RH1BG402600

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0000139
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG402600.1

Sequence Viewer

Length: 1362 bp
ATGAATCTTCATTTCAACCCGTCCCTCTTCAGTCTCTTCACAAACCTTGAAGGTCTTTCACTCTTTCCCATCTCTATCGGTCCATCTCCATCTGGTTTCGTTGGGTTGAGAAGATTGAAGGTGTTGGCAATGTTGAAGAACAAGGAGCAGCAGGAGCTCCAACATGTCCCTGAACATGTTGTGCTCAACATTCTCTGCCGCTTGCCGGTCAAGTCCTTGATCCGCTTCACTTGTGTCTCAAAACGCTGGCGCTCTCTTATCATTTCCGACCCCCAATTTGGCGACTCCCATTTCCAACTGGCAGCATCTCACCTCCGTCATAATGTCTTAATCGTTAACATTTCAAAAGGTACACTCGGAACTATGGTACCCTTTGGATTTCAATCCGTGCAAGATAAATTTTCGATCAAAAATCTCACCTCCCCATTCCAGCGGTGTAGCCAAATTCCAGTAATGGGCTCTTGCAATGGTTTGGTAGTTTTAGCTAATTTCCATCCCTATGTTAGGGTGTCTCGATTCCAACCATGTTCTGATGATTATAATAGTCTGGTAATGTGGAACCCATCAACTGGATTCTTCCGCAACATACCTTGTCCAAATTTTCAGATTGGGATGATAAAATTAACAGAGGAAGAGAATGGGATCGGTGTATATTATGGTTTTGGTCAAGTGTCGGCCTCTGACGACTACAAACTTGTGGTCATACCAAATTTGGGTGCTTTTATGGAGGTGCAAGTGTTCTCAGTCAGAGCCAACTGTTGGAAAGTTGTTAAAGCTCCTTACTTGTCGCCATACCGCCCCTGGTCTGAAGAATTGGGGACTTATTCAAATGGAGCGATTCATTGGGTCAGTAACCGTGAACCTGGGATTTTCGAGCCACCTGTGTATGCTTTTGATCTGGCAAATGAGGAGTTTCGGGAAATGACATTGCCTGTTCTTAGCCGTAATGAAGATGGCATGGAAATGACGCAAATTAGAACTCAAGTTCTTTTAGGAGGATGTCTTTGTGTGATGTTTCAGGATGTGATGCCTCAGGACGCTAACAAGTATACTGAATTTTGGATGATGAAAGAGTATGGGCGGCCTGAGTCTTGGGTTAAACTCTTTGGGTTTAACCTACATGATTTACCAGATGTGTTCGATTCATTCTGTAGCCGCCTTTTTTGGAATCCTATTTTCATTGCAGAAGACGGTACAGTCGTGATCAAACTGCGTACCCAGAAGGAGTTGATATGGATTAAATGCCGTAAAGAAGAGAAGCCATTCTGCACCGACCGGTACCGTCTTGAGGAGGTGGCGGCACATCATTATGCATTTGATGCCATTTTGTATGATGAAACTCTAGTTTCGATACCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

453

Amino Acids

51.97

Weight (kDa)

6.43

Isoelectric Point (pI)

