Prupe.2G278400_v2.0.a1

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000139
Physical Location & Seq
Reverse (-)
27889544 .. 27892576
3033 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G278400.1

Sequence Viewer

Length: 1227 bp
ATGTCGACGAAGAAGCTCCACCACAACCGCCACCTTCCTGAAGAAATTGTAGTCCAAATTCTGTGCCGGTTGCCGATACAACCTCTGATTCGATTCAGTTCCGTTTCGGAACGGTGGCATTCTCTCATAATTGAGGACCCACAGTTTGCCCAATCCCACTTCAAGCTAGCCTCCGATCGCAAAACCCTCACCCAGAGACTCCTCATCTCCACCGACTATCAACTCCGATCCTTGGACCCGGAAACGCCGTCGTTCGCAGACAACAATTCTTCGCTCAATAATCTCACCTTCGCCCACTTTAGCAACCTACTGGGCTGCTGTAATGGTTTGGTATGTGTAGATGTTGATGGTTATGAAAAACATGACTTGTCTCTCTGGAATCCATCAACCGGATTCAAACGCGAATTGCCCGACTCAGATTTTGTATGTGCAGTGAAAAACCTGTCTCGTTTCGCTGAATCTGATATTGGCCGTTCTGGCCTGGGTTATGTGTCATCCACTGACGACTACAAAATCTTCATAGATGCTGATGTTTATACTAGACCTTCCCAGACGTTTATGGAGATTTACTCATCCAGATTGAACTCTTGGAAACCCATTCACGTCCGTGAGCACGACCCACCGTGCTCTTTCAGAAGCCCCACCACCACTGGCTTGGGGGCCCTTACAAATGAAGCACTGCATTGGTTCTACCGCAAAGTCGGTGAGGTGGAGCCAACGATCCTTGCTTTTGATCTGGCAAAGGAGGAGTTCAGGGAAGTTCCATTCCCCACTTTTGATGGTGATGCCGATGACGTTGATGTTCATGACATGGGGGTTCAAGTAGTTTCAAGAGGAGGAGGAGAATGCCTCTGTGTTTCGATTGCTAGGAGACGTGGTGGCGTTAATTTCATGGAATTCTGGGTTATGAGAGAATATGGGGTGGGTGAATCTTGGTCTATGCTCTTCAAATTTAACACGGATCATGTATTTGAATCGGTGGGTGGGAATTTGTGCGGTTATGAAGCCATTTTCGTTACCGAAGGTGGTACAGTTATATTCAGGTTGAGGTTTAGGGACAGGTTGGTAAGGATTGAATGCCGCAGAGAAGCGGAGCCGGTTTGCAGTACCCCATTTAACGTTAATGATGGGGATGGACCAGTGTACGACGTGATTCCATACAATGAAACTCTGTTTTCGGTACCTAAACTCGGGTTGCATGAAATGAATGAAGCAGATGTTTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

409

Amino Acids

46.31

Weight (kDa)

5.23

Isoelectric Point (pI)

