Rmu_sc0012777.1_g000003

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012777.1
OG0000139
Physical Location & Seq
Forward (+)
8201 .. 9361
1161 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012777.1_g000003.1.cds

Sequence Viewer

Length: 1161 bp
atgtcgaaggaggaggaggagggcttcgatgtcccagaagatattgtactgaaaattctgtgccggttgccggtcaaaacactgatctggttcacatgtgtgtcaaaacagtggcgttttatcatcatttccgatcctcaattcgccaaatcccacctccaactagcattacagcaggcaaccctcagccaaagaatcttcgtttccttcgaccccaaatatttttgggagtccccacaatttcaatcatgggaagagaatttcaagggttcattcagacgcctcaccttcccatcagaggaacgtaaccagctagtaaggacctcgtgcaatggtttggtacttctaggtgactcctatttaactggtttggtagccttgtctatctggaatccatcaaccggatttttccgcaaaatacctagtccaaggatgactgaatgcaccgacgagaagggaggaaaaaaggacctagactttgtaatttctggttttggttatgtgtcgtccacagatgactacaagcttgtttttgtaatcccgggcgatagcacacattttcatgtctacatcttttcactgagggccaactcttggaaagttattgaagctcctcacttgtcttcaccagactgcattcacgaggtggggactctttcaaatgaagcaatccattggattaactacggccgtggagtttcagacccagcgagtgtgtatgcttttgatttggcagaagaggagttccgtgaaatgacattgcctgtttggtacccagataatgacagagacataagggttgttttagggggatgcctttgtgtgtggtttaagacagatggtgggcttggttgcgaaatttggggaatgacagagtatgcggtgcctgaatcttgggttaaactctttggatttagagatgacgatctaccagatgtgttcacttcattacactgtggttggcatctgtgttctgttacagaaggcggtacagttgtgattcaactatttggcagcaaggagttggtcaggattgaatgccgtaaagaagagaagccagtctgcagcggtcgatataatttgcctgaagagttgcgcaggtgtaggcattattttcacacaacttcatatggtgaaactttagtttctgtacccgaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

386

Amino Acids

44.26

Weight (kDa)

5.26

Isoelectric Point (pI)

