Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010684.1

Orthogroup ID

OG0000139

Physical Location & Seq

Genomic Coordinates Forward (+)

7076 .. 9663

Gene Structure 2588 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010684.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

atgatcactggaaaacatggctttggttatgtctcatccactgatgactacattgttttagtaattcccgctagtttctctccagtagatggggatgtcaacatgttcatcttctcaatgagagctaactcttggaaactcagtaaagtctctggctggttttcactcagctacggccggacaagccagtctgggactcttttaaatgaagcaatccattgggctaactatcacagatattatagggatggcggattgattgaacaaatgcaaatttatgcttttgatttggcgaatgaggagtcacggcaacagcccgttccttgttttaaccaagatgataatggaaacggtgtagaaatgcagactgtggaccacttaggaggctgcctttgctttgaaactttgaatgatttaccagaggtgtttgattcttacagtagttggttacctatatttgttacagaagatgggacagttgtgattaaactcattgtcgagaaggagttggtcaggattgaatgccgcaaagaagagaagccggagagcaccaacctcgtcacaaggttcttttctctgccttccgaaaaaggacttcttgtcttacgggtaagggctttggttgtgatctcttcgagtcaccgaattgatactcaacgttgtaggttgagcagagcaatcactggtaagtttggagaaagcacgggtttgctaaagcgtatctttagcttcgctgggttgcgagggccggcttgggttttaatcgggtgcaacaagcttgccgagaagttgaagtatgatgaccctttggaggctgcacagcttcatggagggtgtggtacgtgggggatcatattcacggccttgtttgccaagaaggcttatgttaatgaggtctatcctgggcacccggagaggccatttgggctgtttatgggaggcggcgccaaactgttagctgcgcatttggtgcggattgtggtggttgctgtgtttgtgagtgtgacgatggggacattgtttttcttgctgcacaagttgaagctgttgaggatttcatcagacgaggaaatggcaggaatggatgtgacgagtcatggaggattggcttatgtctatactgatgaaagtggcatgaaatctagatatatggtgtctaacactggtcctccacatgtttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008519 GO:0009506 GO:0015075 GO:0015291 GO:0015398 GO:0015695 GO:0015696 GO:0016020 GO:0016021 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0031226 GO:0034220 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072488 GO:0098655

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ammonium_transp

Protein Analysis

393

Amino Acids

43.72

Weight (kDa)

6.6

Isoelectric Point (pI)

