Rmu_sc0008955.1_g000008

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008955.1
OG0000139
Physical Location & Seq
Reverse (-)
13824 .. 15882
2059 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008955.1_g000008.1.cds

Sequence Viewer

Length: 1146 bp
ctgtcacagcatccaagatcgaccagaccggccttgactctcggcgtcgatcagttcccggcgtctccagcacgcctcacgcctagcaacccagtcgcacagccgcgcagatccgcctgcagtacatcccgcctgcagcagcagcgccgccttcgccttattgccggcgcgacctccactggtttatttggagttaattcttcggtcacaaatctcaccttaccatccgaggagcattgcagaattaaaatactggcttcgtgcaacggcttggtagttctaggtaatttttacaaagagttgtctatttggaacccatcaattgggttcttccgcaaaattccttctccagacttgtcatcagtaacgataaaatctagaacaattcaagtagataaatatggttttggctatgtctcatccactgatgactacaaacttgttttaatagtcgacattggttctgatgaccttgtttctgcaccggatgttaagatcttcatattctcagtgagagctaactcttggaaaattgatgaagtttctcgctggccattcctcgagtacagaccgactagtgactgtggaactctttcaaatgaagcgatccattgggttaaccgatactatgactatgactatctagaagactacattgaagcagtatttgatgtctgtgcttatgatttggaaaatgaggagttccgtaaagtgcctgttccttgttttaaccaagatgatgatcgagtttttgatagaagaatgcggactgttgttcattcaggaggatgcctttgcgttttggttcagactatgcataacaggggtggggaccgtggggatattgaattgtggatgatgagagattacggggtttccaattcatgggtgaaactctacaaattaagcaagtatgatttaccggttccgcttacaaaatcttatggttggaaatcttgggatctaagtttggttactgaaactggttcaattgtgatcaagtttgacaacgagttgctcaggattgaatgccgtaaagaagagaagccggtttgtgtcggccgatataggcctgaggaagtgtctgggtgttacttttttaacgcgactgggtatgatgaaactctaatttcggtaccagaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

381

Amino Acids

43.39

Weight (kDa)

6.07

Isoelectric Point (pI)

