Rmu_sc0008955.1_g000019

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008955.1
OG0000139
Physical Location & Seq
Reverse (-)
70960 .. 72129
1170 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008955.1_g000019.1.cds

Sequence Viewer

Length: 1170 bp
atgtcgaagaagaaggagcaccttgagctccacctccctgaagatatactagtcaagattttgtgtcggttgccagtaaaatccctgatgcggctcacttttgtatcaaaacaatggcgttccattatccttcatgatcccaaattttcgaaatcccaactccaactagcatctcagcaccaaaccctccgtcaaagagtccttatttactaccctttacttccaactcctgccgaattatccaaactcggcgcccatgacattccaaagttaccttctcgatttcagtctttagaagataacttttcaggccaaattctcaacttcccaggggaggaaaataggcacatagtattaatcggttcctgtaatggtttactagctctagcggaagactgttgggctaactgttctatctggaacccctcgactggattcttccgtagtatatctagtcaaagtccctgggatgggacggcaaattggattgacggaaatgaaaactgcgcattctatataaatcatgggtttgccactgatgactataaacttgtttgtgttttagcctccattggaggtcttgcaggactccatgtcttctcagtgagggacaacttttggaaagttagagctgctaacttaccattgccaggcttgcatggtggaccggggactctttcaaatgaagcacttcactggatcagctaccctgaaaatgagcttttgagctctatctatgcttttgatttggctgaggaggagttccggcaagtgtcactgccagtttttacccaaatagaagataccgtgaatgggttaaagtctctgattcttttaaatggatgcctttgcgtatggtttgtggatagtaattggcattataacttttgggcaatgacagagtacgcggtgaccaagtcttgggttaagctccttcaatttagtgtacacgatttaccggatgtctttacttcatatggtatttgggatcccattttcatcacagaaggcggtacggttgtgatcaaactggataacaaggaggagttggtcaagattgagttgcggaaagaagagaagccattctgcagtggacggtataggcttgggtgtaagcttcattttgacactgctgtatatgatgaaactctggtttcggtaccttcatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

389

Amino Acids

44.16

Weight (kDa)

5.91

Isoelectric Point (pI)