46.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 54 - 90 1e-09 F-box domain
F-box-like PF12937 54 - 90 7.9e-07 F-box-like
FBA_3 PF08268 149 - 367 4.4e-10 F-box associated beta propeller domain
FBA_1 PF07734 178 - 450 7.9e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 540
AasI GACNNNNNNGTC 1 cut(s) 1196
Acc65I GGTACC 2 cut(s) 367, 1278
AccB1I GGYRCC 2 cut(s) 367, 1278
AccB7I CCANNNNNTGG 2 cut(s) 569, 759
AccI GTMKAC 1 cut(s) 1049
AciI CCGC 8 cut(s) 199, 223, 433, 580, 796, 1081, 1156, 1298
AclWI GGATC 2 cut(s) 214, 650
AcsI RAATTY 5 cut(s) 398, 444, 598, 709, 1055
AcuI CTGAAG 2 cut(s) 13, 828
AfaI GTAC 5 cut(s) 352, 369, 1195, 1216, 1280
AfiI CCNNNNNNNGG 8 cut(s) 205, 278, 455, 504, 569, 713, 759, 1288
AflIII ACRYGT 2 cut(s) 163, 175
AgeI ACCGGT 1 cut(s) 1275
AgsI TTSAA 7 cut(s) 16, 50, 118, 136, 345, 383, 828
AjnI CCWGG 2 cut(s) 800, 862
AluBI AGCT 3 cut(s) 157, 485, 776
AluI AGCT 3 cut(s) 157, 485, 776
Alw21I GWGCWC 2 cut(s) 159, 186
Alw26I GTCTC 3 cut(s) 38, 241, 516
AlwI GGATC 2 cut(s) 214, 650
AoxI GGCC 2 cut(s) 675, 1082
ApeKI GCWGC 2 cut(s) 148, 302
ApoI RAATTY 5 cut(s) 398, 444, 598, 709, 1055
ArsI GACNNNNNNTTYG 4 cut(s) 260, 292, 684, 716
AsiGI ACCGGT 1 cut(s) 1275
Asp700I GAANNNNTTC 1 cut(s) 1262
Asp718I GGTACC 2 cut(s) 367, 1278
AspLEI GCGC 1 cut(s) 252
AspS9I GGNCC 1 cut(s) 80
AsuHPI GGTGA 2 cut(s) 302, 409
AvaII GGWCC 1 cut(s) 80
AxyI CCTNAGG 1 cut(s) 1032
BaeI ACNNNNGTAYC 4 cut(s) 351, 384, 1185, 1218
BanI GGYRCC 2 cut(s) 367, 1278
BanII GRGCYC 2 cut(s) 159, 461
BbsI GAAGAC 1 cut(s) 1194
Bbv12I GWGCWC 2 cut(s) 159, 186
BbvI GCAGC 2 cut(s) 160, 314
BccI CCATC 6 cut(s) 77, 91, 97, 501, 571, 947
BceAI ACGGC 2 cut(s) 927, 1230
BciT130I CCWGG 2 cut(s) 802, 864
BclI TGATCA 1 cut(s) 1203
BcoDI GTCTC 3 cut(s) 38, 241, 516
BfaI CTAG 1 cut(s) 1343
BfmI CTRYAG 1 cut(s) 1150
BfoI RGCGCY 1 cut(s) 253
BisI GCNGC 6 cut(s) 149, 199, 303, 1082, 1156, 1299
BlsI GCNGC 6 cut(s) 150, 200, 304, 1083, 1157, 1300
Bme1390I CCNGG 2 cut(s) 802, 864
Bme18I GGWCC 1 cut(s) 80
BmgT120I GGNCC 1 cut(s) 80
BmiI GGNNCC 3 cut(s) 369, 560, 1280
BmrFI CCNGG 2 cut(s) 802, 864
BmsI GCATC 3 cut(s) 314, 1017, 1309
BpiI GAAGAC 1 cut(s) 1194
BpuEI CTTGAG 2 cut(s) 966, 1307
BsaBI GATNNNNATC 1 cut(s) 382
BsaJI CCNNGG 2 cut(s) 800, 863
BsaWI WCCGGW 1 cut(s) 1275
Bsc4I CCNNNNNNNGG 8 cut(s) 205, 278, 455, 504, 569, 713, 759, 1288
Bse118I RCCGGY 2 cut(s) 205, 1275
Bse1I ACTGG 3 cut(s) 303, 449, 574
Bse21I CCTNAGG 1 cut(s) 1032
Bse3DI GCAATG 4 cut(s) 135, 472, 926, 1179
Bse8I GATNNNNATC 1 cut(s) 382
BseBI CCWGG 2 cut(s) 802, 864