48.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1135
AccB1I GGYRCC 1 cut(s) 1135
AccB7I CCANNNNNTGG 2 cut(s) 323, 885
AccI GTMKAC 1 cut(s) 453
AccII CGCG 3 cut(s) 106, 170, 1106
AciI CCGC 7 cut(s) 104, 114, 130, 148, 334, 766, 929
AclWI GGATC 3 cut(s) 105, 601, 969
AcoI YGGCCR 2 cut(s) 551, 1060
AcsI RAATTY 1 cut(s) 339
AcyI GRCGYC 2 cut(s) 45, 62
AfaI GTAC 3 cut(s) 124, 566, 1137
AfiI CCNNNNNNNGG 2 cut(s) 323, 885
AgeI ACCGGT 1 cut(s) 922
AgsI TTSAA 6 cut(s) 389, 597, 659, 848, 990, 1028
AhlI ACTAGT 1 cut(s) 575
AluBI AGCT 1 cut(s) 518
AluI AGCT 1 cut(s) 518
Alw26I GTCTC 2 cut(s) 69, 421
AlwI GGATC 3 cut(s) 105, 601, 969
Ama87I CYCGRG 1 cut(s) 560
AoxI GGCC 4 cut(s) 30, 551, 1060, 1070
ApeKI GCWGC 3 cut(s) 136, 139, 142
ApoI RAATTY 1 cut(s) 339
AsiGI ACCGGT 1 cut(s) 922
Asp700I GAANNNNTTC 1 cut(s) 592
Asp718I GGTACC 1 cut(s) 1135
AspLEI GCGC 3 cut(s) 108, 147, 170
AspS9I GGNCC 1 cut(s) 832
AsuC2I CCSGG 1 cut(s) 59
AsuHPI GGTGA 2 cut(s) 208, 901
AvaI CYCGRG 1 cut(s) 560
AvaII GGWCC 1 cut(s) 832
AxyI CCTNAGG 1 cut(s) 1074
BalI TGGCCA 1 cut(s) 553
BanI GGYRCC 1 cut(s) 1135
BbsI GAAGAC 1 cut(s) 654
BbvI GCAGC 3 cut(s) 148, 151, 154
BccI CCATC 2 cut(s) 232, 325
BceAI ACGGC 2 cut(s) 283, 1017
BcgI CGANNNNNNTGC 2 cut(s) 76, 110
BclI TGATCA 1 cut(s) 996
BcnI CCSGG 1 cut(s) 59
BcoDI GTCTC 2 cut(s) 69, 421
BcuI ACTAGT 1 cut(s) 575
BfaI CTAG 5 cut(s) 84, 281, 378, 576, 644
BfmI CTRYAG 2 cut(s) 118, 134
BfoI RGCGCY 1 cut(s) 148
BglII AGATCT 1 cut(s) 495
BisI GCNGC 5 cut(s) 104, 137, 140, 143, 148
BlsI GCNGC 5 cut(s) 105, 138, 141, 144, 149
Bme1390I CCNGG 1 cut(s) 59
Bme18I GGWCC 1 cut(s) 832
BmeT110I CYCGRG 1 cut(s) 560
BmgT120I GGNCC 1 cut(s) 832
BmiI GGNNCC 4 cut(s) 314, 833, 927, 1137
BmrFI CCNGG 1 cut(s) 59
BmrI ACTGGG 2 cut(s) 86, 1119
BmsI GCATC 2 cut(s) 19, 779
BmuI ACTGGG 2 cut(s) 86, 1119
BpiI GAAGAC 1 cut(s) 654
BpmI CTGGAG 2 cut(s) 51, 333
Bpu10I CCTNAGC 1 cut(s) 1019
BpuMI CCSGG 1 cut(s) 59
BsaBI GATNNNNATC 1 cut(s) 741
BsaHI GRCGYC 2 cut(s) 45, 62
BsaJI CCNNGG 2 cut(s) 228, 835
BsaWI WCCGGW 2 cut(s) 484, 922
Bsc4I CCNNNNNNNGG 2 cut(s) 323, 885
Bse118I RCCGGY 4 cut(s) 28, 164, 922, 1048
Bse1I ACTGG 5 cut(s) 92, 184, 258, 988, 1114
Bse21I CCTNAGG 1 cut(s) 1074
Bse3DI GCAATG 1 cut(s) 235
Bse8I GATNNNNATC 1 cut(s) 741
BseDI CCNNGG 2 cut(s) 228, 835
BseGI GGATG 7 cut(s) 10, 125, 224, 419, 493, 794, 861
BseJI GATNNNNATC 1 cut(s) 741
BseLI CCNNNNNNNGG 2 cut(s) 323, 885
BseMI GCAATG 1 cut(s) 235
BseMII CTCAG 3 cut(s) 522, 1033, 1065
BseNI ACTGG 5 cut(s) 92, 184, 258, 988, 1114
BseRI GAGGAG 2 cut(s) 245, 713
BseX3I CGGCCG 1 cut(s) 1060
BseXI GCAGC 3 cut(s) 148, 151, 154
BsgI GTGCAG 1 cut(s) 465
