Rorug05G0445100

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000139
Physical Location & Seq
Reverse (-)
61634036 .. 61635844
1809 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0445100.1

Sequence Viewer

Length: 1407 bp
ATGGAGTTTCTGAGTTTACTCTATGCTTTCTCAGCTTTGTATTTCATTTTCACTTTGTGGAAGCGTTATGATGAGAAAAGAGACCAACAATGTTACATCTTGGACTACCAATGCCACAAGCCCACAGATGACAGAAAGCTTAACACACAGTATTCAGGGGAGATCATCAAGAGGACCAAGAATTTGGGTCTTCTAGAGTACCAGTTCCTCCTCAAAGCCATAGTGAGCTCCGGCATTGGCGAGCAAACCTACGCGCCGAGGATCATGTTTGACGGCAGGGAATCATGTCCCACATTGGAAGATTCAATCACAGAGATGGAGGAGTTCTTCCATGACAGCATTCAGAAGGTGTTGGACAGACAAGGCCTTTCCCCTTCACAAATTGATGTGCTTGTGGTCAATGTGTCAATGTTTGCTTCTGTGCCTTCTTTAGCCTCAAGGATTATAAACCACTACAAGATGAGAGAGGACATAAAGGTCTATAACCTCAGCGGAATGGGTTGCTCAGCTAGCCTAATCTCAGTTGGCATAGTCAGGAGCATTTTCAAGTCAAACAAGAATATTTATGCACTTGTGGTCACTTCAGAGTCTCTGAGCCCCAATTGGTACACAGGTAATGCCAGATCCATGATTCTTGCAAATTGTTTGTTTAGGTCTGGTGGCTGTGCTATCATTTTGACTAACAAATGGGCCTTGAAAAACCAAGCCATGTTCAAACTGAACTGTTTGGTTAGAACCCATCATGGGGCCAAAGATGAGTCCTATGGTTGTTGCATACAACAAGAAGATGAGCAGGGGAGGCTTGGGTTTCACCTCGCCAAGATTTTGCCCAAGGCTGCCACAAGAGCTTTTGTGGACAACCTTAGGGAAATTTCTCCCAAGATCTTGCCCATCAGGGAGTTGGTTAGGTTTATGCTTGCAACCCTTTTGAGGAAATTGAGAGAAAGGAGCAGCTCATCCTCTAAGGGATTAGGGACTTCTCCCCCAAAACCTGTGATAGATTTCAAAACTGGGGTTGATCACTTCTGCATTCACACCGGCGGAAAGGCGGTGATAGATGGAATTGGCAAGAGTCTTGGCCTCACTGAACATGACCTTGAGCCTGCAAGGATGACACTCCACAGGTTTGGGAATACTTCTGCAAGTAGTCTCTGGTATGTCTTGGCTTACATGGAGGCCAAGAAGAGGCTCAAGAAGGGTGATACAGTGTTGATGATAAGCTTTGGTGCTGGCTTTAAATGCAACAGCTGTTTTCTGGAGGTGGTGAGGGATTTGGAGGATGGCAATGTCTGGAAAGAGGAAATTGCTATGTACCCACCAAAGTCCTTGACCAACCCTTTCATGGAGAAATTTGGTTGGCTCCAACAAGAGGACCCAAGCACATTCAAGCTTGAAGATTTTCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

468

Amino Acids

53.05

Weight (kDa)

8.75

Isoelectric Point (pI)

