Rmu_sc0019670.1_g000001

G-quadruplex DNA unwinding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019670.1
OG0000080
Physical Location & Seq
Reverse (-)
2 .. 1508
1507 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019670.1_g000001.1.cds

Sequence Viewer

Length: 1507 bp
atgaaaaatggaagttgcaataaaggctacccaaaaccatttgcaaatttcactgtgcaagggaacgatgcatatcctgtatatcggagacgagcaagtcatttaccagtacctttgcgtagacgaggagatgtgatggtggataacggttgggtggttccctacaacccatggttgctattacggtataattgtcacatcaatgttgaaatatgtgggagcataaaaagtgtcaagtacttatataagtatatctacaaaggtcctgacagagtggcacttgagctgcaatcaaacccagagtttgatgaaattagacaatttgttgatgcaaggtgggtctgtgcaccggaggctttatggaggatcttcaaatttgcaatgaacagaatatatccaacagtagagcgattacaaatacatcttcccaacatgcaacagataacattcaatgttgatgaaacagtagagaatattatggcagatgagcacgcacaaatgtcaatgcttactgattttttcaccataaatcgaatggatgaggatgcaagagcatatttgtatcgagaaattcctgaacattacagatgggataatagcaacaaaatttgggtgaaaagaaaaagaaactacaaggttattgggcgaatatacagcgtctcaccgtctgaaggtgagaaattttacctgcgtgtccttcttaatcatgtaagaggtccaagatcatttcgtgatttgcttactgttaatggtgttctacaaccaactttcaagcaagcagcagagaaacaaggtttgctagaaaatgacaatagtatccgacagtgtttgttggaggcctctgcaattaggatgccatcaactttgaggagattatttgtcacaattttagtgtacaatgagccaattggtgtccgaacattgtgggttgaatttttcccttttatggtggaagattatccttcatctggtgatattgcaaaccgaaacaggctcttacaagatttaaatggagtacttgaacaatttaacaggaacattagagattttgacctacctgaaatgacaacggagccagaagaaaattcaagaatgccaaggtgtattgaagacgaactttccgtacatatctctcaagaagacattgatgcaattgaccaccttaatgatgaccaaaggatcgcctttaacacgatcatggatgcagttcagagaaaaagaagtgcattattttttgttgatggtcctggtggaactgggaagacatatttataccgtgcattgctagcaaacatacgaagaatgaatcatatagtcttagccacaacatcatctggaatagctacaaatatactgcccggcgggaggacagctcactccagatttaagattccactcaatatagatgcgtcatctatgtgttccataagtaaacagtctgctctggcacaactggtacaggattcgactgcaattatttgggatgaggcacctatgacacatcgac
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

502

Amino Acids

58.2

Weight (kDa)

8.53

Isoelectric Point (pI)

57.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30739
fragaria_vesca FvH4_1g22680 FvH4_1g27610 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g06413 FvH4_2g09121 FvH4_3g12510 FvH4_3g14390 FvH4_3g14390 FvH4_3g22271 FvH4_3g22301 FvH4_3g27562 FvH4_3g32073 FvH4_3g32074 FvH4_3g36631 FvH4_3g36632 FvH4_4g22471 FvH4_4g27840 FvH4_4g34213 FvH4_5g07390 FvH4_5g19921 FvH4_5g24553 FvH4_5g25262 FvH4_5g25262 FvH4_5g25551 FvH4_5g25552 FvH4_5g26291 FvH4_5g30531 FvH4_5g33791 FvH4_6g00281 FvH4_6g14351 FvH4_6g29181 FvH4_6g38512 FvH4_6g38513 FvH4_7g14272 FvH4_7g16900 FvH4_7g16900 FvH4_7g16900