BseDI CCNNGG 2 cut(s) 800, 863
BseGI GGATG 5 cut(s) 493, 618, 1004, 1027, 1068
BseJI GATNNNNATC 1 cut(s) 382
BseLI CCNNNNNNNGG 8 cut(s) 205, 278, 455, 504, 569, 713, 759, 1288
BseMI GCAATG 4 cut(s) 135, 472, 926, 1179
BseMII CTCAG 3 cut(s) 756, 1046, 1077
BseNI ACTGG 3 cut(s) 303, 449, 574
BseRI GAGGAG 2 cut(s) 923, 1304
BseXI GCAGC 2 cut(s) 160, 314
BsgI GTGCAG 1 cut(s) 1252
Bsh1285I CGRYCG 1 cut(s) 1276
BshFI GGCC 2 cut(s) 677, 1084
BshNI GGYRCC 2 cut(s) 367, 1278
BshTI ACCGGT 1 cut(s) 1275
BsiEI CGRYCG 1 cut(s) 1276
BsiHKAI GWGCWC 2 cut(s) 159, 186
BsiSI CCGG 2 cut(s) 206, 1276
BslFI GGGAC 3 cut(s) 7, 152, 832
BslI CCNNNNNNNGG 8 cut(s) 205, 278, 455, 504, 569, 713, 759, 1288
BsmAI GTCTC 3 cut(s) 38, 241, 516
BsmFI GGGAC 3 cut(s) 7, 152, 832
BsnI GGCC 2 cut(s) 677, 1084
Bsp1286I GDGCHC 3 cut(s) 159, 186, 461
Bsp143I GATC 5 cut(s) 219, 405, 642, 895, 1203
BspACI CCGC 8 cut(s) 199, 223, 433, 580, 796, 1081, 1156, 1298
BspANI GGCC 2 cut(s) 677, 1084
BspCNI CTCAG 3 cut(s) 755, 1045, 1078
BspLI GGNNCC 3 cut(s) 369, 560, 1280
BspPI GGATC 2 cut(s) 214, 650
BspT107I GGYRCC 2 cut(s) 367, 1278
BsrDI GCAATG 4 cut(s) 135, 472, 926, 1179
BsrFI RCCGGY 2 cut(s) 205, 1275
BsrI ACTGG 3 cut(s) 303, 449, 574
BssAI RCCGGY 2 cut(s) 205, 1275
BssECI CCNNGG 2 cut(s) 800, 863
BssMI GATC 5 cut(s) 219, 405, 642, 895, 1203
BssNAI GTATAC 1 cut(s) 1050
Bst1107I GTATAC 1 cut(s) 1050
Bst2UI CCWGG 2 cut(s) 802, 864
Bst4CI ACNGT 5 cut(s) 758, 857, 1193, 1198, 1283
Bst6I CTCTTC 4 cut(s) 32, 41, 627, 1248
BstAPI GCANNNNNTGC 1 cut(s) 1319
BstC8I GCNNGC 2 cut(s) 203, 248
BstDEI CTNAG 4 cut(s) 742, 938, 1032, 1086
BstENI CCTNNNNNAGG 1 cut(s) 502
BstF5I GGATG 5 cut(s) 493, 618, 1004, 1027, 1068
BstH2I RGCGCY 1 cut(s) 253
BstHHI GCGC 1 cut(s) 252
BstKTI GATC 5 cut(s) 222, 408, 645, 898, 1206
BstMAI GTCTC 3 cut(s) 38, 241, 516
BstMBI GATC 5 cut(s) 219, 405, 642, 895, 1203
BstMCI CGRYCG 1 cut(s) 1276
BstMWI GCNNNNNNNGC 2 cut(s) 154, 1319
BstNI CCWGG 2 cut(s) 802, 864
BstNSI RCATGY 2 cut(s) 167, 179
BstSCI CCNGG 2 cut(s) 800, 862
BstSFI CTRYAG 1 cut(s) 1150
BstV1I GCAGC 2 cut(s) 160, 314
BstV2I GAAGAC 1 cut(s) 1194
BstZ17I GTATAC 1 cut(s) 1050
Bsu36I CCTNAGG 1 cut(s) 1032
BsuRI GGCC 2 cut(s) 677, 1084
BtsCI GGATG 5 cut(s) 493, 618, 1004, 1027, 1068
Cac8I GCNNGC 2 cut(s) 203, 248
CfoI GCGC 1 cut(s) 252
Cfr10I RCCGGY 2 cut(s) 205, 1275
Cfr13I GGNCC 1 cut(s) 80
CseI GACGC 2 cut(s) 976, 1046
Csp6I GTAC 5 cut(s) 351, 368, 1194, 1215, 1279
CspAI ACCGGT 1 cut(s) 1275
CviAII CATG 5 cut(s) 164, 176, 525, 958, 1121
CviQI GTAC 5 cut(s) 351, 368, 1194, 1215, 1279