41.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1180
AccB1I GGYRCC 1 cut(s) 1180
AccI GTMKAC 1 cut(s) 5
AccII CGCG 1 cut(s) 402
AciI CCGC 5 cut(s) 28, 694, 996, 1081, 1091
AclI AACGTT 1 cut(s) 1119
AclWI GGATC 3 cut(s) 222, 715, 969
AcoI YGGCCR 1 cut(s) 469
AcsI RAATTY 4 cut(s) 57, 896, 950, 988
AcuI CTGAAG 1 cut(s) 60
AfaI GTAC 4 cut(s) 1030, 1108, 1145, 1182
AfiI CCNNNNNNNGG 3 cut(s) 232, 389, 1190
AgsI TTSAA 8 cut(s) 163, 397, 583, 821, 831, 949, 974, 1076
AjiI CACGTC 3 cut(s) 604, 875, 1150
AjnI CCWGG 1 cut(s) 480
AjuI GAANNNNNNNTTGG 2 cut(s) 450, 482
AleI CACNNNNGTG 1 cut(s) 606
AluBI AGCT 2 cut(s) 16, 166
AluI AGCT 2 cut(s) 16, 166
Alw21I GWGCWC 2 cut(s) 615, 629
Alw26I GTCTC 4 cut(s) 190, 375, 450, 865
AlwI GGATC 3 cut(s) 222, 715, 969
Ama87I CYCGRG 1 cut(s) 1190
AoxI GGCC 3 cut(s) 469, 478, 660
ApaI GGGCCC 1 cut(s) 664
ApeKI GCWGC 1 cut(s) 315
ApoI RAATTY 4 cut(s) 57, 896, 950, 988
ArsI GACNNNNNNTTYG 4 cut(s) 128, 160, 404, 436
Asp718I GGTACC 1 cut(s) 1180
AspS9I GGNCC 5 cut(s) 136, 235, 660, 661, 1136
AsuC2I CCSGG 1 cut(s) 239
AsuHPI GGTGA 5 cut(s) 181, 277, 716, 794, 938
AsuNHI GCTAGC 1 cut(s) 166
AvaI CYCGRG 1 cut(s) 1190
AvaII GGWCC 3 cut(s) 136, 235, 1136
BaeGI GKGCMC 1 cut(s) 664
BanI GGYRCC 1 cut(s) 1180
BanII GRGCYC 1 cut(s) 664
Bbv12I GWGCWC 2 cut(s) 615, 629
BbvI GCAGC 1 cut(s) 302
BccI CCATC 5 cut(s) 341, 391, 773, 1121, 1127
BceAI ACGGC 2 cut(s) 232, 456
BciT130I CCWGG 1 cut(s) 482
BcnI CCSGG 1 cut(s) 239
BcoDI GTCTC 4 cut(s) 190, 375, 450, 865
BfaI CTAG 3 cut(s) 167, 540, 867
BglI GCCNNNNNGGC 1 cut(s) 477
BisI GCNGC 2 cut(s) 316, 1081
BlsI GCNGC 2 cut(s) 317, 1082
Bme1390I CCNGG 2 cut(s) 239, 482
Bme18I GGWCC 3 cut(s) 136, 235, 1136
BmeT110I CYCGRG 1 cut(s) 1190
BmgBI CACGTC 3 cut(s) 604, 875, 1150
BmgT120I GGNCC 5 cut(s) 136, 235, 660, 661, 1136
BmiI GGNNCC 7 cut(s) 138, 237, 661, 662, 714, 1095, 1182
BmrFI CCNGG 2 cut(s) 239, 482
BmrI ACTGGG 1 cut(s) 320
BmsI GCATC 2 cut(s) 514, 775
BmtI GCTAGC 1 cut(s) 170
BmuI ACTGGG 1 cut(s) 320
BplI GAGNNNNNCTC 4 cut(s) 554, 586, 834, 866
BpuMI CCSGG 1 cut(s) 239
BsaJI CCNNGG 2 cut(s) 231, 481
BsaWI WCCGGW 1 cut(s) 389
BsaXI ACNNNNNCTCC 2 cut(s) 862, 892
Bsc4I CCNNNNNNNGG 3 cut(s) 232, 389, 1190
Bse118I RCCGGY 2 cut(s) 66, 1096
Bse1I ACTGG 3 cut(s) 315, 655, 1139
BseBI CCWGG 1 cut(s) 482
BseDI CCNNGG 2 cut(s) 231, 481
BseGI GGATG 3 cut(s) 494, 572, 1138
BseLI CCNNNNNNNGG 3 cut(s) 232, 389, 1190
