Rmu_sc0000315.1_g000010

Helicase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000315.1
OG0000080
Physical Location & Seq
Forward (+)
37000 .. 38756
1757 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000315.1_g000010.1.cds

Sequence Viewer

Length: 1680 bp
atgatagaagattatgcttcttcaagcactgcagtcagtgcacgtatcacaaaaagactcttacgagacttaaacggattgctggtgcaacatactaaatctgtttgtgattatgatttgcctgaaatggatgaagattatggtgaagattcgtcaatgcctaggctaatacaggatgaagtttcaattatcattcctcaagaagactgcgatgcagttcatctcttgaatgaggatcagtcatttgcatacaatgcaataatatcagctatagagtgcaatgacaatgccatatttttcgttgatggtccaggagggactggaaaaacatacttatatcgtgcacttttagcaaccttgagaagcaatgatcatattgtactggcatcagcaacttctggaattgcagcaacaataatgcctggtgggagaacggcacactccaggtttaaaactccactcaatcttgatgcatcttctacatgctctgttagtaaacaatctaatttagcagagttgatacgaagatcatcagcgattatttgtgatgaggcaccaatgatgcatagatttgcatttgaagctcttgatcggacttttaaagacataataggtgttgatttgccatttgggggcaaagtgattatttttgggggagatttccgacaagttctgcctgttgtccataagggtacaaggtctcaaatggtccaagccagtctggttaactcttcattttggaaagatgtgaggattcttcatttgcggcaaaatatgagatctatcaatgatccagagttctcagagtttttacttaatgttggtaatggaggacaaccatctgtggttgaagacatgatacaattaccgtcgtgtatggccataccatgggagggtgaagagtcaatcaaccgattagttaatgaaatttttcctaatttggaatctcatgtaaatgatgcagcgtacatggttgaaagggcaataatcactccaaaggatgatgatgttgacgtgattaatgagatgattataaagcaatttccagggcctgaacggatcctgtactctttcgactcagttgaggatgacacccgaaatatgtaccaacaagaattcttaaattcaatttcaccttctgttgaggatgacacccgaaatatgtaccaacaagaattcttaaattcaatttcaccttctggtatgcccccacatcagttaactataaataaaggtgctcccattatgcttttgagaaatattgaccctacgatgggattgtgcaatggtacacgattgacttgccgtggatcatataacaaccttattgacgcagagattttaactggtcaatttgttggaactagagtattcttaccaagaatatctctaaagagtgccgagagttctggactcccttttgagatgacaagaaaacaattccctgtaaagttgagttttgcacttactataaataaatcacaagagcaaacaataccgaatgttggcatcttccttccagatcatgtattcagtcatgggcagttatatgtcgctttatcacgaggaatttcagaggctaccaccaaagtgttagtcaagaaaggctcatttgaaggcgaggaaggggtgttcacaacaaatgttgtttataaagagattttgcttccagcaacttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

559

Amino Acids

62.08

Weight (kDa)

4.97

Isoelectric Point (pI)

