Rroxscaffold_4G00279150

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000139
Physical Location & Seq
Reverse (-)
2030695 .. 2033871
3177 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00279150.1

Sequence Viewer

Length: 1236 bp
ATGAGGCGAATTGTCCGAGGTGGGTCGGGTTCTAGAAGATTGCAAAGTATACATAACGGTTTAGTTGGGCTGAGAAGATTGAAGGTGTTGGCAATGTTGAAGAACAAGGAGCACCTTGATCTCCAATATCTCCCTGAAGATGTTGTACTCAACATTCTCTGCCGGTTGCCGGTCAAGTCCTTGATCCGCTTCACTTGTGTCTCAAAACGCTGGCGCTCTCTTATCATTTCCGACCACCAATTTGGCAACTCCCATTTCCAACTAGCAGCATCTCACCTCCGTCATAATGTCTTAATCGTTAACATTTCAAAAGGTACACTCGGACCTTTCAAAAAAAAAAAAGGTACACTCGGAACTATGGTACCCTTTGGATTTCAATCCGTAGAAGATAAATTTTCGATCAAAAATCTCACCTCCCCATTCCAGCGGTGTAGCCAAATTCCAGTAATGGGCTCTTGCAATGGTTTGGTAGTTTTAGCTAATTTCCATCCCTATGTTAGGGTATCTCGATTCCAACCATGTTCTGATGATTTTAATAGTTTGGTAATGTGGAACCCATCAACTGGATTATTCCGCAACATACCTTGTCCAAATTTTCAGATTGGGATGATAAAATTAACAGATGAAGAGAATGGGATCGGTGTATATTATGGTTTTGGTCAAGTGTCGGCCTCTGACGACTACAAACTTGTGGTCATACCAAATTTGGGTGCTTTTATGGAGGTACAAGTGTTCTCAGTCAGAGCCAACTGTTGGAAAGTTGTTAAACCTCCTTACTTGTCGCCATACCGCCCCTGGTCTGAAGAATTGGGGACTTATTCAAATGGAGCGATTCATTGGGTCAGTAACCGTGAGCCTGGGATTTTCGAGCCACCTGTCTATGCTTTTGATCTGGCAAATGAGGAGTTTCGGGAAATGCCATTGCCTGTTCCTAGCCGTAATGAAGATGGCATGGAAATGACGCAAATTAGCACTCAAGTTCTTTTAGGAGGATGTCTTTGTGTGATGTTTCAGGATGTGATGCCTCAGGACGCTAAAAAGTATACTGAATTTTGGATGATGAAAGAGTATGGGCGGCCTGAATCTTGGGTTAAACTCTTTGGGTTTAACATACATGATTTACCAGATGTGTTCGATTCATTCTGTAGCCGCGCTTTTTTGGAATCCTATTTTCATTGCAGAAGACGGTACAGTCGTGATCAAACTGCGTACCCAGAAGGAGTTGATCTGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

411

Amino Acids

47.03

Weight (kDa)

8.87

Isoelectric Point (pI)

