Rmu_sc0005762.1_g000005

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005762.1
OG0000139
Physical Location & Seq
Forward (+)
17223 .. 18446
1224 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005762.1_g000005.1.cds

Sequence Viewer

Length: 1224 bp
atgtcaatgtcaaagacacaagaggagagctttgatctccatgaagatgttatagtgaaaattctttgccggttgccggtcaagtccttgatccggttcgcttgtgtgtcgaaacgatggcgttctattatcatttctgatcctcaatttggcaagtctcaccttcaactagcatcacagcagggagccctccgtcgaaaactcctcatctccacctaccctacagttaaaaccgtacaaggtcaaattcccgatcgttttgaagataacatgccttggttgccctctcaatttcaatccttccaaggttattcttcagtcaataatctcaccttcccatcggtggagaagagccaacgagtaatggcctcgtgcaatggtttagtacttctaggcgaatcctataaaaattcttttaagaacttgtctatctggaatccatcaactggattttttcgcaaaatacctagtccaagttttgggcgtgacatgacaaaatcaacagagaagaaaaagaaccgtagctttttatatcatggttttggtcaagtttcagcctctgacgactacaagcttgttttcataaaacctgcccttggtgattttgtggatgttcatgtcttctcactcagagccaacgtttggaaagttattaaagctccctcttcattgactggctcgattgacgaacaggggactctttcaaatggagcgattcattgggtcaactatcccatagatggtgaaatggatcgaactttgtttgacccaactctggttgcttttaatttagcagaggaggagttccggcaagtgccattgcctgttctcaaccacaatgatggtggcatgtgtctgaatctgagacatgtaagaattcagattcttttaggaggatgcctttgtgtatggtctcgggatctttatgcgaatagtgaattttgggtgatgagagagtatggtgtgcctgaatcttgggttaaactcattcaatttggtccacttgattcaccagttgcgttcattatctgggatcctagttacgttaccgaaggcggtattgttatgatcaaactgcttgacaagaaggagttggtctggattgaatgccatcaaggagagagtccagtctgcagcgctcactatagacttgaggaggtgcctgggtgtacgatatttgacgcgactgtatatgatgaaactttagtttcggtacctgaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

407

Amino Acids

46.13

Weight (kDa)

6.52

Isoelectric Point (pI)