31.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000139)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica	Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis	pycom15g26480
rosa_chinensis	RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata	RLG00000027157 RLG00000036604
rosa_multiflora	Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa	Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha	Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana	Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	187
Acc16I	TGCGCA	1 cut(s)	963
AccB1I	GGYRCC	2 cut(s)	906, 944
AccB7I	CCANNNNNTGG	1 cut(s)	89
AciI	CCGC	5 cut(s)	69, 252, 526, 942, 973
AclI	AACGTT	1 cut(s)	658
AclWI	GGATC	1 cut(s)	857
AcoI	YGGCCR	1 cut(s)	175
AcsI	RAATTY	1 cut(s)	273
AcyI	GRCGYC	1 cut(s)	945
AfaI	GTAC	1 cut(s)	841
AfiI	CCNNNNNNNGG	2 cut(s)	89, 811
AflIII	ACRYGT	2 cut(s)	102, 1174
AgsI	TTSAA	6 cut(s)	263, 401, 409, 521, 793, 1042
AhdI	GACNNNNNGTC	1 cut(s)	599
AjnI	CCWGG	1 cut(s)	901
AluBI	AGCT	7 cut(s)	125, 171, 729, 778, 823, 959, 1045
AluI	AGCT	7 cut(s)	125, 171, 729, 778, 823, 959, 1045
Alw21I	GWGCWC	1 cut(s)	551
Alw26I	GTCTC	2 cut(s)	37, 154
AlwI	GGATC	1 cut(s)	857
AoxI	GGCC	4 cut(s)	175, 746, 861, 917
ApeKI	GCWGC	4 cut(s)	387, 815, 959, 1030
ApoI	RAATTY	1 cut(s)	273
ArsI	GACNNNNNNTTYG	2 cut(s)	287, 319
AspLEI	GCGC	2 cut(s)	947, 964
AspS9I	GGNCC	3 cut(s)	373, 746, 1166
AsuC2I	CCSGG	1 cut(s)	911
AsuHPI	GGTGA	1 cut(s)	632
AvaII	GGWCC	2 cut(s)	373, 1166
BaeGI	GKGCMC	1 cut(s)	909
BanI	GGYRCC	2 cut(s)	906, 944
Bbv12I	GWGCWC	1 cut(s)	551
BbvI	GCAGC	4 cut(s)	374, 802, 946, 1017
BccI	CCATC	4 cut(s)	83, 242, 464, 1003
BceAI	ACGGC	3 cut(s)	190, 323, 876
BcgI	CGANNNNNNTGC	2 cut(s)	538, 572
BciT130I	CCWGG	1 cut(s)	903
BclI	TGATCA	1 cut(s)	3
BcnI	CCSGG	1 cut(s)	911
BcoDI	GTCTC	2 cut(s)	37, 154
BfaI	CTAG	2 cut(s)	72, 1143
BfoI	RGCGCY	1 cut(s)	948
BglI	GCCNNNNNGGC	2 cut(s)	878, 925
BisI	GCNGC	6 cut(s)	388, 526, 816, 943, 960, 1031
BlsI	GCNGC	6 cut(s)	389, 527, 817, 944, 961, 1032
Bme1390I	CCNGG	2 cut(s)	903, 911
Bme18I	GGWCC	2 cut(s)	373, 1166
BmeRI	GACNNNNNGTC	1 cut(s)	599
BmgT120I	GGNCC	3 cut(s)	373, 746, 1166
BmiI	GGNNCC	2 cut(s)	908, 946
BmrFI	CCNGG	2 cut(s)	903, 911
BpmI	CTGGAG	1 cut(s)	66
BpuMI	CCSGG	1 cut(s)	911
BsaAI	YACGTR	1 cut(s)	843
BsaHI	GRCGYC	1 cut(s)	945
BsaJI	CCNNGG	1 cut(s)	902
BsaXI	ACNNNNNCTCC	1 cut(s)	1153
Bsc4I	CCNNNNNNNGG	2 cut(s)	89, 811
Bse118I	RCCGGY	1 cut(s)	748
Bse1I	ACTGG	5 cut(s)	13, 83, 187, 688, 1168
BseBI	CCWGG	1 cut(s)	903
BseDI	CCNNGG	1 cut(s)	902