50.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 42 - 78 5.3e-08 F-box-like
F-box PF00646 44 - 78 5.6e-11 F-box domain
FBA_3 PF08268 138 - 365 1.2e-09 F-box associated beta propeller domain
FBA_1 PF07734 176 - 379 4.8e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1191
Acc65I GGTACC 1 cut(s) 361
AccB1I GGYRCC 1 cut(s) 361
AccB7I CCANNNNNTGG 2 cut(s) 563, 753
AccI GTMKAC 2 cut(s) 49, 1043
AccII CGCG 1 cut(s) 1152
AciI CCGC 6 cut(s) 187, 427, 574, 790, 1075, 1150
AclWI GGATC 2 cut(s) 178, 644
AcsI RAATTY 5 cut(s) 392, 438, 592, 703, 1049
AcuI CTGAAG 2 cut(s) 156, 822
AfaI GTAC 7 cut(s) 147, 316, 346, 363, 726, 1190, 1211
AfiI CCNNNNNNNGG 6 cut(s) 169, 449, 498, 563, 707, 753
AgsI TTSAA 6 cut(s) 82, 100, 309, 331, 377, 822
AjnI CCWGG 2 cut(s) 794, 856
AluBI AGCT 1 cut(s) 479
AluI AGCT 1 cut(s) 479
Alw21I GWGCWC 1 cut(s) 114
Alw26I GTCTC 1 cut(s) 205
AlwI GGATC 2 cut(s) 178, 644
AoxI GGCC 2 cut(s) 669, 1076
ApeKI GCWGC 1 cut(s) 266
ApoI RAATTY 5 cut(s) 392, 438, 592, 703, 1049
ArsI GACNNNNNNTTYG 4 cut(s) 224, 256, 678, 710
Asp718I GGTACC 1 cut(s) 361
AspLEI GCGC 2 cut(s) 216, 1154
AspS9I GGNCC 1 cut(s) 323
AsuHPI GGTGA 2 cut(s) 266, 403
AvaII GGWCC 1 cut(s) 323
AxyI CCTNAGG 1 cut(s) 1026
BaeI ACNNNNGTAYC 6 cut(s) 345, 378, 716, 749, 1180, 1213
BanI GGYRCC 1 cut(s) 361
BanII GRGCYC 1 cut(s) 455
BarI GAAGNNNNNNTAC 2 cut(s) 129, 161
BbsI GAAGAC 1 cut(s) 1189
Bbv12I GWGCWC 1 cut(s) 114
BbvI GCAGC 1 cut(s) 278
BccI CCATC 3 cut(s) 495, 565, 941
BceAI ACGGC 1 cut(s) 921
BciT130I CCWGG 2 cut(s) 796, 858
BclI TGATCA 1 cut(s) 1198
BcoDI GTCTC 1 cut(s) 205
BfaI CTAG 3 cut(s) 33, 263, 933
BfmI CTRYAG 1 cut(s) 1144
BfoI RGCGCY 1 cut(s) 217
BisI GCNGC 3 cut(s) 267, 1076, 1150
BlsI GCNGC 3 cut(s) 268, 1077, 1151
Bme1390I CCNGG 2 cut(s) 796, 858
Bme18I GGWCC 1 cut(s) 323
BmgT120I GGNCC 1 cut(s) 323
BmiI GGNNCC 2 cut(s) 363, 554
BmrFI CCNGG 2 cut(s) 796, 858
BmsI GCATC 2 cut(s) 278, 1011
BpiI GAAGAC 1 cut(s) 1189
BpuEI CTTGAG 1 cut(s) 960
BsaBI GATNNNNATC 1 cut(s) 376
BsaJI CCNNGG 3 cut(s) 16, 794, 857
Bsc4I CCNNNNNNNGG 6 cut(s) 169, 449, 498, 563, 707, 753
Bse118I RCCGGY 2 cut(s) 162, 169
Bse1I ACTGG 2 cut(s) 443, 568
Bse21I CCTNAGG 1 cut(s) 1026
Bse3DI GCAATG 4 cut(s) 99, 466, 920, 1174
Bse8I GATNNNNATC 1 cut(s) 376