52.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 598
Acc65I GGTACC 1 cut(s) 1213
AccB1I GGYRCC 2 cut(s) 1159, 1213
AccB7I CCANNNNNTGG 3 cut(s) 446, 479, 642
AccII CGCG 1 cut(s) 1184
AciI CCGC 1 cut(s) 1056
AclI AACGTT 1 cut(s) 639
AclWI GGATC 6 cut(s) 85, 134, 759, 927, 1028, 1041
AcsI RAATTY 5 cut(s) 60, 246, 409, 876, 938
AcuI CTGAAG 1 cut(s) 300
AfaI GTAC 4 cut(s) 237, 387, 1171, 1215
AfeI AGCGCT 1 cut(s) 1138
AflIII ACRYGT 1 cut(s) 868
AgsI TTSAA 6 cut(s) 167, 263, 296, 705, 992, 1106
AjnI CCWGG 1 cut(s) 1162
AluBI AGCT 4 cut(s) 30, 525, 574, 659
AluI AGCT 4 cut(s) 30, 525, 574, 659
Alw26I GTCTC 3 cut(s) 162, 859, 918
AlwI GGATC 6 cut(s) 85, 134, 759, 927, 1028, 1041
AlwNI CAGNNNCTG 1 cut(s) 560
Ama87I CYCGRG 1 cut(s) 915
Aor51HI AGCGCT 1 cut(s) 1138
AoxI GGCC 1 cut(s) 366
ApeKI GCWGC 1 cut(s) 1134
ApoI RAATTY 5 cut(s) 60, 246, 409, 876, 938
Asp718I GGTACC 1 cut(s) 1213
AspLEI GCGC 1 cut(s) 1139
AspS9I GGNCC 1 cut(s) 998
AsuHPI GGTGA 6 cut(s) 152, 322, 611, 755, 958, 1002
AvaI CYCGRG 1 cut(s) 915
AvaII GGWCC 1 cut(s) 998
BamHI GGATCC 1 cut(s) 1033
BanI GGYRCC 2 cut(s) 1159, 1213
BanII GRGCYC 1 cut(s) 190
BauI CACGAG 1 cut(s) 370
BbsI GAAGAC 1 cut(s) 613
BbvI GCAGC 1 cut(s) 1146
BccI CCATC 6 cut(s) 111, 346, 448, 734, 836, 1119
BciT130I CCWGG 1 cut(s) 1164
BclI TGATCA 1 cut(s) 1068
BcoDI GTCTC 3 cut(s) 162, 859, 918
BfaI CTAG 4 cut(s) 170, 392, 468, 1038
BfmI CTRYAG 3 cut(s) 222, 1132, 1144
BfoI RGCGCY 1 cut(s) 1140
BfuAI ACCTGC 1 cut(s) 598
BisI GCNGC 1 cut(s) 1135
BlsI GCNGC 1 cut(s) 1136
BmcAI AGTACT 1 cut(s) 387
Bme1390I CCNGG 1 cut(s) 1164
Bme18I GGWCC 1 cut(s) 998
BmeT110I CYCGRG 1 cut(s) 915
BmgT120I GGNCC 1 cut(s) 998
BmiI GGNNCC 4 cut(s) 187, 1035, 1161, 1215
BmrFI CCNGG 1 cut(s) 1164
BmsI GCATC 2 cut(s) 182, 887
BpiI GAAGAC 1 cut(s) 613
BpuEI CTTGAG 1 cut(s) 1172
BsaI GGTCTC 1 cut(s) 918
BsaJI CCNNGG 4 cut(s) 275, 304, 595, 1163
BsaWI WCCGGW 1 cut(s) 93
Bse118I RCCGGY 2 cut(s) 69, 76
Bse1I ACTGG 4 cut(s) 451, 679, 1013, 1127
Bse3DI GCAATG 2 cut(s) 382, 818
BseBI CCWGG 1 cut(s) 1164
BseDI CCNNGG 4 cut(s) 275, 304, 595, 1163
BseGI GGATG 2 cut(s) 616, 902
BseMI GCAATG 2 cut(s) 382, 818
BseMII CTCAG 2 cut(s) 643, 854
BseNI ACTGG 4 cut(s) 451, 679, 1013, 1127
BseRI GAGGAG 5 cut(s) 38, 194, 812, 815, 1169
BseXI GCAGC 1 cut(s) 1146
Bsh1236I CGCG 1 cut(s) 1184
Bsh1285I CGRYCG 1 cut(s) 256
BshFI GGCC 1 cut(s) 368
BshNI GGYRCC 2 cut(s) 1159, 1213
BsiEI CGRYCG 1 cut(s) 256
BsiHKCI CYCGRG 1 cut(s) 915