BseGI	GGATG	4 cut(s)	35, 100, 253, 1090
BseLI	CCNNNNNNNGG	2 cut(s)	89, 811
BseMII	CTCAG	2 cut(s)	154, 181
BseNI	ACTGG	5 cut(s)	13, 83, 187, 688, 1168
BseRI	GAGGAG	1 cut(s)	314
BseSI	GKGCMC	1 cut(s)	909
BseX3I	CGGCCG	1 cut(s)	175
BseXI	GCAGC	4 cut(s)	374, 802, 946, 1017
BseYI	CCCAGC	1 cut(s)	734
BsgI	GTGCAG	2 cut(s)	801, 1016
Bsh1285I	CGRYCG	1 cut(s)	178
BshFI	GGCC	4 cut(s)	177, 748, 863, 919
BshNI	GGYRCC	2 cut(s)	906, 944
BsiEI	CGRYCG	1 cut(s)	178
BsiHKAI	GWGCWC	1 cut(s)	551
BsiSI	CCGG	4 cut(s)	178, 542, 749, 911
BslFI	GGGAC	3 cut(s)	208, 487, 1027
BslI	CCNNNNNNNGG	2 cut(s)	89, 811
BsmAI	GTCTC	2 cut(s)	37, 154
BsmFI	GGGAC	3 cut(s)	208, 487, 1027
BsmI	GAATGC	1 cut(s)	527
BsnI	GGCC	4 cut(s)	177, 748, 863, 919
Bsp1286I	GDGCHC	2 cut(s)	551, 909
Bsp143I	GATC	3 cut(s)	3, 627, 849
BspACI	CCGC	5 cut(s)	69, 252, 526, 942, 973
BspANI	GGCC	4 cut(s)	177, 748, 863, 919
BspCNI	CTCAG	2 cut(s)	153, 180
BspLI	GGNNCC	2 cut(s)	908, 946
BspPI	GGATC	1 cut(s)	857
BspT107I	GGYRCC	2 cut(s)	906, 944
BsrFI	RCCGGY	1 cut(s)	748
BsrI	ACTGG	5 cut(s)	13, 83, 187, 688, 1168
BssAI	RCCGGY	1 cut(s)	748
BssECI	CCNNGG	1 cut(s)	902
BssMI	GATC	3 cut(s)	3, 627, 849
BssNI	GRCGYC	1 cut(s)	945
Bst2UI	CCWGG	1 cut(s)	903
Bst4CI	ACNGT	5 cut(s)	353, 370, 440, 478, 954
Bst6I	CTCTTC	2 cut(s)	528, 637
BstACI	GRCGYC	1 cut(s)	945
BstAPI	GCANNNNNTGC	1 cut(s)	970
BstBAI	YACGTR	1 cut(s)	843
BstC8I	GCNNGC	2 cut(s)	750, 780
BstDEI	CTNAG	3 cut(s)	140, 167, 379
BstEII	GGTNACC	1 cut(s)	447
BstF5I	GGATG	4 cut(s)	35, 100, 253, 1090
BstH2I	RGCGCY	1 cut(s)	948
BstHHI	GCGC	2 cut(s)	947, 964
BstKTI	GATC	3 cut(s)	6, 630, 852
BstMAI	GTCTC	2 cut(s)	37, 154
BstMBI	GATC	3 cut(s)	3, 627, 849
BstMCI	CGRYCG	1 cut(s)	178
BstMWI	GCNNNNNNNGC	6 cut(s)	183, 393, 869, 878, 925, 970
BstNI	CCWGG	1 cut(s)	903
BstNSI	RCATGY	2 cut(s)	106, 1178
BstPI	GGTNACC	1 cut(s)	447
BstSCI	CCNGG	2 cut(s)	901, 909
BstSLI	GKGCMC	1 cut(s)	909
BstV1I	GCAGC	4 cut(s)	374, 802, 946, 1017
BstZI	CGGCCG	1 cut(s)	175
BsuRI	GGCC	4 cut(s)	177, 748, 863, 919
BtsCI	GGATG	4 cut(s)	35, 100, 253, 1090
BtsIMutI	CAGTG	4 cut(s)	6, 39, 681, 1161
Cac8I	GCNNGC	2 cut(s)	750, 780
CfoI	GCGC	2 cut(s)	947, 964
Cfr10I	RCCGGY	1 cut(s)	748
Cfr13I	GGNCC	3 cut(s)	373, 746, 1166
Csp6I	GTAC	1 cut(s)	840
CviAII	CATG	6 cut(s)	17, 103, 827, 1097, 1135, 1175
CviQI	GTAC	1 cut(s)	840
DdeI	CTNAG	3 cut(s)	140, 167, 379
DinI	GGCGCC	1 cut(s)	946
DpnI	GATC	3 cut(s)	5, 629, 851
DpnII	GATC	3 cut(s)	3, 627, 849
DraI	TTTAAA	1 cut(s)	204
DrdI	GACNNNNNNGTC	1 cut(s)	187