BseBI CCWGG 2 cut(s) 796, 858
BseDI CCNNGG 3 cut(s) 16, 794, 857
BseGI GGATG 5 cut(s) 487, 612, 998, 1021, 1062
BseJI GATNNNNATC 1 cut(s) 376
BseLI CCNNNNNNNGG 6 cut(s) 169, 449, 498, 563, 707, 753
BseMI GCAATG 4 cut(s) 99, 466, 920, 1174
BseMII CTCAG 3 cut(s) 62, 750, 1040
BseNI ACTGG 2 cut(s) 443, 568
BseRI GAGGAG 1 cut(s) 917
BseXI GCAGC 1 cut(s) 278
Bsh1236I CGCG 1 cut(s) 1152
BshFI GGCC 2 cut(s) 671, 1078
BshNI GGYRCC 1 cut(s) 361
BsiHKAI GWGCWC 1 cut(s) 114
BsiSI CCGG 2 cut(s) 163, 170
BslFI GGGAC 1 cut(s) 826
BslI CCNNNNNNNGG 6 cut(s) 169, 449, 498, 563, 707, 753
BsmAI GTCTC 1 cut(s) 205
BsmFI GGGAC 1 cut(s) 826
BsnI GGCC 2 cut(s) 671, 1078
Bsp1286I GDGCHC 2 cut(s) 114, 455
Bsp143I GATC 7 cut(s) 118, 183, 399, 636, 889, 1198, 1225
BspACI CCGC 6 cut(s) 187, 427, 574, 790, 1075, 1150
BspANI GGCC 2 cut(s) 671, 1078
BspCNI CTCAG 3 cut(s) 63, 749, 1039
BspFNI CGCG 1 cut(s) 1152
BspLI GGNNCC 2 cut(s) 363, 554
BspPI GGATC 2 cut(s) 178, 644
BspT107I GGYRCC 1 cut(s) 361
BsrDI GCAATG 4 cut(s) 99, 466, 920, 1174
BsrFI RCCGGY 2 cut(s) 162, 169
BsrI ACTGG 2 cut(s) 443, 568
BssAI RCCGGY 2 cut(s) 162, 169
BssECI CCNNGG 3 cut(s) 16, 794, 857
BssMI GATC 7 cut(s) 118, 183, 399, 636, 889, 1198, 1225
BssNAI GTATAC 2 cut(s) 50, 1044
Bst1107I GTATAC 2 cut(s) 50, 1044
Bst2UI CCWGG 2 cut(s) 796, 858
Bst4CI ACNGT 5 cut(s) 59, 752, 851, 1188, 1193
Bst6I CTCTTC 1 cut(s) 621
BstC8I GCNNGC 1 cut(s) 212
BstDEI CTNAG 3 cut(s) 71, 736, 1026
BstENI CCTNNNNNAGG 1 cut(s) 496
BstF5I GGATG 5 cut(s) 487, 612, 998, 1021, 1062
BstFNI CGCG 1 cut(s) 1152
BstH2I RGCGCY 1 cut(s) 217
BstHHI GCGC 2 cut(s) 216, 1154
BstKTI GATC 7 cut(s) 121, 186, 402, 639, 892, 1201, 1228
BstMAI GTCTC 1 cut(s) 205
BstMBI GATC 7 cut(s) 118, 183, 399, 636, 889, 1198, 1225
BstNI CCWGG 2 cut(s) 796, 858
BstSCI CCNGG 2 cut(s) 794, 856
BstSFI CTRYAG 1 cut(s) 1144
BstUI CGCG 1 cut(s) 1152
BstV1I GCAGC 1 cut(s) 278
BstV2I GAAGAC 1 cut(s) 1189
BstXI CCANNNNNNTGG 1 cut(s) 242
BstZ17I GTATAC 2 cut(s) 50, 1044
Bsu36I CCTNAGG 1 cut(s) 1026
BsuRI GGCC 2 cut(s) 671, 1078
BtsCI GGATG 5 cut(s) 487, 612, 998, 1021, 1062
Cac8I GCNNGC 1 cut(s) 212
CfoI GCGC 2 cut(s) 216, 1154
Cfr10I RCCGGY 2 cut(s) 162, 169
Cfr13I GGNCC 1 cut(s) 323
CseI GACGC 2 cut(s) 970, 1040