BseMII CTCAG 1 cut(s) 429
BseNI ACTGG 3 cut(s) 315, 655, 1139
BseRI GAGGAG 5 cut(s) 191, 761, 849, 852, 855
BseSI GKGCMC 1 cut(s) 664
BseXI GCAGC 1 cut(s) 302
BsgI GTGCAG 1 cut(s) 450
Bsh1236I CGCG 1 cut(s) 402
Bsh1285I CGRYCG 1 cut(s) 178
BshFI GGCC 3 cut(s) 471, 480, 662
BshNI GGYRCC 1 cut(s) 1180
BsiEI CGRYCG 1 cut(s) 178
BsiHKAI GWGCWC 2 cut(s) 615, 629
BsiHKCI CYCGRG 1 cut(s) 1190
BsiSI CCGG 4 cut(s) 67, 239, 390, 1097
BslFI GGGAC 1 cut(s) 1070
BslI CCNNNNNNNGG 3 cut(s) 232, 389, 1190
BsmAI GTCTC 4 cut(s) 190, 375, 450, 865
BsmBI CGTCTC 1 cut(s) 865
BsmFI GGGAC 1 cut(s) 1070
BsmI GAATGC 3 cut(s) 118, 851, 1082
BsnI GGCC 3 cut(s) 471, 480, 662
BsoBI CYCGRG 1 cut(s) 1190
Bsp120I GGGCCC 1 cut(s) 660
Bsp1286I GDGCHC 3 cut(s) 615, 629, 664
Bsp143I GATC 5 cut(s) 175, 227, 720, 733, 961
BspACI CCGC 5 cut(s) 28, 694, 996, 1081, 1091
BspANI GGCC 3 cut(s) 471, 480, 662
BspCNI CTCAG 1 cut(s) 428
BspFNI CGCG 1 cut(s) 402
BspHI TCATGA 1 cut(s) 805
BspLI GGNNCC 7 cut(s) 138, 237, 661, 662, 714, 1095, 1182
BspOI GCTAGC 1 cut(s) 170
BspPI GGATC 3 cut(s) 222, 715, 969
BspQI GCTCTTC 1 cut(s) 950
BspT107I GGYRCC 1 cut(s) 1180
BsrFI RCCGGY 2 cut(s) 66, 1096
BsrI ACTGG 3 cut(s) 315, 655, 1139
BssAI RCCGGY 2 cut(s) 66, 1096
BssECI CCNNGG 2 cut(s) 231, 481
BssMI GATC 5 cut(s) 175, 227, 720, 733, 961
BssT1I CCWWGG 1 cut(s) 231
Bst2UI CCWGG 1 cut(s) 482
Bst4CI ACNGT 4 cut(s) 114, 144, 624, 1033
Bst6I CTCTTC 1 cut(s) 950
BstC8I GCNNGC 1 cut(s) 168
BstDEI CTNAG 2 cut(s) 415, 1224
BstF5I GGATG 3 cut(s) 494, 572, 1138
BstFNI CGCG 1 cut(s) 402
BstKTI GATC 5 cut(s) 178, 230, 723, 736, 964
BstMAI GTCTC 4 cut(s) 190, 375, 450, 865
BstMBI GATC 5 cut(s) 175, 227, 720, 733, 961
BstMCI CGRYCG 1 cut(s) 178
BstMWI GCNNNNNNNGC 1 cut(s) 477
BstNI CCWGG 1 cut(s) 482
BstSCI CCNGG 2 cut(s) 237, 480
BstSLI GKGCMC 1 cut(s) 664
BstUI CGCG 1 cut(s) 402
BstV1I GCAGC 1 cut(s) 302
BstXI CCANNNNNNTGG 1 cut(s) 655
BsuRI GGCC 3 cut(s) 471, 480, 662
BtrI CACGTC 3 cut(s) 604, 875, 1150
BtsCI GGATG 3 cut(s) 494, 572, 1138
BtsI GCAGTG 2 cut(s) 438, 677
BtsIMutI CAGTG 5 cut(s) 438, 498, 648, 677, 1146
Cac8I GCNNGC 1 cut(s) 168
CciI TCATGA 1 cut(s) 805
Cfr10I RCCGGY 2 cut(s) 66, 1096
Cfr13I GGNCC 5 cut(s) 136, 235, 660, 661, 1136
Csp6I GTAC 4 cut(s) 1029, 1107, 1144, 1181
CviAII CATG 6 cut(s) 362, 806, 811, 892, 965, 1199
CviQI GTAC 4 cut(s) 1029, 1107, 1144, 1181
DdeI CTNAG 2 cut(s) 415, 1224
