Rw1G038920

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000139
Physical Location & Seq
Forward (+)
66466271 .. 66467503
1233 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G038920.1

Sequence Viewer

Length: 1233 bp
ATGTTGAAGAACAAGGAGCAGCAGGAACTCCAACATGTCCCTGAACATGTTGTGCTCAACATTCTCTGCCGCTTGCCGGTCAGGTCCTTGATCCGCTTCACTTGTGTCTCAAAACGCTGGCGCTCTCTTATCATTTCCGACCACCAATTTGGCAACTCCCATTTCCAACTAGCAGCATCCCACCTCCGTCAAAATGTCTTAATCGTTAACGTTTCAAAAGGTACACTCGGAACTATGGTACCCTTTGGATTCCAATCCGTGCAAGATAAATTTTCGATCAAAAATCTCACCTCCCCATTCCAGCGGTGTAGCCAAATTCCAGTAATGGGCTCTTGCAATGGTTTGGTAGTTTTAGCCAATTTCCATCCCTATGTTAGGGTGTCTCGATTCCAACCATGTTCTGATGATTACAATAGTCTGGTGATGTGGAACCCATCAACTGGATTCTTCCGCAACATACCTTGTCCAAATTTTCAGATTGGGATGATAAAATTAACAGAGGAAGAGAATGGGATCGGTGTATATTATGGTTTTGGTCAAGTGTCGGCCTCTGACGACTACAAACTTGTGGTCATACCAAATTTGGGTGCTTTTATGGAGGTGCAAGTGTTCTCAGTCAGAGCCAACTGTTGGAAAGTTGTTAAGGCTCCTTACTTGTCGCCATACCGCCCCTGGTCTGAAGAATTGGGGACTTATTCAAATGGAGCCATTCATTGGGTCAGTAACCGTGAGCCTGGGATTTTCGAGCCACCTGTGTATGCTTTTGATCTGGCAAATGAGGAGTTTCGGGAAATGCCATTGCCTGTTCTTAGCCGTAATGAAGATGGCGTGGAAATGACGCAAATTAGAACTCAGGTTCTTTTGGGAGGATGTCTTTGTGTGATGTTTCAGGATGTGATGCCTCAGGACGCTAACAAGTATACTGAATTTTGGGTGATGAAAGAGTATGGGCGGCCTGAATCTTGGGTTAAACTCTTTGGGTTTAACCTACATGATTTACCAGACGTGTTCGATTCATTCTGTAGCCGCCTTTTTTGGAATCCTATTTTCATTGCAGAAGACGGTACAGTCGTGATCAAACTGCGTACCCAGAAGGAGTTGATCTGGATTAAATGCCGTAAAGAAGAGAAGCCGTTCTGCACCGACCGGTACCGTCTTGAGGAGGTGGCGGAACAGCATTATGCATTTGATGCCATTTTGTATGATGAAACTCTAGTTTCGATACCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

410

Amino Acids

47.32

Weight (kDa)

6.04

Isoelectric Point (pI)