51.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1089
Acc16I TGCGCA 1 cut(s) 1097
Acc36I ACCTGC 1 cut(s) 1089
Acc65I GGTACC 1 cut(s) 771
AccB1I GGYRCC 2 cut(s) 771, 883
AccB7I CCANNNNNTGG 1 cut(s) 594
AccI GTMKAC 1 cut(s) 567
AciI CCGC 4 cut(s) 412, 881, 987, 1068
AclWI GGATC 1 cut(s) 128
AcoI YGGCCR 1 cut(s) 688
AcsI RAATTY 3 cut(s) 54, 259, 858
AcuI CTGAAG 1 cut(s) 1107
AcyI GRCGYC 1 cut(s) 280
AdeI CACNNNGTG 1 cut(s) 646
AfaI GTAC 5 cut(s) 48, 342, 773, 991, 1152
AfiI CCNNNNNNNGG 4 cut(s) 70, 298, 401, 594
AflIII ACRYGT 1 cut(s) 95
AgsI TTSAA 6 cut(s) 245, 265, 608, 660, 1004, 1037
AleI CACNNNNGTG 1 cut(s) 98
AluBI AGCT 3 cut(s) 313, 526, 611
AluI AGCT 3 cut(s) 313, 526, 611
Alw26I GTCTC 1 cut(s) 783
AlwI GGATC 1 cut(s) 128
Ama87I CYCGRG 1 cut(s) 541
AoxI GGCC 2 cut(s) 585, 688
ApeKI GCWGC 2 cut(s) 1014, 1065
ApoI RAATTY 3 cut(s) 54, 259, 858
ArsI GACNNNNNNTTYG 2 cut(s) 461, 493
Asp718I GGTACC 1 cut(s) 771
AspLEI GCGC 1 cut(s) 1098
AspS9I GGNCC 3 cut(s) 321, 469, 585
AsuC2I CCSGG 2 cut(s) 542, 543
AsuHPI GGTGA 4 cut(s) 277, 362, 618, 1145
AvaI CYCGRG 1 cut(s) 541
AvaII GGWCC 2 cut(s) 321, 469
BaeI ACNNNNGTAYC 2 cut(s) 981, 1014
BanI GGYRCC 2 cut(s) 771, 883
BarI GAAGNNNNNNTAC 2 cut(s) 30, 62
BauI CACGAG 2 cut(s) 325, 641
BbsI GAAGAC 1 cut(s) 615
BbvCI CCTCAGC 1 cut(s) 185
BbvI GCAGC 2 cut(s) 1026, 1077
BccI CCATC 3 cut(s) 301, 403, 833
BceAI ACGGC 3 cut(s) 675, 703, 1026
BcnI CCSGG 2 cut(s) 542, 543
BcoDI GTCTC 1 cut(s) 783
BfaI CTAG 5 cut(s) 164, 314, 347, 423, 473
BfmI CTRYAG 1 cut(s) 1063
BfuAI ACCTGC 1 cut(s) 1089
BisI GCNGC 2 cut(s) 1015, 1066
BlsI GCNGC 2 cut(s) 1016, 1067
Bme1390I CCNGG 2 cut(s) 542, 543
Bme18I GGWCC 2 cut(s) 321, 469
BmeT110I CYCGRG 1 cut(s) 541
BmgT120I GGNCC 3 cut(s) 321, 469, 585
BmiI GGNNCC 2 cut(s) 773, 885
BmrFI CCNGG 2 cut(s) 542, 543
BmsI GCATC 2 cut(s) 803, 973
BpiI GAAGAC 1 cut(s) 615
Bpu10I CCTNAGC 1 cut(s) 185
BpuMI CCSGG 2 cut(s) 542, 543
BsaBI GATNNNNATC 1 cut(s) 924
BsaHI GRCGYC 1 cut(s) 280
BsaJI CCNNGG 3 cut(s) 428, 541, 691
BsaWI WCCGGW 1 cut(s) 401
Bsc4I CCNNNNNNNGG 4 cut(s) 70, 298, 401, 594
Bse118I RCCGGY 2 cut(s) 63, 70
Bse1I ACTGG 2 cut(s) 370, 1058
Bse3DI GCAATG 2 cut(s) 337, 758
Bse8I GATNNNNATC 1 cut(s) 924
BseDI CCNNGG 3 cut(s) 428, 541, 691
BseGI GGATG 2 cut(s) 438, 818
BseJI GATNNNNATC 1 cut(s) 924
BseLI CCNNNNNNNGG 4 cut(s) 70, 298, 401, 594