42.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 882
Acc16I TGCGCA 1 cut(s) 508
Acc65I GGTACC 1 cut(s) 1159
AccB1I GGYRCC 2 cut(s) 251, 1159
AccB7I CCANNNNNTGG 1 cut(s) 921
AccII CGCG 1 cut(s) 908
AciI CCGC 5 cut(s) 91, 389, 908, 1011, 1066
AclWI GGATC 4 cut(s) 131, 707, 983, 996
AcsI RAATTY 2 cut(s) 143, 315
AcuI CTGAAG 1 cut(s) 60
AcyI GRCGYC 1 cut(s) 252
AfaI GTAC 4 cut(s) 905, 948, 1015, 1161
AfiI CCNNNNNNNGG 8 cut(s) 90, 334, 431, 470, 471, 650, 813, 921
AgsI TTSAA 2 cut(s) 681, 938
AhdI GACNNNNNGTC 1 cut(s) 593
AhlI ACTAGT 1 cut(s) 49
AjnI CCWGG 3 cut(s) 328, 464, 649
AjuI GAANNNNNNNTTGG 2 cut(s) 259, 291
AluBI AGCT 8 cut(s) 28, 383, 632, 705, 721, 729, 931, 1117
AluI AGCT 8 cut(s) 28, 383, 632, 705, 721, 729, 931, 1117
Alw21I GWGCWC 3 cut(s) 21, 30, 731
Alw26I GTCTC 1 cut(s) 828
AlwI GGATC 4 cut(s) 131, 707, 983, 996
AoxI GGCC 1 cut(s) 310
ApeKI GCWGC 1 cut(s) 632
ApoI RAATTY 2 cut(s) 143, 315
ArsI GACNNNNNNTTYG 2 cut(s) 175, 207
AseI ATTAAT 1 cut(s) 356
Asp700I GAANNNNTTC 2 cut(s) 690, 1082
Asp718I GGTACC 1 cut(s) 1159
AspLEI GCGC 2 cut(s) 254, 509
AspS9I GGNCC 1 cut(s) 665
AsuC2I CCSGG 1 cut(s) 669
AsuHPI GGTGA 1 cut(s) 922
AsuII TTCGAA 1 cut(s) 149
AvaII GGWCC 1 cut(s) 665
BaeI ACNNNNGTAYC 4 cut(s) 87, 120, 1005, 1038
BamHI GGATCC 1 cut(s) 988
BanI GGYRCC 2 cut(s) 251, 1159
BanII GRGCYC 2 cut(s) 30, 731
BbsI GAAGAC 2 cut(s) 399, 589
Bbv12I GWGCWC 3 cut(s) 21, 30, 731
BbvCI CCTCAGC 1 cut(s) 753
BbvI GCAGC 1 cut(s) 619
BccI CCATC 1 cut(s) 464
BceAI ACGGC 1 cut(s) 492
BciT130I CCWGG 3 cut(s) 330, 466, 651
BclI TGATCA 1 cut(s) 1023
BcnI CCSGG 1 cut(s) 669
BcoDI GTCTC 1 cut(s) 828
BcuI ACTAGT 1 cut(s) 49
BfaI CTAG 5 cut(s) 50, 167, 380, 386, 453
BfmI CTRYAG 1 cut(s) 1087
BfoI RGCGCY 1 cut(s) 255
BisI GCNGC 2 cut(s) 92, 633
BlsI GCNGC 2 cut(s) 93, 634
Bme1390I CCNGG 4 cut(s) 330, 466, 651, 669
Bme18I GGWCC 1 cut(s) 665
BmeRI GACNNNNNGTC 1 cut(s) 593
BmgT120I GGNCC 1 cut(s) 665
BmiI GGNNCC 5 cut(s) 253, 364, 422, 990, 1161
BmrFI CCNGG 4 cut(s) 330, 466, 651, 669
BmsI GCATC 3 cut(s) 78, 179, 833
BpiI GAAGAC 2 cut(s) 399, 589
Bpu10I CCTNAGC 1 cut(s) 753
Bpu14I TTCGAA 1 cut(s) 149
BpuEI CTTGAG 1 cut(s) 44
BpuMI CCSGG 1 cut(s) 669
BsaHI GRCGYC 1 cut(s) 252
BsaJI CCNNGG 5 cut(s) 328, 329, 464, 465, 668
BsaWI WCCGGW 1 cut(s) 958
Bsc4I CCNNNNNNNGG 8 cut(s) 90, 334, 431, 470, 471, 650, 813, 921
Bse1I ACTGG 5 cut(s) 74, 436, 701, 782, 1035
Bse3DI GCAATG 2 cut(s) 644, 900
BseBI CCWGG 3 cut(s) 330, 466, 651
BseDI CCNNGG 5 cut(s) 328, 329, 464, 465, 668
BseGI GGATG 3 cut(s) 475, 848, 967
BseLI CCNNNNNNNGG 8 cut(s) 90, 334, 431, 470, 471, 650, 813, 921
BseMI GCAATG 2 cut(s) 644, 900