46.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 11 - 47 3.3e-09 F-box domain
F-box-like PF12937 11 - 47 7e-07 F-box-like
FBA_3 PF08268 106 - 324 7.8e-11 F-box associated beta propeller domain
FBA_1 PF07734 135 - 408 4.7e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1067
Acc65I GGTACC 2 cut(s) 238, 1149
AccB1I GGYRCC 2 cut(s) 238, 1149
AccB7I CCANNNNNTGG 3 cut(s) 440, 630, 714
AccI GTMKAC 1 cut(s) 920
AciI CCGC 8 cut(s) 70, 94, 304, 451, 667, 952, 1027, 1169
AclI AACGTT 1 cut(s) 210
AclWI GGATC 2 cut(s) 85, 521
AcsI RAATTY 5 cut(s) 269, 315, 469, 580, 926
AcuI CTGAAG 1 cut(s) 699
AfaI GTAC 5 cut(s) 223, 240, 1066, 1087, 1151
AfiI CCNNNNNNNGG 8 cut(s) 76, 326, 375, 440, 584, 630, 714, 1159
AflIII ACRYGT 3 cut(s) 34, 46, 1005
AgeI ACCGGT 1 cut(s) 1146
AgsI TTSAA 3 cut(s) 7, 216, 699
AjiI CACGTC 1 cut(s) 1006
AjnI CCWGG 2 cut(s) 671, 733
Alw21I GWGCWC 1 cut(s) 57
Alw26I GTCTC 2 cut(s) 112, 387
AlwI GGATC 2 cut(s) 85, 521
AoxI GGCC 2 cut(s) 546, 953
ApeKI GCWGC 2 cut(s) 19, 173
ApoI RAATTY 5 cut(s) 269, 315, 469, 580, 926
ArsI GACNNNNNNTTYG 4 cut(s) 131, 163, 555, 587
AsiGI ACCGGT 1 cut(s) 1146
Asp700I GAANNNNTTC 1 cut(s) 1133
Asp718I GGTACC 2 cut(s) 238, 1149
AspLEI GCGC 1 cut(s) 123
AspS9I GGNCC 1 cut(s) 84
AsuHPI GGTGA 3 cut(s) 280, 433, 946
AvaII GGWCC 1 cut(s) 84
AxyI CCTNAGG 1 cut(s) 903
BaeI ACNNNNGTAYC 4 cut(s) 222, 255, 1056, 1089
BanI GGYRCC 2 cut(s) 238, 1149
BanII GRGCYC 1 cut(s) 332
BbsI GAAGAC 1 cut(s) 1065
Bbv12I GWGCWC 1 cut(s) 57
BbvI GCAGC 2 cut(s) 31, 185
BccI CCATC 3 cut(s) 372, 442, 818
BceAI ACGGC 3 cut(s) 798, 1101, 1117
BciT130I CCWGG 2 cut(s) 673, 735
BclI TGATCA 1 cut(s) 1074
BcoDI GTCTC 2 cut(s) 112, 387
BfaI CTAG 2 cut(s) 170, 1214
BfmI CTRYAG 1 cut(s) 1021
BfoI RGCGCY 1 cut(s) 124
BisI GCNGC 5 cut(s) 20, 70, 174, 953, 1027
BlsI GCNGC 5 cut(s) 21, 71, 175, 954, 1028
Bme1390I CCNGG 2 cut(s) 673, 735
Bme18I GGWCC 1 cut(s) 84
BmgBI CACGTC 1 cut(s) 1006
BmgT120I GGNCC 1 cut(s) 84
BmiI GGNNCC 5 cut(s) 240, 431, 648, 706, 1151
BmrFI CCNGG 2 cut(s) 673, 735
BmsI GCATC 3 cut(s) 185, 888, 1180
BpiI GAAGAC 1 cut(s) 1065
BpuEI CTTGAG 1 cut(s) 1178
BsaBI GATNNNNATC 1 cut(s) 253
BsaJI CCNNGG 2 cut(s) 671, 734
BsaWI WCCGGW 1 cut(s) 1146
Bsc4I CCNNNNNNNGG 8 cut(s) 76, 326, 375, 440, 584, 630, 714, 1159
Bse118I RCCGGY 2 cut(s) 76, 1146
Bse1I ACTGG 2 cut(s) 320, 445
Bse21I CCTNAGG 1 cut(s) 903
Bse3DI GCAATG 3 cut(s) 343, 797, 1050
Bse8I GATNNNNATC 1 cut(s) 253
BseBI CCWGG 2 cut(s) 673, 735
BseDI CCNNGG 2 cut(s) 671, 734