51.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1034, 1653
AccB1I GGYRCC 1 cut(s) 553
AccB7I CCANNNNNTGG 1 cut(s) 888
AciI CCGC 1 cut(s) 766
AclWI GGATC 5 cut(s) 243, 785, 1054, 1067, 1318
AcoI YGGCCR 1 cut(s) 879
AcsI RAATTY 6 cut(s) 927, 1115, 1123, 1175, 1183, 1569
AfaI GTAC 7 cut(s) 381, 694, 968, 1067, 1106, 1166, 1291
AfiI CCNNNNNNNGG 6 cut(s) 632, 888, 893, 1273, 1274, 1505
AgsI TTSAA 9 cut(s) 24, 186, 229, 581, 851, 977, 1128, 1188, 1616
AjiI CACGTC 1 cut(s) 1015
AjnI CCWGG 4 cut(s) 310, 421, 443, 1045
AleI CACNNNNGTG 1 cut(s) 1589
AloI GAACNNNNNNTCC 2 cut(s) 1616, 1648
AluBI AGCT 2 cut(s) 269, 584
AluI AGCT 2 cut(s) 269, 584
Alw21I GWGCWC 3 cut(s) 43, 346, 1240
Alw26I GTCTC 2 cut(s) 60, 705
Alw44I GTGCAC 2 cut(s) 39, 342
AlwI GGATC 5 cut(s) 243, 785, 1054, 1067, 1318
AlwNI CAGNNNCTG 1 cut(s) 1052
AoxI GGCC 2 cut(s) 879, 1049
ApaLI GTGCAC 2 cut(s) 39, 342
ApeKI GCWGC 2 cut(s) 407, 962
ApoI RAATTY 6 cut(s) 927, 1115, 1123, 1175, 1183, 1569
ArsI GACNNNNNNTTYG 2 cut(s) 1581, 1613
AseI ATTAAT 1 cut(s) 1020
Asp700I GAANNNNTTC 1 cut(s) 930
AspA2I CCTAGG 1 cut(s) 161
AspS9I GGNCC 3 cut(s) 308, 709, 1049
AsuHPI GGTGA 4 cut(s) 155, 908, 1125, 1185
AvaII GGWCC 2 cut(s) 308, 709
AvrII CCTAGG 1 cut(s) 161
BaeGI GKGCMC 2 cut(s) 43, 346
BalI TGGCCA 1 cut(s) 881
BamHI GGATCC 1 cut(s) 1059
BanI GGYRCC 1 cut(s) 553
BarI GAAGNNNNNNTAC 2 cut(s) 843, 875
BauI CACGAG 1 cut(s) 1563
BbsI GAAGAC 2 cut(s) 210, 858
Bbv12I GWGCWC 3 cut(s) 43, 346, 1240
BbvI GCAGC 2 cut(s) 419, 974
BccI CCATC 3 cut(s) 299, 847, 1267
BceAI ACGGC 2 cut(s) 450, 1290
BcgI CGANNNNNNTGC 2 cut(s) 1284, 1318
BciT130I CCWGG 4 cut(s) 312, 423, 445, 1047
BclI TGATCA 1 cut(s) 370
BcoDI GTCTC 2 cut(s) 60, 705
BfaI CTAG 2 cut(s) 162, 1365
BfmI CTRYAG 2 cut(s) 30, 270
BglII AGATCT 1 cut(s) 779
BisI GCNGC 3 cut(s) 408, 767, 963
BlnI CCTAGG 1 cut(s) 161
BlsI GCNGC 3 cut(s) 409, 768, 964
Bme1390I CCNGG 4 cut(s) 312, 423, 445, 1047
Bme18I GGWCC 2 cut(s) 308, 709
BmgBI CACGTC 1 cut(s) 1015
BmgT120I GGNCC 3 cut(s) 308, 709, 1049
BmiI GGNNCC 2 cut(s) 555, 1061
BmrFI CCNGG 4 cut(s) 312, 423, 445, 1047
BmsI GCATC 7 cut(s) 202, 395, 460, 482, 552, 949, 1518
BpiI GAAGAC 2 cut(s) 210, 858
BpmI CTGGAG 1 cut(s) 427
BpuEI CTTGAG 2 cut(s) 183, 379
BsaAI YACGTR 1 cut(s) 44
BsaI GGTCTC 1 cut(s) 705
BsaJI CCNNGG 4 cut(s) 161, 887, 1046, 1306
Bsc4I CCNNNNNNNGG 6 cut(s) 632, 888, 893, 1273, 1274, 1505
Bse1I ACTGG 4 cut(s) 325, 387, 717, 1351
Bse3DI GCAATG 3 cut(s) 286, 373, 1291
BseBI CCWGG 4 cut(s) 312, 423, 445, 1047
BseDI CCNNGG 4 cut(s) 161, 887, 1046, 1306