DriI	GACNNNNNGTC	1 cut(s)	599
DseDI	GACNNNNNNGTC	1 cut(s)	187
EaeI	YGGCCR	1 cut(s)	175
EagI	CGGCCG	1 cut(s)	175
Eam1104I	CTCTTC	2 cut(s)	528, 637
Eam1105I	GACNNNNNGTC	1 cut(s)	599
EarI	CTCTTC	2 cut(s)	528, 637
EciI	GGCGGA	1 cut(s)	267
EclXI	CGGCCG	1 cut(s)	175
Eco47I	GGWCC	2 cut(s)	373, 1166
Eco52I	CGGCCG	1 cut(s)	175
Eco91I	GGTNACC	1 cut(s)	447
EcoO65I	GGTNACC	1 cut(s)	447
EcoRII	CCWGG	1 cut(s)	901
EgeI	GGCGCC	1 cut(s)	946
EheI	GGCGCC	1 cut(s)	946
FaeI	CATG	6 cut(s)	20, 106, 830, 1100, 1138, 1178
FalI	AAGNNNNNCTT	4 cut(s)	582, 614, 707, 739
FaqI	GGGAC	3 cut(s)	208, 487, 1027
FatI	CATG	6 cut(s)	16, 102, 826, 1096, 1134, 1174
FauI	CCCGC	1 cut(s)	76
FbaI	TGATCA	1 cut(s)	3
Fnu4HI	GCNGC	6 cut(s)	388, 526, 816, 943, 960, 1031
FokI	GGATG	4 cut(s)	22, 107, 260, 1097
Fsp4HI	GCNGC	6 cut(s)	388, 526, 816, 943, 960, 1031
FspBI	CTAG	2 cut(s)	72, 1143
FspI	TGCGCA	1 cut(s)	963
GlaI	GCGC	2 cut(s)	946, 963
GluI	GCNGC	6 cut(s)	388, 526, 816, 943, 960, 1031
GsaI	CCCAGC	1 cut(s)	738
GsuI	CTGGAG	1 cut(s)	66
HaeII	RGCGCY	1 cut(s)	948
HaeIII	GGCC	4 cut(s)	177, 748, 863, 919
HapII	CCGG	4 cut(s)	178, 542, 749, 911
HhaI	GCGC	2 cut(s)	947, 964
Hin1I	GRCGYC	1 cut(s)	945
Hin1II	CATG	6 cut(s)	20, 106, 830, 1100, 1138, 1178
Hin6I	GCGC	2 cut(s)	945, 962
HinP1I	GCGC	2 cut(s)	945, 962
HincII	GTYRAC	1 cut(s)	100
HindII	GTYRAC	1 cut(s)	100
HindIII	AAGCTT	1 cut(s)	776
HinfI	GANTC	5 cut(s)	196, 302, 431, 637, 1093
HpaII	CCGG	4 cut(s)	178, 542, 749, 911
HphI	GGTGA	1 cut(s)	632
Hpy166II	GTNNAC	2 cut(s)	100, 373
Hpy188I	TCNGA	2 cut(s)	586, 1063
Hpy188III	TCNNGA	3 cut(s)	499, 514, 1143
Hpy8I	GTNNAC	2 cut(s)	100, 373
HpyAV	CCTTC	3 cut(s)	496, 591, 871
HpyCH4III	ACNGT	5 cut(s)	353, 370, 440, 478, 954
HpyCH4IV	ACGT	2 cut(s)	658, 842
HpyCH4V	TGCA	5 cut(s)	271, 364, 771, 818, 1033
HpyF10VI	GCNNNNNNNGC	6 cut(s)	183, 393, 869, 878, 925, 970
HpyF3I	CTNAG	3 cut(s)	140, 167, 379
HpySE526I	ACGT	2 cut(s)	658, 842
Hsp92I	GRCGYC	1 cut(s)	945
Hsp92II	CATG	6 cut(s)	20, 106, 830, 1100, 1138, 1178
HspAI	GCGC	2 cut(s)	945, 962
KasI	GGCGCC	1 cut(s)	944
KroI	GCCGGC	1 cut(s)	748
KroNI	GCCGGC	1 cut(s)	750
Ksp22I	TGATCA	1 cut(s)	3
Kzo9I	GATC	3 cut(s)	3, 627, 849
Lsp1109I	GCAGC	4 cut(s)	374, 802, 946, 1017
MaeI	CTAG	2 cut(s)	72, 1143
MaeII	ACGT	2 cut(s)	658, 842
MaeIII	GTNAC	7 cut(s)	303, 447, 460, 559, 638, 1003, 1087
MalI	GATC	3 cut(s)	5, 629, 851
MboI	GATC	3 cut(s)	3, 627, 849
MboII	GAAGA	4 cut(s)	103, 479, 545, 624
MhlI	GDGCHC	2 cut(s)	551, 909
MluCI	AATT	3 cut(s)	63, 273, 645
Mly113I	GGCGCC	1 cut(s)	945