Csp6I GTAC 7 cut(s) 146, 315, 345, 362, 725, 1189, 1210
CviAII CATG 3 cut(s) 519, 952, 1115
CviQI GTAC 7 cut(s) 146, 315, 345, 362, 725, 1189, 1210
DdeI CTNAG 3 cut(s) 71, 736, 1026
DpnI GATC 7 cut(s) 120, 185, 401, 638, 891, 1200, 1227
DpnII GATC 7 cut(s) 118, 183, 399, 636, 889, 1198, 1225
DrdI GACNNNNNNGTC 1 cut(s) 1191
DseDI GACNNNNNNGTC 1 cut(s) 1191
Eam1104I CTCTTC 1 cut(s) 621
EarI CTCTTC 1 cut(s) 621
Eco24I GRGCYC 1 cut(s) 455
Eco47I GGWCC 1 cut(s) 323
Eco57I CTGAAG 2 cut(s) 156, 822
Eco81I CCTNAGG 1 cut(s) 1026
EcoNI CCTNNNNNAGG 1 cut(s) 496
EcoRII CCWGG 2 cut(s) 794, 856
EcoT38I GRGCYC 1 cut(s) 455
FaeI CATG 3 cut(s) 522, 955, 1118
FaqI GGGAC 1 cut(s) 826
FatI CATG 3 cut(s) 518, 951, 1114
FbaI TGATCA 1 cut(s) 1198
FblI GTMKAC 2 cut(s) 49, 1043
Fnu4HI GCNGC 3 cut(s) 267, 1076, 1150
FokI GGATG 5 cut(s) 474, 619, 1005, 1028, 1069
FriOI GRGCYC 1 cut(s) 455
Fsp4HI GCNGC 3 cut(s) 267, 1076, 1150
FspBI CTAG 3 cut(s) 33, 263, 933
GlaI GCGC 2 cut(s) 215, 1153
GluI GCNGC 3 cut(s) 267, 1076, 1150
HaeII RGCGCY 1 cut(s) 217
HaeIII GGCC 2 cut(s) 671, 1078
HapII CCGG 2 cut(s) 163, 170
HgaI GACGC 2 cut(s) 970, 1040
HhaI GCGC 2 cut(s) 216, 1154
Hin1II CATG 3 cut(s) 522, 955, 1118
Hin6I GCGC 2 cut(s) 214, 1152
HinP1I GCGC 2 cut(s) 214, 1152
HincII GTYRAC 1 cut(s) 301
HindII GTYRAC 1 cut(s) 301
HinfI GANTC 5 cut(s) 510, 832, 1082, 1136, 1163
HpaI GTTAAC 1 cut(s) 301
HpaII CCGG 2 cut(s) 163, 170
HphI GGTGA 2 cut(s) 266, 403
Hpy166II GTNNAC 5 cut(s) 50, 301, 317, 347, 1044
Hpy188I TCNGA 9 cut(s) 17, 232, 323, 353, 526, 600, 676, 743, 802
Hpy188III TCNNGA 7 cut(s) 33, 507, 911, 1013, 1028, 1196, 1229
Hpy8I GTNNAC 5 cut(s) 50, 301, 317, 347, 1044
HpyAV CCTTC 2 cut(s) 76, 1211
HpyCH4III ACNGT 5 cut(s) 59, 752, 851, 1188, 1193
HpyCH4V TGCA 3 cut(s) 43, 459, 1179
HpyF3I CTNAG 3 cut(s) 71, 736, 1026
Hsp92II CATG 3 cut(s) 522, 955, 1118
HspAI GCGC 2 cut(s) 214, 1152
KpnI GGTACC 1 cut(s) 365
Ksp22I TGATCA 1 cut(s) 1198
KspAI GTTAAC 1 cut(s) 301
Kzo9I GATC 7 cut(s) 118, 183, 399, 636, 889, 1198, 1225
LmnI GCTCC 2 cut(s) 109, 827
Lsp1109I GCAGC 1 cut(s) 278
LweI GCATC 2 cut(s) 278, 1011
MaeI CTAG 3 cut(s) 33, 263, 933
MaeIII GTNAC 1 cut(s) 845
MalI GATC 7 cut(s) 120, 185, 401, 638, 891, 1200, 1227
MboI GATC 7 cut(s) 118, 183, 399, 636, 889, 1198, 1225
