
MseI TTAA 9 cut(s) 42, 168, 258, 363, 462, 563, 602, 725, 1060
MslI CAYNNNNRTG 2 cut(s) 396, 971
Msp20I TGGCCA 1 cut(s) 323
MspR9I CCNGG 1 cut(s) 489
MvaI CCWGG 1 cut(s) 489
MwoI GCNNNNNNNGC 1 cut(s) 23
NcoI CCATGG 1 cut(s) 329
NdeII GATC 6 cut(s) 31, 221, 232, 501, 692, 904
NlaIII CATG 6 cut(s) 301, 333, 395, 415, 911, 923
NlaIV GGNNCC 1 cut(s) 503
NmeAIII GCCGAG 1 cut(s) 808
NsiI ATGCAT 1 cut(s) 9
OliI CACNNNNGTG 1 cut(s) 971
PdmI GAANNNNTTC 1 cut(s) 372
PfeI GAWTC 2 cut(s) 196, 386
PflMI CCANNNNNTGG 1 cut(s) 330
PkrI GCNGC 2 cut(s) 210, 406
PleI GAGTC 3 cut(s) 352, 512, 789
PpsI GAGTC 3 cut(s) 352, 512, 789
PsiI TTATAA 2 cut(s) 476, 1035
Psp6I CCWGG 1 cut(s) 487
PspGI CCWGG 1 cut(s) 487
PspN4I GGNNCC 1 cut(s) 503
PspPI GGNCC 2 cut(s) 151, 491
PstNI CAGNNNCTG 1 cut(s) 494
PsuI RGATCY 2 cut(s) 221, 501
RsaI GTAC 4 cut(s) 136, 410, 509, 673
RsaNI GTAC 4 cut(s) 135, 409, 508, 672
RseI CAYNNNNRTG 2 cut(s) 396, 971
SaqAI TTAA 9 cut(s) 42, 168, 258, 363, 462, 563, 602, 725, 1060
SatI GCNGC 2 cut(s) 209, 405
Sau3AI GATC 6 cut(s) 31, 221, 232, 501, 692, 904
Sau96I GGNCC 2 cut(s) 151, 491
SchI GAGTC 3 cut(s) 353, 512, 789
ScrFI CCNGG 1 cut(s) 489
SduI GDGCHC 1 cut(s) 622
SetI ASST 8 cut(s) 28, 58, 143, 459, 580, 619, 708, 900
SfaNI GCATC 2 cut(s) 391, 900
SinI GGWCC 1 cut(s) 151
SmiMI CAYNNNNRTG 2 cut(s) 396, 971
Sse9I AATT 8 cut(s) 379, 482, 557, 565, 570, 734, 821, 951
SsiI CCGC 1 cut(s) 208
SspI AATATT 1 cut(s) 643
SspMI CTAG 1 cut(s) 747
StyD4I CCNGG 1 cut(s) 487
StyI CCWWGG 1 cut(s) 329
TaaI ACNGT 1 cut(s) 312
TaiI ACGT 1 cut(s) 459
TaqI TCGA 1 cut(s) 516
TasI AATT 8 cut(s) 379, 482, 557, 565, 570, 734, 821, 951
TatI WGTACW 1 cut(s) 507
TauI GCSGC 1 cut(s) 211
TfiI GAWTC 2 cut(s) 196, 386
Tru1I TTAA 9 cut(s) 42, 168, 258, 363, 462, 563, 602, 725, 1060
Tru9I TTAA 9 cut(s) 42, 168, 258, 363, 462, 563, 602, 725, 1060
TseI GCWGC 1 cut(s) 404
TspDTI ATGAA 2 cut(s) 165, 381
TspGWI ACGGA 1 cut(s) 514
Van91I CCANNNNNTGG 1 cut(s) 330
VpaK11BI GGWCC 1 cut(s) 151
XapI RAATTY 3 cut(s) 557, 565, 951
XmnI GAANNNNTTC 1 cut(s) 372
XspI CTAG 1 cut(s) 747
Zsp2I ATGCAT 1 cut(s) 9
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.