Bsh1236I CGCG 3 cut(s) 106, 170, 1106
Bsh1285I CGRYCG 1 cut(s) 1063
BshFI GGCC 4 cut(s) 32, 553, 1062, 1072
BshNI GGYRCC 1 cut(s) 1135
BshTI ACCGGT 1 cut(s) 922
BsiEI CGRYCG 1 cut(s) 1063
BsiHKCI CYCGRG 1 cut(s) 560
BsiSI CCGG 6 cut(s) 29, 59, 165, 485, 923, 1049
BslFI GGGAC 1 cut(s) 845
BslI CCNNNNNNNGG 2 cut(s) 323, 885
BsmAI GTCTC 2 cut(s) 69, 421
BsmBI CGTCTC 1 cut(s) 69
BsmFI GGGAC 1 cut(s) 845
BsmI GAATGC 2 cut(s) 768, 1034
BsnI GGCC 4 cut(s) 32, 553, 1062, 1072
BsoBI CYCGRG 1 cut(s) 560
Bsp143I GATC 8 cut(s) 17, 49, 110, 495, 606, 742, 961, 996
BspACI CCGC 7 cut(s) 104, 114, 130, 148, 334, 766, 929
BspANI GGCC 4 cut(s) 32, 553, 1062, 1072
BspCNI CTCAG 3 cut(s) 521, 1032, 1066
BspFNI CGCG 3 cut(s) 106, 170, 1106
BspLI GGNNCC 4 cut(s) 314, 833, 927, 1137
BspMAI CTGCAG 2 cut(s) 122, 138
BspPI GGATC 3 cut(s) 105, 601, 969
BspT107I GGYRCC 1 cut(s) 1135
BsrDI GCAATG 1 cut(s) 235
BsrFI RCCGGY 4 cut(s) 28, 164, 922, 1048
BsrI ACTGG 5 cut(s) 92, 184, 258, 988, 1114
BssAI RCCGGY 4 cut(s) 28, 164, 922, 1048
BssECI CCNNGG 2 cut(s) 228, 835
BssMI GATC 8 cut(s) 17, 49, 110, 495, 606, 742, 961, 996
BssNI GRCGYC 2 cut(s) 45, 62
Bst4CI ACNGT 3 cut(s) 584, 772, 836
Bst6I CTCTTC 1 cut(s) 1035
BstACI GRCGYC 2 cut(s) 45, 62
BstC8I GCNNGC 5 cut(s) 73, 118, 134, 166, 551
BstDEI CTNAG 4 cut(s) 508, 965, 1019, 1074
BstDSI CCRYGG 1 cut(s) 835
BstF5I GGATG 7 cut(s) 10, 125, 224, 419, 493, 794, 861
BstFNI CGCG 3 cut(s) 106, 170, 1106
BstH2I RGCGCY 1 cut(s) 148
BstHHI GCGC 3 cut(s) 108, 147, 170
BstKTI GATC 8 cut(s) 20, 52, 113, 498, 609, 745, 964, 999
BstMAI GTCTC 2 cut(s) 69, 421
BstMBI GATC 8 cut(s) 17, 49, 110, 495, 606, 742, 961, 996
BstMCI CGRYCG 1 cut(s) 1063
BstMWI GCNNNNNNNGC 3 cut(s) 68, 142, 153
BstSCI CCNGG 1 cut(s) 57
BstSFI CTRYAG 2 cut(s) 118, 134
BstUI CGCG 3 cut(s) 106, 170, 1106
BstV1I GCAGC 3 cut(s) 148, 151, 154
BstV2I GAAGAC 1 cut(s) 654
BstX2I RGATCY 3 cut(s) 110, 495, 961
BstYI RGATCY 3 cut(s) 110, 495, 961
BstZI CGGCCG 1 cut(s) 1060
Bsu36I CCTNAGG 1 cut(s) 1074
BsuRI GGCC 4 cut(s) 32, 553, 1062, 1072
BtgI CCRYGG 1 cut(s) 835
BtsCI GGATG 7 cut(s) 10, 125, 224, 419, 493, 794, 861
BtsIMutI CAGTG 3 cut(s) 177, 423, 516
Cac8I GCNNGC 5 cut(s) 73, 118, 134, 166, 551
CfoI GCGC 3 cut(s) 108, 147, 170
Cfr10I RCCGGY 4 cut(s) 28, 164, 922, 1048
Cfr13I GGNCC 1 cut(s) 832
CseI GACGC 2 cut(s) 34, 51
Csp6I GTAC 3 cut(s) 123, 565, 1136
CspAI ACCGGT 1 cut(s) 922
CviAII CATG 1 cut(s) 885
CviQI GTAC 3 cut(s) 123, 565, 1136
DdeI CTNAG 4 cut(s) 508, 965, 1019, 1074
DpnI GATC 8 cut(s) 19, 51, 112, 497, 608, 744, 963, 998
DpnII GATC 8 cut(s) 17, 49, 110, 495, 606, 742, 961, 996
EaeI YGGCCR 2 cut(s) 551, 1060
