G-quadruplex DNA unwinding
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 513 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 45 |
| AciI | CCGC | 1 cut(s) | 339 |
| AclWI | GGATC | 1 cut(s) | 155 |
| AcsI | RAATTY | 1 cut(s) | 485 |
| AfaI | GTAC | 1 cut(s) | 211 |
| AgsI | TTSAA | 4 cut(s) | 70, 249, 466, 519 |
| AluBI | AGCT | 2 cut(s) | 204, 433 |
| AluI | AGCT | 2 cut(s) | 204, 433 |
| Alw26I | GTCTC | 1 cut(s) | 176 |
| AlwI | GGATC | 1 cut(s) | 155 |
| ApoI | RAATTY | 1 cut(s) | 485 |
| AsuHPI | GGTGA | 1 cut(s) | 245 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 193, 225 |
| BbsI | GAAGAC | 1 cut(s) | 43 |
| BclI | TGATCA | 2 cut(s) | 90, 151 |
| BcoDI | GTCTC | 1 cut(s) | 176 |
| BfaI | CTAG | 2 cut(s) | 165, 444 |
| BmcAI | AGTACT | 1 cut(s) | 211 |
| BmsI | GCATC | 1 cut(s) | 269 |
| BpiI | GAAGAC | 1 cut(s) | 43 |
| BpuEI | CTTGAG | 1 cut(s) | 190 |
| Bse3DI | GCAATG | 1 cut(s) | 127 |
| BseMI | GCAATG | 1 cut(s) | 127 |
| BseMII | CTCAG | 1 cut(s) | 95 |
| BsmAI | GTCTC | 1 cut(s) | 176 |
| Bsp143I | GATC | 4 cut(s) | 56, 90, 151, 160 |
| BspACI | CCGC | 1 cut(s) | 339 |
| BspCNI | CTCAG | 1 cut(s) | 94 |
| BspPI | GGATC | 1 cut(s) | 155 |
| BsrDI | GCAATG | 1 cut(s) | 127 |
| BssMI | GATC | 4 cut(s) | 56, 90, 151, 160 |
| BstDEI | CTNAG | 1 cut(s) | 81 |
| BstKTI | GATC | 4 cut(s) | 59, 93, 154, 163 |
| BstMAI | GTCTC | 1 cut(s) | 176 |
| BstMBI | GATC | 4 cut(s) | 56, 90, 151, 160 |
| BstV2I | GAAGAC | 1 cut(s) | 43 |
| BstX2I | RGATCY | 1 cut(s) | 160 |
| BstYI | RGATCY | 1 cut(s) | 160 |
| BtsIMutI | CAGTG | 1 cut(s) | 6 |
| Csp6I | GTAC | 1 cut(s) | 210 |
| CviAII | CATG | 1 cut(s) | 169 |
| CviJI | RGCY | 4 cut(s) | 77, 85, 204, 433 |
| CviKI_1 | RGCY | 4 cut(s) | 77, 85, 204, 433 |
| CviQI | GTAC | 1 cut(s) | 210 |
| DdeI | CTNAG | 1 cut(s) | 81 |
| DpnI | GATC | 4 cut(s) | 58, 92, 153, 162 |
| DpnII | GATC | 4 cut(s) | 56, 90, 151, 160 |
| DraI | TTTAAA | 1 cut(s) | 493 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 45 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 45 |
| EcoT22I | ATGCAT | 1 cut(s) | 142 |
| FaeI | CATG | 1 cut(s) | 172 |
| FaiI | YATR | 9 cut(s) | 23, 95, 150, 170, 300, 346, 400, 402, 513 |
| FatI | CATG | 1 cut(s) | 168 |
| FbaI | TGATCA | 2 cut(s) | 90, 151 |
| FspBI | CTAG | 2 cut(s) | 165, 444 |
| Hin1II | CATG | 1 cut(s) | 172 |
| HindIII | AAGCTT | 1 cut(s) | 431 |
| HinfI | GANTC | 2 cut(s) | 184, 305 |
