G-quadruplex DNA unwinding
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Helitron_like_N | PF14214 | 256 - 420 | 9e-46 | Helitron helicase-like domain at N-terminus |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 129, 1091 |
| Acc16I | TGCGCA | 1 cut(s) | 279 |
| AciI | CCGC | 1 cut(s) | 216 |
| AclWI | GGATC | 2 cut(s) | 196, 353 |
| AcoI | YGGCCR | 2 cut(s) | 259, 1115 |
| AcsI | RAATTY | 6 cut(s) | 91, 440, 566, 780, 908, 1188 |
| AcuI | CTGAAG | 1 cut(s) | 705 |
| AfaI | GTAC | 1 cut(s) | 594 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 257, 722 |
| AluBI | AGCT | 2 cut(s) | 539, 702 |
| AluI | AGCT | 2 cut(s) | 539, 702 |
| Alw26I | GTCTC | 2 cut(s) | 105, 1017 |
| AlwI | GGATC | 2 cut(s) | 196, 353 |
| Ama87I | CYCGRG | 1 cut(s) | 1020 |
| AoxI | GGCC | 2 cut(s) | 259, 1115 |
| ApeKI | GCWGC | 3 cut(s) | 941, 944, 1014 |
| ApoI | RAATTY | 6 cut(s) | 91, 440, 566, 780, 908, 1188 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 632, 664 |
| AseI | ATTAAT | 2 cut(s) | 255, 402 |
| AspLEI | GCGC | 1 cut(s) | 280 |
| AspS9I | GGNCC | 2 cut(s) | 194, 491 |
| AsuHPI | GGTGA | 3 cut(s) | 566, 575, 692 |
| AsuII | TTCGAA | 2 cut(s) | 314, 424 |
| AvaI | CYCGRG | 1 cut(s) | 1020 |
| AvaII | GGWCC | 2 cut(s) | 194, 491 |
| BalI | TGGCCA | 2 cut(s) | 261, 1117 |
| BbsI | GAAGAC | 1 cut(s) | 738 |
| BbvI | GCAGC | 3 cut(s) | 928, 931, 1026 |
| BccI | CCATC | 5 cut(s) | 179, 502, 599, 680, 1045 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 839, 873 |
| BcoDI | GTCTC | 2 cut(s) | 105, 1017 |
| BglII | AGATCT | 1 cut(s) | 1081 |
| BisI | GCNGC | 3 cut(s) | 942, 945, 1015 |
| BlsI | GCNGC | 3 cut(s) | 943, 946, 1016 |
| Bme18I | GGWCC | 2 cut(s) | 194, 491 |
| BmeT110I | CYCGRG | 1 cut(s) | 1020 |
| BmgT120I | GGNCC | 2 cut(s) | 194, 491 |
| BmsI | GCATC | 2 cut(s) | 841, 1036 |
| BpiI | GAAGAC | 1 cut(s) | 738 |
| Bpu14I | TTCGAA | 2 cut(s) | 314, 424 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 24, 54 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 257, 722 |
| Bse1I | ACTGG | 2 cut(s) | 22, 1015 |
| Bse3DI | GCAATG | 1 cut(s) | 768 |
| BseGI | GGATG | 1 cut(s) | 634 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 257, 722 |
| BseMI | GCAATG | 1 cut(s) | 768 |
| BseNI | ACTGG | 2 cut(s) | 22, 1015 |
| BseRI | GAGGAG | 1 cut(s) | 45 |
| BseXI | GCAGC | 3 cut(s) | 928, 931, 1026 |
| BshFI | GGCC | 2 cut(s) | 261, 1117 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1020 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 257, 722 |
| BsmAI | GTCTC | 2 cut(s) | 105, 1017 |
| BsnI | GGCC | 2 cut(s) | 261, 1117 |
| BsoBI | CYCGRG | 1 cut(s) | 1020 |
| Bsp119I | TTCGAA | 2 cut(s) | 314, 424 |
| Bsp1407I | TGTACA | 1 cut(s) | 592 |
| Bsp143I | GATC | 4 cut(s) | 188, 358, 696, 1081 |