BseMII CTCAG 3 cut(s) 188, 615, 744
BseNI ACTGG 5 cut(s) 74, 436, 701, 782, 1035
BseRI GAGGAG 3 cut(s) 770, 773, 1058
BseXI GCAGC 1 cut(s) 619
Bsh1236I CGCG 1 cut(s) 908
BshFI GGCC 1 cut(s) 312
BshNI GGYRCC 2 cut(s) 251, 1159
BsiHKAI GWGCWC 3 cut(s) 21, 30, 731
BsiSI CCGG 3 cut(s) 668, 766, 959
BslFI GGGAC 4 cut(s) 447, 487, 623, 685
BslI CCNNNNNNNGG 8 cut(s) 90, 334, 431, 470, 471, 650, 813, 921
BsmAI GTCTC 1 cut(s) 828
BsmFI GGGAC 4 cut(s) 447, 487, 623, 685
BsmI GAATGC 1 cut(s) 509
BsnI GGCC 1 cut(s) 312
Bsp119I TTCGAA 1 cut(s) 149
Bsp1286I GDGCHC 3 cut(s) 21, 30, 731
Bsp1407I TGTACA 1 cut(s) 946
Bsp143I GATC 4 cut(s) 136, 699, 988, 1023
BspACI CCGC 5 cut(s) 91, 389, 908, 1011, 1066
BspANI GGCC 1 cut(s) 312
BspCNI CTCAG 3 cut(s) 187, 614, 745
BspFNI CGCG 1 cut(s) 908
BspHI TCATGA 2 cut(s) 133, 1166
BspLI GGNNCC 5 cut(s) 253, 364, 422, 990, 1161
BspMAI CTGCAG 1 cut(s) 1091
BspPI GGATC 4 cut(s) 131, 707, 983, 996
BspT104I TTCGAA 1 cut(s) 149
BspT107I GGYRCC 2 cut(s) 251, 1159
BsrDI GCAATG 2 cut(s) 644, 900
BsrGI TGTACA 1 cut(s) 946
BsrI ACTGG 5 cut(s) 74, 436, 701, 782, 1035
BssECI CCNNGG 5 cut(s) 328, 329, 464, 465, 668
BssMI GATC 4 cut(s) 136, 699, 988, 1023
BssNI GRCGYC 1 cut(s) 252
Bst2UI CCWGG 3 cut(s) 330, 466, 651
Bst4CI ACNGT 5 cut(s) 398, 410, 808, 1018, 1098
Bst6I CTCTTC 1 cut(s) 1068
BstACI GRCGYC 1 cut(s) 252
BstAUI TGTACA 1 cut(s) 946
BstBI TTCGAA 1 cut(s) 149
BstC8I GCNNGC 1 cut(s) 656
BstDEI CTNAG 3 cut(s) 174, 601, 753
BstEII GGTNACC 1 cut(s) 910
BstF5I GGATG 3 cut(s) 475, 848, 967
BstFNI CGCG 1 cut(s) 908
BstH2I RGCGCY 1 cut(s) 255
BstHHI GCGC 2 cut(s) 254, 509
BstKTI GATC 4 cut(s) 139, 702, 991, 1026
BstMAI GTCTC 1 cut(s) 828
BstMBI GATC 4 cut(s) 136, 699, 988, 1023
BstMWI GCNNNNNNNGC 2 cut(s) 25, 655
BstNI CCWGG 3 cut(s) 330, 466, 651
BstPI GGTNACC 1 cut(s) 910
BstSCI CCNGG 4 cut(s) 328, 464, 649, 667
BstSFI CTRYAG 1 cut(s) 1087
BstUI CGCG 1 cut(s) 908
BstV1I GCAGC 1 cut(s) 619
BstV2I GAAGAC 2 cut(s) 399, 589
BstX2I RGATCY 1 cut(s) 988
BstYI RGATCY 1 cut(s) 988
BsuRI GGCC 1 cut(s) 312
BtsCI GGATG 3 cut(s) 475, 848, 967
BtsI GCAGTG 3 cut(s) 776, 1096, 1128
BtsIMutI CAGTG 6 cut(s) 534, 609, 694, 776, 1096, 1128
Cac8I GCNNGC 1 cut(s) 656
CciI TCATGA 2 cut(s) 133, 1166
CfoI GCGC 2 cut(s) 254, 509
Cfr13I GGNCC 1 cut(s) 665
Csp6I GTAC 4 cut(s) 904, 947, 1014, 1160
CviAII CATG 6 cut(s) 134, 257, 524, 593, 659, 1167
CviQI GTAC 4 cut(s) 904, 947, 1014, 1160
DdeI CTNAG 3 cut(s) 174, 601, 753
DinI GGCGCC 1 cut(s) 253
DpnI GATC 4 cut(s) 138, 701, 990, 1025
DpnII GATC 4 cut(s) 136, 699, 988, 1023
DraI TTTAAA 1 cut(s) 837
DriI GACNNNNNGTC 1 cut(s) 593
Eam1104I CTCTTC 1 cut(s) 1068