EagI CGGCCG 1 cut(s) 1060
Eam1104I CTCTTC 1 cut(s) 1035
EarI CTCTTC 1 cut(s) 1035
EciI GGCGGA 1 cut(s) 103
EclXI CGGCCG 1 cut(s) 1060
Eco147I AGGCCT 1 cut(s) 1072
Eco47I GGWCC 1 cut(s) 832
Eco52I CGGCCG 1 cut(s) 1060
Eco81I CCTNAGG 1 cut(s) 1074
Eco88I CYCGRG 1 cut(s) 560
EcoT22I ATGCAT 1 cut(s) 819
Esp3I CGTCTC 1 cut(s) 69
FaeI CATG 1 cut(s) 888
FaqI GGGAC 1 cut(s) 845
FatI CATG 1 cut(s) 884
FauI CCCGC 1 cut(s) 137
FbaI TGATCA 1 cut(s) 996
FblI GTMKAC 1 cut(s) 453
Fnu4HI GCNGC 5 cut(s) 104, 137, 140, 143, 148
FokI GGATG 6 cut(s) 112, 211, 406, 500, 801, 868
Fsp4HI GCNGC 5 cut(s) 104, 137, 140, 143, 148
FspBI CTAG 5 cut(s) 84, 281, 378, 576, 644
GlaI GCGC 3 cut(s) 107, 146, 169
GluI GCNGC 5 cut(s) 104, 137, 140, 143, 148
GsuI CTGGAG 2 cut(s) 51, 333
HaeII RGCGCY 1 cut(s) 148
HaeIII GGCC 4 cut(s) 32, 553, 1062, 1072
HapII CCGG 6 cut(s) 29, 59, 165, 485, 923, 1049
HgaI GACGC 2 cut(s) 34, 51
HhaI GCGC 3 cut(s) 108, 147, 170
Hin1I GRCGYC 2 cut(s) 45, 62
Hin1II CATG 1 cut(s) 888
Hin6I GCGC 3 cut(s) 106, 145, 168
HinP1I GCGC 3 cut(s) 106, 145, 168
HincII GTYRAC 2 cut(s) 454, 619
HindII GTYRAC 2 cut(s) 454, 619
HinfI GANTC 1 cut(s) 37
HpaI GTTAAC 1 cut(s) 619
HpaII CCGG 6 cut(s) 29, 59, 165, 485, 923, 1049
HphI GGTGA 2 cut(s) 208, 901
Hpy166II GTNNAC 2 cut(s) 454, 619
Hpy188I TCNGA 3 cut(s) 229, 466, 810
Hpy188III TCNNGA 5 cut(s) 350, 378, 644, 783, 1021
Hpy8I GTNNAC 2 cut(s) 454, 619
Hpy99I CGWCG 1 cut(s) 50
HpyAV CCTTC 2 cut(s) 161, 354
HpyCH4III ACNGT 3 cut(s) 584, 772, 836
HpyCH4V TGCA 6 cut(s) 120, 136, 240, 264, 482, 817
HpyF10VI GCNNNNNNNGC 3 cut(s) 68, 142, 153
HpyF3I CTNAG 4 cut(s) 508, 965, 1019, 1074
Hsp92I GRCGYC 2 cut(s) 45, 62
Hsp92II CATG 1 cut(s) 888
HspAI GCGC 3 cut(s) 106, 145, 168
KpnI GGTACC 1 cut(s) 1139
KroI GCCGGC 1 cut(s) 164
KroNI GCCGGC 1 cut(s) 166
Ksp22I TGATCA 1 cut(s) 996
KspAI GTTAAC 1 cut(s) 619
Kzo9I GATC 8 cut(s) 17, 49, 110, 495, 606, 742, 961, 996
LmnI GCTCC 1 cut(s) 232
Lsp1109I GCAGC 3 cut(s) 148, 151, 154
LweI GCATC 2 cut(s) 19, 779
MaeI CTAG 5 cut(s) 84, 281, 378, 576, 644
MaeIII GTNAC 6 cut(s) 3, 205, 364, 578, 973, 1091
MalI GATC 8 cut(s) 19, 51, 112, 497, 608, 744, 963, 998
MboI GATC 8 cut(s) 17, 49, 110, 495, 606, 742, 961, 996
MboII GAAGA 6 cut(s) 192, 322, 490, 659, 771, 1052
MfeI CAATTG 2 cut(s) 321, 990
MflI RGATCY 3 cut(s) 110, 495, 961
MlsI TGGCCA 1 cut(s) 553
MluNI TGGCCA 1 cut(s) 553
MlyI GAGTC 1 cut(s) 31
MmeI TCCRAC 1 cut(s) 929
MnlI CCTC 7 cut(s) 86, 184, 223, 569, 691, 779, 1069
Mox20I TGGCCA 1 cut(s) 553
Mph1103I ATGCAT 1 cut(s) 819
MroNI GCCGGC 1 cut(s) 164
MroXI GAANNNNTTC 1 cut(s) 592
MscI TGGCCA 1 cut(s) 553