44.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAE1_CUT1_RppA PF08392 25 - 312 9.1e-116 FAE1/Type III polyketide synthase-like protein
ACP_syn_III_C PF08541 339 - 420 5.4e-15 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Chal_sti_synt_C PF02797 342 - 420 3.6e-09 Chalcone and stilbene synthases, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 446
AasI GACNNNNNNGTC 1 cut(s) 476
AccII CGCG 1 cut(s) 254
AciI CCGC 3 cut(s) 492, 1041, 1049
AclWI GGATC 2 cut(s) 269, 618
AcsI RAATTY 3 cut(s) 181, 870, 1349
AcuI CTGAAG 1 cut(s) 567
AdeI CACNNNGTG 1 cut(s) 57
AfaI GTAC 3 cut(s) 200, 608, 1313
AfiI CCNNNNNNNGG 6 cut(s) 744, 745, 930, 1185, 1342, 1369
AgsI TTSAA 7 cut(s) 306, 547, 697, 715, 1006, 1387, 1394
AluBI AGCT 9 cut(s) 35, 139, 228, 509, 848, 954, 1221, 1248, 1390
AluI AGCT 9 cut(s) 35, 139, 228, 509, 848, 954, 1221, 1248, 1390
Alw21I GWGCWC 1 cut(s) 230
Alw26I GTCTC 3 cut(s) 75, 594, 1154
AlwI GGATC 2 cut(s) 269, 618
AoxI GGCC 5 cut(s) 364, 690, 747, 1078, 1176
ApeKI GCWGC 2 cut(s) 836, 951
ApoI RAATTY 3 cut(s) 181, 870, 1349
ArsI GACNNNNNNTTYG 2 cut(s) 166, 198
Asp700I GAANNNNTTC 1 cut(s) 1398
AspLEI GCGC 1 cut(s) 256
AspS9I GGNCC 4 cut(s) 174, 690, 747, 1372
AsuHPI GGTGA 4 cut(s) 803, 1063, 1211, 1276
AsuNHI GCTAGC 1 cut(s) 509
AvaII GGWCC 2 cut(s) 174, 1372
AxyI CCTNAGG 1 cut(s) 863
BaeI ACNNNNGTAYC 2 cut(s) 598, 631
BanII GRGCYC 2 cut(s) 230, 599
BbsI GAAGAC 1 cut(s) 182
Bbv12I GWGCWC 1 cut(s) 230
BbvCI CCTCAGC 1 cut(s) 488
BbvI GCAGC 2 cut(s) 823, 963
BccI CCATC 5 cut(s) 310, 747, 899, 1052, 1274
BceAI ACGGC 1 cut(s) 289
BclI TGATCA 1 cut(s) 1018
BcoDI GTCTC 3 cut(s) 75, 594, 1154
BfaI CTAG 2 cut(s) 194, 510
BglII AGATCT 1 cut(s) 882
BisI GCNGC 2 cut(s) 837, 952
BlpI GCTNAGC 1 cut(s) 505
BlsI GCNGC 2 cut(s) 838, 953
Bme18I GGWCC 2 cut(s) 174, 1372
BmgT120I GGNCC 4 cut(s) 174, 690, 747, 1372
BmiI GGNNCC 3 cut(s) 748, 1361, 1374
BmrI ACTGGG 1 cut(s) 1020
BmtI GCTAGC 1 cut(s) 513
BmuI ACTGGG 1 cut(s) 1020
BpiI GAAGAC 1 cut(s) 182
BpmI CTGGAG 1 cut(s) 1277
Bpu10I CCTNAGC 1 cut(s) 488
Bpu1102I GCTNAGC 1 cut(s) 505
BpuEI CTTGAG 3 cut(s) 421, 1118, 1175
BsaI GGTCTC 1 cut(s) 75
BsaJI CCNNGG 2 cut(s) 257, 831
Bsc4I CCNNNNNNNGG 6 cut(s) 744, 745, 930, 1185, 1342, 1369
Bse118I RCCGGY 1 cut(s) 1037
Bse1I ACTGG 2 cut(s) 202, 1015
Bse21I CCTNAGG 1 cut(s) 863
Bse3DI GCAATG 1 cut(s) 1291
BseDI CCNNGG 2 cut(s) 257, 831
BseGI GGATG 3 cut(s) 956, 1116, 1285