Eam1105I GACNNNNNGTC 1 cut(s) 593
EarI CTCTTC 1 cut(s) 1068
Ecl136II GAGCTC 2 cut(s) 28, 729
Eco24I GRGCYC 2 cut(s) 30, 731
Eco47I GGWCC 1 cut(s) 665
Eco53kI GAGCTC 2 cut(s) 28, 729
Eco57I CTGAAG 1 cut(s) 60
Eco91I GGTNACC 1 cut(s) 910
EcoICRI GAGCTC 2 cut(s) 28, 729
EcoO65I GGTNACC 1 cut(s) 910
EcoRII CCWGG 3 cut(s) 328, 464, 649
EcoT38I GRGCYC 2 cut(s) 30, 731
EgeI GGCGCC 1 cut(s) 253
EheI GGCGCC 1 cut(s) 253
FaeI CATG 6 cut(s) 137, 260, 527, 596, 662, 1170
FaqI GGGAC 4 cut(s) 447, 487, 623, 685
FatI CATG 6 cut(s) 133, 256, 523, 592, 658, 1166
FauNDI CATATG 1 cut(s) 976
FbaI TGATCA 1 cut(s) 1023
Fnu4HI GCNGC 2 cut(s) 92, 633
FokI GGATG 3 cut(s) 482, 855, 974
FriOI GRGCYC 2 cut(s) 30, 731
Fsp4HI GCNGC 2 cut(s) 92, 633
FspBI CTAG 5 cut(s) 50, 167, 380, 386, 453
FspI TGCGCA 1 cut(s) 508
GlaI GCGC 2 cut(s) 253, 508
GluI GCNGC 2 cut(s) 92, 633
HaeII RGCGCY 1 cut(s) 255
HaeIII GGCC 1 cut(s) 312
HapII CCGG 3 cut(s) 668, 766, 959
HhaI GCGC 2 cut(s) 254, 509
Hin1I GRCGYC 1 cut(s) 252
Hin1II CATG 6 cut(s) 137, 260, 527, 596, 662, 1170
Hin6I GCGC 2 cut(s) 252, 507
HinP1I GCGC 2 cut(s) 252, 507
HindIII AAGCTT 1 cut(s) 1115
HinfI GANTC 5 cut(s) 198, 435, 588, 673, 829
HpaII CCGG 3 cut(s) 668, 766, 959
HphI GGTGA 1 cut(s) 922
Hpy166II GTNNAC 5 cut(s) 377, 665, 947, 949, 1094
Hpy188I TCNGA 1 cut(s) 828
Hpy188III TCNNGA 6 cut(s) 55, 134, 279, 418, 1054, 1167
Hpy8I GTNNAC 5 cut(s) 377, 665, 947, 949, 1094
HpyAV CCTTC 5 cut(s) 7, 140, 285, 944, 1001
HpyCH4III ACNGT 5 cut(s) 398, 410, 808, 1018, 1098
HpyCH4V TGCA 3 cut(s) 584, 658, 1089
HpyF10VI GCNNNNNNNGC 2 cut(s) 25, 655
HpyF3I CTNAG 3 cut(s) 174, 601, 753
Hsp92I GRCGYC 1 cut(s) 252
Hsp92II CATG 6 cut(s) 137, 260, 527, 596, 662, 1170
HspAI GCGC 2 cut(s) 252, 507
KasI GGCGCC 1 cut(s) 251
KpnI GGTACC 1 cut(s) 1163
Ksp22I TGATCA 1 cut(s) 1023
Kzo9I GATC 4 cut(s) 136, 699, 988, 1023
LmnI GCTCC 3 cut(s) 16, 33, 936
Lsp1109I GCAGC 1 cut(s) 619
LweI GCATC 3 cut(s) 78, 179, 833
MaeI CTAG 5 cut(s) 50, 167, 380, 386, 453
MaeIII GTNAC 3 cut(s) 270, 774, 910
MalI GATC 4 cut(s) 138, 701, 990, 1025
MboI GATC 4 cut(s) 136, 699, 988, 1023
MboII GAAGA 9 cut(s) 19, 22, 53, 308, 404, 430, 589, 812, 1085
MflI RGATCY 1 cut(s) 988
MhlI GDGCHC 3 cut(s) 21, 30, 731
MluCI AATT 6 cut(s) 143, 236, 315, 481, 871, 938
Mly113I GGCGCC 1 cut(s) 252
MlyI GAGTC 3 cut(s) 207, 582, 667
MmeI TCCRAC 2 cut(s) 187, 248
MroXI GAANNNNTTC 2 cut(s) 690, 1082
MseI TTAA 4 cut(s) 356, 818, 836, 927
MspI CCGG 3 cut(s) 668, 766, 959
MspR9I CCNGG 4 cut(s) 330, 466, 651, 669
Mva1269I GAATGC 1 cut(s) 509
MvaI CCWGG 3 cut(s) 330, 466, 651
MvnI CGCG 1 cut(s) 908
MwoI GCNNNNNNNGC 2 cut(s) 25, 655