BseGI GGATG 5 cut(s) 136, 181, 1006, 1093, 1153
BseLI CCNNNNNNNGG 6 cut(s) 632, 888, 893, 1273, 1274, 1505
BseMI GCAATG 3 cut(s) 286, 373, 1291
BseMII CTCAG 2 cut(s) 816, 1092
BseNI ACTGG 4 cut(s) 325, 387, 717, 1351
BseSI GKGCMC 2 cut(s) 43, 346
BseXI GCAGC 2 cut(s) 419, 974
BshFI GGCC 2 cut(s) 881, 1051
BshNI GGYRCC 1 cut(s) 553
BsiHKAI GWGCWC 3 cut(s) 43, 346, 1240
BslFI GGGAC 1 cut(s) 331
BslI CCNNNNNNNGG 6 cut(s) 632, 888, 893, 1273, 1274, 1505
BsmAI GTCTC 2 cut(s) 60, 705
BsmFI GGGAC 1 cut(s) 331
BsnI GGCC 2 cut(s) 881, 1051
Bso31I GGTCTC 1 cut(s) 705
Bsp1286I GDGCHC 3 cut(s) 43, 346, 1240
Bsp143I GATC 9 cut(s) 235, 370, 527, 589, 779, 790, 1059, 1310, 1522
Bsp19I CCATGG 1 cut(s) 887
BspACI CCGC 1 cut(s) 766
BspANI GGCC 2 cut(s) 881, 1051
BspCNI CTCAG 2 cut(s) 815, 1091
BspLI GGNNCC 2 cut(s) 555, 1061
BspMAI CTGCAG 1 cut(s) 34
BspPI GGATC 5 cut(s) 243, 785, 1054, 1067, 1318
BspT107I GGYRCC 1 cut(s) 553
BspTNI GGTCTC 1 cut(s) 705
BsrDI GCAATG 3 cut(s) 286, 373, 1291
BsrI ACTGG 4 cut(s) 325, 387, 717, 1351
BssECI CCNNGG 4 cut(s) 161, 887, 1046, 1306
BssMI GATC 9 cut(s) 235, 370, 527, 589, 779, 790, 1059, 1310, 1522
BssSI CACGAG 1 cut(s) 1563
BssT1I CCWWGG 2 cut(s) 161, 887
Bst2BI CACGAG 1 cut(s) 1563
Bst2UI CCWGG 4 cut(s) 312, 423, 445, 1047
Bst4CI ACNGT 1 cut(s) 870
Bst6I CTCTTC 2 cut(s) 736, 894
BstAPI GCANNNNNTGC 2 cut(s) 38, 254
BstBAI YACGTR 1 cut(s) 44
BstDEI CTNAG 2 cut(s) 802, 1078
BstDSI CCRYGG 2 cut(s) 887, 1306
BstF5I GGATG 5 cut(s) 136, 181, 1006, 1093, 1153
BstKTI GATC 9 cut(s) 238, 373, 530, 592, 782, 793, 1062, 1313, 1525
BstMAI GTCTC 2 cut(s) 60, 705
BstMBI GATC 9 cut(s) 235, 370, 527, 589, 779, 790, 1059, 1310, 1522
BstMWI GCNNNNNNNGC 4 cut(s) 38, 254, 350, 581
BstNI CCWGG 4 cut(s) 312, 423, 445, 1047
BstNSI RCATGY 1 cut(s) 486
BstSCI CCNGG 4 cut(s) 310, 421, 443, 1045
BstSFI CTRYAG 2 cut(s) 30, 270
BstSLI GKGCMC 2 cut(s) 43, 346
BstV1I GCAGC 2 cut(s) 419, 974
BstV2I GAAGAC 2 cut(s) 210, 858
BstX2I RGATCY 2 cut(s) 779, 1059
BstYI RGATCY 2 cut(s) 779, 1059
BsuRI GGCC 2 cut(s) 881, 1051
BtgI CCRYGG 2 cut(s) 887, 1306
BtgZI GCGATG 1 cut(s) 225
BtrI CACGTC 1 cut(s) 1015
BtsCI GGATG 5 cut(s) 136, 181, 1006, 1093, 1153
BtsI GCAGTG 1 cut(s) 27
BtsIMutI CAGTG 2 cut(s) 27, 43
CaiI CAGNNNCTG 1 cut(s) 1052
Cfr13I GGNCC 3 cut(s) 308, 709, 1049
CseI GACGC 1 cut(s) 1340
Csp6I GTAC 7 cut(s) 380, 693, 967, 1066, 1105, 1165, 1290
CviAII CATG 7 cut(s) 483, 856, 888, 950, 970, 1526, 1538
CviJI RGCY 8 cut(s) 166, 269, 584, 716, 881, 1051, 1580, 1608
CviKI_1 RGCY 8 cut(s) 166, 269, 584, 716, 881, 1051, 1580, 1608