malus_domestica MD05G1321100.v1.1 MD11G1142100.v1.1 MD15G1301000.v1.1
prunus_persica Prupe.4G269900_v2.0.a1 Prupe.4G273400_v2.0.a1
pyrus_communis pycom01g00220 pycom01g00230 pycom01g00510 pycom01g12380 pycom04g01450 pycom11g26740 pycom12g05830 pycom15g02410 pycom15g39190 pycom16g21480 pycom5153684g00230
rosa_chinensis RchiOBHm_Chr0c36g0502891 RchiOBHm_Chr1g0343901 RchiOBHm_Chr1g0354911 RchiOBHm_Chr1g0354931 RchiOBHm_Chr2g0095281 RchiOBHm_Chr2g0130601 RchiOBHm_Chr2g0138981 RchiOBHm_Chr2g0140301 RchiOBHm_Chr3g0473521 RchiOBHm_Chr4g0421031 RchiOBHm_Chr4g0444461 RchiOBHm_Chr5g0006651 RchiOBHm_Chr5g0007701 RchiOBHm_Chr5g0010451 RchiOBHm_Chr5g0013161 RchiOBHm_Chr5g0039821 RchiOBHm_Chr5g0039831 RchiOBHm_Chr5g0051601 RchiOBHm_Chr5g0053341 RchiOBHm_Chr5g0066551 RchiOBHm_Chr5g0066561 RchiOBHm_Chr6g0270051 RchiOBHm_Chr7g0221811
rosa_multiflora Rmu_sc0000293.1_g000031 Rmu_sc0000315.1_g000010 Rmu_sc0000342.1_g000007 Rmu_sc0000368.1_g000031 Rmu_sc0000383.1_g000027 Rmu_sc0000383.1_g000028 Rmu_sc0000446.1_g000008 Rmu_sc0000642.1_g000009 Rmu_sc0000708.1_g000015 Rmu_sc0000733.1_g000005 Rmu_sc0000733.1_g000006 Rmu_sc0001074.1_g000029 Rmu_sc0001074.1_g000030 Rmu_sc0001083.1_g000002 Rmu_sc0001083.1_g000003 Rmu_sc0001400.1_g000026 Rmu_sc0001466.1_g000001 Rmu_sc0001590.1_g000012 Rmu_sc0001590.1_g000013 Rmu_sc0001593.1_g000007 Rmu_sc0001648.1_g000007 Rmu_sc0001648.1_g000008 Rmu_sc0001861.1_g000046 Rmu_sc0001861.1_g000047 Rmu_sc0002131.1_g000033 Rmu_sc0002153.1_g000001 Rmu_sc0002153.1_g000002 Rmu_sc0002284.1_g000017 Rmu_sc0002351.1_g000030 Rmu_sc0002495.1_g000040 Rmu_sc0002495.1_g000041 Rmu_sc0002540.1_g000006 Rmu_sc0002822.1_g000028 Rmu_sc0002822.1_g000029 Rmu_sc0002822.1_g000030 Rmu_sc0003074.1_g000028 Rmu_sc0003198.1_g000015 Rmu_sc0003207.1_g000042 Rmu_sc0003441.1_g000022 Rmu_sc0003880.1_g000015 Rmu_sc0004301.1_g000006 Rmu_sc0004368.1_g000014 Rmu_sc0004467.1_g000037 Rmu_sc0004467.1_g000038 Rmu_sc0004815.1_g000007 Rmu_sc0004836.1_g000008 Rmu_sc0005065.1_g000038 Rmu_sc0005400.1_g000007 Rmu_sc0005693.1_g000018 Rmu_sc0005956.1_g000001 Rmu_sc0005999.1_g000010 Rmu_sc0005999.1_g000011 Rmu_sc0006101.1_g000002 