BseGI GGATG 5 cut(s) 176, 364, 489, 875, 898
BseJI GATNNNNATC 1 cut(s) 253
BseLI CCNNNNNNNGG 8 cut(s) 76, 326, 375, 440, 584, 630, 714, 1159
BseMI GCAATG 3 cut(s) 343, 797, 1050
BseMII CTCAG 3 cut(s) 627, 866, 917
BseNI ACTGG 2 cut(s) 320, 445
BseRI GAGGAG 2 cut(s) 794, 1175
BseXI GCAGC 2 cut(s) 31, 185
BsgI GTGCAG 1 cut(s) 1123
Bsh1285I CGRYCG 1 cut(s) 1147
BshFI GGCC 2 cut(s) 548, 955
BshNI GGYRCC 2 cut(s) 238, 1149
BshTI ACCGGT 1 cut(s) 1146
BsiEI CGRYCG 1 cut(s) 1147
BsiHKAI GWGCWC 1 cut(s) 57
BsiSI CCGG 2 cut(s) 77, 1147
BslFI GGGAC 2 cut(s) 23, 703
BslI CCNNNNNNNGG 8 cut(s) 76, 326, 375, 440, 584, 630, 714, 1159
BsmAI GTCTC 2 cut(s) 112, 387
BsmFI GGGAC 2 cut(s) 23, 703
BsnI GGCC 2 cut(s) 548, 955
Bsp1286I GDGCHC 2 cut(s) 57, 332
Bsp143I GATC 6 cut(s) 90, 276, 513, 766, 1074, 1101
BspACI CCGC 8 cut(s) 70, 94, 304, 451, 667, 952, 1027, 1169
BspANI GGCC 2 cut(s) 548, 955
BspCNI CTCAG 3 cut(s) 626, 865, 916
BspLI GGNNCC 5 cut(s) 240, 431, 648, 706, 1151
BspPI GGATC 2 cut(s) 85, 521
BspT107I GGYRCC 2 cut(s) 238, 1149
BsrDI GCAATG 3 cut(s) 343, 797, 1050
BsrFI RCCGGY 2 cut(s) 76, 1146
BsrI ACTGG 2 cut(s) 320, 445
BssAI RCCGGY 2 cut(s) 76, 1146
BssECI CCNNGG 2 cut(s) 671, 734
BssMI GATC 6 cut(s) 90, 276, 513, 766, 1074, 1101
BssNAI GTATAC 1 cut(s) 921
Bst1107I GTATAC 1 cut(s) 921
Bst2UI CCWGG 2 cut(s) 673, 735
Bst4CI ACNGT 5 cut(s) 629, 728, 1064, 1069, 1154
Bst6I CTCTTC 2 cut(s) 498, 1119
BstAPI GCANNNNNTGC 1 cut(s) 1190
BstC8I GCNNGC 2 cut(s) 74, 119
BstDEI CTNAG 4 cut(s) 613, 809, 852, 903
BstENI CCTNNNNNAGG 1 cut(s) 373
BstF5I GGATG 5 cut(s) 176, 364, 489, 875, 898
BstH2I RGCGCY 1 cut(s) 124
BstHHI GCGC 1 cut(s) 123
BstKTI GATC 6 cut(s) 93, 279, 516, 769, 1077, 1104
BstMAI GTCTC 2 cut(s) 112, 387
BstMBI GATC 6 cut(s) 90, 276, 513, 766, 1074, 1101
BstMCI CGRYCG 1 cut(s) 1147
BstMWI GCNNNNNNNGC 1 cut(s) 1190
BstNI CCWGG 2 cut(s) 673, 735
BstNSI RCATGY 2 cut(s) 38, 50
BstSCI CCNGG 2 cut(s) 671, 733
BstSFI CTRYAG 1 cut(s) 1021
BstV1I GCAGC 2 cut(s) 31, 185
BstV2I GAAGAC 1 cut(s) 1065
BstXI CCANNNNNNTGG 1 cut(s) 149
BstZ17I GTATAC 1 cut(s) 921
Bsu36I CCTNAGG 1 cut(s) 903
BsuRI GGCC 2 cut(s) 548, 955
BtrI CACGTC 1 cut(s) 1006
BtsCI GGATG 5 cut(s) 176, 364, 489, 875, 898
Cac8I GCNNGC 2 cut(s) 74, 119
CfoI GCGC 1 cut(s) 123
Cfr10I RCCGGY 2 cut(s) 76, 1146
Cfr13I GGNCC 1 cut(s) 84
CseI GACGC 2 cut(s) 847, 917
Csp6I GTAC 5 cut(s) 222, 239, 1065, 1086, 1150
CspAI ACCGGT 1 cut(s) 1146
CviAII CATG 4 cut(s) 35, 47, 396, 992