BsiSI CCGG 4 cut(s) 70, 77, 94, 808
BslFI GGGAC 1 cut(s) 709
BsmAI GTCTC 3 cut(s) 162, 859, 918
BsmFI GGGAC 1 cut(s) 709
BsmI GAATGC 1 cut(s) 1112
BsnI GGCC 1 cut(s) 368
Bso31I GGTCTC 1 cut(s) 918
BsoBI CYCGRG 1 cut(s) 915
Bsp1286I GDGCHC 1 cut(s) 190
Bsp143I GATC 8 cut(s) 34, 90, 139, 253, 751, 919, 1033, 1068
BspACI CCGC 1 cut(s) 1056
BspANI GGCC 1 cut(s) 368
BspCNI CTCAG 2 cut(s) 642, 855
BspFNI CGCG 1 cut(s) 1184
BspLI GGNNCC 4 cut(s) 187, 1035, 1161, 1215
BspMAI CTGCAG 1 cut(s) 1136
BspMI ACCTGC 1 cut(s) 598
BspPI GGATC 6 cut(s) 85, 134, 759, 927, 1028, 1041
BspQI GCTCTTC 1 cut(s) 344
BspT107I GGYRCC 2 cut(s) 1159, 1213
BspTNI GGTCTC 1 cut(s) 918
BsrDI GCAATG 2 cut(s) 382, 818
BsrFI RCCGGY 2 cut(s) 69, 76
BsrI ACTGG 4 cut(s) 451, 679, 1013, 1127
BssAI RCCGGY 2 cut(s) 69, 76
BssECI CCNNGG 4 cut(s) 275, 304, 595, 1163
BssMI GATC 8 cut(s) 34, 90, 139, 253, 751, 919, 1033, 1068
BssSI CACGAG 1 cut(s) 370
BssT1I CCWWGG 3 cut(s) 275, 304, 595
Bst2BI CACGAG 1 cut(s) 370
Bst2UI CCWGG 1 cut(s) 1164
Bst4CI ACNGT 4 cut(s) 226, 235, 521, 1189
Bst6I CTCTTC 2 cut(s) 344, 670
BstDEI CTNAG 2 cut(s) 629, 863
BstF5I GGATG 2 cut(s) 616, 902
BstFNI CGCG 1 cut(s) 1184
BstH2I RGCGCY 1 cut(s) 1140
BstHHI GCGC 1 cut(s) 1139
BstKTI GATC 8 cut(s) 37, 93, 142, 256, 754, 922, 1036, 1071
BstMAI GTCTC 3 cut(s) 162, 859, 918
BstMBI GATC 8 cut(s) 34, 90, 139, 253, 751, 919, 1033, 1068
BstMCI CGRYCG 1 cut(s) 256
BstMWI GCNNNNNNNGC 1 cut(s) 280
BstNI CCWGG 1 cut(s) 1164
BstNSI RCATGY 3 cut(s) 274, 853, 872
BstSCI CCNGG 1 cut(s) 1162
BstSFI CTRYAG 3 cut(s) 222, 1132, 1144
BstUI CGCG 1 cut(s) 1184
BstV1I GCAGC 1 cut(s) 1146
BstV2I GAAGAC 1 cut(s) 613
BstX2I RGATCY 2 cut(s) 919, 1033
BstXI CCANNNNNNTGG 1 cut(s) 842
BstYI RGATCY 2 cut(s) 919, 1033
BsuRI GGCC 1 cut(s) 368
BtsCI GGATG 2 cut(s) 616, 902
BveI ACCTGC 1 cut(s) 598
CaiI CAGNNNCTG 1 cut(s) 560
CfoI GCGC 1 cut(s) 1139
Cfr10I RCCGGY 2 cut(s) 69, 76
Cfr13I GGNCC 1 cut(s) 998
CseI GACGC 1 cut(s) 1190
Csp6I GTAC 4 cut(s) 236, 386, 1170, 1214
CspCI CAANNNNNGTGG 2 cut(s) 826, 861
CviAII CATG 7 cut(s) 41, 271, 490, 536, 617, 850, 869
CviQI GTAC 4 cut(s) 236, 386, 1170, 1214
DdeI CTNAG 2 cut(s) 629, 863
DpnI GATC 8 cut(s) 36, 92, 141, 255, 753, 921, 1035, 1070
DpnII GATC 8 cut(s) 34, 90, 139, 253, 751, 919, 1033, 1068
Eam1104I CTCTTC 2 cut(s) 344, 670
EarI CTCTTC 2 cut(s) 344, 670
Eco130I CCWWGG 3 cut(s) 275, 304, 595
Eco24I GRGCYC 1 cut(s) 190
Eco31I GGTCTC 1 cut(s) 918