CviQI GTAC 7 cut(s) 380, 693, 967, 1066, 1105, 1165, 1290
DdeI CTNAG 2 cut(s) 802, 1078
DpnI GATC 9 cut(s) 237, 372, 529, 591, 781, 792, 1061, 1312, 1524
DpnII GATC 9 cut(s) 235, 370, 527, 589, 779, 790, 1059, 1310, 1522
DraI TTTAAA 2 cut(s) 451, 601
EaeI YGGCCR 1 cut(s) 879
Eam1104I CTCTTC 2 cut(s) 736, 894
EarI CTCTTC 2 cut(s) 736, 894
Eco130I CCWWGG 2 cut(s) 161, 887
Eco31I GGTCTC 1 cut(s) 705
Eco47I GGWCC 2 cut(s) 308, 709
EcoO109I RGGNCCY 1 cut(s) 1049
EcoRI GAATTC 2 cut(s) 1115, 1175
EcoRII CCWGG 4 cut(s) 310, 421, 443, 1045
EcoT14I CCWWGG 2 cut(s) 161, 887
EcoT22I ATGCAT 2 cut(s) 475, 567
ErhI CCWWGG 2 cut(s) 161, 887
FaeI CATG 7 cut(s) 486, 859, 891, 953, 973, 1529, 1541
FaqI GGGAC 1 cut(s) 331
FatI CATG 7 cut(s) 482, 855, 887, 949, 969, 1525, 1537
FbaI TGATCA 1 cut(s) 370
Fnu4HI GCNGC 3 cut(s) 408, 767, 963
FokI GGATG 5 cut(s) 143, 188, 1013, 1100, 1160
Fsp4HI GCNGC 3 cut(s) 408, 767, 963
FspBI CTAG 2 cut(s) 162, 1365
GluI GCNGC 3 cut(s) 408, 767, 963
GsuI CTGGAG 1 cut(s) 427
HaeIII GGCC 2 cut(s) 881, 1051
HgaI GACGC 1 cut(s) 1340
Hin1II CATG 7 cut(s) 486, 859, 891, 953, 973, 1529, 1541
HincII GTYRAC 3 cut(s) 727, 1012, 1221
HindII GTYRAC 3 cut(s) 727, 1012, 1221
HinfI GANTC 7 cut(s) 57, 149, 754, 902, 944, 1076, 1413
HpaI GTTAAC 2 cut(s) 727, 1221
HphI GGTGA 4 cut(s) 155, 908, 1125, 1185
Hpy166II GTNNAC 8 cut(s) 41, 344, 497, 727, 1012, 1221, 1292, 1635
Hpy188I TCNGA 4 cut(s) 594, 665, 805, 1576
Hpy8I GTNNAC 8 cut(s) 41, 344, 497, 727, 1012, 1221, 1292, 1635
Hpy99I CGWCG 1 cut(s) 874
HpyAV CCTTC 5 cut(s) 1146, 1206, 1526, 1610, 1619
HpyCH4III ACNGT 1 cut(s) 870
HpyCH4IV ACGT 2 cut(s) 43, 1014
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 254, 350, 581
HpyF3I CTNAG 2 cut(s) 802, 1078
HpySE526I ACGT 2 cut(s) 43, 1014
Hsp92II CATG 7 cut(s) 486, 859, 891, 953, 973, 1529, 1541
Ksp22I TGATCA 1 cut(s) 370
KspAI GTTAAC 2 cut(s) 727, 1221
Kzo9I GATC 9 cut(s) 235, 370, 527, 589, 779, 790, 1059, 1310, 1522
LmnI GCTCC 1 cut(s) 1243
Lsp1109I GCAGC 2 cut(s) 419, 974
LweI GCATC 7 cut(s) 202, 395, 460, 482, 552, 949, 1518
MaeI CTAG 2 cut(s) 162, 1365
MaeII ACGT 2 cut(s) 43, 1014
MalI GATC 9 cut(s) 237, 372, 529, 591, 781, 792, 1061, 1312, 1524
MboI GATC 9 cut(s) 235, 370, 527, 589, 779, 790, 1059, 1310, 1522
MflI RGATCY 2 cut(s) 779, 1059
MhlI GDGCHC 3 cut(s) 43, 346, 1240
MlsI TGGCCA 1 cut(s) 881
MluNI TGGCCA 1 cut(s) 881
MlyI GAGTC 4 cut(s) 51, 911, 1070, 1407
MmeI TCCRAC 2 cut(s) 688, 1339
Mox20I TGGCCA 1 cut(s) 881
Mph1103I ATGCAT 2 cut(s) 475, 567
MroXI GAANNNNTTC 1 cut(s) 930