BseMI GCAATG 2 cut(s) 337, 758
BseMII CTCAG 2 cut(s) 199, 572
BseNI ACTGG 2 cut(s) 370, 1058
BseRI GAGGAG 5 cut(s) 26, 29, 32, 603, 755
BseX3I CGGCCG 1 cut(s) 688
BseXI GCAGC 2 cut(s) 1026, 1077
BseYI CCCAGC 1 cut(s) 706
Bsh1285I CGRYCG 2 cut(s) 691, 1072
BshFI GGCC 2 cut(s) 587, 690
BshNI GGYRCC 2 cut(s) 771, 883
BsiEI CGRYCG 2 cut(s) 691, 1072
BsiHKCI CYCGRG 1 cut(s) 541
BsiSI CCGG 4 cut(s) 64, 71, 402, 542
BslFI GGGAC 3 cut(s) 17, 217, 664
BslI CCNNNNNNNGG 4 cut(s) 70, 298, 401, 594
BsmAI GTCTC 1 cut(s) 783
BsmFI GGGAC 3 cut(s) 17, 217, 664
BsmI GAATGC 3 cut(s) 446, 636, 1043
BsnI GGCC 2 cut(s) 587, 690
BsoBI CYCGRG 1 cut(s) 541
Bsp143I GATC 3 cut(s) 84, 133, 925
BspACI CCGC 4 cut(s) 412, 881, 987, 1068
BspANI GGCC 2 cut(s) 587, 690
BspCNI CTCAG 2 cut(s) 198, 573
BspLI GGNNCC 2 cut(s) 773, 885
BspMAI CTGCAG 1 cut(s) 1067
BspMI ACCTGC 1 cut(s) 1089
BspPI GGATC 1 cut(s) 128
BspT107I GGYRCC 2 cut(s) 771, 883
BsrDI GCAATG 2 cut(s) 337, 758
BsrFI RCCGGY 2 cut(s) 63, 70
BsrI ACTGG 2 cut(s) 370, 1058
BssAI RCCGGY 2 cut(s) 63, 70
BssECI CCNNGG 3 cut(s) 428, 541, 691
BssMI GATC 3 cut(s) 84, 133, 925
BssNI GRCGYC 1 cut(s) 280
BssSI CACGAG 2 cut(s) 325, 641
BssT1I CCWWGG 1 cut(s) 428
Bst2BI CACGAG 2 cut(s) 325, 641
Bst4CI ACNGT 3 cut(s) 111, 956, 994
Bst6I CTCTTC 4 cut(s) 249, 732, 1044, 1083
BstACI GRCGYC 1 cut(s) 280
BstC8I GCNNGC 1 cut(s) 177
BstDEI CTNAG 2 cut(s) 185, 581
BstDSI CCRYGG 1 cut(s) 691
BstF5I GGATG 2 cut(s) 438, 818
BstHHI GCGC 1 cut(s) 1098
BstKTI GATC 3 cut(s) 87, 136, 928
BstMAI GTCTC 1 cut(s) 783
BstMBI GATC 3 cut(s) 84, 133, 925
BstMCI CGRYCG 2 cut(s) 691, 1072
BstNSI RCATGY 1 cut(s) 99
BstSCI CCNGG 2 cut(s) 540, 541
BstSFI CTRYAG 1 cut(s) 1063
BstV1I GCAGC 2 cut(s) 1026, 1077
BstV2I GAAGAC 1 cut(s) 615
BstZI CGGCCG 1 cut(s) 688
BsuRI GGCC 2 cut(s) 587, 690
BtgI CCRYGG 1 cut(s) 691
BtsCI GGATG 2 cut(s) 438, 818
BtsIMutI CAGTG 4 cut(s) 80, 116, 578, 952
BveI ACCTGC 1 cut(s) 1089
Cac8I GCNNGC 1 cut(s) 177
CfoI GCGC 1 cut(s) 1098
Cfr10I RCCGGY 2 cut(s) 63, 70
Cfr13I GGNCC 3 cut(s) 321, 469, 585
Cfr9I CCCGGG 1 cut(s) 541
CseI GACGC 1 cut(s) 288
Csp6I GTAC 5 cut(s) 47, 341, 772, 990, 1151
CviAII CATG 3 cut(s) 96, 249, 563
CviQI GTAC 5 cut(s) 47, 341, 772, 990, 1151
DdeI CTNAG 2 cut(s) 185, 581
DpnI GATC 3 cut(s) 86, 135, 927
DpnII GATC 3 cut(s) 84, 133, 925