BseLI CCNNNNNNNGG 6 cut(s) 744, 745, 930, 1185, 1342, 1369
BseMI GCAATG 1 cut(s) 1291
BseMII CTCAG 5 cut(s) 45, 502, 519, 534, 584
BseNI ACTGG 2 cut(s) 202, 1015
BseRI GAGGAG 2 cut(s) 200, 335
BseXI GCAGC 2 cut(s) 823, 963
Bsh1236I CGCG 1 cut(s) 254
BshFI GGCC 5 cut(s) 366, 692, 749, 1080, 1178
BsiHKAI GWGCWC 1 cut(s) 230
BsiSI CCGG 2 cut(s) 231, 1038
BslFI GGGAC 2 cut(s) 273, 988
BslI CCNNNNNNNGG 6 cut(s) 744, 745, 930, 1185, 1342, 1369
BsmAI GTCTC 3 cut(s) 75, 594, 1154
BsmFI GGGAC 2 cut(s) 273, 988
BsmI GAATGC 2 cut(s) 339, 1029
BsnI GGCC 5 cut(s) 366, 692, 749, 1080, 1178
Bso31I GGTCTC 1 cut(s) 75
Bsp1286I GDGCHC 2 cut(s) 230, 599
Bsp143I GATC 5 cut(s) 162, 261, 623, 882, 1018
Bsp1720I GCTNAGC 1 cut(s) 505
BspACI CCGC 3 cut(s) 492, 1041, 1049
BspANI GGCC 5 cut(s) 366, 692, 749, 1080, 1178
BspCNI CTCAG 5 cut(s) 44, 501, 518, 533, 585
BspFNI CGCG 1 cut(s) 254
BspLI GGNNCC 3 cut(s) 748, 1361, 1374
BspOI GCTAGC 1 cut(s) 513
BspPI GGATC 2 cut(s) 269, 618
BspTNI GGTCTC 1 cut(s) 75
BsrDI GCAATG 1 cut(s) 1291
BsrFI RCCGGY 1 cut(s) 1037
BsrI ACTGG 2 cut(s) 202, 1015
BssAI RCCGGY 1 cut(s) 1037
BssECI CCNNGG 2 cut(s) 257, 831
BssMI GATC 5 cut(s) 162, 261, 623, 882, 1018
BssT1I CCWWGG 1 cut(s) 831
Bst4CI ACNGT 3 cut(s) 150, 725, 1207
Bst6I CTCTTC 1 cut(s) 1178
BstC8I GCNNGC 5 cut(s) 242, 511, 918, 1104, 1231
BstDEI CTNAG 8 cut(s) 11, 31, 488, 505, 520, 593, 863, 963
BstF5I GGATG 3 cut(s) 956, 1116, 1285
BstFNI CGCG 1 cut(s) 254
BstHHI GCGC 1 cut(s) 256
BstKTI GATC 5 cut(s) 165, 264, 626, 885, 1021
BstMAI GTCTC 3 cut(s) 75, 594, 1154
BstMBI GATC 5 cut(s) 162, 261, 623, 882, 1018
BstMWI GCNNNNNNNGC 5 cut(s) 32, 510, 799, 845, 1239
BstUI CGCG 1 cut(s) 254
BstV1I GCAGC 2 cut(s) 823, 963
BstV2I GAAGAC 1 cut(s) 182
BstX2I RGATCY 2 cut(s) 623, 882
BstXI CCANNNNNNTGG 2 cut(s) 184, 1127
BstYI RGATCY 2 cut(s) 623, 882
Bsu36I CCTNAGG 1 cut(s) 863
BsuRI GGCC 5 cut(s) 366, 692, 749, 1080, 1178
BtsCI GGATG 3 cut(s) 956, 1116, 1285
BtsIMutI CAGTG 2 cut(s) 1083, 1212
Cac8I GCNNGC 5 cut(s) 242, 511, 918, 1104, 1231
CfoI GCGC 1 cut(s) 256
Cfr10I RCCGGY 1 cut(s) 1037
Cfr13I GGNCC 4 cut(s) 174, 690, 747, 1372
Csp6I GTAC 3 cut(s) 199, 607, 1312
CviAII CATG 9 cut(s) 265, 285, 332, 628, 709, 743, 1091, 1171, 1342
CviQI GTAC 3 cut(s) 199, 607, 1312
DdeI CTNAG 8 cut(s) 11, 31, 488, 505, 520, 593, 863, 963
DpnI GATC 5 cut(s) 164, 263, 625, 884, 1020
DpnII GATC 5 cut(s) 162, 261, 623, 882, 1018
DraI TTTAAA 1 cut(s) 1237