MboII GAAGA 9 cut(s) 48, 87, 112, 149, 398, 638, 815, 956, 1194
MhlI GDGCHC 2 cut(s) 114, 455
MmeI TCCRAC 4 cut(s) 255, 283, 538, 734
MnlI CCTC 9 cut(s) 11, 287, 424, 682, 715, 780, 895, 983, 1035
MseI TTAA 8 cut(s) 293, 300, 534, 617, 765, 1092, 1107, 1234
MslI CAYNNNNRTG 2 cut(s) 492, 956
MspA1I CMGCKG 1 cut(s) 427
MspI CCGG 2 cut(s) 163, 170
MspR9I CCNGG 2 cut(s) 796, 858
MvaI CCWGG 2 cut(s) 796, 858
MvnI CGCG 1 cut(s) 1152
NdeII GATC 7 cut(s) 118, 183, 399, 636, 889, 1198, 1225
NlaIII CATG 3 cut(s) 522, 955, 1118
NlaIV GGNNCC 2 cut(s) 363, 554
PcsI WCGNNNNNNNCGW 1 cut(s) 1192
PfeI GAWTC 5 cut(s) 510, 832, 1082, 1136, 1163
PflMI CCANNNNNTGG 2 cut(s) 563, 753
PkrI GCNGC 3 cut(s) 268, 1077, 1151
Psp6I CCWGG 2 cut(s) 794, 856
PspGI CCWGG 2 cut(s) 794, 856
PspN4I GGNNCC 2 cut(s) 363, 554
PspPI GGNCC 1 cut(s) 323
RsaI GTAC 7 cut(s) 147, 316, 346, 363, 726, 1190, 1211
RsaNI GTAC 7 cut(s) 146, 315, 345, 362, 725, 1189, 1210
RseI CAYNNNNRTG 2 cut(s) 492, 956
SaqAI TTAA 8 cut(s) 293, 300, 534, 617, 765, 1092, 1107, 1234
SatI GCNGC 3 cut(s) 267, 1076, 1150
Sau3AI GATC 7 cut(s) 118, 183, 399, 636, 889, 1198, 1225
Sau96I GGNCC 1 cut(s) 323
ScrFI CCNGG 2 cut(s) 796, 858
SduI GDGCHC 2 cut(s) 114, 455
SfaNI GCATC 2 cut(s) 278, 1011
SfcI CTRYAG 1 cut(s) 1144
SinI GGWCC 1 cut(s) 323
SmiMI CAYNNNNRTG 2 cut(s) 492, 956
SmlI CTYRAG 1 cut(s) 975
SmoI CTYRAG 1 cut(s) 975
SsiI CCGC 6 cut(s) 187, 427, 574, 790, 1075, 1150
SspMI CTAG 3 cut(s) 33, 263, 933
StyD4I CCNGG 2 cut(s) 794, 856
TaaI ACNGT 5 cut(s) 59, 752, 851, 1188, 1193
TaqI TCGA 4 cut(s) 398, 508, 867, 1134
TatI WGTACW 1 cut(s) 145
TauI GCSGC 2 cut(s) 1078, 1152
TfiI GAWTC 5 cut(s) 510, 832, 1082, 1136, 1163
Tru1I TTAA 8 cut(s) 293, 300, 534, 617, 765, 1092, 1107, 1234
Tru9I TTAA 8 cut(s) 293, 300, 534, 617, 765, 1092, 1107, 1234
TseI GCWGC 1 cut(s) 266
TspDTI ATGAA 6 cut(s) 639, 824, 957, 1076, 1128, 1163
TspGWI ACGGA 2 cut(s) 269, 370
Van91I CCANNNNNTGG 2 cut(s) 563, 753
VpaK11BI GGWCC 1 cut(s) 323
XagI CCTNNNNNAGG 1 cut(s) 496
XapI RAATTY 5 cut(s) 392, 438, 592, 703, 1049
XbaI TCTAGA 1 cut(s) 32
XcmI CCANNNNNNNNNTGG 1 cut(s) 792
XmiI GTMKAC 2 cut(s) 49, 1043
XspI CTAG 3 cut(s) 33, 263, 933
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.