MlyI	GAGTC	4 cut(s)	190, 311, 646, 1102
MroNI	GCCGGC	1 cut(s)	748
MseI	TTAA	5 cut(s)	203, 330, 486, 761, 888
MspI	CCGG	4 cut(s)	178, 542, 749, 911
MspR9I	CCNGG	2 cut(s)	903, 911
Mva1269I	GAATGC	1 cut(s)	527
MvaI	CCWGG	1 cut(s)	903
MwoI	GCNNNNNNNGC	6 cut(s)	183, 393, 869, 878, 925, 970
NaeI	GCCGGC	1 cut(s)	750
NarI	GGCGCC	1 cut(s)	945
NciI	CCSGG	1 cut(s)	911
NdeII	GATC	3 cut(s)	3, 627, 849
NgoMIV	GCCGGC	1 cut(s)	748
NlaIII	CATG	6 cut(s)	20, 106, 830, 1100, 1138, 1178
NlaIV	GGNNCC	2 cut(s)	908, 946
NmeAIII	GCCGAG	1 cut(s)	808
NmuCI	GTSAC	5 cut(s)	303, 559, 638, 1003, 1087
NsbI	TGCGCA	1 cut(s)	963
NspI	RCATGY	2 cut(s)	106, 1178
PciI	ACATGT	2 cut(s)	102, 1174
PctI	GAATGC	1 cut(s)	527
PdiI	GCCGGC	1 cut(s)	750
PfeI	GAWTC	1 cut(s)	431
PflMI	CCANNNNNTGG	1 cut(s)	89
PkrI	GCNGC	6 cut(s)	389, 527, 817, 944, 961, 1032
PleI	GAGTC	4 cut(s)	190, 310, 645, 1101
PluTI	GGCGCC	1 cut(s)	948
PpsI	GAGTC	4 cut(s)	190, 310, 645, 1101
Ppu21I	YACGTR	1 cut(s)	843
PscI	ACATGT	2 cut(s)	102, 1174
Psp1406I	AACGTT	1 cut(s)	658
Psp6I	CCWGG	1 cut(s)	901
PspEI	GGTNACC	1 cut(s)	447
PspFI	CCCAGC	1 cut(s)	734
PspGI	CCWGG	1 cut(s)	901
PspN4I	GGNNCC	2 cut(s)	908, 946
PspPI	GGNCC	3 cut(s)	373, 746, 1166
RsaI	GTAC	1 cut(s)	841
RsaNI	GTAC	1 cut(s)	840
SaqAI	TTAA	5 cut(s)	203, 330, 486, 761, 888
SatI	GCNGC	6 cut(s)	388, 526, 816, 943, 960, 1031
Sau3AI	GATC	3 cut(s)	3, 627, 849
Sau96I	GGNCC	3 cut(s)	373, 746, 1166
SchI	GAGTC	4 cut(s)	190, 311, 646, 1102
ScrFI	CCNGG	2 cut(s)	903, 911
SduI	GDGCHC	2 cut(s)	551, 909
SfoI	GGCGCC	1 cut(s)	946
SinI	GGWCC	2 cut(s)	373, 1166
Sse9I	AATT	3 cut(s)	63, 273, 645
SsiI	CCGC	5 cut(s)	69, 252, 526, 942, 973
SspDI	GGCGCC	1 cut(s)	944
SspMI	CTAG	2 cut(s)	72, 1143
StyD4I	CCNGG	2 cut(s)	901, 909
TaaI	ACNGT	5 cut(s)	353, 370, 440, 478, 954
TaiI	ACGT	2 cut(s)	661, 845
TaqI	TCGA	2 cut(s)	498, 635
TasI	AATT	3 cut(s)	63, 273, 645
TauI	GCSGC	2 cut(s)	528, 945
TfiI	GAWTC	1 cut(s)	431
Tru1I	TTAA	5 cut(s)	203, 330, 486, 761, 888
Tru9I	TTAA	5 cut(s)	203, 330, 486, 761, 888
TscAI	CASTG	4 cut(s)	13, 46, 688, 1168
TseFI	GTSAC	5 cut(s)	303, 559, 638, 1003, 1087
TseI	GCWGC	4 cut(s)	387, 815, 959, 1030
Tsp45I	GTSAC	5 cut(s)	303, 559, 638, 1003, 1087
TspDTI	ATGAA	6 cut(s)	97, 222, 815, 1047, 1140, 1151
TspRI	CASTG	4 cut(s)	13, 46, 688, 1168
Van91I	CCANNNNNTGG	1 cut(s)	89
VpaK11BI	GGWCC	2 cut(s)	373, 1166
XapI	RAATTY	1 cut(s)	273
XbaI	TCTAGA	1 cut(s)	1142
XceI	RCATGY	2 cut(s)	106, 1178
XcmI	CCANNNNNNNNNTGG	1 cut(s)	341
XspI	CTAG	2 cut(s)	72, 1143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.