MscI TGGCCA 1 cut(s) 881
MslI CAYNNNNRTG 2 cut(s) 954, 1589
Msp20I TGGCCA 1 cut(s) 881
MspR9I CCNGG 4 cut(s) 312, 423, 445, 1047
MvaI CCWGG 4 cut(s) 312, 423, 445, 1047
MwoI GCNNNNNNNGC 4 cut(s) 38, 254, 350, 581
NcoI CCATGG 1 cut(s) 887
NdeII GATC 9 cut(s) 235, 370, 527, 589, 779, 790, 1059, 1310, 1522
NlaIII CATG 7 cut(s) 486, 859, 891, 953, 973, 1529, 1541
NlaIV GGNNCC 2 cut(s) 555, 1061
NmeAIII GCCGAG 1 cut(s) 1426
NsiI ATGCAT 2 cut(s) 475, 567
NspI RCATGY 1 cut(s) 486
OliI CACNNNNGTG 1 cut(s) 1589
PdmI GAANNNNTTC 1 cut(s) 930
PfeI GAWTC 3 cut(s) 149, 754, 944
PflMI CCANNNNNTGG 1 cut(s) 888
PfoI TCCNGGA 1 cut(s) 310
PkrI GCNGC 3 cut(s) 409, 768, 964
PleI GAGTC 4 cut(s) 51, 910, 1070, 1407
PpsI GAGTC 4 cut(s) 51, 910, 1070, 1407
Ppu21I YACGTR 1 cut(s) 44
PshBI ATTAAT 1 cut(s) 1020
PsiI TTATAA 2 cut(s) 1034, 1653
Psp6I CCWGG 4 cut(s) 310, 421, 443, 1045
PspGI CCWGG 4 cut(s) 310, 421, 443, 1045
PspN4I GGNNCC 2 cut(s) 555, 1061
PspPI GGNCC 3 cut(s) 308, 709, 1049
PstI CTGCAG 1 cut(s) 34
PstNI CAGNNNCTG 1 cut(s) 1052
PsuI RGATCY 2 cut(s) 779, 1059
RsaI GTAC 7 cut(s) 381, 694, 968, 1067, 1106, 1166, 1291
RsaNI GTAC 7 cut(s) 380, 693, 967, 1066, 1105, 1165, 1290
RseI CAYNNNNRTG 2 cut(s) 954, 1589
SatI GCNGC 3 cut(s) 408, 767, 963
Sau3AI GATC 9 cut(s) 235, 370, 527, 589, 779, 790, 1059, 1310, 1522
Sau96I GGNCC 3 cut(s) 308, 709, 1049
SchI GAGTC 4 cut(s) 51, 911, 1070, 1407
ScrFI CCNGG 4 cut(s) 312, 423, 445, 1047
SduI GDGCHC 3 cut(s) 43, 346, 1240
SfaNI GCATC 7 cut(s) 202, 395, 460, 482, 552, 949, 1518
SfcI CTRYAG 2 cut(s) 30, 270
SinI GGWCC 2 cut(s) 308, 709
SmiMI CAYNNNNRTG 2 cut(s) 954, 1589
SmlI CTYRAG 2 cut(s) 198, 358
SmoI CTYRAG 2 cut(s) 198, 358
SsiI CCGC 1 cut(s) 766
SspI AATATT 1 cut(s) 1261
SspMI CTAG 2 cut(s) 162, 1365
StyD4I CCNGG 4 cut(s) 310, 421, 443, 1045
StyI CCWWGG 2 cut(s) 161, 887
TaaI ACNGT 1 cut(s) 870
TaiI ACGT 2 cut(s) 46, 1017
TaqI TCGA 1 cut(s) 1074
TatI WGTACW 2 cut(s) 379, 1065
TauI GCSGC 1 cut(s) 769
TfiI GAWTC 3 cut(s) 149, 754, 944
TscAI CASTG 2 cut(s) 34, 43
TseI GCWGC 2 cut(s) 407, 962
TspDTI ATGAA 6 cut(s) 147, 192, 209, 723, 749, 939
TspGWI ACGGA 2 cut(s) 90, 1072
TspRI CASTG 2 cut(s) 34, 43
Van91I CCANNNNNTGG 1 cut(s) 888
VneI GTGCAC 2 cut(s) 39, 342
VpaK11BI GGWCC 2 cut(s) 308, 709
VspI ATTAAT 1 cut(s) 1020
XapI RAATTY 6 cut(s) 927, 1115, 1123, 1175, 1183, 1569
XceI RCATGY 1 cut(s) 486
XmaJI CCTAGG 1 cut(s) 161
XmnI GAANNNNTTC 1 cut(s) 930
XspI CTAG 2 cut(s) 162, 1365
Zsp2I ATGCAT 2 cut(s) 475, 567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.