DraIII CACNNNGTG 1 cut(s) 646
EaeI YGGCCR 1 cut(s) 688
EagI CGGCCG 1 cut(s) 688
Eam1104I CTCTTC 4 cut(s) 249, 732, 1044, 1083
EarI CTCTTC 4 cut(s) 249, 732, 1044, 1083
EclXI CGGCCG 1 cut(s) 688
Eco130I CCWWGG 1 cut(s) 428
Eco47I GGWCC 2 cut(s) 321, 469
Eco52I CGGCCG 1 cut(s) 688
Eco57I CTGAAG 1 cut(s) 1107
Eco88I CYCGRG 1 cut(s) 541
EcoO109I RGGNCCY 2 cut(s) 321, 469
EcoT14I CCWWGG 1 cut(s) 428
ErhI CCWWGG 1 cut(s) 428
FaeI CATG 3 cut(s) 99, 252, 566
FaqI GGGAC 3 cut(s) 17, 217, 664
FatI CATG 3 cut(s) 95, 248, 562
FauNDI CATATG 1 cut(s) 1129
FblI GTMKAC 1 cut(s) 567
Fnu4HI GCNGC 2 cut(s) 1015, 1066
FokI GGATG 2 cut(s) 445, 825
Fsp4HI GCNGC 2 cut(s) 1015, 1066
FspBI CTAG 5 cut(s) 164, 314, 347, 423, 473
FspI TGCGCA 1 cut(s) 1097
GlaI GCGC 1 cut(s) 1097
GluI GCNGC 2 cut(s) 1015, 1066
GsaI CCCAGC 1 cut(s) 710
HaeIII GGCC 2 cut(s) 587, 690
HapII CCGG 4 cut(s) 64, 71, 402, 542
HgaI GACGC 1 cut(s) 288
HhaI GCGC 1 cut(s) 1098
Hin1I GRCGYC 1 cut(s) 280
Hin1II CATG 3 cut(s) 99, 252, 566
Hin6I GCGC 1 cut(s) 1096
HinP1I GCGC 1 cut(s) 1096
HindIII AAGCTT 1 cut(s) 524
HinfI GANTC 7 cut(s) 195, 230, 353, 391, 652, 890, 1000
HpaII CCGG 4 cut(s) 64, 71, 402, 542
HphI GGTGA 4 cut(s) 277, 362, 618, 1145
Hpy166II GTNNAC 4 cut(s) 93, 510, 568, 942
Hpy188I TCNGA 4 cut(s) 133, 278, 298, 703
Hpy188III TCNNGA 3 cut(s) 388, 641, 1030
Hpy8I GTNNAC 4 cut(s) 93, 510, 568, 942
Hpy99I CGWCG 1 cut(s) 452
HpyAV CCTTC 4 cut(s) 217, 298, 448, 977
HpyCH4III ACNGT 3 cut(s) 111, 956, 994
HpyCH4IV ACGT 1 cut(s) 304
HpyCH4V TGCA 4 cut(s) 330, 444, 636, 1065
HpyF3I CTNAG 2 cut(s) 185, 581
HpySE526I ACGT 1 cut(s) 304
Hsp92I GRCGYC 1 cut(s) 280
Hsp92II CATG 3 cut(s) 99, 252, 566
HspAI GCGC 1 cut(s) 1096
KpnI GGTACC 1 cut(s) 775
Kzo9I GATC 3 cut(s) 84, 133, 925
LmnI GCTCC 1 cut(s) 616
Lsp1109I GCAGC 2 cut(s) 1026, 1077
LweI GCATC 2 cut(s) 803, 973
MaeI CTAG 5 cut(s) 164, 314, 347, 423, 473
MaeII ACGT 1 cut(s) 304
MaeIII GTNAC 3 cut(s) 305, 350, 976
MalI GATC 3 cut(s) 86, 135, 927
MboI GATC 3 cut(s) 84, 133, 925
MboII GAAGA 7 cut(s) 50, 190, 266, 615, 749, 1061, 1100
MluCI AATT 7 cut(s) 54, 140, 239, 259, 483, 858, 1078
MlyI GAGTC 3 cut(s) 239, 347, 646
MmeI TCCRAC 1 cut(s) 184
MseI TTAA 4 cut(s) 362, 681, 831, 900
MslI CAYNNNNRTG 2 cut(s) 98, 561
MspA1I CMGCKG 1 cut(s) 1068
MspI CCGG 4 cut(s) 64, 71, 402, 542
MspR9I CCNGG 2 cut(s) 542, 543