DraIII CACNNNGTG 1 cut(s) 57
DrdI GACNNNNNNGTC 1 cut(s) 476
DseDI GACNNNNNNGTC 1 cut(s) 476
Eam1104I CTCTTC 1 cut(s) 1178
EarI CTCTTC 1 cut(s) 1178
EciI GGCGGA 1 cut(s) 1056
Ecl136II GAGCTC 1 cut(s) 228
Eco130I CCWWGG 1 cut(s) 831
Eco147I AGGCCT 1 cut(s) 366
Eco24I GRGCYC 2 cut(s) 230, 599
Eco31I GGTCTC 1 cut(s) 75
Eco47I GGWCC 2 cut(s) 174, 1372
Eco53kI GAGCTC 1 cut(s) 228
Eco57I CTGAAG 1 cut(s) 567
Eco81I CCTNAGG 1 cut(s) 863
EcoICRI GAGCTC 1 cut(s) 228
EcoO109I RGGNCCY 1 cut(s) 1372
EcoT14I CCWWGG 1 cut(s) 831
EcoT38I GRGCYC 2 cut(s) 230, 599
ErhI CCWWGG 1 cut(s) 831
FaeI CATG 9 cut(s) 268, 288, 335, 631, 712, 746, 1094, 1174, 1345
FaqI GGGAC 2 cut(s) 273, 988
FatI CATG 9 cut(s) 264, 284, 331, 627, 708, 742, 1090, 1170, 1341
FbaI TGATCA 1 cut(s) 1018
Fnu4HI GCNGC 2 cut(s) 837, 952
FokI GGATG 3 cut(s) 943, 1123, 1292
FriOI GRGCYC 2 cut(s) 230, 599
Fsp4HI GCNGC 2 cut(s) 837, 952
FspBI CTAG 2 cut(s) 194, 510
GlaI GCGC 1 cut(s) 255
GluI GCNGC 2 cut(s) 837, 952
GsuI CTGGAG 1 cut(s) 1277
HaeIII GGCC 5 cut(s) 366, 692, 749, 1080, 1178
HapII CCGG 2 cut(s) 231, 1038
HhaI GCGC 1 cut(s) 256
Hin1II CATG 9 cut(s) 268, 288, 335, 631, 712, 746, 1094, 1174, 1345
Hin6I GCGC 1 cut(s) 254
HinP1I GCGC 1 cut(s) 254
HindIII AAGCTT 3 cut(s) 137, 1219, 1388
HinfI GANTC 6 cut(s) 281, 302, 587, 631, 758, 1072
HpaII CCGG 2 cut(s) 231, 1038
HphI GGTGA 4 cut(s) 803, 1063, 1211, 1276
Hpy166II GTNNAC 3 cut(s) 17, 609, 856
Hpy188I TCNGA 4 cut(s) 12, 345, 586, 594
Hpy188III TCNNGA 6 cut(s) 169, 194, 535, 1192, 1256, 1291
Hpy8I GTNNAC 3 cut(s) 17, 609, 856
HpyAV CCTTC 4 cut(s) 340, 384, 435, 1189
HpyCH4III ACNGT 3 cut(s) 150, 725, 1207
HpyCH4V TGCA 8 cut(s) 569, 638, 774, 920, 1029, 1106, 1142, 1242
HpyF10VI GCNNNNNNNGC 5 cut(s) 32, 510, 799, 845, 1239
HpyF3I CTNAG 8 cut(s) 11, 31, 488, 505, 520, 593, 863, 963
Hsp92II CATG 9 cut(s) 268, 288, 335, 631, 712, 746, 1094, 1174, 1345
HspAI GCGC 1 cut(s) 254
Ksp22I TGATCA 1 cut(s) 1018
Kzo9I GATC 5 cut(s) 162, 261, 623, 882, 1018
LmnI GCTCC 4 cut(s) 233, 537, 948, 1365
Lsp1109I GCAGC 2 cut(s) 823, 963
MaeI CTAG 2 cut(s) 194, 510
MaeIII GTNAC 2 cut(s) 92, 577
MalI GATC 5 cut(s) 164, 263, 625, 884, 1020
MboI GATC 5 cut(s) 162, 261, 623, 882, 1018
MboII GAAGA 6 cut(s) 182, 311, 319, 797, 1195, 1406
MfeI CAATTG 1 cut(s) 601
MflI RGATCY 2 cut(s) 623, 882
MhlI GDGCHC 2 cut(s) 230, 599
MluCI AATT 9 cut(s) 181, 381, 601, 640, 870, 935, 1062, 1302, 1349
MlyI GAGTC 3 cut(s) 596, 767, 1081