Eco47I GGWCC 1 cut(s) 998
Eco47III AGCGCT 1 cut(s) 1138
Eco57I CTGAAG 1 cut(s) 300
Eco88I CYCGRG 1 cut(s) 915
EcoRI GAATTC 1 cut(s) 876
EcoRII CCWGG 1 cut(s) 1162
EcoT14I CCWWGG 3 cut(s) 275, 304, 595
EcoT38I GRGCYC 1 cut(s) 190
ErhI CCWWGG 3 cut(s) 275, 304, 595
FaeI CATG 7 cut(s) 44, 274, 493, 539, 620, 853, 872
FaqI GGGAC 1 cut(s) 709
FatI CATG 7 cut(s) 40, 270, 489, 535, 616, 849, 868
FbaI TGATCA 1 cut(s) 1068
Fnu4HI GCNGC 1 cut(s) 1135
FokI GGATG 2 cut(s) 623, 909
FriOI GRGCYC 1 cut(s) 190
Fsp4HI GCNGC 1 cut(s) 1135
FspBI CTAG 4 cut(s) 170, 392, 468, 1038
GlaI GCGC 1 cut(s) 1138
GluI GCNGC 1 cut(s) 1135
HaeII RGCGCY 1 cut(s) 1140
HaeIII GGCC 1 cut(s) 368
HapII CCGG 4 cut(s) 70, 77, 94, 808
HgaI GACGC 1 cut(s) 1190
HhaI GCGC 1 cut(s) 1139
Hin1II CATG 7 cut(s) 44, 274, 493, 539, 620, 853, 872
Hin6I GCGC 1 cut(s) 1137
HinP1I GCGC 1 cut(s) 1137
HincII GTYRAC 1 cut(s) 727
HindII GTYRAC 1 cut(s) 727
HindIII AAGCTT 1 cut(s) 572
HinfI GANTC 9 cut(s) 398, 436, 697, 715, 859, 883, 971, 1007, 1123
HpaII CCGG 4 cut(s) 70, 77, 94, 808
HphI GGTGA 6 cut(s) 152, 322, 611, 755, 958, 1002
Hpy166II GTNNAC 3 cut(s) 727, 1001, 1170
Hpy188I TCNGA 6 cut(s) 139, 562, 632, 858, 864, 882
Hpy188III TCNNGA 4 cut(s) 251, 433, 917, 1099
Hpy8I GTNNAC 3 cut(s) 727, 1001, 1170
Hpy99I CGWCG 1 cut(s) 198
HpyAV CCTTC 5 cut(s) 173, 310, 343, 1046, 1081
HpyCH4III ACNGT 4 cut(s) 226, 235, 521, 1189
HpyCH4IV ACGT 2 cut(s) 639, 1044
HpyCH4V TGCA 2 cut(s) 375, 1134
HpyF10VI GCNNNNNNNGC 1 cut(s) 280
HpyF3I CTNAG 2 cut(s) 629, 863
HpySE526I ACGT 2 cut(s) 639, 1044
Hsp92II CATG 7 cut(s) 44, 274, 493, 539, 620, 853, 872
HspAI GCGC 1 cut(s) 1137
KpnI GGTACC 1 cut(s) 1217
Ksp22I TGATCA 1 cut(s) 1068
Kzo9I GATC 8 cut(s) 34, 90, 139, 253, 751, 919, 1033, 1068
LguI GCTCTTC 1 cut(s) 344
LmnI GCTCC 3 cut(s) 185, 664, 710
Lsp1109I GCAGC 1 cut(s) 1146
LweI GCATC 2 cut(s) 182, 887
MaeI CTAG 4 cut(s) 170, 392, 468, 1038
MaeII ACGT 2 cut(s) 639, 1044
MaeIII GTNAC 3 cut(s) 485, 1040, 1045
MalI GATC 8 cut(s) 36, 92, 141, 255, 753, 921, 1035, 1070
MboI GATC 8 cut(s) 34, 90, 139, 253, 751, 919, 1033, 1068
MboII GAAGA 7 cut(s) 56, 275, 306, 361, 520, 613, 657
MflI RGATCY 2 cut(s) 919, 1033
MhlI GDGCHC 1 cut(s) 190
MluCI AATT 9 cut(s) 60, 146, 246, 290, 409, 787, 876, 938, 992
MlyI GAGTC 2 cut(s) 691, 1132
MseI TTAA 5 cut(s) 228, 417, 654, 786, 981
MslI CAYNNNNRTG 2 cut(s) 45, 840
MspI CCGG 4 cut(s) 70, 77, 94, 808
MspR9I CCNGG 1 cut(s) 1164
Mva1269I GAATGC 1 cut(s) 1112