Rmu_sc0006101.1_g000003 Rmu_sc0006101.1_g000004 Rmu_sc0006119.1_g000014 Rmu_sc0006314.1_g000002 Rmu_sc0006478.1_g000019 Rmu_sc0006478.1_g000020 Rmu_sc0006729.1_g000003 Rmu_sc0006824.1_g000018 Rmu_sc0006898.1_g000009 Rmu_sc0006898.1_g000010 Rmu_sc0007131.1_g000012 Rmu_sc0007131.1_g000013 Rmu_sc0008829.1_g000003 Rmu_sc0008921.1_g000003 Rmu_sc0009472.1_g000019 Rmu_sc0009472.1_g000020 Rmu_sc0012301.1_g000003 Rmu_sc0015523.1_g000009 Rmu_sc0019288.1_g000001 Rmu_sc0019670.1_g000001 Rmu_sc0026849.1_g000001 Rmu_sc0026849.1_g000002 Rmu_sc0031895.1_g000001
rosa_roxburghii Rroxscaffold_176G00431570 Rroxscaffold_1G00011120 Rroxscaffold_2G00105630 Rroxscaffold_2G00122600 Rroxscaffold_2G00128220 Rroxscaffold_2G00129710 Rroxscaffold_3G00218940 Rroxscaffold_3G00247370 Rroxscaffold_4G00310060 Rroxscaffold_4G00313710 Rroxscaffold_4G00319150 Rroxscaffold_5G00346740 Rroxscaffold_5G00359690 Rroxscaffold_5G00365700 Rroxscaffold_6G00394170 Rroxscaffold_6G00404040 Rroxscaffold_7G00205320 Rroxscaffold_7G00211550 Rroxscaffold_7G00211560 Rroxscaffold_7G00215100
rosa_rugosa Rorug03G0285900 Rorug03G0286000 Rorug03G0286100 Rorug03G0286200 Rorug04G0098600 Rorug04G0098700 Rorug04G0098800 Rorug04G0139000 Rorug04G0209800 Rorug05G0101300 Rorug05G0101400 Rorug05G0101500 Rorug05G0415400 Rorug05G0466200 Rorug06G0017400 Rorug06G0017500 Rorug06G0151300 Rorug06G0318500 Rorug06G0318600 Rorug06G0318700.1
rosa_samantha Rh1CG085700 Rh1CG254600 Rh2BG228400 Rh2BG351000 Rh2CG225500 Rh2CG304800 Rh2DG104100 Rh2DG341000 Rh2DG380500 Rh3AG184300 Rh3AG184400 Rh3CG208500 Rh3CG208700 Rh3CG208900 Rh4AG207400 Rh4AG413200 Rh4BG424700 Rh4CG301500 Rh4CG439000 Rh4CG439100 Rh4CG439200 Rh5AG462900 Rh5BG193500 Rh5CG089900 Rh5CG300900 Rh5CG303800 Rh5CG343800 Rh5CG431500 Rh5CG431600 Rh5DG385700 Rh5DG396200 Rh6AG400600 Rh6AG400700 Rh6BG120400 Rh6BG293100 Rh6CG020800 Rh6DG504700 Rh7AG170200 Rh7AG364500 Rh7BG310700 Rh7BG326900 Rh7CG361900 Rh7DG342300
rosa_wichuraiana Rw0G001510 Rw0G002770 Rw0G002780 Rw0G008190 Rw0G012290 Rw0G013020 Rw0G019710 Rw0G022900 Rw1G005030 Rw1G006850 Rw1G007150 Rw1G008640 Rw1G010010 Rw1G014140 Rw1G014760 Rw1G021180 Rw1G024370 Rw2G008590 Rw2G008860 Rw2G013860 Rw2G018530 Rw2G019600 Rw2G021720 Rw2G022370 Rw3G005800 Rw3G024360 Rw3G027780 Rw3G028480 Rw3G029500 Rw3G029510 Rw4G000390 Rw4G008860 Rw4G013650 Rw4G016890 Rw4G016900 Rw4G018860 