MseI TTAA 8 cut(s) 195, 246, 446, 492, 618, 729, 905, 1101
Msp20I TGGCCA 1 cut(s) 553
MspI CCGG 6 cut(s) 29, 59, 165, 485, 923, 1049
MspR9I CCNGG 1 cut(s) 59
MunI CAATTG 2 cut(s) 321, 990
Mva1269I GAATGC 2 cut(s) 768, 1034
MvnI CGCG 3 cut(s) 106, 170, 1106
MwoI GCNNNNNNNGC 3 cut(s) 68, 142, 153
NaeI GCCGGC 1 cut(s) 166
NciI CCSGG 1 cut(s) 59
NdeII GATC 8 cut(s) 17, 49, 110, 495, 606, 742, 961, 996
NgoMIV GCCGGC 1 cut(s) 164
NlaIII CATG 1 cut(s) 888
NlaIV GGNNCC 4 cut(s) 314, 833, 927, 1137
NmeAIII GCCGAG 1 cut(s) 21
NmuCI GTSAC 3 cut(s) 3, 205, 578
NsiI ATGCAT 1 cut(s) 819
PaeR7I CTCGAG 1 cut(s) 560
PceI AGGCCT 1 cut(s) 1072
PctI GAATGC 2 cut(s) 768, 1034
PdiI GCCGGC 1 cut(s) 166
PdmI GAANNNNTTC 1 cut(s) 592
PflMI CCANNNNNTGG 2 cut(s) 323, 885
PinAI ACCGGT 1 cut(s) 922
PkrI GCNGC 5 cut(s) 105, 138, 141, 144, 149
PleI GAGTC 1 cut(s) 31
PpsI GAGTC 1 cut(s) 31
PspN4I GGNNCC 4 cut(s) 314, 833, 927, 1137
PspPI GGNCC 1 cut(s) 832
PspXI VCTCGAGB 1 cut(s) 560
PstI CTGCAG 2 cut(s) 122, 138
PsuI RGATCY 3 cut(s) 110, 495, 961
RsaI GTAC 3 cut(s) 124, 566, 1137
RsaNI GTAC 3 cut(s) 123, 565, 1136
SalI GTCGAC 1 cut(s) 452
SaqAI TTAA 8 cut(s) 195, 246, 446, 492, 618, 729, 905, 1101
SatI GCNGC 5 cut(s) 104, 137, 140, 143, 148
Sau3AI GATC 8 cut(s) 17, 49, 110, 495, 606, 742, 961, 996
Sau96I GGNCC 1 cut(s) 832
SchI GAGTC 1 cut(s) 31
ScrFI CCNGG 1 cut(s) 59
SetI ASST 5 cut(s) 176, 221, 286, 474, 520
SfaNI GCATC 2 cut(s) 19, 779
SfcI CTRYAG 2 cut(s) 118, 134
Sfr274I CTCGAG 1 cut(s) 560
SinI GGWCC 1 cut(s) 832
SlaI CTCGAG 1 cut(s) 560
SmlI CTYRAG 1 cut(s) 560
SmoI CTYRAG 1 cut(s) 560
SpeI ACTAGT 1 cut(s) 575
SseBI AGGCCT 1 cut(s) 1072
SsiI CCGC 7 cut(s) 104, 114, 130, 148, 334, 766, 929
SspMI CTAG 5 cut(s) 84, 281, 378, 576, 644
StuI AGGCCT 1 cut(s) 1072
StyD4I CCNGG 1 cut(s) 57
TaaI ACNGT 3 cut(s) 584, 772, 836
TaqI TCGA 5 cut(s) 20, 48, 453, 561, 745
TaqII GACCGA 2 cut(s) 193, 586
TatI WGTACW 2 cut(s) 122, 564
TauI GCSGC 2 cut(s) 106, 150
Tru1I TTAA 8 cut(s) 195, 246, 446, 492, 618, 729, 905, 1101
Tru9I TTAA 8 cut(s) 195, 246, 446, 492, 618, 729, 905, 1101
TscAI CASTG 3 cut(s) 184, 430, 516
TseFI GTSAC 3 cut(s) 3, 205, 578
TseI GCWGC 3 cut(s) 136, 139, 142
Tsp45I GTSAC 3 cut(s) 3, 205, 578
TspDTI ATGAA 6 cut(s) 490, 552, 615, 767, 873, 1134
TspGWI ACGGA 1 cut(s) 695
TspRI CASTG 3 cut(s) 184, 430, 516
Van91I CCANNNNNTGG 2 cut(s) 323, 885
VpaK11BI GGWCC 1 cut(s) 832
XapI RAATTY 1 cut(s) 339
XbaI TCTAGA 2 cut(s) 377, 643
XhoI CTCGAG 1 cut(s) 560
XmiI GTMKAC 1 cut(s) 453
XmnI GAANNNNTTC 1 cut(s) 592
XspI CTAG 5 cut(s) 84, 281, 378, 576, 644
Zsp2I ATGCAT 1 cut(s) 819
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.