CviQI GTAC 5 cut(s) 222, 239, 1065, 1086, 1150
DdeI CTNAG 4 cut(s) 613, 809, 852, 903
DpnI GATC 6 cut(s) 92, 278, 515, 768, 1076, 1103
DpnII GATC 6 cut(s) 90, 276, 513, 766, 1074, 1101
DrdI GACNNNNNNGTC 1 cut(s) 1067
DseDI GACNNNNNNGTC 1 cut(s) 1067
Eam1104I CTCTTC 2 cut(s) 498, 1119
EarI CTCTTC 2 cut(s) 498, 1119
EciI GGCGGA 1 cut(s) 1184
Eco24I GRGCYC 1 cut(s) 332
Eco47I GGWCC 1 cut(s) 84
Eco57I CTGAAG 1 cut(s) 699
Eco81I CCTNAGG 1 cut(s) 903
EcoNI CCTNNNNNAGG 1 cut(s) 373
EcoO109I RGGNCCY 1 cut(s) 84
EcoRII CCWGG 2 cut(s) 671, 733
EcoT22I ATGCAT 1 cut(s) 1186
EcoT38I GRGCYC 1 cut(s) 332
FaeI CATG 4 cut(s) 38, 50, 399, 995
FaqI GGGAC 2 cut(s) 23, 703
FatI CATG 4 cut(s) 34, 46, 395, 991
FbaI TGATCA 1 cut(s) 1074
FblI GTMKAC 1 cut(s) 920
Fnu4HI GCNGC 5 cut(s) 20, 70, 174, 953, 1027
FokI GGATG 5 cut(s) 163, 351, 496, 882, 905
FriOI GRGCYC 1 cut(s) 332
Fsp4HI GCNGC 5 cut(s) 20, 70, 174, 953, 1027
FspBI CTAG 2 cut(s) 170, 1214
GlaI GCGC 1 cut(s) 122
GluI GCNGC 5 cut(s) 20, 70, 174, 953, 1027
HaeII RGCGCY 1 cut(s) 124
HaeIII GGCC 2 cut(s) 548, 955
HapII CCGG 2 cut(s) 77, 1147
HgaI GACGC 2 cut(s) 847, 917
HhaI GCGC 1 cut(s) 123
Hin1II CATG 4 cut(s) 38, 50, 399, 995
Hin6I GCGC 1 cut(s) 121
HinP1I GCGC 1 cut(s) 121
HincII GTYRAC 1 cut(s) 208
HindII GTYRAC 1 cut(s) 208
HinfI GANTC 6 cut(s) 249, 387, 444, 959, 1013, 1039
HpaI GTTAAC 1 cut(s) 208
HpaII CCGG 2 cut(s) 77, 1147
HphI GGTGA 3 cut(s) 280, 433, 946
Hpy166II GTNNAC 3 cut(s) 208, 224, 921
Hpy188I TCNGA 7 cut(s) 139, 230, 403, 477, 553, 620, 679
Hpy188III TCNNGA 7 cut(s) 384, 788, 890, 905, 1072, 1105, 1157
Hpy8I GTNNAC 3 cut(s) 208, 224, 921
HpyAV CCTTC 1 cut(s) 1087
HpyCH4III ACNGT 5 cut(s) 629, 728, 1064, 1069, 1154
HpyCH4IV ACGT 2 cut(s) 210, 1005
HpyCH4V TGCA 6 cut(s) 262, 336, 604, 1055, 1140, 1184
HpyF10VI GCNNNNNNNGC 1 cut(s) 1190
HpyF3I CTNAG 4 cut(s) 613, 809, 852, 903
HpySE526I ACGT 2 cut(s) 210, 1005
Hsp92II CATG 4 cut(s) 38, 50, 399, 995
HspAI GCGC 1 cut(s) 121
KpnI GGTACC 2 cut(s) 242, 1153
Ksp22I TGATCA 1 cut(s) 1074
KspAI GTTAAC 1 cut(s) 208
Kzo9I GATC 6 cut(s) 90, 276, 513, 766, 1074, 1101
LmnI GCTCC 3 cut(s) 16, 652, 704
Lsp1109I GCAGC 2 cut(s) 31, 185
LweI GCATC 3 cut(s) 185, 888, 1180
MaeI CTAG 2 cut(s) 170, 1214
MaeII ACGT 2 cut(s) 210, 1005
MaeIII GTNAC 1 cut(s) 722
MalI GATC 6 cut(s) 92, 278, 515, 768, 1076, 1103
MboI GATC 6 cut(s) 90, 276, 513, 766, 1074, 1101
MboII GAAGA 7 cut(s) 19, 439, 515, 692, 833, 1070, 1136
MhlI GDGCHC 2 cut(s) 57, 332