NarI GGCGCC 1 cut(s) 252
NciI CCSGG 1 cut(s) 669
NdeI CATATG 1 cut(s) 976
NdeII GATC 4 cut(s) 136, 699, 988, 1023
NlaIII CATG 6 cut(s) 137, 260, 527, 596, 662, 1170
NlaIV GGNNCC 5 cut(s) 253, 364, 422, 990, 1161
NmeAIII GCCGAG 1 cut(s) 228
NmuCI GTSAC 2 cut(s) 774, 910
NsbI TGCGCA 1 cut(s) 508
NspV TTCGAA 1 cut(s) 149
PagI TCATGA 2 cut(s) 133, 1166
PasI CCCWGGG 2 cut(s) 329, 465
PctI GAATGC 1 cut(s) 509
PdmI GAANNNNTTC 2 cut(s) 690, 1082
PfeI GAWTC 2 cut(s) 435, 829
PflFI GACNNNGTC 1 cut(s) 916
PflMI CCANNNNNTGG 1 cut(s) 921
PkrI GCNGC 2 cut(s) 93, 634
PleI GAGTC 3 cut(s) 206, 582, 667
PluTI GGCGCC 1 cut(s) 255
PpsI GAGTC 3 cut(s) 206, 582, 667
PshBI ATTAAT 1 cut(s) 356
PsiI TTATAA 1 cut(s) 882
Psp124BI GAGCTC 2 cut(s) 30, 731
Psp6I CCWGG 3 cut(s) 328, 464, 649
PspEI GGTNACC 1 cut(s) 910
PspGI CCWGG 3 cut(s) 328, 464, 649
PspN4I GGNNCC 5 cut(s) 253, 364, 422, 990, 1161
PspPI GGNCC 1 cut(s) 665
PstI CTGCAG 1 cut(s) 1091
PsuI RGATCY 1 cut(s) 988
PsyI GACNNNGTC 1 cut(s) 916
RsaI GTAC 4 cut(s) 905, 948, 1015, 1161
RsaNI GTAC 4 cut(s) 904, 947, 1014, 1160
SacI GAGCTC 2 cut(s) 30, 731
SaqAI TTAA 4 cut(s) 356, 818, 836, 927
SatI GCNGC 2 cut(s) 92, 633
Sau3AI GATC 4 cut(s) 136, 699, 988, 1023
Sau96I GGNCC 1 cut(s) 665
SchI GAGTC 3 cut(s) 207, 582, 667
ScrFI CCNGG 4 cut(s) 330, 466, 651, 669
SduI GDGCHC 3 cut(s) 21, 30, 731
SfaNI GCATC 3 cut(s) 78, 179, 833
SfcI CTRYAG 1 cut(s) 1087
SfoI GGCGCC 1 cut(s) 253
SfuI TTCGAA 1 cut(s) 149
SinI GGWCC 1 cut(s) 665
SmlI CTYRAG 1 cut(s) 23
SmoI CTYRAG 1 cut(s) 23
SpeI ACTAGT 1 cut(s) 49
Sse9I AATT 6 cut(s) 143, 236, 315, 481, 871, 938
SsiI CCGC 5 cut(s) 91, 389, 908, 1011, 1066
SspDI GGCGCC 1 cut(s) 251
SspMI CTAG 5 cut(s) 50, 167, 380, 386, 453
SstI GAGCTC 2 cut(s) 30, 731
StyD4I CCNGG 4 cut(s) 328, 464, 649, 667
TaaI ACNGT 5 cut(s) 398, 410, 808, 1018, 1098
TaqI TCGA 4 cut(s) 5, 149, 280, 428
TasI AATT 6 cut(s) 143, 236, 315, 481, 871, 938
TatI WGTACW 1 cut(s) 946
TauI GCSGC 1 cut(s) 94
TfiI GAWTC 2 cut(s) 435, 829
Tru1I TTAA 4 cut(s) 356, 818, 836, 927
Tru9I TTAA 4 cut(s) 356, 818, 836, 927
TscAI CASTG 6 cut(s) 541, 609, 701, 783, 1096, 1135
TseFI GTSAC 2 cut(s) 774, 910
TseI GCWGC 1 cut(s) 632
Tsp45I GTSAC 2 cut(s) 774, 910
TspDTI ATGAA 8 cut(s) 122, 513, 699, 963, 988, 1109, 1155, 1158
TspGWI ACGGA 3 cut(s) 179, 431, 507
TspRI CASTG 6 cut(s) 541, 609, 701, 783, 1096, 1135
Tth111I GACNNNGTC 1 cut(s) 916
Van91I CCANNNNNTGG 1 cut(s) 921
VpaK11BI GGWCC 1 cut(s) 665
VspI ATTAAT 1 cut(s) 356
XapI RAATTY 2 cut(s) 143, 315
XmnI GAANNNNTTC 2 cut(s) 690, 1082
XspI CTAG 5 cut(s) 50, 167, 380, 386, 453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.