MmeI TCCRAC 2 cut(s) 333, 1387
MroXI GAANNNNTTC 1 cut(s) 1398
MseI TTAA 2 cut(s) 141, 1236
MslI CAYNNNNRTG 1 cut(s) 314
MspA1I CMGCKG 2 cut(s) 492, 1248
MspI CCGG 2 cut(s) 231, 1038
MunI CAATTG 1 cut(s) 601
Mva1269I GAATGC 2 cut(s) 339, 1029
MvnI CGCG 1 cut(s) 254
MwoI GCNNNNNNNGC 5 cut(s) 32, 510, 799, 845, 1239
NdeII GATC 5 cut(s) 162, 261, 623, 882, 1018
NheI GCTAGC 1 cut(s) 509
NlaIII CATG 9 cut(s) 268, 288, 335, 631, 712, 746, 1094, 1174, 1345
NlaIV GGNNCC 3 cut(s) 748, 1361, 1374
NmeAIII GCCGAG 1 cut(s) 282
NmuCI GTSAC 1 cut(s) 577
PceI AGGCCT 1 cut(s) 366
PctI GAATGC 2 cut(s) 339, 1029
PdmI GAANNNNTTC 1 cut(s) 1398
PfeI GAWTC 3 cut(s) 281, 302, 631
PkrI GCNGC 2 cut(s) 838, 953
PleI GAGTC 3 cut(s) 595, 766, 1080
PpsI GAGTC 3 cut(s) 595, 766, 1080
PpuMI RGGWCCY 1 cut(s) 1372
PsiI TTATAA 1 cut(s) 446
Psp124BI GAGCTC 1 cut(s) 230
Psp5II RGGWCCY 1 cut(s) 1372
PspN4I GGNNCC 3 cut(s) 748, 1361, 1374
PspPI GGNCC 4 cut(s) 174, 690, 747, 1372
PspPPI RGGWCCY 1 cut(s) 1372
PsuI RGATCY 2 cut(s) 623, 882
PvuII CAGCTG 1 cut(s) 1248
RsaI GTAC 3 cut(s) 200, 608, 1313
RsaNI GTAC 3 cut(s) 199, 607, 1312
RseI CAYNNNNRTG 1 cut(s) 314
SacI GAGCTC 1 cut(s) 230
SaqAI TTAA 2 cut(s) 141, 1236
SatI GCNGC 2 cut(s) 837, 952
Sau3AI GATC 5 cut(s) 162, 261, 623, 882, 1018
Sau96I GGNCC 4 cut(s) 174, 690, 747, 1372
SchI GAGTC 3 cut(s) 596, 767, 1081
SduI GDGCHC 2 cut(s) 230, 599
SgrAI CRCCGGYG 1 cut(s) 1037
SinI GGWCC 2 cut(s) 174, 1372
SmiMI CAYNNNNRTG 1 cut(s) 314
SmlI CTYRAG 3 cut(s) 436, 1097, 1190
SmoI CTYRAG 3 cut(s) 436, 1097, 1190
Sse9I AATT 9 cut(s) 181, 381, 601, 640, 870, 935, 1062, 1302, 1349
SseBI AGGCCT 1 cut(s) 366
SsiI CCGC 3 cut(s) 492, 1041, 1049
SspI AATATT 1 cut(s) 562
SspMI CTAG 2 cut(s) 194, 510
SstI GAGCTC 1 cut(s) 230
StuI AGGCCT 1 cut(s) 366
StyI CCWWGG 1 cut(s) 831
TaaI ACNGT 3 cut(s) 150, 725, 1207
TasI AATT 9 cut(s) 181, 381, 601, 640, 870, 935, 1062, 1302, 1349
TfiI GAWTC 3 cut(s) 281, 302, 631
Tru1I TTAA 2 cut(s) 141, 1236
Tru9I TTAA 2 cut(s) 141, 1236
TscAI CASTG 2 cut(s) 1090, 1212
TseFI GTSAC 1 cut(s) 577
TseI GCWGC 2 cut(s) 836, 951
Tsp45I GTSAC 1 cut(s) 577
TspDTI ATGAA 2 cut(s) 34, 1330
TspRI CASTG 2 cut(s) 1090, 1212
VpaK11BI GGWCC 2 cut(s) 174, 1372
XapI RAATTY 3 cut(s) 181, 870, 1349
XbaI TCTAGA 1 cut(s) 193
XcmI CCANNNNNNNNNTGG 2 cut(s) 898, 1339
XmnI GAANNNNTTC 1 cut(s) 1398
XspI CTAG 2 cut(s) 194, 510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.