DdeI CTNAG 4 cut(s) 742, 938, 1032, 1086
DpnI GATC 5 cut(s) 221, 407, 644, 897, 1205
DpnII GATC 5 cut(s) 219, 405, 642, 895, 1203
DrdI GACNNNNNNGTC 1 cut(s) 1196
DseDI GACNNNNNNGTC 1 cut(s) 1196
Eam1104I CTCTTC 4 cut(s) 32, 41, 627, 1248
EarI CTCTTC 4 cut(s) 32, 41, 627, 1248
Ecl136II GAGCTC 1 cut(s) 157
Eco24I GRGCYC 2 cut(s) 159, 461
Eco47I GGWCC 1 cut(s) 80
Eco53kI GAGCTC 1 cut(s) 157
Eco57I CTGAAG 2 cut(s) 13, 828
Eco81I CCTNAGG 1 cut(s) 1032
EcoICRI GAGCTC 1 cut(s) 157
EcoNI CCTNNNNNAGG 1 cut(s) 502
EcoRII CCWGG 2 cut(s) 800, 862
EcoT22I ATGCAT 1 cut(s) 1315
EcoT38I GRGCYC 2 cut(s) 159, 461
FaeI CATG 5 cut(s) 167, 179, 528, 961, 1124
FaqI GGGAC 3 cut(s) 7, 152, 832
FatI CATG 5 cut(s) 163, 175, 524, 957, 1120
FbaI TGATCA 1 cut(s) 1203
FblI GTMKAC 1 cut(s) 1049
Fnu4HI GCNGC 6 cut(s) 149, 199, 303, 1082, 1156, 1299
FokI GGATG 5 cut(s) 480, 625, 1011, 1034, 1075
FriOI GRGCYC 2 cut(s) 159, 461
Fsp4HI GCNGC 6 cut(s) 149, 199, 303, 1082, 1156, 1299
FspBI CTAG 1 cut(s) 1343
GlaI GCGC 1 cut(s) 251
GluI GCNGC 6 cut(s) 149, 199, 303, 1082, 1156, 1299
HaeII RGCGCY 1 cut(s) 253
HaeIII GGCC 2 cut(s) 677, 1084
HapII CCGG 2 cut(s) 206, 1276
HgaI GACGC 2 cut(s) 976, 1046
HhaI GCGC 1 cut(s) 252
Hin1II CATG 5 cut(s) 167, 179, 528, 961, 1124
Hin6I GCGC 1 cut(s) 250
HinP1I GCGC 1 cut(s) 250
HincII GTYRAC 1 cut(s) 337
HindII GTYRAC 1 cut(s) 337
HinfI GANTC 8 cut(s) 4, 284, 516, 573, 838, 1088, 1142, 1168
HpaI GTTAAC 1 cut(s) 337
HpaII CCGG 2 cut(s) 206, 1276
HphI GGTGA 2 cut(s) 302, 409
Hpy166II GTNNAC 4 cut(s) 337, 353, 860, 1050
Hpy188I TCNGA 7 cut(s) 268, 359, 532, 606, 682, 749, 808
Hpy188III TCNNGA 6 cut(s) 513, 917, 1019, 1034, 1201, 1286
Hpy8I GTNNAC 4 cut(s) 337, 353, 860, 1050
HpyAV CCTTC 3 cut(s) 44, 112, 1216
HpyCH4III ACNGT 5 cut(s) 758, 857, 1193, 1198, 1283
HpyCH4V TGCA 6 cut(s) 391, 465, 733, 1184, 1269, 1313
HpyF10VI GCNNNNNNNGC 2 cut(s) 154, 1319
HpyF3I CTNAG 4 cut(s) 742, 938, 1032, 1086
Hsp92II CATG 5 cut(s) 167, 179, 528, 961, 1124
HspAI GCGC 1 cut(s) 250
KpnI GGTACC 2 cut(s) 371, 1282
Ksp22I TGATCA 1 cut(s) 1203
KspAI GTTAAC 1 cut(s) 337
Kzo9I GATC 5 cut(s) 219, 405, 642, 895, 1203
LmnI GCTCC 5 cut(s) 145, 154, 162, 781, 833
Lsp1109I GCAGC 2 cut(s) 160, 314
LweI GCATC 3 cut(s) 314, 1017, 1309
MaeI CTAG 1 cut(s) 1343
MaeIII GTNAC 1 cut(s) 851
MalI GATC 5 cut(s) 221, 407, 644, 897, 1205
MboI GATC 5 cut(s) 219, 405, 642, 895, 1203
MhlI GDGCHC 3 cut(s) 159, 186, 461
MlyI GAGTC 2 cut(s) 278, 1097
MmeI TCCRAC 5 cut(s) 184, 291, 319, 544, 740
Mph1103I ATGCAT 1 cut(s) 1315