MmeI TCCRAC 5 cut(s) 55, 162, 190, 415, 611
Mph1103I ATGCAT 1 cut(s) 1186
MroXI GAANNNNTTC 1 cut(s) 1133
MseI TTAA 7 cut(s) 200, 207, 494, 642, 969, 984, 1110
MslI CAYNNNNRTG 1 cut(s) 369
MspA1I CMGCKG 1 cut(s) 304
MspI CCGG 2 cut(s) 77, 1147
MspR9I CCNGG 2 cut(s) 673, 735
MvaI CCWGG 2 cut(s) 673, 735
MwoI GCNNNNNNNGC 1 cut(s) 1190
NdeII GATC 6 cut(s) 90, 276, 513, 766, 1074, 1101
NlaIII CATG 4 cut(s) 38, 50, 399, 995
NlaIV GGNNCC 5 cut(s) 240, 431, 648, 706, 1151
NsiI ATGCAT 1 cut(s) 1186
NspI RCATGY 2 cut(s) 38, 50
PciI ACATGT 2 cut(s) 34, 46
PcsI WCGNNNNNNNCGW 1 cut(s) 1068
PdmI GAANNNNTTC 1 cut(s) 1133
PfeI GAWTC 6 cut(s) 249, 387, 444, 959, 1013, 1039
PflMI CCANNNNNTGG 3 cut(s) 440, 630, 714
PinAI ACCGGT 1 cut(s) 1146
PkrI GCNGC 5 cut(s) 21, 71, 175, 954, 1028
PpuMI RGGWCCY 1 cut(s) 84
PscI ACATGT 2 cut(s) 34, 46
Psp1406I AACGTT 1 cut(s) 210
Psp5II RGGWCCY 1 cut(s) 84
Psp6I CCWGG 2 cut(s) 671, 733
PspGI CCWGG 2 cut(s) 671, 733
PspN4I GGNNCC 5 cut(s) 240, 431, 648, 706, 1151
PspPI GGNCC 1 cut(s) 84
PspPPI RGGWCCY 1 cut(s) 84
RsaI GTAC 5 cut(s) 223, 240, 1066, 1087, 1151
RsaNI GTAC 5 cut(s) 222, 239, 1065, 1086, 1150
RseI CAYNNNNRTG 1 cut(s) 369
SaqAI TTAA 7 cut(s) 200, 207, 494, 642, 969, 984, 1110
SatI GCNGC 5 cut(s) 20, 70, 174, 953, 1027
Sau3AI GATC 6 cut(s) 90, 276, 513, 766, 1074, 1101
Sau96I GGNCC 1 cut(s) 84
ScrFI CCNGG 2 cut(s) 673, 735
SduI GDGCHC 2 cut(s) 57, 332
SfaNI GCATC 3 cut(s) 185, 888, 1180
SfcI CTRYAG 1 cut(s) 1021
SinI GGWCC 1 cut(s) 84
SmiMI CAYNNNNRTG 1 cut(s) 369
SmlI CTYRAG 1 cut(s) 1157
SmoI CTYRAG 1 cut(s) 1157
SsiI CCGC 8 cut(s) 70, 94, 304, 451, 667, 952, 1027, 1169
SspMI CTAG 2 cut(s) 170, 1214
StyD4I CCNGG 2 cut(s) 671, 733
TaaI ACNGT 5 cut(s) 629, 728, 1064, 1069, 1154
TaiI ACGT 2 cut(s) 213, 1008
TaqI TCGA 5 cut(s) 275, 385, 744, 1011, 1220
TauI GCSGC 3 cut(s) 72, 955, 1029
TfiI GAWTC 6 cut(s) 249, 387, 444, 959, 1013, 1039
Tru1I TTAA 7 cut(s) 200, 207, 494, 642, 969, 984, 1110
Tru9I TTAA 7 cut(s) 200, 207, 494, 642, 969, 984, 1110
TseI GCWGC 2 cut(s) 19, 173
TspDTI ATGAA 6 cut(s) 701, 834, 953, 1005, 1039, 1221
TspGWI ACGGA 2 cut(s) 176, 247
Van91I CCANNNNNTGG 3 cut(s) 440, 630, 714
VpaK11BI GGWCC 1 cut(s) 84
XagI CCTNNNNNAGG 1 cut(s) 373
XapI RAATTY 5 cut(s) 269, 315, 469, 580, 926
XceI RCATGY 2 cut(s) 38, 50
XcmI CCANNNNNNNNNTGG 1 cut(s) 669
XmiI GTMKAC 1 cut(s) 920
XmnI GAANNNNTTC 1 cut(s) 1133
XspI CTAG 2 cut(s) 170, 1214
Zsp2I ATGCAT 1 cut(s) 1186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.