Rw4G018870 Rw4G032970 Rw5G004750 Rw5G004760 Rw5G004770 Rw5G011070 Rw5G011930 Rw5G015240 Rw5G015930 Rw5G019260 Rw5G021060 Rw5G027960 Rw5G028040 Rw5G028940 Rw5G031990 Rw5G044560 Rw5G049680 Rw6G014950 Rw6G015560 Rw6G016280 Rw6G017850 Rw6G018010 Rw6G019620 Rw6G028280 Rw7G010650 Rw7G016380 Rw7G020980 Rw7G025640 Rw7G027600 Rw7G029340 Rw7G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 96
Acc36I ACCTGC 1 cut(s) 696
AccB1I GGYRCC 1 cut(s) 1489
AccI GTMKAC 1 cut(s) 121
AciI CCGC 1 cut(s) 1362
AclWI GGATC 2 cut(s) 374, 1187
AcsI RAATTY 7 cut(s) 46, 374, 570, 606, 680, 932, 1084
AcuI CTGAAG 1 cut(s) 690
AfaI GTAC 6 cut(s) 111, 239, 896, 1017, 1125, 1458
AfiI CCNNNNNNNGG 4 cut(s) 671, 946, 968, 1365
AgsI TTSAA 8 cut(s) 209, 373, 451, 772, 932, 1022, 1089, 1109
AjnI CCWGG 1 cut(s) 1246
AluBI AGCT 3 cut(s) 286, 1343, 1373
AluI AGCT 3 cut(s) 286, 1343, 1373
Alw21I GWGCWC 2 cut(s) 349, 492
Alw26I GTCTC 2 cut(s) 82, 664
Alw44I GTGCAC 1 cut(s) 345
AlwI GGATC 2 cut(s) 374, 1187
AoxI GGCC 1 cut(s) 837
ApaLI GTGCAC 1 cut(s) 345
ApeKI GCWGC 2 cut(s) 286, 779
ApoI RAATTY 7 cut(s) 46, 374, 570, 606, 680, 932, 1084
AspS9I GGNCC 3 cut(s) 263, 716, 1244
AsuC2I CCSGG 1 cut(s) 1359
AsuHPI GGTGA 5 cut(s) 514, 625, 654, 686, 983
AsuNHI GCTAGC 1 cut(s) 1285
AvaII GGWCC 3 cut(s) 263, 716, 1244
BaeGI GKGCMC 1 cut(s) 349
BaeI ACNNNNGTAYC 2 cut(s) 799, 832
BanI GGYRCC 1 cut(s) 1489
BbsI GAAGAC 3 cut(s) 1116, 1146, 1268
Bbv12I GWGCWC 2 cut(s) 349, 492
BbvI GCAGC 2 cut(s) 273, 791
BccI CCATC 4 cut(s) 130, 582, 865, 1235
BciT130I CCWGG 1 cut(s) 1248
BciVI GTATCC 1 cut(s) 827
BcnI CCSGG 1 cut(s) 1359
BcoDI GTCTC 2 cut(s) 82, 664
BfaI CTAG 2 cut(s) 800, 1286
BfuAI ACCTGC 1 cut(s) 696
BfuI GTATCC 1 cut(s) 827
BisI GCNGC 2 cut(s) 287, 780
BlsI GCNGC 2 cut(s) 288, 781
BmcAI AGTACT 2 cut(s) 239, 1017
Bme1390I CCNGG 2 cut(s) 1248, 1359
Bme18I GGWCC 3 cut(s) 263, 716, 1244
BmgT120I GGNCC 3 cut(s) 263, 716, 1244
BmiI GGNNCC 3 cut(s) 159, 1074, 1491
BmrFI CCNGG 2 cut(s) 1248, 1359
BmrI ACTGGG 1 cut(s) 1266
BmsI GCATC 7 cut(s) 58, 319, 535, 843, 1138, 1192, 1396
BmtI GCTAGC 1 cut(s) 1289
BmuI ACTGGG 1 cut(s) 1266
BpiI GAAGAC 3 cut(s) 1116, 1146, 1268
BplI GAGNNNNNCTC 2 cut(s) 1357, 1389
BpmI CTGGAG 1 cut(s) 1363
BpuEI CTTGAG 2 cut(s) 302, 1119
BpuMI CCSGG 1 cut(s) 1359
BsaBI GATNNNNATC 1 cut(s) 72
BsaJI CCNNGG 2 cut(s) 170, 1097