MroXI GAANNNNTTC 1 cut(s) 1262
MseI TTAA 7 cut(s) 329, 336, 623, 771, 1098, 1113, 1239
MslI CAYNNNNRTG 3 cut(s) 498, 962, 1308
MspA1I CMGCKG 1 cut(s) 433
MspI CCGG 2 cut(s) 206, 1276
MspR9I CCNGG 2 cut(s) 802, 864
MvaI CCWGG 2 cut(s) 802, 864
MwoI GCNNNNNNNGC 2 cut(s) 154, 1319
NdeII GATC 5 cut(s) 219, 405, 642, 895, 1203
NlaIII CATG 5 cut(s) 167, 179, 528, 961, 1124
NlaIV GGNNCC 3 cut(s) 369, 560, 1280
NsiI ATGCAT 1 cut(s) 1315
NspI RCATGY 2 cut(s) 167, 179
PciI ACATGT 2 cut(s) 163, 175
PcsI WCGNNNNNNNCGW 1 cut(s) 1197
PdmI GAANNNNTTC 1 cut(s) 1262
PfeI GAWTC 6 cut(s) 4, 516, 573, 838, 1142, 1168
PflMI CCANNNNNTGG 2 cut(s) 569, 759
PinAI ACCGGT 1 cut(s) 1275
PkrI GCNGC 6 cut(s) 150, 200, 304, 1083, 1157, 1300
PleI GAGTC 2 cut(s) 278, 1096
PpsI GAGTC 2 cut(s) 278, 1096
PscI ACATGT 2 cut(s) 163, 175
PsiI TTATAA 1 cut(s) 540
Psp124BI GAGCTC 1 cut(s) 159
Psp6I CCWGG 2 cut(s) 800, 862
PspGI CCWGG 2 cut(s) 800, 862
PspN4I GGNNCC 3 cut(s) 369, 560, 1280
PspPI GGNCC 1 cut(s) 80
RsaI GTAC 5 cut(s) 352, 369, 1195, 1216, 1280
RsaNI GTAC 5 cut(s) 351, 368, 1194, 1215, 1279
RseI CAYNNNNRTG 3 cut(s) 498, 962, 1308
SacI GAGCTC 1 cut(s) 159
SaqAI TTAA 7 cut(s) 329, 336, 623, 771, 1098, 1113, 1239
SatI GCNGC 6 cut(s) 149, 199, 303, 1082, 1156, 1299
Sau3AI GATC 5 cut(s) 219, 405, 642, 895, 1203
Sau96I GGNCC 1 cut(s) 80
SchI GAGTC 2 cut(s) 278, 1097
ScrFI CCNGG 2 cut(s) 802, 864
SduI GDGCHC 3 cut(s) 159, 186, 461
SfaNI GCATC 3 cut(s) 314, 1017, 1309
SfcI CTRYAG 1 cut(s) 1150
SinI GGWCC 1 cut(s) 80
SmiMI CAYNNNNRTG 3 cut(s) 498, 962, 1308
SmlI CTYRAG 2 cut(s) 981, 1286
SmoI CTYRAG 2 cut(s) 981, 1286
SsiI CCGC 8 cut(s) 199, 223, 433, 580, 796, 1081, 1156, 1298
SspMI CTAG 1 cut(s) 1343
SstI GAGCTC 1 cut(s) 159
StyD4I CCNGG 2 cut(s) 800, 862
TaaI ACNGT 5 cut(s) 758, 857, 1193, 1198, 1283
TaqI TCGA 5 cut(s) 404, 514, 873, 1140, 1349
TaqII GACCGA 1 cut(s) 68
TauI GCSGC 4 cut(s) 201, 1084, 1158, 1301
TfiI GAWTC 6 cut(s) 4, 516, 573, 838, 1142, 1168
Tru1I TTAA 7 cut(s) 329, 336, 623, 771, 1098, 1113, 1239
Tru9I TTAA 7 cut(s) 329, 336, 623, 771, 1098, 1113, 1239
TseI GCWGC 2 cut(s) 148, 302
TspDTI ATGAA 7 cut(s) 17, 830, 963, 1082, 1134, 1168, 1350
TspGWI ACGGA 2 cut(s) 305, 376
Van91I CCANNNNNTGG 2 cut(s) 569, 759
VpaK11BI GGWCC 1 cut(s) 80
XagI CCTNNNNNAGG 1 cut(s) 502
XapI RAATTY 5 cut(s) 398, 444, 598, 709, 1055
XceI RCATGY 2 cut(s) 167, 179
XcmI CCANNNNNNNNNTGG 1 cut(s) 798
XmiI GTMKAC 1 cut(s) 1049
XmnI GAANNNNTTC 1 cut(s) 1262
XspI CTAG 1 cut(s) 1343
Zsp2I ATGCAT 1 cut(s) 1315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.