DpnI GATC 5 cut(s) 177, 229, 722, 735, 963
DpnII GATC 5 cut(s) 175, 227, 720, 733, 961
EaeI YGGCCR 1 cut(s) 469
Eam1104I CTCTTC 1 cut(s) 950
EarI CTCTTC 1 cut(s) 950
Eco130I CCWWGG 1 cut(s) 231
Eco24I GRGCYC 1 cut(s) 664
Eco47I GGWCC 3 cut(s) 136, 235, 1136
Eco57I CTGAAG 1 cut(s) 60
Eco88I CYCGRG 1 cut(s) 1190
EcoO109I RGGNCCY 3 cut(s) 136, 660, 661
EcoRI GAATTC 1 cut(s) 896
EcoRII CCWGG 1 cut(s) 480
EcoT14I CCWWGG 1 cut(s) 231
EcoT38I GRGCYC 1 cut(s) 664
ErhI CCWWGG 1 cut(s) 231
Esp3I CGTCTC 1 cut(s) 865
FaeI CATG 6 cut(s) 365, 809, 814, 895, 968, 1202
FaqI GGGAC 1 cut(s) 1070
FatI CATG 6 cut(s) 361, 805, 810, 891, 964, 1198
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 2 cut(s) 316, 1081
FokI GGATG 3 cut(s) 481, 559, 1145
FriOI GRGCYC 1 cut(s) 664
Fsp4HI GCNGC 2 cut(s) 316, 1081
FspBI CTAG 3 cut(s) 167, 540, 867
GluI GCNGC 2 cut(s) 316, 1081
HaeIII GGCC 3 cut(s) 471, 480, 662
HapII CCGG 4 cut(s) 67, 239, 390, 1097
Hin1II CATG 6 cut(s) 365, 809, 814, 895, 968, 1202
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HpaII CCGG 4 cut(s) 67, 239, 390, 1097
HphI GGTGA 5 cut(s) 181, 277, 716, 794, 938
Hpy166II GTNNAC 2 cut(s) 6, 1144
Hpy188I TCNGA 7 cut(s) 87, 109, 175, 227, 418, 463, 635
Hpy188III TCNNGA 5 cut(s) 38, 376, 576, 806, 831
Hpy8I GTNNAC 2 cut(s) 6, 1144
Hpy99I CGWCG 3 cut(s) 10, 253, 1151
HpyAV CCTTC 4 cut(s) 44, 298, 555, 1016
HpyCH4III ACNGT 4 cut(s) 114, 144, 624, 1033
HpyCH4IV ACGT 6 cut(s) 554, 603, 795, 874, 1119, 1149
HpyCH4V TGCA 4 cut(s) 431, 682, 1104, 1198
HpyF10VI GCNNNNNNNGC 1 cut(s) 477
HpyF3I CTNAG 2 cut(s) 415, 1224
HpySE526I ACGT 6 cut(s) 554, 603, 795, 874, 1119, 1149
Hsp92II CATG 6 cut(s) 365, 809, 814, 895, 968, 1202
KpnI GGTACC 1 cut(s) 1184
Kzo9I GATC 5 cut(s) 175, 227, 720, 733, 961
LguI GCTCTTC 1 cut(s) 950
LmnI GCTCC 3 cut(s) 21, 712, 1093
Lsp1109I GCAGC 1 cut(s) 302
LweI GCATC 2 cut(s) 514, 775
MaeI CTAG 3 cut(s) 167, 540, 867
MaeII ACGT 6 cut(s) 554, 603, 795, 874, 1119, 1149
MaeIII GTNAC 1 cut(s) 1015
MalI GATC 5 cut(s) 177, 229, 722, 735, 963
MboI GATC 5 cut(s) 175, 227, 720, 733, 961
MboII GAAGA 5 cut(s) 22, 53, 261, 508, 937
MhlI GDGCHC 3 cut(s) 615, 629, 664
MluCI AATT 9 cut(s) 45, 57, 129, 265, 404, 886, 896, 950, 988
MlyI GAGTC 2 cut(s) 192, 407
MseI TTAA 4 cut(s) 885, 954, 1116, 1122
MslI CAYNNNNRTG 1 cut(s) 606
MspI CCGG 4 cut(s) 67, 239, 390, 1097
MspR9I CCNGG 2 cut(s) 239, 482