BsaWI WCCGGW 1 cut(s) 349
Bsc4I CCNNNNNNNGG 4 cut(s) 671, 946, 968, 1365
Bse1I ACTGG 3 cut(s) 107, 1261, 1458
Bse3DI GCAATG 2 cut(s) 387, 1280
Bse8I GATNNNNATC 1 cut(s) 72
BseBI CCWGG 1 cut(s) 1248
BseDI CCNNGG 2 cut(s) 170, 1097
BseGI GGATG 5 cut(s) 544, 550, 858, 1207, 1489
BseJI GATNNNNATC 1 cut(s) 72
BseLI CCNNNNNNNGG 4 cut(s) 671, 946, 968, 1365
BseMI GCAATG 2 cut(s) 387, 1280
BseNI ACTGG 3 cut(s) 107, 1261, 1458
BseRI GAGGAG 2 cut(s) 141, 883
BseSI GKGCMC 1 cut(s) 349
BseXI GCAGC 2 cut(s) 273, 791
BshFI GGCC 1 cut(s) 839
BshNI GGYRCC 1 cut(s) 1489
BsiHKAI GWGCWC 2 cut(s) 349, 492
BsiSI CCGG 2 cut(s) 350, 1359
BslI CCNNNNNNNGG 4 cut(s) 671, 946, 968, 1365
BsmAI GTCTC 2 cut(s) 82, 664
BsmBI CGTCTC 2 cut(s) 82, 664
BsmI GAATGC 1 cut(s) 1098
BsnI GGCC 1 cut(s) 839
Bsp1286I GDGCHC 2 cut(s) 349, 492
Bsp1407I TGTACA 1 cut(s) 894
Bsp143I GATC 4 cut(s) 366, 722, 1179, 1194
Bsp19I CCATGG 1 cut(s) 170
BspACI CCGC 1 cut(s) 1362
BspANI GGCC 1 cut(s) 839
BspLI GGNNCC 3 cut(s) 159, 1074, 1491
BspMI ACCTGC 1 cut(s) 696
BspOI GCTAGC 1 cut(s) 1289
BspPI GGATC 2 cut(s) 374, 1187
BspT107I GGYRCC 1 cut(s) 1489
BsrDI GCAATG 2 cut(s) 387, 1280
BsrGI TGTACA 1 cut(s) 894
BsrI ACTGG 3 cut(s) 107, 1261, 1458
BssECI CCNNGG 2 cut(s) 170, 1097
BssMI GATC 4 cut(s) 366, 722, 1179, 1194
BssT1I CCWWGG 2 cut(s) 170, 1097
Bst2UI CCWGG 1 cut(s) 1248
BstAUI TGTACA 1 cut(s) 894
BstC8I GCNNGC 3 cut(s) 492, 777, 1287
BstDEI CTNAG 1 cut(s) 1318
BstDSI CCRYGG 1 cut(s) 170
BstF5I GGATG 5 cut(s) 544, 550, 858, 1207, 1489
BstKTI GATC 4 cut(s) 369, 725, 1182, 1197
BstMAI GTCTC 2 cut(s) 82, 664
BstMBI GATC 4 cut(s) 366, 722, 1179, 1194
BstMWI GCNNNNNNNGC 3 cut(s) 24, 353, 1286
BstNI CCWGG 1 cut(s) 1248
BstNSI RCATGY 1 cut(s) 436
BstSCI CCNGG 2 cut(s) 1246, 1357
BstSLI GKGCMC 1 cut(s) 349
BstV1I GCAGC 2 cut(s) 273, 791
BstV2I GAAGAC 3 cut(s) 1116, 1146, 1268
BstX2I RGATCY 1 cut(s) 366
BstYI RGATCY 1 cut(s) 366
BsuI GTATCC 1 cut(s) 827
BsuRI GGCC 1 cut(s) 839
BtgI CCRYGG 1 cut(s) 170
BtsCI GGATG 5 cut(s) 544, 550, 858, 1207, 1489
BtsIMutI CAGTG 2 cut(s) 51, 830
BveI ACCTGC 1 cut(s) 696
Cac8I GCNNGC 3 cut(s) 492, 777, 1287
Cfr13I GGNCC 3 cut(s) 263, 716, 1244
CseI GACGC 2 cut(s) 646, 1398
Csp6I GTAC 6 cut(s) 110, 238, 895, 1016, 1124, 1457
CviAII CATG 4 cut(s) 171, 433, 707, 1198
CviQI GTAC 6 cut(s) 110, 238, 895, 1016, 1124, 1457