| BspACI | CCGC | 1 cut(s) | 216 |
| BspANI | GGCC | 2 cut(s) | 261, 1117 |
| BspHI | TCATGA | 1 cut(s) | 784 |
| BspPI | GGATC | 2 cut(s) | 196, 353 |
| BspT104I | TTCGAA | 2 cut(s) | 314, 424 |
| BsrDI | GCAATG | 1 cut(s) | 768 |
| BsrGI | TGTACA | 1 cut(s) | 592 |
| BsrI | ACTGG | 2 cut(s) | 22, 1015 |
| BssMI | GATC | 4 cut(s) | 188, 358, 696, 1081 |
| Bst4CI | ACNGT | 1 cut(s) | 865 |
| BstAUI | TGTACA | 1 cut(s) | 592 |
| BstBI | TTCGAA | 2 cut(s) | 314, 424 |
| BstF5I | GGATG | 1 cut(s) | 634 |
| BstHHI | GCGC | 1 cut(s) | 280 |
| BstKTI | GATC | 4 cut(s) | 191, 361, 699, 1084 |
| BstMAI | GTCTC | 2 cut(s) | 105, 1017 |
| BstMBI | GATC | 4 cut(s) | 188, 358, 696, 1081 |
| BstV1I | GCAGC | 3 cut(s) | 928, 931, 1026 |
| BstV2I | GAAGAC | 1 cut(s) | 738 |
| BstX2I | RGATCY | 1 cut(s) | 1081 |
| BstYI | RGATCY | 1 cut(s) | 1081 |
| BsuRI | GGCC | 2 cut(s) | 261, 1117 |
| BtgZI | GCGATG | 1 cut(s) | 1064 |
| BtsCI | GGATG | 1 cut(s) | 634 |
| BtsIMutI | CAGTG | 1 cut(s) | 15 |
| CciI | TCATGA | 1 cut(s) | 784 |
| CfoI | GCGC | 1 cut(s) | 280 |
| Cfr13I | GGNCC | 2 cut(s) | 194, 491 |
| CseI | GACGC | 1 cut(s) | 323 |
| Csp6I | GTAC | 1 cut(s) | 593 |
| CviAII | CATG | 3 cut(s) | 785, 1027, 1148 |
| CviJI | RGCY | 7 cut(s) | 261, 413, 539, 702, 1017, 1117, 1240 |
| CviKI_1 | RGCY | 7 cut(s) | 261, 413, 539, 702, 1017, 1117, 1240 |
| CviQI | GTAC | 1 cut(s) | 593 |
| DpnI | GATC | 4 cut(s) | 190, 360, 698, 1083 |
| DpnII | GATC | 4 cut(s) | 188, 358, 696, 1081 |
| DraI | TTTAAA | 2 cut(s) | 816, 1138 |
| EaeI | YGGCCR | 2 cut(s) | 259, 1115 |
| Eco47I | GGWCC | 2 cut(s) | 194, 491 |
| Eco57I | CTGAAG | 1 cut(s) | 705 |
| Eco88I | CYCGRG | 1 cut(s) | 1020 |
| EcoO109I | RGGNCCY | 1 cut(s) | 194 |
| FaeI | CATG | 3 cut(s) | 788, 1030, 1151 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 686, 718 |
| FatI | CATG | 3 cut(s) | 784, 1026, 1147 |
| FauNDI | CATATG | 1 cut(s) | 676 |
| Fnu4HI | GCNGC | 3 cut(s) | 942, 945, 1015 |
| FokI | GGATG | 1 cut(s) | 621 |
| Fsp4HI | GCNGC | 3 cut(s) | 942, 945, 1015 |
| FspI | TGCGCA | 1 cut(s) | 279 |
| GlaI | GCGC | 1 cut(s) | 279 |
| GluI | GCNGC | 3 cut(s) | 942, 945, 1015 |
| HaeIII | GGCC | 2 cut(s) | 261, 1117 |
| HgaI | GACGC | 1 cut(s) | 323 |
| HhaI | GCGC | 1 cut(s) | 280 |
| Hin1II | CATG | 3 cut(s) | 788, 1030, 1151 |
| Hin6I | GCGC | 1 cut(s) | 278 |
| HinP1I | GCGC | 1 cut(s) | 278 |
| HinfI | GANTC | 3 cut(s) | 9, 316, 987 |
| HphI | GGTGA | 3 cut(s) | 566, 575, 692 |
| Hpy166II | GTNNAC | 1 cut(s) | 141 |
| Hpy188I | TCNGA | 5 cut(s) | 499, 577, 893, 914, 980 |
| Hpy8I | GTNNAC | 1 cut(s) | 141 |
| HpyAV | CCTTC | 2 cut(s) | 471, 734 |
| HpyCH4III | ACNGT | 1 cut(s) | 865 |
| HpyCH4V | TGCA | 5 cut(s) | 27, 773, 860, 1062, 1104 |