Mva1269I GAATGC 3 cut(s) 446, 636, 1043
NciI CCSGG 2 cut(s) 542, 543
NdeI CATATG 1 cut(s) 1129
NdeII GATC 3 cut(s) 84, 133, 925
NlaIII CATG 3 cut(s) 99, 252, 566
NlaIV GGNNCC 2 cut(s) 773, 885
NmuCI GTSAC 1 cut(s) 350
NsbI TGCGCA 1 cut(s) 1097
NspI RCATGY 1 cut(s) 99
OliI CACNNNNGTG 1 cut(s) 98
PaqCI CACCTGC 1 cut(s) 1089
PciI ACATGT 1 cut(s) 95
PcsI WCGNNNNNNNCGW 1 cut(s) 207
PctI GAATGC 3 cut(s) 446, 636, 1043
PfeI GAWTC 4 cut(s) 195, 391, 890, 1000
PflMI CCANNNNNTGG 1 cut(s) 594
PkrI GCNGC 2 cut(s) 1016, 1067
PleI GAGTC 3 cut(s) 238, 347, 646
PpsI GAGTC 3 cut(s) 238, 347, 646
PpuMI RGGWCCY 2 cut(s) 321, 469
PscI ACATGT 1 cut(s) 95
Psp5II RGGWCCY 2 cut(s) 321, 469
PspFI CCCAGC 1 cut(s) 706
PspN4I GGNNCC 2 cut(s) 773, 885
PspPI GGNCC 3 cut(s) 321, 469, 585
PspPPI RGGWCCY 2 cut(s) 321, 469
PstI CTGCAG 1 cut(s) 1067
RsaI GTAC 5 cut(s) 48, 342, 773, 991, 1152
RsaNI GTAC 5 cut(s) 47, 341, 772, 990, 1151
RseI CAYNNNNRTG 2 cut(s) 98, 561
SaqAI TTAA 4 cut(s) 362, 681, 831, 900
SatI GCNGC 2 cut(s) 1015, 1066
Sau3AI GATC 3 cut(s) 84, 133, 925
Sau96I GGNCC 3 cut(s) 321, 469, 585
SchI GAGTC 3 cut(s) 239, 347, 646
ScrFI CCNGG 2 cut(s) 542, 543
SfaNI GCATC 2 cut(s) 803, 973
SfcI CTRYAG 1 cut(s) 1063
SinI GGWCC 2 cut(s) 321, 469
SmaI CCCGGG 1 cut(s) 543
SmiMI CAYNNNNRTG 2 cut(s) 98, 561
Sse9I AATT 7 cut(s) 54, 140, 239, 259, 483, 858, 1078
SsiI CCGC 4 cut(s) 412, 881, 987, 1068
SspI AATATT 1 cut(s) 221
SspMI CTAG 5 cut(s) 164, 314, 347, 423, 473
StyD4I CCNGG 2 cut(s) 540, 541
StyI CCWWGG 1 cut(s) 428
TaaI ACNGT 3 cut(s) 111, 956, 994
TaiI ACGT 1 cut(s) 307
TaqI TCGA 4 cut(s) 5, 27, 210, 1072
TasI AATT 7 cut(s) 54, 140, 239, 259, 483, 858, 1078
TatI WGTACW 1 cut(s) 46
TfiI GAWTC 4 cut(s) 195, 391, 890, 1000
Tru1I TTAA 4 cut(s) 362, 681, 831, 900
Tru9I TTAA 4 cut(s) 362, 681, 831, 900
TscAI CASTG 4 cut(s) 87, 116, 585, 959
TseFI GTSAC 1 cut(s) 350
TseI GCWGC 2 cut(s) 1014, 1065
Tsp45I GTSAC 1 cut(s) 350
TspDTI ATGAA 5 cut(s) 261, 551, 678, 936, 1116
TspGWI ACGGA 1 cut(s) 737
TspMI CCCGGG 1 cut(s) 541
TspRI CASTG 4 cut(s) 87, 116, 585, 959
Van91I CCANNNNNTGG 1 cut(s) 594
VpaK11BI GGWCC 2 cut(s) 321, 469
XapI RAATTY 3 cut(s) 54, 259, 858
XceI RCATGY 1 cut(s) 99
XmaI CCCGGG 1 cut(s) 541
XmiI GTMKAC 1 cut(s) 567
XspI CTAG 5 cut(s) 164, 314, 347, 423, 473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.