DdeI CTNAG 1 cut(s) 1318
DpnI GATC 4 cut(s) 368, 724, 1181, 1196
DpnII GATC 4 cut(s) 366, 722, 1179, 1194
DraI TTTAAA 1 cut(s) 1008
DrdI GACNNNNNNGTC 1 cut(s) 96
DseDI GACNNNNNNGTC 1 cut(s) 96
Eco130I CCWWGG 2 cut(s) 170, 1097
Eco147I AGGCCT 1 cut(s) 839
Eco47I GGWCC 3 cut(s) 263, 716, 1244
Eco57I CTGAAG 1 cut(s) 690
EcoO109I RGGNCCY 1 cut(s) 263
EcoRII CCWGG 1 cut(s) 1246
EcoT14I CCWWGG 2 cut(s) 170, 1097
EcoT22I ATGCAT 1 cut(s) 73
ErhI CCWWGG 2 cut(s) 170, 1097
Esp3I CGTCTC 2 cut(s) 82, 664
FaeI CATG 4 cut(s) 174, 436, 710, 1201
FalI AAGNNNNNCTT 2 cut(s) 1101, 1133
FatI CATG 4 cut(s) 170, 432, 706, 1197
FauI CCCGC 1 cut(s) 1355
FblI GTMKAC 1 cut(s) 121
Fnu4HI GCNGC 2 cut(s) 287, 780
FokI GGATG 5 cut(s) 551, 557, 865, 1214, 1496
Fsp4HI GCNGC 2 cut(s) 287, 780
FspBI CTAG 2 cut(s) 800, 1286
GluI GCNGC 2 cut(s) 287, 780
GsuI CTGGAG 1 cut(s) 1363
HaeIII GGCC 1 cut(s) 839
HapII CCGG 2 cut(s) 350, 1359
HgaI GACGC 2 cut(s) 646, 1398
Hin1II CATG 4 cut(s) 174, 436, 710, 1201
HinfI GANTC 3 cut(s) 1306, 1390, 1463
HpaII CCGG 2 cut(s) 350, 1359
HphI GGTGA 5 cut(s) 514, 625, 654, 686, 983
Hpy166II GTNNAC 4 cut(s) 122, 347, 895, 1433
Hpy188I TCNGA 5 cut(s) 87, 670, 821, 917, 1212
Hpy188III TCNNGA 8 cut(s) 266, 566, 575, 731, 1089, 1136, 1335, 1380
Hpy8I GTNNAC 4 cut(s) 122, 347, 895, 1433
HpyAV CCTTC 3 cut(s) 665, 707, 972
HpyF10VI GCNNNNNNNGC 3 cut(s) 24, 353, 1286
HpyF3I CTNAG 1 cut(s) 1318
Hsp92II CATG 4 cut(s) 174, 436, 710, 1201
Kzo9I GATC 4 cut(s) 366, 722, 1179, 1194
LmnI GCTCC 2 cut(s) 219, 1072
Lsp1109I GCAGC 2 cut(s) 273, 791
LweI GCATC 7 cut(s) 58, 319, 535, 843, 1138, 1192, 1396
MaeI CTAG 2 cut(s) 800, 1286
MaeIII GTNAC 2 cut(s) 194, 880
MalI GATC 4 cut(s) 368, 724, 1181, 1196
MboI GATC 4 cut(s) 366, 722, 1179, 1194
MboII GAAGA 8 cut(s) 361, 416, 965, 1091, 1121, 1151, 1273, 1311
MfeI CAATTG 2 cut(s) 906, 1152
MflI RGATCY 1 cut(s) 366
MhlI GDGCHC 2 cut(s) 349, 492
MmeI TCCRAC 3 cut(s) 422, 813, 844
Mph1103I ATGCAT 1 cut(s) 73
MseI TTAA 7 cut(s) 702, 747, 1007, 1029, 1164, 1188, 1386
MslI CAYNNNNRTG 4 cut(s) 201, 1164, 1196, 1417
MspI CCGG 2 cut(s) 350, 1359
MspR9I CCNGG 2 cut(s) 1248, 1359
MunI CAATTG 2 cut(s) 906, 1152
Mva1269I GAATGC 1 cut(s) 1098
MvaI CCWGG 1 cut(s) 1248
MwoI GCNNNNNNNGC 3 cut(s) 24, 353, 1286
NciI CCSGG 1 cut(s) 1359
NcoI CCATGG 1 cut(s) 170