MvaI CCWGG 1 cut(s) 1164
MvnI CGCG 1 cut(s) 1184
MwoI GCNNNNNNNGC 1 cut(s) 280
NdeII GATC 8 cut(s) 34, 90, 139, 253, 751, 919, 1033, 1068
NlaIII CATG 7 cut(s) 44, 274, 493, 539, 620, 853, 872
NlaIV GGNNCC 4 cut(s) 187, 1035, 1161, 1215
NmuCI GTSAC 1 cut(s) 485
NspI RCATGY 3 cut(s) 274, 853, 872
PciI ACATGT 1 cut(s) 868
PciSI GCTCTTC 1 cut(s) 344
PctI GAATGC 1 cut(s) 1112
PfeI GAWTC 7 cut(s) 398, 436, 715, 859, 883, 971, 1007
PflMI CCANNNNNTGG 3 cut(s) 446, 479, 642
PkrI GCNGC 1 cut(s) 1136
Ple19I CGATCG 1 cut(s) 256
PleI GAGTC 2 cut(s) 691, 1131
PpsI GAGTC 2 cut(s) 691, 1131
PscI ACATGT 1 cut(s) 868
Psp1406I AACGTT 1 cut(s) 639
Psp6I CCWGG 1 cut(s) 1162
PspGI CCWGG 1 cut(s) 1162
PspN4I GGNNCC 4 cut(s) 187, 1035, 1161, 1215
PspPI GGNCC 1 cut(s) 998
PstI CTGCAG 1 cut(s) 1136
PstNI CAGNNNCTG 1 cut(s) 560
PsuI RGATCY 2 cut(s) 919, 1033
PvuI CGATCG 1 cut(s) 256
RsaI GTAC 4 cut(s) 237, 387, 1171, 1215
RsaNI GTAC 4 cut(s) 236, 386, 1170, 1214
RseI CAYNNNNRTG 2 cut(s) 45, 840
SapI GCTCTTC 1 cut(s) 344
SaqAI TTAA 5 cut(s) 228, 417, 654, 786, 981
SatI GCNGC 1 cut(s) 1135
Sau3AI GATC 8 cut(s) 34, 90, 139, 253, 751, 919, 1033, 1068
Sau96I GGNCC 1 cut(s) 998
ScaI AGTACT 1 cut(s) 387
SchI GAGTC 2 cut(s) 691, 1132
ScrFI CCNGG 1 cut(s) 1164
SduI GDGCHC 1 cut(s) 190
SfaNI GCATC 2 cut(s) 182, 887
SfcI CTRYAG 3 cut(s) 222, 1132, 1144
SinI GGWCC 1 cut(s) 998
SmiMI CAYNNNNRTG 2 cut(s) 45, 840
SmlI CTYRAG 1 cut(s) 1151
SmoI CTYRAG 1 cut(s) 1151
Sse9I AATT 9 cut(s) 60, 146, 246, 290, 409, 787, 876, 938, 992
SsiI CCGC 1 cut(s) 1056
SspMI CTAG 4 cut(s) 170, 392, 468, 1038
StyD4I CCNGG 1 cut(s) 1162
StyI CCWWGG 3 cut(s) 275, 304, 595
TaaI ACNGT 4 cut(s) 226, 235, 521, 1189
TaiI ACGT 2 cut(s) 642, 1047
TaqI TCGA 4 cut(s) 110, 196, 680, 754
TasI AATT 9 cut(s) 60, 146, 246, 290, 409, 787, 876, 938, 992
TatI WGTACW 1 cut(s) 385
TfiI GAWTC 7 cut(s) 398, 436, 715, 859, 883, 971, 1007
Tru1I TTAA 5 cut(s) 228, 417, 654, 786, 981
Tru9I TTAA 5 cut(s) 228, 417, 654, 786, 981
TseFI GTSAC 1 cut(s) 485
TseI GCWGC 1 cut(s) 1134
Tsp45I GTSAC 1 cut(s) 485
TspDTI ATGAA 7 cut(s) 57, 571, 605, 657, 707, 1012, 1212
TspGWI ACGGA 1 cut(s) 182
Van91I CCANNNNNTGG 3 cut(s) 446, 479, 642
VpaK11BI GGWCC 1 cut(s) 998
XapI RAATTY 5 cut(s) 60, 246, 409, 876, 938
XceI RCATGY 3 cut(s) 274, 853, 872
XcmI CCANNNNNNNNNTGG 1 cut(s) 842
XspI CTAG 4 cut(s) 170, 392, 468, 1038
ZrmI AGTACT 1 cut(s) 387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.