| Hsp92II | CATG | 3 cut(s) | 788, 1030, 1151 |
| HspAI | GCGC | 1 cut(s) | 278 |
| Kzo9I | GATC | 4 cut(s) | 188, 358, 696, 1081 |
| Lsp1109I | GCAGC | 3 cut(s) | 928, 931, 1026 |
| LweI | GCATC | 2 cut(s) | 841, 1036 |
| MaeIII | GTNAC | 2 cut(s) | 45, 554 |
| MalI | GATC | 4 cut(s) | 190, 360, 698, 1083 |
| MboI | GATC | 4 cut(s) | 188, 358, 696, 1081 |
| MboII | GAAGA | 8 cut(s) | 458, 527, 695, 743, 837, 881, 986, 1175 |
| MflI | RGATCY | 1 cut(s) | 1081 |
| MlsI | TGGCCA | 2 cut(s) | 261, 1117 |
| MluNI | TGGCCA | 2 cut(s) | 261, 1117 |
| MmeI | TCCRAC | 2 cut(s) | 958, 1185 |
| MnlI | CCTC | 6 cut(s) | 23, 26, 482, 523, 1029, 1201 |
| Mox20I | TGGCCA | 2 cut(s) | 261, 1117 |
| MscI | TGGCCA | 2 cut(s) | 261, 1117 |
| MslI | CAYNNNNRTG | 1 cut(s) | 180 |
| Msp20I | TGGCCA | 2 cut(s) | 261, 1117 |
| NdeI | CATATG | 1 cut(s) | 676 |
| NdeII | GATC | 4 cut(s) | 188, 358, 696, 1081 |
| NlaIII | CATG | 3 cut(s) | 788, 1030, 1151 |
| NmuCI | GTSAC | 1 cut(s) | 554 |
| NsbI | TGCGCA | 1 cut(s) | 279 |
| NspV | TTCGAA | 2 cut(s) | 314, 424 |
| PaeR7I | CTCGAG | 1 cut(s) | 1020 |
| PagI | TCATGA | 1 cut(s) | 784 |
| PfeI | GAWTC | 3 cut(s) | 9, 316, 987 |
| PkrI | GCNGC | 3 cut(s) | 943, 946, 1016 |
| PpuMI | RGGWCCY | 1 cut(s) | 194 |
| PshBI | ATTAAT | 2 cut(s) | 255, 402 |
| PsiI | TTATAA | 2 cut(s) | 129, 1091 |
| Psp5II | RGGWCCY | 1 cut(s) | 194 |
| PspPI | GGNCC | 2 cut(s) | 194, 491 |
| PspPPI | RGGWCCY | 1 cut(s) | 194 |
| PsuI | RGATCY | 1 cut(s) | 1081 |
| RsaI | GTAC | 1 cut(s) | 594 |
| RsaNI | GTAC | 1 cut(s) | 593 |
| RseI | CAYNNNNRTG | 1 cut(s) | 180 |
| SatI | GCNGC | 3 cut(s) | 942, 945, 1015 |
| Sau3AI | GATC | 4 cut(s) | 188, 358, 696, 1081 |
| Sau96I | GGNCC | 2 cut(s) | 194, 491 |
| SetI | ASST | 8 cut(s) | 73, 199, 253, 271, 463, 541, 704, 1174 |
| SfaNI | GCATC | 2 cut(s) | 841, 1036 |
| Sfr274I | CTCGAG | 1 cut(s) | 1020 |
| SfuI | TTCGAA | 2 cut(s) | 314, 424 |
| SinI | GGWCC | 2 cut(s) | 194, 491 |
| SlaI | CTCGAG | 1 cut(s) | 1020 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 180 |
| SmlI | CTYRAG | 1 cut(s) | 1020 |
| SmoI | CTYRAG | 1 cut(s) | 1020 |
| SsiI | CCGC | 1 cut(s) | 216 |
| SspI | AATATT | 4 cut(s) | 166, 367, 430, 842 |
| TaaI | ACNGT | 1 cut(s) | 865 |
| TaqI | TCGA | 9 cut(s) | 109, 134, 301, 314, 424, 487, 849, 1021, 1264 |
| TatI | WGTACW | 1 cut(s) | 592 |
| TfiI | GAWTC | 3 cut(s) | 9, 316, 987 |
| TscAI | CASTG | 1 cut(s) | 22 |
| TseFI | GTSAC | 1 cut(s) | 554 |
| TseI | GCWGC | 3 cut(s) | 941, 944, 1014 |
| Tsp45I | GTSAC | 1 cut(s) | 554 |
| TspRI | CASTG | 1 cut(s) | 22 |
| VpaK11BI | GGWCC | 2 cut(s) | 194, 491 |
| VspI | ATTAAT | 2 cut(s) | 255, 402 |
| XapI | RAATTY | 6 cut(s) | 91, 440, 566, 780, 908, 1188 |
| XhoI | CTCGAG | 1 cut(s) | 1020 |