| HphI | GGTGA | 1 cut(s) | 245 |
| Hpy166II | GTNNAC | 1 cut(s) | 242 |
| Hpy188I | TCNGA | 1 cut(s) | 506 |
| Hpy188III | TCNNGA | 2 cut(s) | 309, 352 |
| Hpy8I | GTNNAC | 1 cut(s) | 242 |
| HpyAV | CCTTC | 1 cut(s) | 413 |
| HpyCH4IV | ACGT | 1 cut(s) | 132 |
| HpyCH4V | TGCA | 5 cut(s) | 115, 140, 344, 383, 389 |
| HpyF3I | CTNAG | 1 cut(s) | 81 |
| HpySE526I | ACGT | 1 cut(s) | 132 |
| Hsp92II | CATG | 1 cut(s) | 172 |
| Ksp22I | TGATCA | 2 cut(s) | 90, 151 |
| Kzo9I | GATC | 4 cut(s) | 56, 90, 151, 160 |
| LpnPI | CCDG | 6 cut(s) | 26, 99, 119, 294, 337, 410 |
| LweI | GCATC | 1 cut(s) | 269 |
| MaeI | CTAG | 2 cut(s) | 165, 444 |
| MaeII | ACGT | 1 cut(s) | 132 |
| MalI | GATC | 4 cut(s) | 58, 92, 153, 162 |
| MboI | GATC | 4 cut(s) | 56, 90, 151, 160 |
| MboII | GAAGA | 3 cut(s) | 48, 66, 314 |
| MfeI | CAATTG | 3 cut(s) | 249, 392, 522 |
| MflI | RGATCY | 1 cut(s) | 160 |
| MluCI | AATT | 7 cut(s) | 249, 392, 406, 457, 485, 514, 522 |
| MlyI | GAGTC | 1 cut(s) | 178 |
| Mph1103I | ATGCAT | 1 cut(s) | 142 |
| MseI | TTAA | 1 cut(s) | 492 |
| MunI | CAATTG | 3 cut(s) | 249, 392, 522 |
| NdeII | GATC | 4 cut(s) | 56, 90, 151, 160 |
| NlaIII | CATG | 1 cut(s) | 172 |
| NsiI | ATGCAT | 1 cut(s) | 142 |
| PfeI | GAWTC | 1 cut(s) | 305 |
| PleI | GAGTC | 1 cut(s) | 178 |
| PpsI | GAGTC | 1 cut(s) | 178 |
| PsiI | TTATAA | 1 cut(s) | 513 |
| PsuI | RGATCY | 1 cut(s) | 160 |
| RsaI | GTAC | 1 cut(s) | 211 |
| RsaNI | GTAC | 1 cut(s) | 210 |
| SaqAI | TTAA | 1 cut(s) | 492 |
| Sau3AI | GATC | 4 cut(s) | 56, 90, 151, 160 |
| ScaI | AGTACT | 1 cut(s) | 211 |
| SchI | GAGTC | 1 cut(s) | 178 |
| SetI | ASST | 5 cut(s) | 135, 206, 429, 435, 445 |
| SfaNI | GCATC | 1 cut(s) | 269 |
| SmlI | CTYRAG | 1 cut(s) | 205 |
| SmoI | CTYRAG | 1 cut(s) | 205 |
| Sse9I | AATT | 7 cut(s) | 249, 392, 406, 457, 485, 514, 522 |
| SsiI | CCGC | 1 cut(s) | 339 |
| SspMI | CTAG | 2 cut(s) | 165, 444 |
| TaiI | ACGT | 1 cut(s) | 135 |
| TaqI | TCGA | 2 cut(s) | 59, 199 |
| TasI | AATT | 7 cut(s) | 249, 392, 406, 457, 485, 514, 522 |
| TatI | WGTACW | 1 cut(s) | 209 |
| TfiI | GAWTC | 1 cut(s) | 305 |
| Tru1I | TTAA | 1 cut(s) | 492 |
| Tru9I | TTAA | 1 cut(s) | 492 |
| TscAI | CASTG | 1 cut(s) | 13 |
| TspDTI | ATGAA | 1 cut(s) | 315 |
| TspRI | CASTG | 1 cut(s) | 13 |
| XapI | RAATTY | 1 cut(s) | 485 |
| XspI | CTAG | 2 cut(s) | 165, 444 |
| ZrmI | AGTACT | 1 cut(s) | 211 |
| Zsp2I | ATGCAT | 1 cut(s) | 142 |