NdeII GATC 4 cut(s) 366, 722, 1179, 1194
NheI GCTAGC 1 cut(s) 1285
NlaIII CATG 4 cut(s) 174, 436, 710, 1201
NlaIV GGNNCC 3 cut(s) 159, 1074, 1491
NmuCI GTSAC 2 cut(s) 194, 880
NsiI ATGCAT 1 cut(s) 73
NspI RCATGY 1 cut(s) 436
PceI AGGCCT 1 cut(s) 839
PcsI WCGNNNNNNNCGW 1 cut(s) 1119
PctI GAATGC 1 cut(s) 1098
PfeI GAWTC 3 cut(s) 1306, 1390, 1463
PkrI GCNGC 2 cut(s) 288, 781
PpuMI RGGWCCY 1 cut(s) 263
Psp5II RGGWCCY 1 cut(s) 263
Psp6I CCWGG 1 cut(s) 1246
PspGI CCWGG 1 cut(s) 1246
PspN4I GGNNCC 3 cut(s) 159, 1074, 1491
PspPI GGNCC 3 cut(s) 263, 716, 1244
PspPPI RGGWCCY 1 cut(s) 263
PsrI GAACNNNNNNTAC 2 cut(s) 1107, 1139
PsuI RGATCY 1 cut(s) 366
RsaI GTAC 6 cut(s) 111, 239, 896, 1017, 1125, 1458
RsaNI GTAC 6 cut(s) 110, 238, 895, 1016, 1124, 1457
RseI CAYNNNNRTG 4 cut(s) 201, 1164, 1196, 1417
SaqAI TTAA 7 cut(s) 702, 747, 1007, 1029, 1164, 1188, 1386
SatI GCNGC 2 cut(s) 287, 780
Sau3AI GATC 4 cut(s) 366, 722, 1179, 1194
Sau96I GGNCC 3 cut(s) 263, 716, 1244
ScaI AGTACT 2 cut(s) 239, 1017
ScrFI CCNGG 2 cut(s) 1248, 1359
SduI GDGCHC 2 cut(s) 349, 492
SfaNI GCATC 7 cut(s) 58, 319, 535, 843, 1138, 1192, 1396
SinI GGWCC 3 cut(s) 263, 716, 1244
SmiI ATTTAAAT 1 cut(s) 1008
SmiMI CAYNNNNRTG 4 cut(s) 201, 1164, 1196, 1417
SmlI CTYRAG 2 cut(s) 281, 1134
SmoI CTYRAG 2 cut(s) 281, 1134
SseBI AGGCCT 1 cut(s) 839
SsiI CCGC 1 cut(s) 1362
SspI AATATT 1 cut(s) 475
SspMI CTAG 2 cut(s) 800, 1286
StuI AGGCCT 1 cut(s) 839
StyD4I CCNGG 2 cut(s) 1246, 1357
StyI CCWWGG 2 cut(s) 170, 1097
SwaI ATTTAAAT 1 cut(s) 1008
TaqI TCGA 4 cut(s) 532, 565, 1466, 1504
TatI WGTACW 3 cut(s) 237, 894, 1015
TfiI GAWTC 3 cut(s) 1306, 1390, 1463
Tru1I TTAA 7 cut(s) 702, 747, 1007, 1029, 1164, 1188, 1386
Tru9I TTAA 7 cut(s) 702, 747, 1007, 1029, 1164, 1188, 1386
TscAI CASTG 2 cut(s) 58, 830
TseFI GTSAC 2 cut(s) 194, 880
TseI GCWGC 2 cut(s) 286, 779
Tsp45I GTSAC 2 cut(s) 194, 880
TspDTI ATGAA 6 cut(s) 17, 324, 398, 474, 954, 1319
TspGWI ACGGA 2 cut(s) 1085, 1111
TspRI CASTG 2 cut(s) 58, 830
VneI GTGCAC 1 cut(s) 345
VpaK11BI GGWCC 3 cut(s) 263, 716, 1244
XapI RAATTY 7 cut(s) 46, 374, 570, 606, 680, 932, 1084
XceI RCATGY 1 cut(s) 436
XcmI CCANNNNNNNNNTGG 1 cut(s) 532
XmiI GTMKAC 1 cut(s) 121
XspI CTAG 2 cut(s) 800, 1286
ZrmI AGTACT 2 cut(s) 239, 1017
Zsp2I ATGCAT 1 cut(s) 73
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.