Mva1269I GAATGC 3 cut(s) 118, 851, 1082
MvaI CCWGG 1 cut(s) 482
MvnI CGCG 1 cut(s) 402
MwoI GCNNNNNNNGC 1 cut(s) 477
NciI CCSGG 1 cut(s) 239
NdeII GATC 5 cut(s) 175, 227, 720, 733, 961
NheI GCTAGC 1 cut(s) 166
NlaIII CATG 6 cut(s) 365, 809, 814, 895, 968, 1202
NlaIV GGNNCC 7 cut(s) 138, 237, 661, 662, 714, 1095, 1182
OliI CACNNNNGTG 1 cut(s) 606
PagI TCATGA 1 cut(s) 805
PciSI GCTCTTC 1 cut(s) 950
PctI GAATGC 3 cut(s) 118, 851, 1082
PfeI GAWTC 8 cut(s) 88, 93, 379, 393, 458, 929, 974, 1153
PkrI GCNGC 2 cut(s) 317, 1082
Ple19I CGATCG 1 cut(s) 178
PleI GAGTC 2 cut(s) 192, 407
PpsI GAGTC 2 cut(s) 192, 407
PpuMI RGGWCCY 1 cut(s) 136
Psp1406I AACGTT 1 cut(s) 1119
Psp5II RGGWCCY 1 cut(s) 136
Psp6I CCWGG 1 cut(s) 480
PspGI CCWGG 1 cut(s) 480
PspN4I GGNNCC 7 cut(s) 138, 237, 661, 662, 714, 1095, 1182
PspOMI GGGCCC 1 cut(s) 660
PspPI GGNCC 5 cut(s) 136, 235, 660, 661, 1136
PspPPI RGGWCCY 1 cut(s) 136
PvuI CGATCG 1 cut(s) 178
RsaI GTAC 4 cut(s) 1030, 1108, 1145, 1182
RsaNI GTAC 4 cut(s) 1029, 1107, 1144, 1181
RseI CAYNNNNRTG 1 cut(s) 606
SalI GTCGAC 1 cut(s) 4
SapI GCTCTTC 1 cut(s) 950
SaqAI TTAA 4 cut(s) 885, 954, 1116, 1122
SatI GCNGC 2 cut(s) 316, 1081
Sau3AI GATC 5 cut(s) 175, 227, 720, 733, 961
Sau96I GGNCC 5 cut(s) 136, 235, 660, 661, 1136
SchI GAGTC 2 cut(s) 192, 407
ScrFI CCNGG 2 cut(s) 239, 482
SduI GDGCHC 3 cut(s) 615, 629, 664
SfaNI GCATC 2 cut(s) 514, 775
SfiI GGCCNNNNNGGCC 1 cut(s) 477
SinI GGWCC 3 cut(s) 136, 235, 1136
SmiMI CAYNNNNRTG 1 cut(s) 606
Sse9I AATT 9 cut(s) 45, 57, 129, 265, 404, 886, 896, 950, 988
SsiI CCGC 5 cut(s) 28, 694, 996, 1081, 1091
SspMI CTAG 3 cut(s) 167, 540, 867
StyD4I CCNGG 2 cut(s) 237, 480
StyI CCWWGG 1 cut(s) 231
TaaI ACNGT 4 cut(s) 114, 144, 624, 1033
TaiI ACGT 6 cut(s) 557, 606, 798, 877, 1122, 1152
TaqI TCGA 3 cut(s) 5, 91, 860
TasI AATT 9 cut(s) 45, 57, 129, 265, 404, 886, 896, 950, 988
TauI GCSGC 1 cut(s) 1083
TfiI GAWTC 8 cut(s) 88, 93, 379, 393, 458, 929, 974, 1153
Tru1I TTAA 4 cut(s) 885, 954, 1116, 1122
Tru9I TTAA 4 cut(s) 885, 954, 1116, 1122
TscAI CASTG 5 cut(s) 438, 505, 655, 684, 1146
TseI GCWGC 1 cut(s) 315
TspGWI ACGGA 3 cut(s) 91, 596, 974
TspRI CASTG 5 cut(s) 438, 505, 655, 684, 1146
VpaK11BI GGWCC 3 cut(s) 136, 235, 1136
XapI RAATTY 4 cut(s) 57, 896, 950, 988
XcmI CCANNNNNNNNNTGG 1 cut(s) 652
XmiI GTMKAC 1 cut(s) 5
XspI CTAG 3 cut(s) 167, 540, 867
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.